Raw GeoChip (Microarray) intensities and normalized data are available at NCBI's GEO database under the accession number GSE77866. Genbank ID Gene name Gene category Sub-category1 Sub-category2 Organism Lineage AK1C AK2C AK3C AK4C AK5C AK6C AK1H AK2H AK3H AK4H AK5H AK6H 67540332 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 1901.7581 1789.5899 816.6538 1098.8839 1980.2666 1148.6429 1181.6284 1174.4291 1199.0716 1341.4256 1918.1003 935.1043 146323153 ABC_multidrug_fungi Fungi function metal resistance Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 1129.0383 479.5418 1183.6716 744.5669 726.4258 353.7422 577.0709 953.9176 84501125 pstB Stress Phosphate limitation Oceanicola batsensis HTCC2597 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola batsensis; 1549.0125 1809.9653 2426.5674 1513.5765 1461.8181 924.8968 1356.2397 3248.811 1449.547 1545.9838 2064.0258 2297.9529 296394412 CysJ Sulphur sulfite reductase Segniliparus rotundus DSM 44985 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Segniliparaceae;genus:Segniliparus;species:Segniliparus rotundus; 4780.9576 3841.1987 4268.9093 5650.9139 2690.415 5207.5776 5001.8639 4774.5303 4137.4866 5462.0297 3768.271 3902.2597 195978904 tutFDG Organic Remediation Aromatics BTEX and related aromatics Streptococcus equi subsp. zooepidemicus MGCS10565 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus;species:Streptococcus equi; 862.0445 800.6402 749.5129 695.6836 1063.5333 1195.106 685.9709 682.9624 958.7257 627.2366 89902628 hly virulence hemolysin Rhodoferax ferrireducens T118 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Albidiferax;species:Albidiferax ferrireducens; 1406.2406 1390.5568 1672.7969 892.8869 1664.3249 1177.4039 1197.6753 2597.2017 1482.5485 1474.3175 2170.3827 1120.9716 154508996 obgE Stress Radiation stress Actinomyces odontolyticus ATCC 17982 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Actinomyces;species:Actinomyces odontolyticus; 6272.3858 4301.2113 6398.9148 4190.429 4903.0686 4501.6034 4368.2068 9972.4559 5069.8734 5067.815 6001.3219 5247.8307 119491468 tre_fun soil_benifit Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 1064.4827 2090.8494 1188.6466 1079.5019 2373.6959 1662.8401 938.1557 1881.7302 1762.5889 1832.3697 675.8841 924.9423 77361354 sigma_24 Stress Sigma factors Pseudoalteromonas haloplanktis TAC125 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Pseudoalteromonadaceae;genus:Pseudoalteromonas;species:Pseudoalteromonas haloplanktis; 4173.67 3259.8769 3798.4115 4095.4778 5239.7521 3852.9491 3111.3795 3124.5969 3071.8129 2941.187 8001.5864 4181.198 56964354 pstA Stress Phosphate limitation Bacillus clausii KSM-K16 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus clausii; 565.4358 876.3247 641.453 766.9381 697.0651 971.1417 952.7974 598.5442 1000.9931 756.0133 966.6887 120599747 ArsC Metal Resistance Arsenic Shewanella sp. W3-18-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella; 1061.7425 3157.3503 2230.1681 972.7023 2857.0503 2466.591 2072.3375 978.7273 2467.6757 2224.5689 1025.1058 1763.6455 158312217 pstC Stress Phosphate limitation Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 5043.0553 4393.907 4916.1417 5867.2024 4445.6715 4731.833 4598.1505 4926.2513 5049.7789 4701.1143 5625.4685 4678.0413 315590591 cat_bac soil_benifit Intrasporangium calvum DSM 43043 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Intrasporangiaceae;genus:Intrasporangium;species:Intrasporangium calvum; 4890.0816 3709.9695 2818.1158 3705.427 4275.015 2729.1636 4813.7219 2126.297 2406.3324 3247.304 2869.5467 3618.0481 239804324 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Variovorax;species:Variovorax paradoxus; 998.5033 1472.4023 1042.9755 1189.0273 14856.6914 915.2351 9701.2227 602.4935 938.5315 953.6148 797.4726 1185.0605 71402608 nasA Nitrogen Assimilatory N reduction Synechococcus sp. UW92 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 5852.9489 3615.8147 3159.5611 4935.2182 5426.0295 3458.4471 4338.4416 4025.3121 4393.0003 3161.9477 4617.849 3084.876 21221778 ppx Phosphorus Phosphorus utilization Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 5296.2205 8971.8803 6615.0443 7656.6699 5560.8128 10155.6485 7218.5928 7520.2514 8981.2367 10191.4734 4852.6576 8998.1351 119898765 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 6965.8416 8446.9125 7745.0386 6742.5655 15143.8722 9423.4933 9000.8023 8252.3662 11001.0225 11112.2588 5065.8039 7040.6026 197737627 akbF Organic Remediation Aromatics BTEX and related aromatics Mycobacterium tuberculosis str. Haarlem superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium tuberculosis; 1433.6022 2160.4365 1924.2137 1668.564 995.5083 2536.2873 1866.814 1933.9722 1685.4031 2467.0819 1549.4428 1813.4253 118034411 mauAB Organic Remediation Herbicides related compound Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 1089.3593 1102.6557 1269.7769 1044.8746 1521.9818 1123.9791 761.9155 1075.1852 917.0558 1443.8066 737.15 60476006 rubisco Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 2396.2815 2086.4915 3138.5224 2840.579 4361.4137 1834.4336 3784.854 2257.9068 2177.6871 2441.6224 1829.5456 2572.9066 3851634 phospholipase_C_fungi Fungi function carbon degradation Magnaporthe grisea superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe; 1123.0878 3041.8136 2385.2462 1732.4082 1469.5157 3215.2429 2169.1462 1935.1585 3024.39 3017.4873 685.3258 3059.9792 194292809 norB Nitrogen Denitrification Cupriavidus taiwanensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus; 2690.1668 2125.9807 2087.5648 2480.2656 2898.8372 2313.4984 2544.3832 1308.7987 2384.6421 1876.9685 2675.8123 2539.4271 115374468 pcpB Organic Remediation Herbicides related compound Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 5283.7285 8391.3039 5531.7654 8030.1055 4646.5651 10734.1876 6775.8764 5379.1508 6880.2695 7626.2049 5380.382 9398.9137 257054296 sped_bac soil_benifit Saccharomonospora viridis DSM 43017 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharomonospora;species:Saccharomonospora viridis; 981.7666 501.4463 655.1804 693.7512 868.5538 681.4233 936.3381 502.1842 814.6707 752.8048 218131151 catB Organic Remediation Aromatics BTEX and related aromatics Bacteroides eggerthii DSM 20697 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides eggerthii; 1747.2464 2292.5386 2126.3852 1728.7372 966.6519 2393.7987 3503.1796 2602.8786 2074.0698 1903.7903 1228.3299 901.7759 116226331 exaA Organic Remediation Chlorinated solvents Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 640.4788 440.9179 584.4437 598.2964 640.1534 874.57 516.1061 595.3393 519.8381 240171888 pstA Stress Phosphate limitation Mycobacterium kansasii ATCC 12478 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium kansasii; 3562.1646 1482.5963 2316.3436 3518.7024 1931.2941 2154.9618 2943.3292 2528.8609 2015.0214 2402.8301 2676.7973 2905.8061 56552060 phoB Stress Phosphate limitation Zymomonas mobilis subsp. mobilis ZM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Zymomonas;species:Zymomonas mobilis; 677.2699 641.9843 634.4886 688.8201 677.4301 989.85 628.8688 698.3866 681.8122 734.4321 569.0685 91977732 fnr Stress Oxygen stress Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 758.3606 1418.8835 1178.5271 666.7407 1841.8241 839.9302 1078.1785 951.9284 989.0063 1360.0847 1334.2784 951.1986 56479167 ppk Phosphorus Phosphorus utilization Azoarcus sp. EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 2481.7378 2664.1115 1570.2354 2792.9801 4089.4391 2231.1192 4766.8316 1412.2055 2402.1816 1800.188 2071.5455 2083.3483 34017186 dsrB Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 1174.5604 2240.7529 1332.4275 1463.0189 1791.3317 1311.5169 3202.4187 790.026 1605.4215 1204.0671 1991.976 1015.6274 1617425 dmsA Organic Remediation Others Rhodobacter capsulatus superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter; 1328.5751 3478.9852 1923.792 2069.5316 2543.2131 3526.1243 2905.9936 3169.3948 3213.7202 3513.2442 1702.023 3560.9902 225169785 sigma_24 Stress Sigma factors Dethiobacter alkaliphilus AHT 1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Syntrophomonadaceae;genus:Dethiobacter;species:Dethiobacter alkaliphilus; 1419.8207 1300.6581 1110.3078 1537.5746 1005.5948 1655.3619 1137.8466 1031.6956 1150.449 923.4542 975.9755 861.2654 78459398 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas putida superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 791.2698 930.0791 939.876 801.4285 1198.8241 959.401 812.6197 1487.5265 745.6368 734.6407 1615.4384 1290.1404 113473781 proO Organic Remediation Aromatics Other aromatics Sphingomonas sp. KA1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 1823.3672 1630.257 2619.6373 2151.8949 3076.2226 1591.7678 2156.0013 1700.1419 1739.8385 1940.6284 18639.8873 2721.573 88811045 per_bac soil_benifit Nitrococcus mobilis Nb-231 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Nitrococcus;species:Nitrococcus mobilis; 1999.478 2833.8551 3114.416 2302.6224 3574.0241 2057.0878 2399.0669 1829.1856 2066.8708 1827.1326 3512.2048 2568.7045 39935214 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 6565.7069 5047.0331 4987.0726 7933.9352 3500.2715 4152.7629 3846.9194 3598.5397 5028.7526 5123.0777 5261.6044 3771.5758 227327217 acc soil_benifit Pectobacterium carotovorum subsp. carotovorum WPP14 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium carotovorum; 2284.7129 1563.3331 1801.0933 1991.0859 5441.5384 2053.9769 1651.8619 1860.0636 1445.2136 1720.6159 3413.6799 2006.3144 259503726 xylA Carbon cycling Carbon degradation Hemicellulose Lactobacillus antri DSM 16041 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus antri; 1346.4871 1399.706 1728.4977 1428.0012 2080.9797 1465.791 1290.9913 1323.1422 1225.6195 1283.455 1033.8267 1073.2517 77456479 nmoA Organic Remediation Aromatics Nitoaromatics Pseudomonas fluorescens PfO-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 2405.0663 1708.535 2016.9468 1315.0501 966.5879 1090.5319 4229.366 959.2987 1433.7945 1553.9112 1260.2314 257797930 hly virulence hemolysin Desulfohalobium retbaense DSM 5692 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfohalobiaceae;genus:Desulfohalobium;species:Desulfohalobium retbaense; 744.3508 436.4973 579.1387 680.8355 563.7043 548.0119 513.7297 630.5694 107784967 dsrA Sulphur sulfite reductase Desulfovibrio desulfuricans superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio; 1873.9398 1793.1196 1900.6016 2059.1489 1565.5837 1758.665 1338.2315 1523.2501 1566.0364 1908.2457 1685.4701 1820.7996 94311053 sigma_38 Stress Sigma factors Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 6266.3144 4869.3764 5530.5004 8200.4342 8208.6257 5490.8421 4614.0597 3668.1635 5728.1082 6765.8411 8993.5142 4570.4826 89070845 amyA Carbon cycling Carbon degradation Starch Oceanicola granulosus HTCC2516 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola granulosus; 524.1044 1062.6527 856.2885 740.4471 1313.365 1131.2637 922.883 598.4506 1022.0777 880.6867 881.0542 1167.5929 149808743 Mex Antibiotic resistance transporter Moritella sp. PE36 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Moritellaceae;genus:Moritella; 683.3452 907.7796 645.4401 85088386 sulfate_transporter Fungi function Sulfur Neurospora crassa OR74A superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Sordariaceae;genus:Neurospora;species:Neurospora crassa; 944.3577 1157.8244 463.5578 542.9463 698.8667 10580737 atzA Organic Remediation Herbicides related compound Halobacterium sp. NRC-1 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halobacterium;species:Halobacterium salinarum; 2201.4864 3465.4653 2307.1837 2606.3513 3990.3376 3078.3181 2775.0495 1844.4612 2860.839 3232.8435 2132.7121 2390.2801 38678117 HcaB Organic Remediation Aromatics Aromatic carboxylic acid Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1434.4216 3712.5052 1862.8716 1512.2615 2331.8712 1930.9764 2135.8137 1252.5017 1761.3891 1692.0186 2122.3575 229209425 B_lactamase_C Antibiotic resistance Beta-lactamases Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiopsaceae;genus:Nocardiopsis;species:Nocardiopsis dassonvillei; 1345.1237 3682.7132 2584.3209 2234.217 1621.5522 3485.518 3769.5756 2258.2215 4262.3691 3827.5761 1049.1063 3254.5254 83756282 endochitinase Carbon cycling Carbon degradation Chitin Salinibacter ruber DSM 13855 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Rhodothermaceae;genus:Salinibacter;species:Salinibacter ruber; 2446.1557 1758.0521 2332.148 2095.3926 1418.9316 1121.9758 1573.807 1692.5525 1561.3419 1433.0351 2395.6133 1759.0315 22750428 Pg_Oomycetes soil_borne_pathogen oomycete carbon degradation Phytophthora cinnamomi superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 5316.7719 2051.5004 3564.5294 5173.5004 3101.5336 2192.0534 3795.3836 2208.715 2304.4741 2822.8673 3042.4998 3267.2828 145702072 ABC_transporter_I Bioleaching other category Metallosphaera sedula DSM 5348 736.0899 1016.1356 898.3248 606.817 733.8441 612.6975 752.3582 8819.7959 966.2214 1082.1915 71737205 type_III_secretion virulence secretion Pseudomonas syringae pv. phaseolicola 1448A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas savastanoi; 1860.212 4851.4603 1825.0544 1797.8412 34492.6943 23269.7197 3669.1194 1807.6521 2907.9822 2299.4958 2997.3095 2010.4708 126729207 atzB Organic Remediation Herbicides related compound Sagittula stellata E-37 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 7473.9854 4417.8184 6359.004 7582.758 5223.7502 6755.0224 5315.2691 4416.1591 7056.3665 6439.993 8504.4213 6245.6781 325519510 impG soil_borne_pathogen secretion system type IV Burkholderia sp. TJI49 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1755.1849 734.2005 1160.5127 1240.4068 685.7664 1251.8263 1087.5152 1317.4653 827.2376 988.0521 1172.8936 17428456 pcaG Organic Remediation Aromatics Other aromatics Ralstonia solanacearum superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 2514.8216 2082.1718 2943.2281 2048.5881 2161.406 1695.5345 1786.9582 4126.3102 2174.6584 2254.3052 3648.9769 2408.1596 238493445 pec_CDeg Fungi function carbon degradation Aspergillus flavus NRRL3357 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus flavus; 1080.897 560.5844 1135.9905 786.2126 661.7559 726.3178 637.9315 725.1929 704.5136 830.7934 218751134 CODH Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 4052.5241 2675.669 4878.6517 2345.8929 2585.929 3505.1706 2706.5837 4654.6012 3431.8582 3875.6401 4638.7185 4088.848 78049837 xylanase Carbon cycling Carbon degradation Hemicellulose Xanthomonas campestris pv. vesicatoria str. 85-10 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas euvesicatoria; 1464.201 1510.8083 1250.9046 1442.2809 14857.5004 1528.9514 1592.6411 1613.9958 1630.6764 1643.9694 1008.2885 1492.6239 88807282 obgE Stress Radiation stress Synechococcus sp. WH 7805 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 1712.497 2353.8303 1233.8789 1343.0286 1803.8861 1909.9628 1431.5074 1588.6737 2273.2666 1271.7581 978.2578 1514.4995 62421696 nifH Nitrogen Nitrogen fixation Oscillatoria sp. PCC 6506 superkingdom:Bacteria;phylum:Cyanobacteria;order:Oscillatoriales;genus:Oscillatoria; 372.735 375.2157 467.7788 320.8511 92394501 katE Stress Oxygen stress Psychrobacter cryohalolentis K5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Psychrobacter;species:Psychrobacter cryohalolentis; 1567.2267 3462.3689 2876.2592 2569.8337 3031.7814 3481.5546 3245.3059 2945.1632 3561.9652 4131.4412 1161.5415 3980.8568 253756985 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria; 2263.3555 1153.8639 1473.0825 1823.0584 1857.5036 1090.4031 970.6107 1226.1265 880.811 1084.3404 2755.0935 1406.1513 225185314 amyX Carbon cycling Carbon degradation Starch Bacillus subtilis subsp. subtilis str. 168 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus subtilis; 3159.8808 2977.1579 3773.6653 2351.5911 2103.6174 2590.8179 2971.7218 2874.7647 3207.255 2950.0866 2549.8753 3573.6789 133776087 cda Carbon cycling Carbon degradation Starch Collinsella aerofaciens ATCC 25986 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Coriobacteriales;family:Coriobacteriaceae;genus:Collinsella;species:Collinsella aerofaciens; 2411.7287 3421.6055 2493.3473 3470.9117 2968.722 3313.6703 2927.3856 1881.0524 3474.7263 3285.6273 2597.7083 3269.631 241764698 phzF soil_benifit Acidovorax delafieldii 2AN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax delafieldii; 3165.1731 3936.8507 3194.9356 3292.1864 5440.325 3736.3499 3174.7181 3223.8883 3845.8264 3822.4208 3126.706 3629.5696 160917538 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 778.8113 1828.9517 1049.969 985.5986 896.6518 1315.1114 1158.9862 1348.7791 1931.5101 1103.0107 1089.0592 1342.1997 115401580 chitin_synthase Fungi function major biomolecule Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 312.1684 482.1666 269.6658 381.0472 340.6883 4886552 PobA Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas sp. superkingdom:Bacteria;phylum:Proteobacteria; 15471.2126 14052.3965 12725.932 16329.6823 13855.813 12713.5327 17171.252 9240.5529 13436.8617 10916.7566 17685.6278 12073.831 159028642 mer Metal Resistance Mercury Microcystis aeruginosa PCC 7806 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Microcystis;species:Microcystis aeruginosa; 861.0421 2206.8577 1653.6339 2139.2613 1660.0732 1609.2959 1603.7798 1776.1716 1467.975 798.4576 1141.3641 255263046 obgE Stress Radiation stress Thalassiobium sp. R2A62 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Thalassobium; 2220.3722 2702.4156 4377.97 1781.2672 1138.0821 2938.5217 2304.7014 3002.0533 3165.1325 2899.5808 3507.7636 124109821 mcrA Carbon cycling Methane Methane production uncultured euryarchaeote superkingdom:Archaea;phylum:Euryarchaeota; 3213.3816 2227.73 2453.2329 2653.1695 4278.4467 3335.8205 2295.1008 2164.5344 3442.0743 2541.2383 1349.162 219996989 CopA Metal Resistance Copper Thioalkalivibrio sp. HL-EbGR7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Thioalkalivibrio;species:Thioalkalivibrio sulfidophilus; 1788.6984 554.825 1179.4576 2002.5097 960.8124 1047.9572 1790.2961 5215.3921 1117.8319 1327.1884 1219.0805 1285.3616 182439353 TerD Metal Resistance Tellurium Streptomyces griseus subsp. griseus NBRC 13350 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces griseus; 2689.8041 3281.8324 3495.4813 2995.32 2346.0909 3010.5213 3172.4241 3965.275 3241.2932 3316.201 3024.4333 3818.5542 93357964 nbaC Organic Remediation Aromatics Nitoaromatics Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 2395.9592 1628.0526 1326.6117 2667.8121 2625.4407 1448.8306 2340.9702 1336.3359 1552.081 1827.8361 2589.9724 1483.6429 91779487 fnr Stress Oxygen stress Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 9123.2163 2095.3603 4719.4879 8756.1428 3633.6898 3247.4737 4681.4931 5467.282 3481.4943 4652.7245 5388.8387 5113.1164 209495089 sigma_70 Stress Sigma factors Arthrospira maxima CS-328 superkingdom:Bacteria;phylum:Cyanobacteria;order:Oscillatoriales;genus:Arthrospira;species:Arthrospira maxima; 1333.2966 722.5157 1347.505 1026.0062 1426.724 1388.0033 688.1793 1051.133 1108.4662 749.4195 2070.5684 901.3913 14625485 rd Organic Remediation Chlorinated solvents Desulfitobacterium frappieri superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium; 734.8407 759.6876 709.1634 853.0271 623.5401 1118.4163 622.5925 630.1156 860.4836 1046.542 15972.8321 887.3294 53804857 vanA Carbon cycling Carbon degradation Others Methylococcus capsulatus str. Bath superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae;genus:Methylococcus;species:Methylococcus capsulatus; 1094.3427 386.3881 714.4766 382.7051 493.8934 475.0203 941.7885 56419211 AceA Carbon cycling Carbon degradation Others Geobacillus kaustophilus HTA426 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus;species:Geobacillus kaustophilus; 378.3363 503.1271 390.401 440.8405 516.0181 754.1904 719.8774 597.3044 206590549 ChrA Metal Resistance Chromium Ralstonia solanacearum superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 1847.1021 1279.6839 1597.1625 699.7655 1379.1791 1344.1042 1465.9242 1582.5662 1209.1478 663.9919 1397.0742 83373543 CopA Metal Resistance Copper Rhodobacter sphaeroides ATCC 17029 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 1176.9379 1570.1122 1407.3204 1257.5424 24830.2935 1342.7007 1186.2739 2344.3918 1407.8206 1393.3719 1390.4278 187721576 atzA Organic Remediation Herbicides related compound Clostridium botulinum B str. Eklund 17B superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium botulinum; 1087.2101 986.707 1118.0574 752.9529 1696.8595 818.1239 916.4482 792.1399 664.1641 755.8346 1797.3767 912.4184 145592995 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Salinispora tropica CNB-440 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora tropica; 954.5796 701.327 628.4696 454.3837 886.8092 618.141 468.2761 674.533 187424591 phzF soil_benifit Akkermansia muciniphila ATCC BAA-835 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobiaceae;genus:Akkermansia;species:Akkermansia muciniphila; 1174.7887 1727.7503 2130.1946 1159.4544 1145.9523 2097.8138 1464.6334 1841.7377 2069.154 1868.0577 1514.3909 1936.0964 145572506 sigma_32 Stress Sigma factors Pseudomonas stutzeri A1501 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas stutzeri; 795.9442 643.7416 679.0304 836.4434 705.2554 384.6234 452.1294 542.1513 115254776 ChnA Organic Remediation Other Hydrocarbons Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1126.1638 336.7866 721.3801 781.0381 336.525 502.9474 475.9029 768.8353 615.0856 55229208 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Haloarcula marismortui ATCC 43049 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloarcula;species:Haloarcula marismortui; 3662.8934 1477.066 2608.2529 3362.1397 2663.7579 1961.921 1959.9981 1948.8484 2648.8866 2739.1747 2758.1926 2339.1408 116193471 phospholipase_C_fungi Fungi function carbon degradation Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 1507.1306 2832.5044 2211.5575 1843.1253 2000.724 3123.3515 2445.7163 2566.3479 3250.7871 2983.988 2646.2098 77545175 fnr Stress Oxygen stress Pelobacter carbinolicus DSM 2380 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter carbinolicus; 2519.3079 2191.4009 2528.0676 2265.9541 3452.5314 2669.5329 2085.8724 2818.3951 2171.2685 2027.5369 4102.4653 3119.1382 224283983 ahpF Stress Oxygen stress Bifidobacterium bifidum NCIMB 41171 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium bifidum; 1089.9029 725.4337 662.5665 1599.1038 1316.9909 2175.107 1019.8411 1071.968 1109.8645 1328.0966 213404802 sulfate_transporter Fungi function Sulfur Schizosaccharomyces japonicus yFS275 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Schizosaccharomycetes;order:Schizosaccharomycetales;family:Schizosaccharomycetaceae;genus:Schizosaccharomyces;species:Schizosaccharomyces japonicus; 1117.5268 2090.1868 2191.2313 1072.0916 979.0135 2297.8242 1841.2009 1806.9984 2317.3346 1758.3026 2058.9459 118468184 adpB Organic Remediation Pesticides related compound Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 2146.1587 2186.4696 1979.6382 2038.8903 3159.9479 1891.417 1943.1598 1330.5137 2227.7892 1806.002 2844.9215 2553.5302 262199106 cap virulence capsule Haliangium ochraceum DSM 14365 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Haliangiaceae;genus:Haliangium;species:Haliangium ochraceum; 712.6371 767.1146 1322.4244 492.5349 1522.0146 558.9423 1129.0604 522.9167 644.6871 664.5824 885.4756 15890349 oxyR Stress Oxygen stress Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 923.3764 870.1891 950.388 1640.3334 1276.0555 882.634 755.0524 1288.7218 1454.9549 962.0171 1155.7007 152984294 cellobiase Carbon cycling Carbon degradation Cellulose Pseudomonas aeruginosa PA7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 5540.1107 1260.2897 3028.8511 4673.1983 2489.7473 1923.4833 2635.5945 1524.7026 2872.5928 3672.4666 5168.0766 2408.9698 110631028 nifH Nitrogen Nitrogen fixation uncultured soil bacterium superkingdom:Bacteria; 1535.5474 1749.2368 1971.635 1497.8038 1557.8026 1622.2682 1686.4102 1753.5592 1723.2446 1973.3055 1441.1699 1735.1409 90419526 ppx Phosphorus Phosphorus utilization Aurantimonas sp. SI85-9A1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Aurantimonas;species:Aurantimonas manganoxydans; 1055.0801 1209.9948 880.0169 870.2448 831.0013 666.2596 642.7248 581.8061 544.2081 1677.3978 824.4627 313466585 sped_bac soil_benifit Thermaerobacter subterraneus DSM 13965 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XVII. Incertae Sedis;genus:Thermaerobacter;species:Thermaerobacter subterraneus; 1991.8485 1951.3694 2158.5175 1967.6084 2068.3905 2059.2415 1485.2454 2294.2317 1495.2886 1829.3883 2491.1111 2377.9621 283813644 sigma_24 Stress Sigma factors Kribbella flavida DSM 17836 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Kribbella;species:Kribbella flavida; 2871.8655 2762.4458 2912.9859 2922.1615 1123.4662 3197.101 5431.1298 2090.8315 3265.5463 2635.5613 2961.1525 1780.9895 218288542 pstB Stress Phosphate limitation Alicyclobacillus acidocaldarius LAA1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Alicyclobacillaceae;genus:Alicyclobacillus;species:Alicyclobacillus acidocaldarius; 2387.0267 461.7786 1183.6304 1976.3337 1134.7282 815.5215 1060.0899 649.4547 906.9046 1084.0278 1910.4845 1267.3859 222436418 sigma_24 Stress Sigma factors Labrenzia alexandrii DFL-11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia alexandrii; 3053.1343 3135.191 2264.3795 3068.862 1526.0909 3029.426 1980.2316 1911.6399 2001.1125 2780.0551 1772.0788 1806.7651 220711137 ppx Phosphorus Phosphorus utilization Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 2389.7605 3436.5865 3688.963 2175.3555 2565.6233 3210.0072 2906.9246 3814.7402 3869.9866 2795.6261 1923.4578 4245.2589 256759738 sigma_24 Stress Sigma factors Thiomonas intermedia K12 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Thiomonas;species:Thiomonas intermedia; 10785.5706 8470.0912 12208.1663 10791.0197 5412.2838 10602.3779 19240.0222 9031.7724 8230.8006 13130.6504 5935.4465 8486.4403 146398104 pstC Stress Phosphate limitation Geobacter uraniireducens Rf4 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter uraniireducens; 2844.7994 3707.4592 3440.3622 3255.8743 861.444 3883.5497 4407.4235 3524.6068 3354.7655 3527.1241 2277.0279 1668.3568 110285730 atzA Organic Remediation Herbicides related compound Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 13875.6034 7338.0935 13042.1948 13144.0901 9289.8881 10149.9053 8981.7273 7960.9316 9316.796 11387.9026 10971.4598 11152.3286 110166093 CopA Metal Resistance Copper Trichodesmium erythraeum IMS101 superkingdom:Bacteria;phylum:Cyanobacteria;order:Oscillatoriales;genus:Trichodesmium;species:Trichodesmium erythraeum; 10611.8088 3475.4045 1568.6651 2544.6166 1392.1987 2991.1828 2947.8141 1686.6456 3003.0142 3043.2483 771.2858 2817.5895 220709732 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 2116.9435 1984.2707 1177.7492 2084.5167 1806.711 1320.7951 1788.7762 2155.7285 1791.222 1502.8087 2298.3858 2087.111 256396763 pstA Stress Phosphate limitation Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 1926.0302 3268.4272 2049.5004 2358.9877 2772.851 2827.6657 2356.3747 1882.2386 2924.3373 3168.4912 1463.9873 2712.4547 29605050 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 1652.6427 2293.3032 1552.6135 1388.6277 2316.021 1703.9101 2179.3891 1020.0028 2215.0918 1527.3246 2170.9352 1682.913 171678633 tre_fun soil_benifit Podospora anserina S mat+ superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Lasiosphaeriaceae;genus:Podospora;species:Podospora anserina; 2699.3679 2101.7698 2562.468 2255.3112 945.4552 3026.4796 3191.0747 1684.4064 2869.0515 3007.6944 10178.9672 1609.7883 227091152 oxyR Stress Oxygen stress Corynebacterium glucuronolyticum ATCC 51867 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium glucuronolyticum; 1051.1982 1370.3089 1255.6736 1024.6844 1432.001 1286.5997 1259.3736 768.4882 1358.3825 1441.5775 1150.6102 1086.5034 157804784 APS_AprA Sulphur adenylylsulfate reductase endosymbiont of Inanidrilus makropetalos superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 4002.1395 5563.3104 5241.5572 4652.9259 7201.2487 4869.7823 4165.8032 4459.7587 6027.3111 4908.5814 4519.0279 5220.4347 110634704 nmoA Organic Remediation Aromatics Nitoaromatics Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 894.6985 830.07 985.8775 1041.1611 639.979 1173.8283 534.3514 85709358 ppx Phosphorus Phosphorus utilization Erythrobacter sp. NAP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 3100.8548 2839.0795 3754.0079 1508.6591 1256.6001 3523.9856 2527.4188 3789.5814 2999.4613 2667.7393 3897.9409 116624615 sigma_24 Stress Sigma factors Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 655.523 701.1082 735.8434 467.7842 578.9853 534.0403 709.2042 550.9018 535.3385 467.9301 811.8153 886.4643 161165499 sigma_24 Stress Sigma factors Sorangium cellulosum 'So ce 56' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Polyangiaceae;genus:Sorangium;species:Sorangium cellulosum; 584.5367 694.4693 553.5491 758.9936 840.9298 545.7305 789.0174 762.8918 456.5441 154251305 pimF Organic Remediation Aromatics Aromatic carboxylic acid Parvibaculum lavamentivorans DS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Parvibaculum;species:Parvibaculum lavamentivorans; 1049.4654 1699.4873 1194.1861 1401.5581 975.4491 2207.1144 1853.302 1250.6376 1929.5065 1858.5662 678.743 1852.1505 3549705 TGB1_Pomovirus soil_borne_pathogen virulence movement protein Beet virus Q superkingdom:Viruses;family:Virgaviridae;genus:Pomovirus; 503.2007 482.2008 38233109 narI Stress Oxygen limitation Corynebacterium diphtheriae NCTC 13129 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium diphtheriae; 503.0424 706.6002 554.3791 1147.6708 691.54 520.9558 658.2348 748.5318 23494032 hrcA Stress Heat shock Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 778.4016 891.7008 941.5916 1126.9502 1454.8031 914.4424 670.0122 867.9506 858.4878 1190.1787 856.7887 115387787 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 618.0872 2188.0496 1953.4671 923.0488 2319.5475 1789.4152 1328.2524 1405.4271 1767.8542 1722.0005 814.9385 1564.6775 302407215 pel_CDeg Fungi function carbon degradation Verticillium albo-atrum VaMs.102 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Plectosphaerellaceae;genus:Verticilium;species:Verticillium albo-atrum; 48041.9007 65252.3828 67660.8919 60522.6963 64986.1972 77184.4512 59632.1536 60652.6375 69930.5219 63500.3827 66138.0516 75186.2195 296414267 rgh_fungi Fungi function carbon degradation Tuber melanosporum Mel28 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Pezizomycetes;order:Pezizales;family:Tuberaceae;genus:Tuber;species:Tuber melanosporum; 733.5512 1199.5969 797.4762 710.8331 1168.8554 749.8933 1403.887 796.4611 920.5455 649.3067 991.2551 605.1159 85713968 gyrB other category gyrB Nitrobacter sp. Nb-311A superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter; 3294.2978 3882.3508 3093.5663 3416.3682 4750.4064 2874.8827 2796.9232 3186.7402 4512.9028 3393.4505 3535.2204 3155.831 258638683 Mex Antibiotic resistance transporter Pantoea sp. At-9b superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pantoea; 4096.4947 3543.1058 3463.5017 4500.5067 2718.058 3723.682 3043.8543 2893.4234 3180.8819 2893.8598 3757.436 3490.9621 161389159 bclA Organic Remediation Aromatics Aromatic carboxylic acid Phaeobacter gallaeciensis BS107 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 1090.6354 662.4234 1214.6141 1322.6878 634.5789 691.412 618.1024 923.7222 713.9012 108765644 pobA Organic Remediation Aromatics Aromatic carboxylic acid Rubrobacter xylanophilus DSM 9941 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Rubrobacterales;family:Rubrobacteraceae;genus:Rubrobacter;species:Rubrobacter xylanophilus; 8842.1186 4792.1565 8374.671 11058.505 5760.1155 6551.587 5516.6175 6273.1966 5617.8393 7778.2808 8968.0962 8008.1289 229314883 pstB Stress Phosphate limitation Lactobacillus rhamnosus LMS2-1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus rhamnosus; 2331.3229 1704.5079 2149.7502 2767.8452 3141.8415 2160.2264 1683.6115 2116.4321 1944.8016 2029.2677 4380.454 2655.9049 229207758 grpE Stress Heat shock Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiopsaceae;genus:Nocardiopsis;species:Nocardiopsis dassonvillei; 3202.7298 1143.9247 1423.3429 2563.3822 2045.1841 2323.9678 3164.7161 1436.3414 1961.576 1795.7438 1814.0978 1715.5274 148557154 nagI Organic Remediation Aromatics Aromatic carboxylic acid Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 5717.4842 3766.2151 5020.6879 4961.6955 5138.3944 4577.2672 3545.9291 3677.2417 3920.6359 4666.4369 6156.5689 4653.1926 71846828 nosZ Nitrogen Denitrification Dechloromonas aromatica RCB superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Dechloromonas;species:Dechloromonas aromatica; 1447.4375 585.1764 644.6538 1166.3442 986.6146 882.0321 746.5168 822.7153 887.381 715.3786 1225.3028 1243.6839 183597670 papC soil_borne_pathogen adherence Providencia stuartii ATCC 25827 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia stuartii; 2199.5387 1493.7206 2318.7281 2310.1013 2150.5232 1912.6101 1428.3072 1707.6345 1565.8733 1924.3813 3396.5504 2557.2929 67901318 pec_CDeg Fungi function carbon degradation Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 4362.246 2509.4551 4156.4754 5008.7602 1638.0533 3905.0569 5305.9208 4711.6849 3107.9945 4817.5302 1869.2823 2153.3421 110819060 PobA Organic Remediation Aromatics Aromatic carboxylic acid Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 2395.4622 3780.4995 2440.031 2872.6175 1939.333 4320.8865 3071.7958 2640.5471 3552.1917 2804.8558 1920.8391 3270.6884 177843627 nrfA Nitrogen Dissimilatory N reduction Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 5984.949 3540.0794 4198.0148 4992.1993 4350.967 3797.3865 3467.6161 3337.8137 3982.7655 4918.0338 4519.1721 4229.1514 85699558 pstC Stress Phosphate limitation Nitrobacter sp. Nb-311A superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter; 1610.519 1499.6331 1937.939 1678.618 1516.5676 3090.0105 3771.7155 1548.7377 1513.0316 1473.3574 84489913 nifH Nitrogen Nitrogen fixation Methanosphaera stadtmanae DSM 3091 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanobacteria;order:Methanobacteriales;family:Methanobacteriaceae;genus:Methanosphaera;species:Methanosphaera stadtmanae; 1444.7242 1378.7445 1545.998 1448.5954 1833.9559 1154.2964 1129.8289 1290.2428 1245.1082 1209.092 1131.0302 1019.723 167728637 sid_arc soil_benifit Halobacterium salinarum R1 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halobacterium;species:Halobacterium salinarum; 3510.222 6458.373 4006.9659 2573.628 5596.343 3543.698 3701.3392 2425.6841 3616.4239 3512.1834 5960.0957 3134.7519 69153333 CopA Metal Resistance Copper Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 5619.6031 5122.9787 2751.8884 5440.8486 4178.2645 4162.32 4018.3993 3368.7885 3868.239 3676.252 7669.8306 3840.7456 256672234 sigma_24 Stress Sigma factors Streptomyces sp. AA4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 1102.3752 915.7565 1129.9507 1331.1255 1330.675 1279.331 867.7801 689.8709 1048.6955 974.3174 995.7237 1434.9068 157370564 cellobiase Carbon cycling Carbon degradation Cellulose Serratia proteamaculans 568 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Serratia;species:Serratia proteamaculans; 3650.9656 1734.1196 2482.2755 1985.8162 2533.4351 2093.6257 2756.0663 2762.9334 1880.8783 3085.625 3384.3215 2677.2016 116609100 pimF Organic Remediation Aromatics Aromatic carboxylic acid Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 819.4373 824.3159 851.3887 887.8051 733.591 1087.9855 1269.9682 599.4059 705.9318 963.2665 858.725 52306656 proV Stress Osmotic stress Mannheimia succiniciproducens MBEL55E superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Basfia;species:Mannheimia succiniciproducens; 3658.7026 2648.3362 3050.3405 3589.7925 1421.4722 3337.8845 3785.3128 3361.9254 2706.7818 3264.7572 3421.9921 2524.3352 149814105 vanA Carbon cycling Carbon degradation Others Plesiocystis pacifica SIR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Nannocystaceae;genus:Plesiocystis;species:Plesiocystis pacifica; 1165.7219 1623.3123 1412.1766 1224.4081 2776.7377 1810.4287 1110.7424 2331.8276 1210.9069 1576.0104 1843.0715 1676.3353 81300844 vanA Carbon cycling Carbon degradation Others Synechococcus elongatus PCC 7942 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus;species:Synechococcus elongatus; 2599.4495 3044.2857 2310.5666 3314.9791 2570.2368 4122.2172 3326.8287 2428.9563 3138.0604 2756.6474 1748.7909 2857.5415 190687698 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Cellvibrio japonicus Ueda107 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Cellvibrio;species:Cellvibrio japonicus; 1318.8367 1436.0478 1298.3179 999.3714 681.5372 796.2877 1251.2757 2338.7068 1009.7298 1433.56 2186.6473 904.6322 160362880 nagG Organic Remediation Aromatics Aromatic carboxylic acid Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 1035.9391 818.0848 1289.8995 1809.1417 877.8439 1205.746 973.7191 712.5543 1390.2889 1224.5687 1674.8032 1181.3939 237797608 cytochrome Energy process Energy process Pseudomonas syringae pv. oryzae str. 1_6 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas coronafaciens; 2183.5542 2081.9424 2909.1766 2438.9128 5453.9 1868.8779 2966.2238 2319.0213 1831.2943 1622.2618 2356.5253 3016.791 148261157 cytochrome_c Bioleaching Electron transport Acidiphilium cryptum JF-5 1455.282 1315.6306 1480.2941 1777.8702 1075.2313 1668.6581 2646.8238 815.2591 1482.4902 1380.7315 994.1861 1156.6757 224601885 iro virulence Iron oxidation Lutiella nitroferrum 2002 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Lutiella;species:Lutiella nitroferrum; 28662.4001 18342.3349 29154.3148 33822.1202 20232.8011 27698.7012 24920.5377 28103.5063 25453.8733 29707.6802 21860.4191 28165.6374 90329402 rd Organic Remediation Chlorinated solvents Photobacterium profundum 3TCK superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Photobacterium;species:Photobacterium profundum; 589.3555 572.0086 480.7215 870.1888 391.8901 339.6364 323.4808 516.2384 16263349 nreB Metal Resistance Nickel Sinorhizobium meliloti 1021 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium meliloti; 5617.4808 8110.2032 4396.6532 4620.86 8954.4749 4478.8848 6730.6034 3961.3532 4786.8275 4210.3433 7610.7061 2891.0576 116688201 pimF Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia cenocepacia HI2424 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia cenocepacia; 1449.6538 747.6822 1381.4401 1386.7922 863.2261 1158.2299 1046.9794 951.4321 969.506 1000.726 836.2964 4101.4405 87331874 arhA Organic Remediation Aromatics Heterocyclic aromatics uncultured bacterium superkingdom:Bacteria; 2519.0483 1962.2346 2163.7032 2112.5967 2371.1491 2105.2172 1847.8269 2870.5605 1735.179 2089.3618 2475.2789 2530.1394 163794005 sox Sulphur Sulphur oxidation alpha proteobacterium BAL199 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 1071.763 1921.9469 1781.4359 1665.5231 983.7913 2518.594 1893.1037 1765.9649 2493.3267 2005.8293 1032.8658 1887.3053 126665572 sped_bac soil_benifit Marinobacter sp. ELB17 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter; 2863.3592 7046.5821 13113.5255 3508.1295 8350.4114 5869.7747 7505.509 6376.8747 4318.8072 9958.1392 6847.5886 7410.4105 256723237 nirK_fungi Fungi function nitrogen Nectria haematococca mpVI 77-13-4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Nectria;species:Nectria haematococca; 766.7961 1144.7529 1235.0711 615.8681 773.3974 1457.1911 1215.6491 1340.4756 1449.6752 1379.5925 1570.5 88941527 mer Metal Resistance Mercury Acidiphilium cryptum JF-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Acidiphilium;species:Acidiphilium cryptum; 1325.9021 1937.1742 1612.5162 1629.0877 1931.8819 1858.0047 1598.663 842.9052 1678.635 2194.319 1148.7604 1048.6845 71736439 xylA Carbon cycling Carbon degradation Hemicellulose Pseudomonas syringae pv. phaseolicola 1448A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas savastanoi; 3983.6254 4631.3709 4721.349 3762.9292 3857.0331 3354.5458 3426.6043 8500.0922 3801.246 4190.2995 7505.9348 3979.5934 146146930 amoA Nitrogen Nitrification Archaea superkingdom:Archaea;phylum:Crenarchaeota; 932.5775 672.259 1026.7494 812.3454 933.2275 1391.3501 1158.3063 773.9786 1199.3883 732.7169 62391709 pcc Carbon cycling Carbon fixation Corynebacterium glutamicum ATCC 13032 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium glutamicum; 452.0934 751.1099 539.6269 566.7574 667.9179 645.8885 456.549 576.3428 647.8662 466.5138 77384103 pimF Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas fluorescens PfO-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 1486.8881 5093.3777 3466.7659 1994.9486 2552.674 3051.8156 3747.8625 4149.2599 2935.8115 4771.3457 1353.9306 3835.9805 254353366 Mex Antibiotic resistance transporter Legionella drancourtii LLAP12 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Legionellales;family:Legionellaceae;genus:Legionella;species:Legionella drancourtii; 1297.9092 2107.1344 1547.3066 1436.7608 1847.5119 1937.1683 1904.7231 1201.4217 1869.5844 2136.8565 1174.9952 2263.9012 23450983 bclA Organic Remediation Aromatics Aromatic carboxylic acid Thauera aromatica superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Thauera; 7436.3078 12240.7152 11189.8644 6559.6488 7807.8022 12252.8042 9385.7202 8865.1087 13659.0419 11823.316 4831.7562 11492.3553 27348390 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 7215.857 3964.5912 6713.9855 7812.8627 6239.8676 5678.1098 6046.7714 3565.495 6124.0555 6950.3332 7760.7397 5475.5405 91687594 nmoA Organic Remediation Aromatics Nitoaromatics Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 1070.1646 2209.5718 1411.9004 920.049 2595.0106 1499.8016 1432.62 1776.6772 1083.3161 8560.5855 1335.6631 56963575 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bacillus clausii KSM-K16 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus clausii; 754.4653 1247.3942 567.0563 732.9683 672.0006 1281.6641 2334.2257 523.5974 1146.5932 878.1743 740.8707 472.0891 222102561 nmoA Organic Remediation Aromatics Nitoaromatics Agrobacterium vitis S4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium vitis; 1146.9033 1791.2446 1522.6767 1319.688 1337.254 2344.3383 1834.6744 1164.9273 1186.1087 2190.0646 774.5772 2295.9251 211905521 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 843.7229 1480.2389 1269.5443 980.1127 1097.9277 1202.6351 1325.6716 1557.1783 1326.4877 1237.5888 1365.8469 138894340 fnr Stress Oxygen stress Geobacillus thermodenitrificans NG80-2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus;species:Geobacillus thermodenitrificans; 727.8198 674.6928 892.1746 821.5925 630.1383 520.7139 596.3203 493.8683 494.5397 945.4161 571.7993 121715614 BADH Organic Remediation Aromatics Other aromatics Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 696.1019 892.4758 1176.477 885.2025 1846.9811 895.2983 1204.2018 758.0422 1067.7415 767.3249 1088.9152 1334.2487 111150107 pcc Carbon cycling Carbon fixation Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 3285.5265 1095.3373 1395.0782 1757.0637 1987.2437 1019.7048 1340.709 1606.4791 1208.0063 1393.8632 1725.4228 1476.2824 184200841 TerC Metal Resistance Tellurium Kocuria rhizophila DC2201 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Kocuria;species:Kocuria rhizophila; 1093.9263 1310.9818 926.2663 1005.9361 735.4402 1050.2943 663.2555 818.1993 1419.6914 109452488 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1550.6781 638.0213 992.378 1355.1098 992.1335 915.0855 1396.179 1948.9452 897.0962 846.5955 993.0088 1159.2437 194561309 silC Metal Resistance Silver Burkholderia cenocepacia PC184 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia cenocepacia; 1851.0915 2491.4371 1734.1681 1727.3675 3143.3962 1648.2427 1907.0515 1971.1203 2018.9354 2165.8446 903.0127 1564.1557 157804730 APS_AprA Sulphur adenylylsulfate reductase Thiocapsa roseopersicina superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Chromatiaceae;genus:Thiocapsa; 1433.8709 825.6411 502.588 1011.7129 743.2707 892.5959 499.0377 706.7759 556.2902 1958.6058 113730446 silC Metal Resistance Silver Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 2232.7299 1080.5814 1980.7141 2258.0096 947.6734 1820.3896 2048.5712 1995.583 1307.1854 1898.1959 1312.8004 1970.2762 153892208 ureC Nitrogen Ammonification Opitutaceae bacterium TAV2 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae; 1343.9897 2574.3784 2385.8423 2104.0083 3640.9892 2375.5969 1890.3615 1597.8608 2243.7715 1857.4607 12750.3683 2473.6079 229242653 fnr Stress Oxygen stress Cellulomonas flavigena DSM 20109 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Cellulomonadaceae;genus:Cellulomonas;species:Cellulomonas flavigena; 3021.5684 2279.1462 2599.7473 3928.9843 2542.2652 2309.3107 2092.6972 2420.5882 2317.5675 2863.5132 3102.8736 2416.3441 29540964 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Coxiella burnetii RSA 493 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Legionellales;family:Coxiellaceae;genus:Coxiella;species:Coxiella burnetii; 489.225 478.0879 467.7222 428.9237 558.5874 1045.7062 419.9964 943.4241 743.8419 584.7646 238783347 papC soil_borne_pathogen adherence Yersinia bercovieri ATCC 43970 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia bercovieri; 2153.7614 1177.3442 2087.6666 1860.5485 920.8646 1798.9274 2472.5567 2065.1099 1537.2402 2490.9557 1653.7336 1847.8386 222159803 Van Antibiotic resistance other Enterococcus avium superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Enterococcaceae;genus:Enterococcus; 394.9924 571.3507 376.4285 563.6121 591.3658 554.2651 860.0377 390.7042 241.7201 373.601 296806101 nbaC_fungi Fungi function carbon degradation Arthroderma otae CBS 113480 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma;species:Arthroderma otae; 621.4452 1594.374 1696.8161 1051.8466 992.9109 989.7324 917.5035 1305.591 888.3595 1103.8594 1110.9217 1444.3822 237799991 type_III_secretion virulence secretion Pseudomonas syringae pv. oryzae str. 1_6 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas coronafaciens; 767.0245 917.7316 767.0015 1017.7858 952.5361 524.2926 811.1799 573.9547 644.2036 669.5897 576.8254 151302248 AprA Sulphur adenylylsulfate reductase Desulfocella sp. DSM 2056 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfocella; 876.8738 508.0979 530.9838 118462569 CDH Carbon cycling Carbon degradation Cellulose Mycobacterium avium 104 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium avium; 29619.2364 29185.3065 30592.5752 36019.0525 11367.8152 34679.9823 21499.9553 23482.7608 17486.7891 29559.4568 23950.6798 25710.0737 251854396 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium matruchotii; 2149.1541 762.1577 1173.4092 1848.4673 1444.9631 1033.6739 1082.7895 1123.703 1315.7763 2756.3668 1347.1571 227496146 opuE Stress Osmotic stress Actinomyces urogenitalis DSM 15434 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Actinomyces;species:Actinomyces urogenitalis; 3654.6594 4679.3381 5372.3981 3936.2121 5702.0993 4599.4175 3558.2481 3426.5501 3165.777 3662.361 5940.6437 4771.9362 110647355 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Alcanivorax borkumensis SK2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax;species:Alcanivorax borkumensis; 2536.2058 2872.7836 2253.2568 2552.4379 2268.5464 3262.0113 2424.1523 1933.4518 2457.6343 3070.93 2356.3571 2777.4499 183581560 pcc Carbon cycling Carbon fixation Kocuria rhizophila DC2201 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Kocuria;species:Kocuria rhizophila; 1479.5004 1597.0245 1791.1774 1341.5767 777.4168 1624.9259 1872.7555 786.0999 1398.8742 1616.2431 1775.9227 1594.0648 48093941 Catechol Organic Remediation Aromatics Other aromatics Nocardia sp. H17-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Nocardia; 4175.0938 2069.7733 3012.9013 4257.903 2947.0513 2399.886 2088.2926 2120.0754 1920.9678 2422.8962 5538.3438 3412.2552 126636769 pimF Organic Remediation Aromatics Aromatic carboxylic acid Shewanella loihica PV-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella loihica; 541.2544 594.2745 564.4065 479.7977 379.9523 659.9855 487.6711 457.3721 945.4883 89329743 tfdA Organic Remediation Aromatics Chlorinated aromatics Rhodoferax sp. P230 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Rhodoferax; 1218.3497 1208.0197 1441.212 921.9393 1095.937 787.4785 958.2113 2148 1097.5045 1054.1128 2176.9174 1312.2083 161381979 glnA Stress Nitrogen limitation Oceanibulbus indolifex HEL-45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 6954.5048 4113.3223 5741.6283 5906.1399 6680.6578 5726.0896 4462.6871 4458.8751 3374.5105 5256.5391 9379.6857 5439.04 150014776 rubisco Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 4316.2404 2262.3897 3434.779 3727.028 3973.6532 3159.5457 3048.3965 3785.3328 3610.5529 3820.2211 3306.6263 2703.103 171684047 cutinase_fungi Fungi function carbon degradation Podospora anserina S mat+ superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Lasiosphaeriaceae;genus:Podospora;species:Podospora anserina; 869.5935 796.4465 740.7621 544.3784 795.4488 592.6862 503.8748 494.6101 119716218 pcc Carbon cycling Carbon fixation Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 5629.7444 3205.8485 3181.3558 4498.4452 3484.9712 2855.7536 2744.1487 2726.6326 2666.791 2891.273 5328.633 3393.4693 242239314 vip virulence virulence protein Dickeya dadantii Ech703 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Dickeya;species:Dickeya dadantii; 6830.5918 6657.0039 6993.9287 7690.4753 10902.2259 6772.7755 6296.6962 4844.7109 7974.0231 7848.8639 7883.1211 6175.4097 145012565 per_fun soil_benifit Magnaporthe grisea 70-15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe;species:Magnaporthe oryzae; 2062.1733 1468.4557 879.6898 1970.6698 1539.628 1215.1909 1826.1692 1591.8026 1285.7979 1228.1364 1918.1003 1354.2842 2062565 B_lactamase_A Antibiotic resistance Beta-lactamases Burkholderia cepacia superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 2101.1739 2207.5203 2076.9219 2076.3873 2361.9884 2609.7526 2085.9412 1494.3572 2610.6664 2663.4495 1845.1736 3002.784 48477912 dnaK Stress Heat shock Picrophilus torridus DSM 9790 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermoplasmata;order:Thermoplasmatales;family:Picrophilaceae;genus:Picrophilus;species:Picrophilus torridus; 1991.2978 909.8503 1701.6142 2264.9405 1733.5841 1406.9679 856.6791 1308.6897 1223.546 916.2072 2241.2553 2168.2005 220691633 acc soil_benifit Aspergillus flavus NRRL3357 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus flavus; 1089.816 732.3677 565.2413 441.9568 197117513 cytochrome Energy process Energy process Geobacter bemidjiensis Bem superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter bemidjiensis; 1930.0196 1391.3596 1470.6399 1588.6115 1498.3911 1602.297 1611.2802 1751.7666 1139.3825 1364.2275 2220.6902 1779.1493 218288768 fnr Stress Oxygen stress Alicyclobacillus acidocaldarius LAA1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Alicyclobacillaceae;genus:Alicyclobacillus;species:Alicyclobacillus acidocaldarius; 1651.004 1742.8375 1634.8634 1506.0566 1707.0028 1528.6822 1614.0904 1413.4522 1902.9702 1590.0243 1289.5206 1815.5538 77973060 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Yersinia frederiksenii ATCC 33641 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia frederiksenii; 1477.19 3330.751 2434.7968 1630.2931 3336.7076 2510.6821 2023.8987 2540.7594 1719.3714 2591.063 3176.3168 1831.7442 105897463 glnA Stress Nitrogen limitation Burkholderia cenocepacia AU 1054 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia cenocepacia; 8232.9371 9174.8054 9801.0527 5766.3018 12205.0304 7306.715 7379.8527 6372.2095 8374.5485 8553.2547 7319.1675 6441.3915 83814063 Arylest Organic Remediation Aromatics Other aromatics Salinibacter ruber DSM 13855 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Rhodothermaceae;genus:Salinibacter;species:Salinibacter ruber; 2437.6261 3168.258 3137.81 2299.7048 3726.1744 2625.2473 1996.6111 2844.1409 2502.8555 3461.7445 2840.2847 3456.4871 269836399 pstC Stress Phosphate limitation Sphaerobacter thermophilus DSM 20745 superkingdom:Bacteria;phylum:Chloroflexi;class:Thermomicrobia;order:Sphaerobacterales;family:Sphaerobacteraceae;genus:Sphaerobacter;species:Sphaerobacter thermophilus; 7209.6378 12392.3825 7735.6315 7954.5636 2759.9206 8376.2391 9008.8086 4719.238 7359.6698 8690.535 5962.4741 4767.2809 14026863 proV Stress Osmotic stress Mesorhizobium loti MAFF303099 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium loti; 2533.1432 2805.2098 2914.1782 1894.1348 2715.2141 2853.0166 1893.9181 3352.8109 2832.0312 2851.6544 2623.5347 3234.1191 221156346 sigma_70 Stress Sigma factors Thermomicrobium roseum DSM 5159 superkingdom:Bacteria;phylum:Chloroflexi;class:Thermomicrobia;order:Thermomicrobiales;family:Thermomicrobiaceae;genus:Thermomicrobium;species:Thermomicrobium roseum; 3266.7347 1851.1673 2592.421 932.8265 1007.0368 1216.28 1470.4028 1362.0286 1634.8352 3074.4446 1698.9112 167644962 B_lactamase_A Antibiotic resistance Beta-lactamases Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 6794.7276 9901.4114 12042.9105 7821.8209 6788.0067 11293.2985 9393.1071 11261.5852 12620.8304 10559.8322 5649.7218 13320.4605 99083075 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 3626.4362 3104.0202 3718.4748 3291.6883 3665.952 3293.6438 3400.4018 3595.4586 3503.7417 2970.6241 4233.9872 3873.02 83726550 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Ralstonia solanacearum UW551 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 3525.3199 2785.5863 2447.388 4661.0623 2251.4069 3685.693 3549.829 3209.9562 2887.55 3513.3559 2726.7925 2292.7254 197782340 TerC Metal Resistance Tellurium Streptomyces sviceus ATCC 29083 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces sviceus; 7065.3212 4164.369 5882.0797 8541.5163 5029.9838 5818.1156 4901.6986 4209.9265 7037.4486 6921.5014 7036.0616 7669.5441 258405360 katE Stress Oxygen stress Desulfohalobium retbaense DSM 5692 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfohalobiaceae;genus:Desulfohalobium;species:Desulfohalobium retbaense; 6370.1864 5145.9408 4786.355 6019.843 5077.2499 4306.0349 3925.1119 4668.8721 4655.6023 3803.717 7508.9619 4166.2298 119669935 cydB Stress Oxygen limitation Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 1944.043 2363.2853 2338.0656 1707.7252 1523.9079 3072.8591 2426.779 2221.2066 3074.1077 2933.6348 2668.264 209546214 mer Metal Resistance Mercury Rhizobium leguminosarum bv. trifolii WSM2304 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1442.9914 709.926 1042.7864 1262.2269 967.7309 930.379 666.0532 656.5671 848.4492 1283.7305 1253.9007 207725188 nagG Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia solanacearum MolK2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 4291.3369 3535.4474 4851.9863 1914.9825 1289.0209 4214.5772 3665.6783 4824.3515 4847.5068 3846.8865 1012.6369 5054.9736 27381531 pobA Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 4046.2208 2693.9164 2876.1356 3349.49 3118.7773 3108.5747 2627.875 2740.9459 3034.9731 3219.5331 3957.633 2697.8641 212538619 p450aro Fungi function organic remediation Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 3454.2764 4905.6034 3639.1896 3311.7191 6584.6467 3684.9452 3733.2265 3954.9742 4716.1767 4445.2519 3468.432 3476.193 260409407 sigma_70 Stress Sigma factors Acinetobacter baumannii ATCC 19606 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter;species:Acinetobacter baumannii; 651.2821 23611.8231 659.7667 540.2528 633.3945 683.3194 218757603 dsrB Sulphur sulfite reductase Desulfovibrio vulgaris str. 'Miyazaki F' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 4086.5212 6515.5234 5809.1351 4819.3509 8316.0505 7384.7419 4878.3566 6141.3084 6264.6698 6571.8799 4187.2481 5221.5333 206577135 pstA Stress Phosphate limitation Klebsiella pneumoniae 342 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella pneumoniae; 648.0718 1076.3509 821.7617 811.4383 618.046 650.468 755.8671 190333368 ara Carbon cycling Carbon degradation Hemicellulose Geobacillus stearothermophilus superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 3566.0197 7446.1886 7140.0215 4597.4236 5646.1118 4929.742 6033.1333 5818.0638 6247.0799 7291.4347 5755.8625 5457.1804 148254987 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1086.6997 1651.9449 858.7311 846.1783 1842.2602 1060.9691 731.4564 1195.4785 930.9946 1065.0895 1361.6425 1402.8051 240009575 pstB Stress Phosphate limitation Methylobacterium extorquens AM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 867.8389 1246.3238 982.7529 1247.7897 1452.4331 1294.1975 1107.3702 615.3967 1153.0816 1684.4701 1371.2025 302206061 phzF soil_benifit Corynebacterium pseudotuberculosis C231 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium pseudotuberculosis; 2307.2388 4403.2282 3532.8914 3016.0032 6344.4673 2971.3807 3043.2234 3011.5672 2684.3343 2316.1673 4485.7538 3449.0853 89893343 dmsA Organic Remediation Others Desulfitobacterium hafniense Y51 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium;species:Desulfitobacterium hafniense; 4048.3735 2395.9954 2499.294 2731.0673 2920.7733 1881.4711 2014.1146 2006.2711 1737.4971 1894.1313 4274.1211 2380.0357 212171398 alkB Organic Remediation Other Hydrocarbons Alcanivorax sp. S8-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax; 2131.7593 2602.2337 3185.485 1537.0815 1867.1351 3375.3949 2428.339 3132.8762 3059.8145 3142.2836 1450.3893 2860.5169 237846168 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 4279.9463 1916.3911 2884.2123 3593.1484 2348.2712 2714.7158 2355.9389 2760.1252 2745.9572 3097.8411 2151.8676 2878.0119 15807970 pcc Carbon cycling Carbon fixation Deinococcus radiodurans R1 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus radiodurans; 1587.3214 1403.533 1244.3764 1787.0887 2150.9783 1364.3874 1022.3529 937.7422 1094.6389 1293.7672 1527.5041 84392518 phn Organic Remediation Herbicides related compound Oceanicola batsensis HTCC2597 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola batsensis; 4566.1214 6908.0578 6143.6596 3788.7217 7759.0762 6126.8134 5149.7422 4910.7518 5777.5463 5327.2451 16887.9812 5093.8362 172040574 sigma_70 Stress Sigma factors Corynebacterium urealyticum DSM 7109 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium urealyticum; 3049.0643 3534.5172 5344.8021 1983.3194 2376.3503 4332.7618 3063.5143 5293.9367 3930.3861 4339.1595 2208.4617 4503.5786 27352833 CysJ Sulphur sulfite reductase Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 3483.3574 5372.9239 4991.3909 4421.9309 2356.3921 4962.6459 4483.8152 1790.3914 4845.4799 4825.7822 2863.4125 2586.2956 229213008 grpE Stress Heat shock Dethiosulfovibrio peptidovorans DSM 11002 superkingdom:Bacteria;phylum:Synergistetes;class:Synergistia;order:Synergistales;family:Synergistaceae;genus:Dethiosulfovibrio;species:Dethiosulfovibrio peptidovorans; 1452.4074 996.8511 477.2204 227086497 hly virulence hemolysin Lactobacillus fermentum ATCC 14931 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus fermentum; 1006.1731 1685.0925 1509.9692 1070.3367 1192.0977 1721.394 1436.3478 1853.7693 1378.7215 1299.5067 1472.1078 182679594 CopA Metal Resistance Copper Beijerinckia indica subsp. indica ATCC 9039 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Beijerinckia;species:Beijerinckia indica; 3748.484 2933.3362 2661.7582 3243.8889 4021.4881 2352.1854 2588.5092 2671.8124 2564.7929 2864.105 2751.73 2000.4187 28868949 atzA Organic Remediation Herbicides related compound Pseudomonas syringae pv. tomato str. DC3000 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 2358.3353 1736.9759 2765.4102 2081.1608 2009.9762 2217.9726 1978.6028 2970.6911 2430.2477 2257.0521 1152.5083 2547.4742 158108494 sigma_70 Stress Sigma factors Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 1559.7987 1897.392 1649.3592 1618.568 4274.8065 1675.5081 3548.464 989.3669 1797.3144 1807.6472 1567.0288 1624.2485 49473734 grpE Stress Heat shock Bartonella quintana str. Toulouse superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bartonellaceae;genus:Bartonella;species:Bartonella quintana; 1619.1023 1123.0099 723.2958 1200.5607 1587.5388 1053.7901 1697.0546 847.6259 935.5377 1092.2798 1563.4491 1573.5349 5458471 pstB Stress Phosphate limitation Pyrococcus abyssi GE5 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Pyrococcus;species:Pyrococcus abyssi; 2478.1648 2332.5757 2499.6429 2786.9121 3169.9396 2689.1854 1760.7144 2115.3427 2137.3818 2160.8197 3797.1847 2824.6892 116694707 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 954.7677 1996.0576 1186.8291 855.0406 2065.9637 1044.0985 1171.007 1373.7018 1119.7424 1277.7768 1593.2156 1118.747 310791215 phospholipase_C_fungi Fungi function carbon degradation Glomerella graminicola M1.001 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Glomerellaceae;genus:Glomerella;species:Glomerella graminicola; 976.4206 2344.8213 1718.6981 993.9061 2567.4245 1327.0565 1318.3191 1639.9111 1528.7249 1799.6073 1312.071 169846011 phenol_oxidase Carbon cycling Carbon degradation Lignin Coprinopsis cinerea okayama7#130 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis;species:Coprinopsis cinerea; 1002.7076 1477.3974 1451.8694 1095.076 1592.6389 1129.267 1037.4649 1572.0848 1139.8601 1066.3233 909.139 959.5158 227479910 SMR_antibiotics Antibiotic resistance transporter Synechococcus sp. CC9311 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 807.2811 1467.713 987.0421 1155.1534 1533.4852 1001.7124 1202.9745 874.4369 995.9433 1028.3983 1561.4092 190695550 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rhizobium etli CIAT 652 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 884.5302 2770.0786 1415.2299 1566.6407 1640.0567 2609.0347 2714.2114 2259.2383 2019.4363 2661.6238 2481.3942 85720869 narG Nitrogen Denitrification Enterobacter cloacae superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter; 1640.9566 4378.5968 2286.654 1732.4082 6523.2747 2819.4797 3114.27 18165.5147 2887.2238 3664.5384 1678.575 3385.7243 1655478 isopullulanase Carbon cycling Carbon degradation Starch Arthrobacter globiformis superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 605.8906 830.2157 862.9621 1020.1917 1258.97 796.1681 1387.4502 550.696 973.2919 732.0836 942.0287 572.8587 21218771 narH Stress Oxygen limitation Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 2289.4142 3219.6487 3099.6002 2690.8103 2415.5017 3579.952 2723.7661 2588.3897 4554.5128 3861.1684 3018.1869 3549.7022 160898791 alkH Organic Remediation Other Hydrocarbons Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 9946.1594 11178.8399 9278.4454 9219.8999 4850.9299 13336.9407 9868.0777 10466.4797 11300.1089 12188.9278 9562.1766 11653.8752 89512920 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 493.7444 579.3779 571.7996 619.1305 581.5004 630.9996 550.3608 193213220 hrcA Stress Heat shock Chlorobaculum parvum NCIB 8327 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobaculum;species:Chlorobaculum parvum; 1808.0678 801.0353 1511.5104 1430.1997 1461.1356 1199.8682 1149.6494 1072.3901 961.7129 1242.4908 2453.7048 1614.8418 159046351 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 3221.6156 4486.5518 4607.9992 4094.5737 6431.0493 4444.6648 4852.4798 3726.2761 4182.4574 4008.3757 7312.5127 4736.2321 77978206 tfdA Organic Remediation Aromatics Chlorinated aromatics Yersinia intermedia ATCC 29909 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia intermedia; 906.801 1088.6757 888.2753 1455.7182 715.6277 1383.322 1518.7728 1067.1006 1962.4381 971.1796 1279.0459 1073.6774 114770854 PhaB Organic Remediation Aromatics Aromatic carboxylic acid alpha proteobacterium HTCC2255 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales; 431.1927 511.6009 524.281 351.3273 580.8025 393.8657 622.6593 491.9044 622.1166 94554094 ZntA Metal Resistance Zinc Deinococcus geothermalis DSM 11300 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus geothermalis; 3360.069 3050.829 3438.3121 2853.0712 3049.101 3214.4578 3147.3387 3173.5466 2995.6638 3067.6973 4838.339 4160.1669 35210351 gyrB other category gyrB Sulfobacillus thermosulfidooxidans superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XVII. Incertae Sedis;genus:Sulfobacillus; 2589.3305 1422.3622 1925.5659 1865.2742 892.8614 2427.8841 1688.8075 1545.3222 1232.8438 1511.2115 1357.7264 1244.0958 302681819 glucoamylase_fungi Fungi function carbon degradation Schizophyllum commune H4-8 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Schizophyllaceae;genus:Schizophyllum;species:Schizophyllum commune; 835.4755 542.7636 403.7788 510.1825 118570307 alkB Organic Remediation Other Hydrocarbons Mycobacterium ulcerans Agy99 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium ulcerans; 1229.5253 962.1649 816.5084 1184.2469 521.3863 1170.7696 1700.0368 1002.9237 1274.149 1338.6898 944.4792 1075.2154 205373926 pcc Carbon cycling Carbon fixation Bacillus coahuilensis m4-4 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus coahuilensis; 1790.0148 2597.022 2364.6438 2509.3866 1505.0622 3319.5481 1371.9977 2282.8053 2185.7365 2125.556 2835.5278 2064.3428 251782196 cap virulence capsule Streptococcus dysgalactiae subsp. equisimilis GGS_124 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus;species:Streptococcus dysgalactiae; 762.6993 644.5439 829.1142 640.9473 1476.8151 1062.7789 669.7581 936.786 768.4221 810.1371 1115.1079 111614726 bclA Organic Remediation Aromatics Aromatic carboxylic acid Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 7442.2718 8802.1749 8641.456 7866.3516 11926.439 9465.0419 10010.2053 7371.6714 8988.5678 7942.1372 14109.5055 9957.2435 72120537 silC Metal Resistance Silver Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 3908.5567 4286.1369 2918.8599 2994.0872 5161.1269 4111.0199 2910.8685 3521.5444 3737.5263 3119.8055 4937.6646 2905.4628 27382179 linB Organic Remediation Pesticides related compound Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 1008.1611 1542.7921 665.5013 1080.9265 800.9835 1421.4606 1154.5358 704.7713 1384.977 1302.7562 1223.5248 169759198 nbzC Organic Remediation Aromatics Nitoaromatics Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 753.4579 1248.84 799.8122 515.6795 1246.9057 1109.9854 576.938 715.5126 868.6716 1154.0218 862.9408 124257907 tutFDG Organic Remediation Aromatics BTEX and related aromatics Geobacter grbiciae superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 1363.7543 1113.5874 1223.8079 1437.9114 1443.8729 1262.884 1119.3642 1428.05 1001.8124 1105.2849 4191.7167 1176.4647 119399415 CopA Metal Resistance Copper Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 533.4936 996.2767 784.4983 796.7364 634.0283 457.0235 670.9438 787.2794 567.764 29838396 INF1_elicitin_Oomycetes soil_borne_pathogen oomycete elicitor Phytophthora brassicae superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 1954.2493 812.7903 1519.4272 1458.3527 1313.0521 1508.1921 1151.2152 1144.816 1141.654 1339.639 3158.0822 1270.6199 158520534 pilin virulence pilin Desulfococcus oleovorans Hxd3 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfococcus;species:Desulfococcus oleovorans; 2292.7723 2145.4832 2209.5801 2612.166 1854.4227 2406.0106 3329.8789 6016.7464 2361.2045 2045.5595 2258.9734 3976.9366 197658973 nagG Organic Remediation Aromatics Aromatic carboxylic acid Rhodococcus sp. PY11 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 4452.4976 3635.4 4661.0974 2961.8295 2640.7789 4589.3818 3558.0876 4359.039 4044.8369 3795.9117 4046.536 4838.6891 238596433 cellobiase_fungi Fungi function carbon degradation Moniliophthora perniciosa FA553 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Marasmiaceae;genus:Moniliophthora;species:Moniliophthora perniciosa; 472.4273 1145.4538 609.3954 620.0733 1333.7654 714.0678 736.1822 708.4301 793.0524 18438.0807 262208466 fnr Stress Oxygen stress Comamonas testosteroni CNB-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 1077.3508 1795.9995 1594.3418 1535.383 1518.2427 2324.9234 1535.8022 1216.9294 1144.9966 1403.301 958.2982 222080905 catB Organic Remediation Aromatics BTEX and related aromatics Agrobacterium radiobacter K84 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 1665.6452 2218.8866 1680.1684 2587.1885 1599.5023 2967.4621 2213.6048 1645.7332 2352.7473 2573.5316 1341.9903 2339.8274 156743673 BchY other category chlorophyllide reductase Roseiflexus castenholzii DSM 13941 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus;species:Roseiflexus castenholzii; 934.3291 1218.8636 1457.7418 978.1562 763.8274 1338.7446 1129.3877 1360.2299 153901527 exaA Organic Remediation Chlorinated solvents Methylobacterium extorquens PA1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 4144.898 2921.0779 2891.2494 3326.1015 2341.787 2778.6539 2086.0826 2328.5352 2392.3537 2575.2178 2648.3762 2578.1798 221565482 nrfA Nitrogen Dissimilatory N reduction Geobacter sp. FRC-32 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 484.0491 923.7206 614.5942 796.7541 19866.2319 633.4204 473.616 1008.2038 851.5311 11164.9368 751.8873 262210990 pcbC soil_benifit Comamonas testosteroni CNB-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 918.4065 957.9981 1290.2776 1103.048 1319.5742 995.2587 765.6549 676.9435 787.5554 913.611 1639.2868 1188.0541 169762006 AceB Carbon cycling Carbon degradation Others Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 3072.9604 4452.4782 3684.9745 2912.9841 3313.4064 4483.1024 4016.1855 3386.5939 3825.5107 4372.7146 3115.5827 3802.7482 120556694 CopA Metal Resistance Copper Marinobacter aquaeolei VT8 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter hydrocarbonoclasticus; 393.5551 394.5611 441.1576 344.7493 536.77 88776507 ara Carbon cycling Carbon degradation Hemicellulose Reinekea sp. MED297 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;genus:Reinekea;species:Reinekea blandensis; 1475.2826 694.7984 1035.0398 685.2773 717.691 837.9192 1823.5635 555.7051 71838962 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Pelobacter propionicus DSM 2379 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter propionicus; 2930.8467 2086.7209 2911.1249 3554.6584 4239.6176 2802.2699 4408.7082 5464.1712 2670.3905 2908.5363 4532.2655 3268.9306 558805 mauAB Organic Remediation Herbicides related compound superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus; 1667.6869 1343.6387 1382.0217 1899.696 1488.1339 1161.969 1308.9594 858.2655 1503.4117 1854.2001 1623.2223 1217.4002 163140820 mcrA Carbon cycling Methane Methane production Candidatus Methanosphaerula palustris superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanomicrobiales;genus:Methanosphaerula; 3409.023 1005.3112 1758.8416 3185.3731 2309.1766 1917.5606 3044.8752 2094.1602 1928.4698 1709.5053 1349.6781 2274.1318 39995813 SMR_antibiotics Antibiotic resistance transporter Geobacter sulfurreducens PCA superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter sulfurreducens; 2165.2998 507.8545 750.0048 1725.6279 857.6156 1026.794 937.6682 2487.5975 828.2627 1380.2067 965.9813 1122.0794 197103489 MFS_antibiotic Antibiotic resistance transporter Phenylobacterium zucineum HLK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Phenylobacterium;species:Phenylobacterium zucineum; 1128.3667 1432.1485 1365.5921 1473.0455 1577.7178 1557.3235 1134.8643 1131.9674 1440.4026 1390.7255 2219.3929 1449.367 218272682 ara Carbon cycling Carbon degradation Hemicellulose Roseburia intestinalis L1-82 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Roseburia;species:Roseburia intestinalis; 799.9336 609.8138 502.5163 556.6846 1033.8501 623.8238 646.5501 577.3079 126470052 bphD Organic Remediation Aromatics Polycyclic aromatics Rhodococcus rhodochrous superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 1448.915 1021.4432 1821.4486 955.101 1433.7845 1230.0099 1387.1738 1980.7618 1303.281 1384.2757 212633788 cytochrome Energy process Energy process Shewanella piezotolerans WP3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella piezotolerans; 1475.1618 839.7854 1170.4286 1390.1892 987.678 1262.9389 1281.7979 1438.5202 1045.3057 1114.5345 937.44 1187.5872 148553490 hrcA Stress Heat shock Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 8092.4756 4214.2179 5102.7488 2868.4398 3693.4313 3029.2465 4701.394 8180.8542 3564.2134 4548.1731 7923.122 4088.3811 23494142 pcaG Organic Remediation Aromatics Other aromatics Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 3067.9636 2848.0503 3396.8455 4208.2221 2051.6078 3849.3148 4131.5072 3931.4435 3494.3431 4697.2452 2237.6175 197625341 pstA Stress Phosphate limitation Cyanobium sp. PCC 7001 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanobium; 1009.5907 1572.495 956.5241 2778.6716 1064.6556 1580.8956 935.8781 1182.8912 823.5368 2024.3852 17385516 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1048.0751 1224.2665 1182.1474 1071.8176 1112.6194 990.2259 903.2919 1285.3164 758.8211 989.1799 1817.5574 1263.7056 183580329 fnr Stress Oxygen stress Kocuria rhizophila DC2201 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Kocuria;species:Kocuria rhizophila; 1390.0413 1328.2712 895.8068 1143.4557 1785.6628 1287.1381 2045.9101 1149.458 1349.704 962.3246 1077.3592 1250.7972 54310401 CysJ Sulphur sulfite reductase Photobacterium profundum SS9 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Photobacterium;species:Photobacterium profundum; 1812.4333 1637.3546 1918.3106 1824.0172 2058.3041 1653.3279 1278.7583 1498.2063 1346.4889 1177.9708 3196.7378 2227.0574 93454938 APS_AprB Sulphur adenylylsulfate reductase delta proteobacterium MLMS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria; 2408.7333 3125.0735 3280.7186 2613.4741 1994.3915 3649.4539 3189.4344 3440.8694 3698.8635 3510.4079 2040.9381 3823.5939 197715433 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Streptomyces sviceus ATCC 29083 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces sviceus; 2364.8836 2762.9433 2152.44 2481.7792 2605.609 2312.3747 4031.2287 2162.864 2329.1514 2574.0341 3970.9787 2560.8083 162146364 exaA Organic Remediation Chlorinated solvents Gluconacetobacter diazotrophicus PAl 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter;species:Gluconacetobacter diazotrophicus; 32902.4838 29937.4273 31573.1617 30876.5223 46940.6502 30601.6119 28432.1594 24944.848 31385.5273 32919.4526 26161.3277 22217.759 71158806 ChrA Metal Resistance Chromium Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 1668.1301 2386.9992 1248.8837 1936.1451 1878.5108 2103.0336 3956.0356 1085.5898 2910.1023 1441.2313 1885.9794 1981.7015 126724575 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Rhodobacterales bacterium HTCC2150 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 576.1381 1167.269 718.6577 462.7298 872.3662 459.394 871.8979 336.2585 780.9214 707.5174 665.6496 5993.6007 83749300 dehH Organic Remediation Chlorinated solvents Ralstonia solanacearum UW551 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 1838.5323 1714.0011 2977.9338 1893.0253 24977.4255 1374.6175 1213.8598 1945.0961 1194.1907 1401.6351 1355.2758 2007.5732 219542959 fnr Stress Oxygen stress Chloroflexus aggregans DSM 9485 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aggregans; 713.8594 1677.8505 1802.8671 966.4289 1436.4882 1086.4248 1056.0065 1512.9978 997.6732 1191.5942 967.4707 1639.9171 113969795 iro virulence Iron oxidation Shewanella sp. MR-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella; 484.1162 577.6794 435.5372 512.2609 209401910 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2453.7763 2070.4877 1642.1428 2284.3454 4386.5445 1953.695 2662.1978 2039.2512 2321.0001 2009.5813 1807.2748 2147.7118 108801912 linB Organic Remediation Pesticides related compound Mycobacterium sp. MCS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 5149.9831 7920.0333 7617.8181 4553.2216 9973.2087 5836.811 4809.9597 5812.0238 5091.7035 5982.8385 7212.8106 5541.3459 225162337 Tet Antibiotic resistance other Clostridium hylemonae DSM 15053 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium hylemonae; 3085.6942 1959.2188 2301.1062 2686.3723 1522.3938 2553.3076 3702.4518 3428.3899 1653.4617 3430.0988 2078.1522 2075.9191 227069639 nirA Nitrogen Assimilatory N reduction uncultured archaeon superkingdom:Archaea; 4424.866 6165.1057 6841.7663 10977.4156 11515.0739 7136.2882 5608.4685 10437.6203 5481.3093 5741.1394 8671.2242 8585.6209 197106259 fnr Stress Oxygen stress Phenylobacterium zucineum HLK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Phenylobacterium;species:Phenylobacterium zucineum; 5566.0216 6771.6615 8756.1289 5634.4084 4580.0171 9323.4956 5977.8124 8254.9686 8920.5225 6943.343 4792.1396 8692.5034 225212310 amyA Carbon cycling Carbon degradation Starch Roseburia inulinivorans DSM 16841 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Roseburia;species:Roseburia inulinivorans; 1061.9171 736.9293 682.224 881.9288 969.4562 918.6152 1050.3976 697.7546 618.5818 744.4225 1524.6734 865.3165 114197670 amyA Carbon cycling Carbon degradation Starch Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 2777.8931 2744.8101 982.7384 1767.1451 2268.7928 1897.1902 1764.8207 1752.5897 1818.131 1751.1226 2849.9426 1274.1422 116610035 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 443.7385 796.2441 870.1301 459.7978 684.5328 852.6879 939.6525 702.2454 871.7482 735.6792 789.1706 62425502 ZntA Metal Resistance Zinc Brevibacterium linens BL2 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Brevibacteriaceae;genus:Brevibacterium;species:Brevibacterium linens; 620.6294 397.4158 612.8393 641.1537 693.2163 455.6134 859.3724 424.4121 437.7657 488.8113 781.1234 91203786 hzo Nitrogen Anammox Candidatus Kuenenia stuttgartiensis superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;genus:Candidatus Kuenenia; 1033.8974 556.4297 841.5648 890.8866 567.1634 1037.5195 719.7649 148273338 linB Organic Remediation Pesticides related compound Clavibacter michiganensis subsp. michiganensis NCPPB 382 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Clavibacter;species:Clavibacter michiganensis; 2841.9383 2793.4867 4565.3403 2904.93 2265.4559 2758.4779 3102.3066 5059.1986 3097.8599 3174.4318 2861.9309 3726.4101 158109348 hrcA Stress Heat shock Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 1599.7597 2600.5262 1782.4101 1143.3598 2631.0527 1520.3665 1609.64 1632.1885 1911.0546 2009.3468 2090.8372 1508.5397 239505939 pstC Stress Phosphate limitation Kosmotoga olearia TBF 19.5.1 superkingdom:Bacteria;phylum:Thermotogae;class:Thermotogae;order:Thermotogales;family:Thermotogaceae;genus:Kosmotoga;species:Kosmotoga olearia; 2758.067 2362.5972 3108.731 3002.0043 3553.946 2567.6656 2005.3284 2136.9125 2087.8389 2377.3483 4213.5311 3152.3293 119957138 SMR_antibiotics Antibiotic resistance transporter Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 3474.3309 2516.4763 4008.0273 2567.5736 2911.7865 2693.5377 2802.3601 2027.5383 2514.155 2179.1103 3255.8383 3002.0013 42522577 phoB Stress Phosphate limitation Bdellovibrio bacteriovorus HD100 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Bdellovibrionales;family:Bdellovibrionaceae;genus:Bdellovibrio;species:Bdellovibrio bacteriovorus; 4624.7131 4324.3518 5022.6653 4348.1971 4597.0048 4794.5372 3317.1898 4320.148 3534.5785 3990.6769 8210.0719 4846.3243 14025121 mer Metal Resistance Mercury Mesorhizobium loti MAFF303099 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium loti; 2531.8537 2331.8621 3535.4649 2815.403 3028.5583 2486.6623 2084.2474 1549.6858 2775.4173 2829.02 3169.3497 3162.7796 34017198 dsrB Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 1356.2322 1090.316 785.1695 743.2249 645.2182 821.9257 878.5874 849.6999 67543188 Arylest Organic Remediation Aromatics Other aromatics Burkholderia vietnamiensis G4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia vietnamiensis; 4587.5191 2508.6523 3218.8967 4302.1049 3876.8648 3108.455 2746.1101 3090.1845 2867.9448 3316.4914 5653.9262 3861.3442 115254338 nmoA Organic Remediation Aromatics Nitoaromatics Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 836.0396 671.8987 791.758 343.4654 564.2649 385.6557 658.5624 485.0387 166862456 SMR_antibiotics Antibiotic resistance transporter Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 7562.7595 3567.1891 5634.0943 7766.9897 5862.3642 4064.8947 5228.0151 4062.7143 3061.4337 4314.9394 6830.1227 4927.2216 86572402 amyA Carbon cycling Carbon degradation Starch Rhodopseudomonas palustris HaA2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1513.7796 1574.8397 1442.884 1377.2587 3034.6443 1418.4992 2996.7805 1432.6254 1833.1582 1262.3225 1338.6029 1478.2461 170140687 MFS_antibiotic Antibiotic resistance transporter Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 1467.3039 4511.9732 2536.9948 1558.1209 3609.213 2642.1329 2432.7894 3081.3604 2809.2458 2972.922 1931.6196 228847655 SMR_antibiotics Antibiotic resistance transporter Bacillus thuringiensis IBL 200 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus thuringiensis; 981.2696 820.646 743.0404 960.4704 934.6293 811.3038 789.3122 813.625 824.5117 846.361 1353.6182 1039.1543 218751178 CODH Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 1169.5031 1377.7518 1439.8119 1377.7693 1024.2677 1660.7637 255293460 fnr Stress Oxygen stress Propionibacterium sp. oral taxon 191 str. F0233 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Propionibacteriaceae;genus:Propionibacterium;species:Propionibacterium acidifaciens; 1462.0787 1796.4964 1778.4408 1506.8236 2600.0538 1618.0011 1416.4928 1441.5462 1240.6001 1427.0723 3109.3363 1875.1247 260636481 nrfA Nitrogen Dissimilatory N reduction Prevotella sp. oral taxon 472 str. F0295 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Prevotellaceae;genus:Prevotella;species:Prevotella sp. oral taxon 472; 554.8613 497.3102 618.6865 628.7923 452.387 614.8762 448.4944 606.3717 581.2609 10956961 benD Organic Remediation Aromatics Aromatic carboxylic acid Novosphingobium aromaticivorans superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium; 1984.004 1125.3333 1030.3843 1654.7021 1232.1613 1401.1499 1621.959 1748.8737 1158.277 1441.4211 1023.9285 1099.2882 283484399 pec_CDeg Fungi function carbon degradation Marssonina brunnea f. sp. 'multigermtubi' superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Dermateaceae;genus:Marssonina;species:Marssonina brunnea; 839.604 847.5328 655.0184 706.943 809.7238 835.3087 451.3535 806.9192 662.5799 760.5692 742.7926 494.1706 260425299 sigma_70 Stress Sigma factors Citreicella sp. SE45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Citreicella; 1581.3978 1556.9109 1389.873 1348.083 1772.5649 1353.0505 1059.8032 1367.5044 1405.0947 1341.2469 2092.4949 1718.9055 213979897 nagI Organic Remediation Aromatics Aromatic carboxylic acid Salmonella enterica subsp. enterica serovar Typhi str. AG3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 1522.4075 2532.1114 1305.6022 1962.6362 2226.1276 1504.9316 3338.8456 1898.1359 1581.7164 118732140 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 4295.689 2483.0653 2999.4523 4136.0772 3541.1104 2738.616 3097.3859 4484.1367 2900.457 3176.2407 4312.3442 3430.7389 126731410 phn Organic Remediation Herbicides related compound Sagittula stellata E-37 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 3824.2691 12401.7174 8455.1325 4675.2803 3875.367 5962.8775 8176.1312 12858.3687 7097.5338 11002.1688 5284.2356 9218.3471 227069655 NiR Nitrogen Assimilatory N reduction uncultured archaeon superkingdom:Archaea; 4189.4328 5343.0617 4295.502 4627.8115 3679.1264 6177.5526 5058.0894 4265.9027 5578.8912 6368.2429 3070.5966 5053.0511 157850445 nahA Organic Remediation Aromatics Polycyclic aromatics uncultured bacterium superkingdom:Bacteria; 4893.0022 4697.5749 4263.7405 4329.3359 3605.4054 4401.6954 3301.7165 3638.736 4475.3525 3622.4688 11916.1793 4105.5396 117164580 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Streptomyces ambofaciens ATCC 23877 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces ambofaciens; 7647.1277 2805.7195 4041.2646 5849.6787 3717.7943 2099.3693 3344.9134 2389.686 3605.0895 3343.3467 7016.6497 2625.3916 163858674 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bordetella petrii DSM 12804 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella petrii; 1821.0703 2687.647 3039.683 2040.5888 2466.5787 2269.1231 2294.8599 3290.2076 2559.5975 2301.0256 3150.5625 2693.4491 219667227 fnr Stress Oxygen stress Desulfitobacterium hafniense DCB-2 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium;species:Desulfitobacterium hafniense; 1887.9228 1673.9003 1345.7748 2020.3575 730.8319 2135.6233 2492.1249 2301.8574 1614.1232 1785.1803 1115.6786 1120.4772 239801525 rubisco Carbon cycling Carbon fixation Variovorax paradoxus S110 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Variovorax;species:Variovorax paradoxus; 5925.2684 3625.9578 5444.1941 6567.5797 2322.8654 5343.089 3323.8426 4533.7521 4401.038 4521.4629 4696.9781 3765.0255 183176043 linB Organic Remediation Pesticides related compound Mycobacterium marinum M superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium marinum; 813.0435 964.2929 849.5276 1208.4504 1027.5562 870.3363 964.5773 650.8467 1005.7459 1066.9543 1111.5944 761.1429 291618619 CysJ Sulphur sulfite reductase Pantoea ananatis LMG 20103 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pantoea;species:Pantoea ananatis; 523.6746 653.8093 625.8907 1111.855 533.0527 793.8929 569.8631 302882339 phospholipase_A2_fungi Fungi function carbon degradation Nectria haematococca mpVI 77-13-4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Nectria;species:Nectria haematococca; 4352.8568 2485.6138 3935.2426 4113.4078 4182.8148 2759.3155 2973.3009 3284.0707 3486.946 3347.7462 4725.4473 3067.8479 217330181 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 7510.0108 4511.2851 5361.7406 9259.7734 4490.0731 5214.8388 4338.5563 3873.4519 5133.7678 6318.0553 5816.4286 4422.1733 119856217 Arylest Organic Remediation Aromatics Other aromatics Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 20504.9122 9887.2927 10719.163 12200.7279 6772.1944 11872.5855 10698.7172 13302.3534 10320.1189 12382.0739 9556.2905 9501.3158 99078670 phn Organic Remediation Herbicides related compound Silicibacter sp. TM1040 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 618.5707 1236.563 891.0088 840.3295 1711.8369 1237.2132 602.1667 1371.2079 1011.8702 1032.8237 220708574 mer Metal Resistance Mercury Geobacillus sp. Y412MC61 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 1274.5907 982.553 1203.6659 1260.8983 1731.8398 1046.9252 890.17 710.4724 1020.2022 1247.0914 17278.9417 1214.6674 198246834 CopA Metal Resistance Copper Acidithiobacillus ferrooxidans ATCC 53993 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus;species:Acidithiobacillus ferrooxidans; 1568.6237 1092.9162 878.4466 1178.946 1092.9793 776.7249 805.795 786.9472 981.6442 697.4006 1549.9713 972.6485 218778453 adpB Organic Remediation Pesticides related compound Desulfatibacillum alkenivorans AK-01 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfatibacillum;species:Desulfatibacillum alkenivorans; 2160.679 1515.0134 1497.4943 2743.0389 2268.3753 3058.043 2457.2642 1768.029 2829.1317 1076.2061 1217.51 17431022 rcnA Metal Resistance "Cobalt,Nickel" Ralstonia solanacearum superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 1294.0675 1439.4882 1140.1546 2444.9459 1671.3951 1658.2508 2498.685 1813.5414 2028.3186 2981.0869 94495092 amyA Carbon cycling Carbon degradation Starch Sphingomonas sp. SKA58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 15653.1037 15880.5752 20959.3082 23336.5964 16201.8143 19756.2094 14996.7721 13953.6722 19059.1043 17910.7729 23755.5921 19306.144 123964955 ureC Nitrogen Ammonification Prochlorococcus marinus str. MIT 9303 superkingdom:Bacteria;phylum:Cyanobacteria;order:Prochlorales;family:Prochlorococcaceae;genus:Prochlorococcus;species:Prochlorococcus marinus; 1594.593 1448.7967 1490.7334 1703.7161 2032.1589 1623.897 1280.2609 1190.9939 1217.4128 1432.6834 2415.1091 1873.4219 72119125 MFS_antibiotic Antibiotic resistance transporter Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 6148.1908 4448.0183 4425.9212 6220.4707 3316.3451 5972.8085 6640.3442 7111.6353 4790.4969 6027.348 4084.7832 4218.1106 162954000 sped_bac soil_benifit Renibacterium salmoninarum ATCC 33209 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Renibacterium;species:Renibacterium salmoninarum; 711.1099 2338.7049 1468.9388 1166.9058 1394.4738 1826.6862 1860.3218 1817.1539 2104.6599 2175.3249 2233.0309 149825377 type_III_secretion virulence secretion Limnobacter sp. MED105 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Limnobacter; 3302.1019 1222.1385 1808.334 2686.2216 1356.3462 1024.745 1351.9728 1057.6108 1359.7803 1409.6861 3262.5171 1660.4607 188592329 bphC Organic Remediation Aromatics Polycyclic aromatics Cupriavidus taiwanensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus; 5880.1225 6054.88 5885.0894 5418.8641 7903.4531 6014.1627 5059.0242 5984.7034 5797.5358 5749.0131 23503.3634 6713.6628 115390665 tre_fun soil_benifit Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 877.7654 1377.3046 1219.9792 608.5947 1570.2667 1136.2591 1251.8148 584.8817 857.3967 1098.4213 1164.4485 6048994 xylG Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia sp. RP007 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 7174.5527 7954.2343 7069.4178 7955.1937 3133.3666 7842.165 9842.1779 8412.5541 7542.5465 7310.7862 3994.683 4611.7621 262222096 sigma_38 Stress Sigma factors Grimontia hollisae CIP 101886 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;species:Grimontia hollisae; 508.7512 1388.4925 677.3532 509.6156 694.8847 575.9176 831.1786 672.3802 792.5237 1306.1731 933.5113 146329147 alkK Organic Remediation Others Dichelobacter nodosus VCS1703A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Cardiobacteriales;family:Cardiobacteriaceae;genus:Dichelobacter;species:Dichelobacter nodosus; 915.626 820.5186 1134.2253 1118.8549 1419.7848 1033.3748 958.1425 1149.0465 1098.6578 967.8073 1691.3801 1088.1925 196166670 BchY other category chlorophyllide reductase uncultured bacterium superkingdom:Bacteria; 1428.2629 2568.3321 1902.31 1613.2054 2319.3105 2206.4488 2296.2994 1971.8404 2218.1905 2535.1247 1274.6013 2262.5212 193247578 iron_permease_high_affinity Fungi function iron Rhizomucor miehei superkingdom:Eukaryota;kingdom:Fungi;order:Mucorales;family:Mucoraceae;genus:Rhizomucor; 589.6678 449.4299 483.9047 848.2192 537.1029 488.9788 539.8443 71557067 tfdA Organic Remediation Aromatics Chlorinated aromatics Pseudomonas syringae pv. phaseolicola 1448A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas savastanoi; 1100.6156 799.7483 711.8823 1155.2903 594.1529 1098.4347 1438.2518 1422.0826 1006.1536 1305.5366 793.941 453.9899 256393613 Tet Antibiotic resistance other Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 2144.9633 4191.7782 2142.3787 3262.3258 3440.1319 3479.1317 3182.8964 2453.4513 3424.6708 3332.7385 1482.0057 3812.2373 197121174 sigma_70 Stress Sigma factors Anaeromyxobacter sp. K superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter; 586.847 953.1304 769.9105 909.088 945.9497 604.2816 892.0057 821.3705 780.3819 39647465 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 2739.3693 2835.741 3176.834 2724.876 1682.9242 3242.5531 3291.9783 11612.5647 2751.4438 2405.2309 2711.7291 1935.6295 66866389 pilin virulence pilin Bergeriella denitrificans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Bergeriella; 3249.2727 2835.9831 3594.7861 3579.403 2730.0594 3532.5107 3008.8357 3183.8594 3303.4985 3327.3843 2990.3304 3163.1984 118502657 bclA Organic Remediation Aromatics Aromatic carboxylic acid Pelobacter propionicus DSM 2379 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter propionicus; 423.7511 713.5576 598.1108 625.3742 741.8853 828.5185 580.5312 1041.1369 679.7154 782.9914 671.9681 659.3038 110667993 atzA Organic Remediation Herbicides related compound Haloquadratum walsbyi DSM 16790 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloquadratum;species:Haloquadratum walsbyi; 1309.9714 786.6999 671.77 571.9119 462.7292 537.2999 807.2021 574.2343 639.5137 773.5561 620.9747 91712046 nifH Nitrogen Nitrogen fixation Methanococcoides burtonii DSM 6242 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanosarcinales;family:Methanosarcinaceae;genus:Methanococcoides;species:Methanococcoides burtonii; 473.4778 636.6199 466.1573 553.3589 376.5773 117999282 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 740.3479 418.0206 883.1284 749.6792 839.4334 763.3689 652.1283 568.4166 616.916 665.0291 1239.4533 1015.8368 111149084 amyA Carbon cycling Carbon degradation Starch Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 1924.499 1725.6478 1773.1048 2657.7445 2355.874 2173.6272 4147.0149 1269.605 1929.9841 1524.2985 1774.217 1465.0905 113875120 phn Organic Remediation Herbicides related compound Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 1494.5177 1055.9118 1852.8393 1057.2572 1178.1835 932.7489 979.741 2672.6718 1208.2277 1349.2086 2507.616 1529.9072 94425128 pstB Stress Phosphate limitation Sphingomonas sp. SKA58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 1281.3404 1042.0097 1062.4584 1471.4018 1022.7153 1214.7198 1543.0094 2308.7992 1171.3064 1173.0691 1323.5635 1166.2403 229865545 pstC Stress Phosphate limitation Stackebrandtia nassauensis DSM 44728 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Glycomycetaceae;genus:Stackebrandtia;species:Stackebrandtia nassauensis; 1796.1937 1233.0502 1540.4236 904.2751 571.2255 683.1897 872.5123 723.6086 897.8607 1802.7101 756.213 146339474 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1022.4262 751.5751 961.0183 662.0271 561.1662 467.785 870.5811 11331.3285 261338602 amyA Carbon cycling Carbon degradation Starch Bifidobacterium gallicum DSM 20093 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium gallicum; 1949.3711 2289.0514 1921.2525 2260.5619 2827.7073 3011.3538 3056.8577 1790.3187 2246.7459 2458.1785 2569.6316 2523.6761 111073745 endochitinase Carbon cycling Carbon degradation Chitin uncultured bacterium superkingdom:Bacteria; 450.589 403.0217 502.1088 358.5488 614.9706 83592229 TerZ Metal Resistance Tellurium Rhodospirillum rubrum ATCC 11170 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum rubrum; 3689.758 1506.4631 2125.2802 2999.6895 2267.9396 1997.2627 1078.1039 1952.0681 1765.3031 2035.8113 2950.6057 2490.9244 261352043 ferroxidase_high_affinity Fungi function iron Verticillium albo-atrum VaMs.102 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Plectosphaerellaceae;genus:Verticilium;species:Verticillium albo-atrum; 904.1011 1232.6129 970.3103 727.3101 1721.45 1218.6533 919.2011 1009.6779 949.2718 915.4255 1148.2078 1033.8948 40253061 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1739.4288 1926.4322 2491.6026 1456.677 1113.8727 2326.0318 1803.1657 2269.2364 2747.3667 2296.5702 844.8732 2217.0053 1255498 nifH Nitrogen Nitrogen fixation unidentified bacterium superkingdom:Bacteria; 507.5394 1234.0041 796.9528 1066.1583 982.9304 1266.6969 670.7228 884.3139 711.7461 709.1287 1218.644 1046.6147 160932276 ara Carbon cycling Carbon degradation Hemicellulose Clostridium leptum DSM 753 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium leptum; 665.6912 591.1286 896.9118 801.086 770.3834 385.8442 774.9639 585.3474 837.4502 1032.9619 720.1906 119226108 pheA Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 878.9558 447.047 777.855 716.424 535.506 820.0983 632.4603 610.0548 456.1941 856.3493 197782202 pcpB Organic Remediation Herbicides related compound Streptomyces sviceus ATCC 29083 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces sviceus; 4888.604 5211.7561 5667.6369 4553.1669 5517.8316 4420.4206 4414.0877 6980.6147 4306.5302 4649.8659 5620.3878 5115.959 145594127 CadA Metal Resistance Cadmium Salinispora tropica CNB-440 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora tropica; 5533.3408 3585.1052 3318.5503 4449.9697 2895.8795 2325.3588 3837.4105 2432.5109 2547.1914 3135.9187 3581.6119 3823.7862 119404508 per_fun soil_benifit Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 8795.8712 5789.1085 5564.9445 7189.4062 7401.0633 5559.4167 4673.6934 5198.2162 6853.1741 5375.0822 9912.0949 4913.0498 145903156 CopA Metal Resistance Copper Bacillus licheniformis ATCC 14580 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus licheniformis; 1537.1921 1170.8115 1300.7751 1547.6422 1564.1048 937.2407 995.2717 1286.5268 1056.1159 1038.6361 2005.8622 1465.9557 120405344 akbF Organic Remediation Aromatics BTEX and related aromatics Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 1124.7668 844.4922 855.0896 961.437 920.9899 121554515 phtA Organic Remediation Aromatics Aromatic carboxylic acid Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 1600.9955 1494.6635 1910.0522 1613.6232 1368.5303 1338.8394 2543.5192 1272.4133 1628.3922 1270.7641 211591486 CopA Metal Resistance Copper Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 2824.2844 1941.6963 4651.8793 2278.4497 4951.3017 2617.1144 2538.78 2791.3212 2155.3964 2119.5703 6308.02 4734.0074 226714321 sigma_70 Stress Sigma factors Laribacter hongkongensis HLHK9 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Laribacter;species:Laribacter hongkongensis; 1067.4244 2556.7937 2001.1421 1550.2996 1268.2981 2679.4638 2271.6442 2113.3818 2880.4674 2746.3101 2742.5011 119956473 chnB Organic Remediation Other Hydrocarbons Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 1093.4696 1786.9268 1399.7744 1459.3069 1041.6938 1923.932 1479.8888 1653.3347 2204.5146 2564.3416 1767.2709 166362924 fnr Stress Oxygen stress Microcystis aeruginosa NIES-843 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Microcystis;species:Microcystis aeruginosa; 1553.19 2352.7854 1311.9559 2011.6459 1748.8844 2282.509 2201.8364 1329.9569 1930.2288 2096.2664 2137.646 114227193 AceB Carbon cycling Carbon degradation Others Alkalilimnicola ehrlichei MLHE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Alkalilimnicola;species:Alkalilimnicola ehrlichii; 3128.3417 1269.9103 1828.3403 3280.6668 1022.1844 1874.3519 1449.0224 3719.9335 2833.2892 2341.8055 3679.4881 2256.6368 167574595 aoxB Metal Resistance Arsenic Burkholderia oklahomensis C6786 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia oklahomensis; 10183.1589 3197.8207 6371.2171 8638.7368 6201.0574 5457.2802 3211.156 3906.8355 6280.3959 4102.7592 10361.4511 5635.0006 39932996 mhpA Organic Remediation Aromatics Aromatic carboxylic acid Streptomyces hygroscopicus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 11601.6229 5283.0507 9470.3085 5445.888 6556.9658 7271.6724 7341.8977 8032.6736 7609.8773 9151.2851 7084.0147 7052.8656 218296501 fnr Stress Oxygen stress Thermus aquaticus Y51MC23 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Thermus;species:Thermus aquaticus; 4461.551 5375.5234 5285.0885 4756.9997 7212.2453 4724.7362 4217.3962 4709.4214 4950.1573 5363.5137 6285.7492 6136.8218 47779194 T4_recomb_endonuclease Bacteria phage REPLICATION Acinetobacter phage 133 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 1445.9868 2322.5855 1563.1692 1288.7316 1716.4257 2452.4423 1691.0213 1577.5983 1710.2269 1709.4271 2136.9164 1884.4902 156743774 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Roseiflexus castenholzii DSM 13941 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus;species:Roseiflexus castenholzii; 898.0162 1341.7401 1263.1469 805.9076 748.6362 1366.2419 1217.6105 1171.4838 1297.1673 1421.1429 1116.0142 119880085 nmoA Organic Remediation Aromatics Nitoaromatics Salinispora arenicola CNS205 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora arenicola; 1467.8814 1178.2021 1299.5683 942.9544 1689.6359 1131.4731 996.3957 979.6956 1083.3627 995.891 1867.9129 1211.097 23098272 pimF Organic Remediation Aromatics Aromatic carboxylic acid Oceanobacillus iheyensis HTE831 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Oceanobacillus;species:Oceanobacillus iheyensis; 1426.1742 1453.6707 1704.7256 1390.5864 2072.8271 1829.4083 1317.4818 1295.6776 1243.6754 1289.4904 2253.1715 1882.8698 146303395 ferredoxin_oxidoreductase Bioleaching Electron transport Metallosphaera sedula DSM 5348 11798.5135 12871.803 10382.8938 15217.9228 11158.6726 14271.3946 9318.7685 11345.6009 11867.2258 11277.4106 12662.5036 11776.9857 119821285 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Stenotrophomonas maltophilia R551-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 3251.4219 2400.2132 1077.9429 2678.099 2425.9484 1208.9766 2839.6613 1510.0443 1289.0131 1975.6353 2530.8959 3411.6647 117991566 PobA Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 428.251 1125.9067 533.3973 644.0576 992.3347 1162.4273 796.5701 1067.1591 1388.2577 911.2375 108464243 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 590.8465 480.8797 911.1763 696.0357 498.5076 720.2445 818.4776 644.6838 641.4792 90954655 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 732.8032 945.0333 595.0859 508.6428 110825676 tftH Organic Remediation Aromatics Chlorinated aromatics Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 2888.1656 3207.1674 3608.8603 2750.4083 3876.2391 2646.2834 2306.0835 3277.9097 2545.0713 2536.325 4584.2547 3305.6578 32307987 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 765.8021 978.4881 935.4705 844.3291 1502.7138 1169.3723 831.4768 1387.3796 1004.15 969.0468 1074.0344 108762333 sigma_24 Stress Sigma factors Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 619.4743 514.1761 1095.9527 1059.459 877.0756 627.4117 895.2813 571.5659 41398045 SMR_antibiotics Antibiotic resistance transporter Mycobacterium avium subsp. paratuberculosis K-10 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium avium; 6856.6908 8038.7557 11974.4295 8025.7771 8288.1231 6019.3375 7794.5817 13418.4697 13337.042 9014.6412 7226.4325 11589.8413 226240190 AceB Carbon cycling Carbon degradation Others Rhodococcus opacus B4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus opacus; 2540.2892 2633.4274 2333.602 3483.3628 4051.7286 2478.1971 2213.903 1992.9806 2256.8649 2877.4377 2991.8079 2100.9669 221075777 ChrA Metal Resistance Chromium Blautia hansenii DSM 20583 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;genus:Blautia;species:Blautia hansenii; 2041.0913 2239.3384 3786.082 881.2577 1751.5767 2046.2296 2235.7882 3638.9075 2734.4131 2456.6971 1268.0666 2898.9674 295799303 CysJ Sulphur sulfite reductase Mycobacterium abscessus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 2234.5701 3106.8133 2348.8684 2200.2539 4282.2292 2209.2606 2839.1624 2016.711 2151.1509 1604.6133 4002.1266 2303.9517 260606219 pilin virulence pilin Vibrio coralliilyticus ATCC BAA-450 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio coralliilyticus; 1630.0899 1456.4613 1517.457 1813.3605 3064.4866 1873.4545 1212.036 1457.536 1852.542 1381.9821 3282.0491 2548.3806 116634743 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1433.7365 585.1127 987.5509 1485.0993 832.3236 797.5141 839.0472 694.4584 1001.296 1216.6182 1768.4991 975.2027 83852898 sigma_70 Stress Sigma factors Oceanicaulis alexandrii HTCC2633 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Oceanicaulis;species:Oceanicaulis alexandrii; 1009.6789 1330.6541 1414.5029 1225.2984 1621.4953 1286.2408 1231.4895 2157.3445 1228.7764 1566.798 1569.167 1527.0509 84043021 pcaG Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 3574.2 5921.4017 6216.0081 4408.2333 6689.6067 7056.3766 3256.7647 6157.504 4327.0091 4370.9057 15212.5231 7824.1566 120592253 pstB Stress Phosphate limitation Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 3223.5163 3212.5527 3083.3232 3599.6136 1661.4146 4151.02 4542.2794 3043.2139 3501.1053 3449.6959 2278.0129 1990.964 89350403 ArsC Metal Resistance Arsenic Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 587.5555 979.3418 974.4072 454.5654 515.4685 412.7791 1554.9996 646.2247 675.9052 840.7649 708.96 261285510 proV Stress Osmotic stress Geobacillus sp. Y412MC10 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 918.9908 1415.6313 1721.824 1039.8203 2626.8816 1454.5588 1165.4382 1740.9212 1116.236 1281.205 919.3014 1554.4881 163665105 MFS_antibiotic Antibiotic resistance transporter Methylobacterium extorquens PA1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 3059.5952 890.9467 1783.4133 2290.8836 1347.4732 1165.0799 1218.0923 950.6817 1433.2618 2307.8595 2234.5043 1969.4934 1232061 pap virulence adhesin Escherichia coli superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia; 509.1378 806.2597 504.562 605.9457 673.5564 741.1832 488.172 682.8284 627.1131 83772446 ara_fungi Carbon cycling Carbon degradation Hemicellulose Aspergillus oryzae superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus; 921.8183 863.7541 883.7972 740.2964 1104.6963 897.0931 929.7652 701.4305 1074.6843 728.1977 1499.3034 1007.7759 9796012 cellobiase_fungi Fungi function carbon degradation Agaricus bisporus superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Agaricaceae;genus:Agaricus; 597.1059 563.1317 457.3186 473.2883 639.5799 640.4371 490.196 491.316 81159377 INF1_elicitin_Oomycetes soil_borne_pathogen oomycete elicitor Phytophthora ramorum superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 604.3325 1048.0115 593.3419 486.1107 1651.641 665.2508 935.3856 900.9287 679.8134 254266033 sigma_24 Stress Sigma factors Methylobacterium extorquens DM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 2893.4109 4205.9862 3131.7034 3759.0528 2704.9001 4324.8051 3815.2386 3715.6849 4737.3661 5517.1194 2477.297 4093.9839 40217357 ZntA Metal Resistance Zinc Gordonia westfalica superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Gordoniaceae;genus:Gordonia; 860.8943 1616.5715 1082.6828 1239.4342 1282.8591 1242.6133 1383.6077 715.7175 1481.2321 1421.7794 1207.2342 118169656 glnA Stress Nitrogen limitation Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 997.8764 1311.9607 1159.5531 1248.9677 32635.4215 1052.4889 1243.7397 1052.3818 1232.1196 960.7502 960.1913 995.0734 262185100 sigma_70 Stress Sigma factors Aeromicrobium marinum DSM 15272 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Aeromicrobium;species:Aeromicrobium marinum; 1287.2513 2042.7081 2741.3182 1985.1032 1633.7045 1976.3493 2681.2007 2214.4298 1834.3122 299077555 cat_bac soil_benifit Ralstonia solanacearum superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 18661.316 17128.8996 19168.8723 21813.4454 19214.1811 21604.9112 14878.0475 15722.1185 19234.0481 23246.7502 24821.4755 12301.8955 238787968 cda Carbon cycling Carbon degradation Starch Yersinia frederiksenii ATCC 33641 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia frederiksenii; 2269.8836 1450.9693 1844.049 2380.8901 1973.6317 1069.0711 1515.2613 1694.5125 1781.1269 1445.272 1272.7965 115378016 ppx Phosphorus Phosphorus utilization Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 1879.3127 1142.9562 1808.3631 2511.496 1398.3226 1786.6183 1667.794 1986.8921 1722.6797 1959.1871 1471.2907 2158.8213 256582982 ppx Phosphorus Phosphorus utilization Cryptobacterium curtum DSM 15641 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Coriobacteriales;family:Coriobacteriaceae;genus:Cryptobacterium;species:Cryptobacterium curtum; 779.9598 628.8196 632.5278 468.6464 580.5779 528.8056 482.7245 1179.4887 357.6096 461.0738 1052.4698 674.3682 161162883 glucoamylase Carbon cycling Carbon degradation Starch Sorangium cellulosum 'So ce 56' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Polyangiaceae;genus:Sorangium;species:Sorangium cellulosum; 3566.369 3626.0598 4169.2556 4147.4325 2217.3366 4019.3079 3164.1655 6127.1828 4216.682 3578.9811 4107.6066 4383.3794 240169491 amyA Carbon cycling Carbon degradation Starch Mycobacterium kansasii ATCC 12478 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium kansasii; 4485.3799 3348.1064 5411.1894 1605.5965 1057.5819 3991.1752 3273.775 5939.9539 3673.5154 3745.551 1332.7649 5099.2742 87200070 dnaK Stress Heat shock Novosphingobium aromaticivorans DSM 12444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium;species:Novosphingobium aromaticivorans; 1431.6948 2086.3895 2266.8948 1785.2258 2652.6173 2036.1183 2105.6471 2474.2807 2444.2688 2222.457 84499300 CopA Metal Resistance Copper Oceanicola batsensis HTCC2597 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola batsensis; 1273.3415 5242.3382 1955.9743 2148.8028 2150.9214 3055.4351 2230.7758 2830.2694 2885.3282 2934.8214 1532.8418 4609.8258 121610187 sigma_24 Stress Sigma factors Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 1097.5799 986.8641 746.9564 916.3474 932.0895 1020.379 160900323 tfdA Organic Remediation Aromatics Chlorinated aromatics Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 1570.8534 1312.5374 1181.2314 2114.8978 1212.6669 1200.5627 1317.0716 302896818 endopolygalacturonase_fungi Fungi function carbon degradation Nectria haematococca mpVI 77-13-4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Nectria;species:Nectria haematococca; 2318.6965 513.2192 876.5129 1105.4177 704.4024 821.1451 720.1124 626.2024 1145.1603 1203.0621 1431.7943 1112.5125 261837422 glnA Stress Nitrogen limitation Halothiobacillus neapolitanus c2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Halothiobacillaceae;genus:Halothiobacillus;species:Halothiobacillus neapolitanus; 658.0348 609.2725 517.0823 707.9018 1094.6098 410.3377 838.3933 594.9734 418.4402 358.9789 774.9616 592.6999 83955054 pimF Organic Remediation Aromatics Aromatic carboxylic acid Sulfitobacter sp. NAS-14.1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sulfitobacter; 1169.4695 3536.4414 1049.1402 1054.1067 2697.6765 1292.328 2125.4561 1195.8295 1087.8942 1631.3289 1801.9894 1000.8548 147832086 nifH Nitrogen Nitrogen fixation Clavibacter michiganensis subsp. michiganensis NCPPB 382 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Clavibacter;species:Clavibacter michiganensis; 1492.2611 1182.6875 1179.2686 1554.4636 742.8156 2236.5483 2578.1287 908.6072 1658.6338 2052.3599 1396.1178 983.6069 72121507 vanA Carbon cycling Carbon degradation Others Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 3546.6369 1807.8883 1640.5483 4213.4819 1858.4895 1759.0688 1840.203 1845.95 1852.8449 2318.1661 2909.6438 2571.6157 261419939 sped_bac soil_benifit Geobacillus sp. Y412MC61 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 2433.2204 2198.8681 2537.8963 708.0935 1566.0007 2713.6988 2095.0256 2603.1328 2335.8971 2507.5491 3091.534 3378.0479 148240266 amyA Carbon cycling Carbon degradation Starch Synechococcus sp. WH 7803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 2741.7871 1165.2939 1017.197 1917.8316 1788.2444 914.6518 1125.2523 1422.8814 1249.9309 1237.6558 2242.937 1159.793 118424427 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 955.8557 1367.8241 953.568 862.4579 1089.0474 835.7418 734.0053 261286292 amyA Carbon cycling Carbon degradation Starch Geobacillus sp. Y412MC10 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 817.6105 1608.1105 1071.3784 980.1127 1612.4327 1700.0812 1084.5789 719.4053 1291.4244 1121.7704 1250.0001 1288.7946 34104649 hly virulence hemolysin Chromobacterium violaceum ATCC 12472 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Chromobacterium;species:Chromobacterium violaceum; 1009.867 1342.5939 1979.4637 1200.9305 1545.2022 1398.3381 1335.3754 1866.9872 1260.4615 1609.331 1723.1763 260568969 narI Stress Oxygen limitation Ferroglobus placidus DSM 10642 superkingdom:Archaea;phylum:Euryarchaeota;class:Archaeoglobi;order:Archaeoglobales;family:Archaeoglobaceae;genus:Ferroglobus;species:Ferroglobus placidus; 872.9203 670.475 1060.7427 864.6563 1151.9814 1091.8988 834.2182 650.5477 729.7243 851.2073 1140.1596 1036.6001 94554937 hly virulence hemolysin Deinococcus geothermalis DSM 11300 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus geothermalis; 1738.1258 1226.3308 1361.5065 1640.4156 1921.7764 1525.9751 1223.6668 1179.4524 1305.7642 1160.9981 1853.9066 1471.4898 154684784 TerZ Metal Resistance Tellurium Bacillus amyloliquefaciens FZB42 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus amyloliquefaciens; 1940.5237 3128.361 2715.4234 2208.8766 3957.1964 2154.5131 2528.6232 2198.3659 2370.4887 1819.4278 3536.83 3076.5816 71906985 proO Organic Remediation Aromatics Other aromatics Dechloromonas aromatica RCB superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Dechloromonas;species:Dechloromonas aromatica; 2942.1701 1263.0039 2211.3394 2578.0249 2062.9302 1657.1268 1775.2013 1355.5212 1501.4664 2125.2433 2284.0671 1816.982 226906221 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter; 3163.7493 4602.4058 4387.6533 3359.0029 2550.2471 4400.7681 4218.3827 4062.4844 4633.8304 4584.6204 1956.9481 4393.61 24346017 ArsC Metal Resistance Arsenic Shewanella oneidensis MR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella oneidensis; 1498.1981 786.6614 1105.6368 555.3265 1280.0788 115258173 MFS_antibiotic Antibiotic resistance transporter Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 361.6264 656.2305 811.3641 543.4931 688.1538 912.7892 740.7694 916.2005 1011.4793 787.1657 160346615 proO Organic Remediation Aromatics Other aromatics Burkholderia multivorans ATCC 17616 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 1686.2234 809.4708 1042.2049 1215.5184 1839.037 1021.4098 1951.4872 1146.5409 2288.4452 1410.2891 1749.2266 154508447 narI Stress Oxygen limitation Actinomyces odontolyticus ATCC 17982 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Actinomyces;species:Actinomyces odontolyticus; 3840.2132 3927.0389 4080.5357 4086.136 4086.0643 4761.3791 3214.5542 3446.038 3669.5081 4347.9475 5045.0466 4690.4347 727418 rubisco Carbon cycling Carbon fixation Rhodobacter capsulatus superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter; 539.189 833.2739 680.1369 705.5778 683.4076 592.628 551.3546 1227.8494 764.4798 28556672 catechol_B Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 1354.7815 2092.1364 1245.0888 1322.6878 1534.8313 1633.0771 1728.116 2785.8709 1881.3809 1951.4376 1210.5517 1955.6238 163259281 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bordetella petrii superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella; 3174.2265 1409.7726 2258.2584 3177.8121 1576.6371 1813.0461 2212.6413 2193.8873 1841.3474 2526.7889 21037.4063 2351.3763 238497483 NRPS Fungi function iron Aspergillus flavus NRRL3357 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus flavus; 877.4648 484.1083 751.7202 523.6044 388.7122 110830914 ureC Nitrogen Ammonification Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 6839.9676 7951.5456 6592.2609 8447.6471 6122.6408 6042.2805 6739.9861 5913.8934 5824.2002 8123.1566 6716.6064 6862.5489 37962697 aoxB Metal Resistance Arsenic arsenite-oxidising bacterium NT-26 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae; 20097.2325 1034.5999 791.3222 647.2649 975.4117 187725781 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 1682.4087 3490.1986 2291.7719 1594.296 5077.4205 2890.3774 2777.2174 2445.6562 2634.6865 2954.8212 1836.2485 2453.9981 77378451 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 4305.9492 3900.0119 4060.9365 6618.2194 1966.8622 3959.4977 3141.2365 3062.4173 3452.4885 3812.4045 3416.683 2954.968 145223059 tfdA Organic Remediation Aromatics Chlorinated aromatics Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 1589.8198 605.1949 845.5874 1423.5975 809.9703 499.0877 15195.7667 719.6071 434.2827 850.4591 1330.2423 705.5382 121701135 Catechol Organic Remediation Aromatics Other aromatics Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 1636.5642 1798.102 2557.8299 1474.3057 1671.8329 1531.4641 1424.3155 3205.1145 1594.9025 1562.298 2667.7881 2125.3556 116634749 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1104.9139 1095.6814 959.577 756.6239 1749.2068 1134.8083 934.5139 1353.294 1435.6965 1302.1978 543.8678 151574 pheA Organic Remediation Aromatics Other aromatics superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 662.028 435.0701 675.5883 805.7803 478.6376 430.4788 641.9138 460.3297 469.6161 748.7838 226365446 sigma_24 Stress Sigma factors Rhodococcus opacus B4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus opacus; 3375.7244 2536.4821 2909.4528 2983.047 2880.4654 2385.5578 3801.4743 1771.7992 3378.0052 2811.2765 3126.2496 2360.0414 258533374 iro virulence Iron oxidation Pantoea sp. At-9b superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pantoea; 2908.455 5587.4958 4378.2026 3289.9948 6945.4656 4718.7088 3932.0858 3555.5332 4374.3853 5079.8301 1852.9216 4451.3957 87200825 proO Organic Remediation Aromatics Other aromatics Novosphingobium aromaticivorans DSM 12444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium;species:Novosphingobium aromaticivorans; 414.9932 383.5136 367.981 560.86 473.3039 480.1109 380.4298 57238575 ArsC Metal Resistance Arsenic Campylobacter jejuni RM1221 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Campylobacteraceae;genus:Campylobacter;species:Campylobacter jejuni; 2549.9336 1644.7198 1675.6612 2867.9467 1738.8738 1503.1219 1817.0332 736.9686 2084.2393 2333.1961 1849.1978 2242.6298 165977352 dnaK Stress Heat shock Actinobacillus pleuropneumoniae serovar 3 str. JL03 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Actinobacillus;species:Actinobacillus pleuropneumoniae; 857.4507 1495.084 565.8174 1382.9275 901.58 610.4471 1150.0632 936.9472 798.0103 772.8128 51891983 sigma_24 Stress Sigma factors Symbiobacterium thermophilum IAM 14863 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XVIII. Incertae Sedis;genus:Symbiobacterium;species:Symbiobacterium thermophilum; 1469.2247 837.075 864.4216 968.0809 552.5773 678.2723 1139.2947 1292.5436 211958594 pimF Organic Remediation Aromatics Aromatic carboxylic acid Pseudovibrio sp. JE062 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pseudovibrio; 2603.2867 907.9708 978.6092 2079.3391 987.6401 756.0199 1235.1829 920.9173 1221.9851 1744.4897 1130.1173 1573.2465 299136718 sod_CuZn soil_benifit Acidobacterium sp. MP5ACTX8 superkingdom:Bacteria;phylum:Acidobacteria;class:Acidobacteria;order:Acidobacteriales;family:Acidobacteriaceae;genus:Acidobacterium; 12659.591 8911.4041 11584.4951 9958.7581 10655.4865 10185.2769 10627.2462 11373.1866 15564.8661 11114.6484 10078.7776 10814.4167 237903796 endochitinase Carbon cycling Carbon degradation Chitin Uncinocarpus reesii 1704 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Onygenaceae;genus:Uncinocarpus;species:Uncinocarpus reesii; 15395.8171 28112.7529 16017.9622 15633.3139 27326.1891 22226.4198 18990.2465 19028.9211 22009.6984 18159.9188 12304.2727 17929.1602 258558311 pstC Stress Phosphate limitation Nakamurella multipartita DSM 44233 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nakamurellaceae;genus:Nakamurella;species:Nakamurella multipartita; 2438.5261 3501.2719 3381.8116 2680.318 3085.6265 3864.1364 2672.1616 2575.1114 3484.2085 3807.402 3873.7271 3596.8454 149235319 chitin_synthase Fungi function major biomolecule Lodderomyces elongisporus NRRL YB-4239 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Debaryomycetaceae;genus:Lodderomyces;species:Lodderomyces elongisporus; 4468.2671 2907.3924 1262.0273 4579.1648 3239.8054 3505.365 3305.2952 2441.7949 5004.185 4776.0691 5206.2997 4080.5948 13423440 pcc Carbon cycling Carbon fixation Caulobacter crescentus CB15 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter;species:Caulobacter vibrioides; 2521.1079 989.727 913.955 2288.1578 1143.0704 770.2581 1602.4367 996.0001 674.1006 812.1247 1620.939 121583098 CopA Metal Resistance Copper Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 1149.8584 813.0387 1812.2742 578.5424 673.3088 851.7307 855.5299 1838.7116 1202.0188 894.4214 1349.4504 86569049 sigma_38 Stress Sigma factors Frankia sp. CcI3 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 773.9421 604.1118 611.4435 904.0366 876.9528 510.7535 598.0577 612.7806 788.798 219550340 AceA Carbon cycling Carbon degradation Others Vibrio parahaemolyticus 16 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio parahaemolyticus; 1714.9686 875.4135 965.3637 1306.9356 877.125 915.953 852.8573 975.6044 810.9291 820.6782 1665.6258 1030.9149 89901567 narI Stress Oxygen limitation Rhodoferax ferrireducens T118 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Rhodoferax;species:Rhodoferax ferrireducens; 4681.384 2089.3331 3741.8675 4317.2544 2272.7175 2648.7287 2206.2639 2385.28 2454.0465 3393.7297 3181.7945 3089.4214 260862033 nrfA Nitrogen Dissimilatory N reduction Selenomonas sputigena ATCC 35185 superkingdom:Bacteria;phylum:Firmicutes;class:Negativicutes;order:Selenomonadales;family:Veillonellaceae;genus:Selenomonas;species:Selenomonas sputigena; 1272.24 742.6234 520.9417 1278.6503 534.9424 983.1217 1274.5258 1276.3108 598.301 812.5044 1019.6762 692.5086 111223515 camDCAB Carbon cycling Carbon degradation Others Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 2227.4376 4556.8907 3398.3867 3515.2095 2105.2668 4669.6672 3684.8029 3554.5407 4843.0919 4075.1288 1917.7399 3672.3413 296825494 cellobiase_fungi Fungi function carbon degradation Arthroderma otae CBS 113480 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma;species:Arthroderma otae; 1040.6672 2152.9439 1839.0705 1258.5834 1015.0935 1985.6716 2112.1736 1560.858 2250.6211 2802.0865 2496.3899 170778335 phdCI Organic Remediation Aromatics Polycyclic aromatics Leptothrix cholodnii SP-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Leptothrix;species:Leptothrix cholodnii; 3920.31 1644.8727 2705.9 3346.8258 2604.9644 2557.3458 3498.4194 6214.1641 2447.8842 2618.6069 2820.4644 2779.6196 92111140 dsrB Sulphur sulfite reductase Desulfomicrobium thermophilum superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfomicrobiaceae;genus:Desulfomicrobium; 1177.6632 2930.8132 1651.7728 1318.7703 3000.8774 1571.7712 1994.2941 1976.6761 1336.0165 1970.6662 2444.5995 1405.8492 239593743 endochitinase_fungi Fungi function carbon degradation Ajellomyces dermatitidis SLH14081 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces dermatitidis; 2664.5648 1907.1273 2960.0648 2494.511 1032.5742 2001.7496 3246.9691 2912.5422 2246.3226 2351.8441 1604.007 198267675 per_bac soil_benifit Octadecabacter antarcticus 238 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Octadecabacter;species:Octadecabacter antarcticus; 1312.8727 1163.854 1405.4303 2390.8756 1241.641 1217.3123 906.6463 1421.6012 1449.2265 2255.3097 2320.8218 85672142 pimF Organic Remediation Aromatics Aromatic carboxylic acid Roseovarius sp. 217 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 2394.9786 1400.1392 707.0261 1591.94 1211.666 649.831 833.8053 973.5587 1050.7224 833.9551 2230.0358 746.282 84498557 phzF soil_benifit Janibacter sp. HTCC2649 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Intrasporangiaceae;genus:Janibacter; 2578.7727 709.4818 1715.2813 2688.7419 1285.1342 1215.2283 2003.0573 1816.694 1433.2036 1995.8242 1367.9849 1570.349 94314073 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 1985.1189 952.947 1718.7243 775.5461 649.5217 793.9118 1030.0252 930.8129 1864.2372 1229.7455 217401621 bco Organic Remediation Aromatics Aromatic carboxylic acid Bifidobacterium angulatum DSM 20098 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium angulatum; 1876.3576 651.2227 1427.414 2011.4815 834.4977 1104.4471 1334.4233 1664.7369 1003.5326 1679.9477 1041.681 40741685 tftH Organic Remediation Aromatics Chlorinated aromatics Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 652.8499 120403007 chnB Organic Remediation Other Hydrocarbons Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 1702.1676 3059.016 2787.4666 1828.4004 2017.2567 3278.8969 2587.1213 2537.5155 3188.9429 2779.1841 2217.8313 2751.1387 301109691 pectin_lyase_Oomycetes soil_borne_pathogen oomycete carbon degradation Phytophthora infestans T30-4 superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora;species:Phytophthora infestans; 2715.3523 1359.2993 1635.7357 2804.8833 1662.1072 1277.1754 1230.012 1342.2953 1300.8467 1407.3132 1105.9622 4928216 groEL Stress Heat shock Chloroflexus aurantiacus superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus; 1713.9477 2817.6678 2213.5058 1888.1627 3828.2146 2465.7235 2376.3329 2922.7582 3258.0677 2771.4011 1528.2291 2227.9774 219680291 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid gamma proteobacterium NOR51-B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 492.6995 766.4265 726.8143 732.2149 1609.6835 683.6818 671.8342 834.0086 686.6466 697.2108 854.7473 670.0288 150958043 xylA Carbon cycling Carbon degradation Hemicellulose Klebsiella pneumoniae subsp. pneumoniae MGH 78578 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella pneumoniae; 962.236 1230.3192 1103.9109 688.8367 642.8489 877.2047 902.7227 613.6298 1183.6201 1001.9121 196166714 BchY other category chlorophyllide reductase Chlorobium sp. enrichment culture clone D12 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium; 1898.8701 2262.8357 2126.7923 2655.0871 2176.1376 1947.0694 2023.3482 2049.1807 1776.7424 2193.2359 2065.8997 2619.5691 219858713 atzC Organic Remediation Herbicides related compound Arthrobacter chlorophenolicus A6 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter chlorophenolicus; 3226.1423 3096.0714 1582.1432 3572.561 2387.745 2438.7723 2247.1094 1898.1799 2889.2857 2391.6078 3152.7247 2765.8049 289620994 nitrate_reductase_fungi Fungi function nitrogen Sordaria macrospora superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Sordariaceae;genus:Sordaria; 2122.8403 1385.5617 1494.7464 2038.178 1035.7977 1925.3121 2175.6946 1281.185 1652.2549 902.9568 104779782 cat_bac soil_benifit Pseudomonas entomophila L48 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas entomophila; 2913.7071 3260.5905 2853.1414 3525.6196 3403.0091 3263.3723 2424.4276 2146.2086 2518.1389 2578.9809 3816.7167 3301.3802 94425371 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Sphingomonas sp. SKA58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 1157.3603 684.6575 790.1509 962.6687 578.845 1054.9721 648.4361 875.0923 1370.1712 1226.2163 255715245 AceB Carbon cycling Carbon degradation Others Lachancea thermotolerans superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Lachancea;species:Lachancea thermotolerans; 836.6172 909.7211 429.5841 413.9437 576.2781 94470893 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 616.8514 806.5925 932.2404 480.7065 732.2823 497.3525 411.1946 596.5899 863.276 119459083 AceB Carbon cycling Carbon degradation Others marine gamma proteobacterium HTCC2080 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 1283.5097 499.382 1159.4367 1313.5241 889.2591 810.7654 782.6022 721.8262 773.7456 884.5726 1439.0017 1147.2416 145305192 nitA Organic Remediation Aromatics Other aromatics Salinispora tropica CNB-440 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora tropica; 16404.3139 21623.9974 18501.5536 17917.9926 13433.5325 22977.8087 16763.9824 13779.6733 21764.4184 22348.454 18544.8317 19257.4629 16082111 heat_shock_protein Bioleaching other category "Thermoplasma acidophilum DSM 1728,Thermoplasma acidophilum" superkingdom:Archaea;phylum:Euryarchaeota;class:Thermoplasmata;order:Thermoplasmatales;family:Thermoplasmataceae;genus:Thermoplasma;species:Thermoplasma acidophilum; 1045.6506 1863.6242 2433.1327 1534.0132 2967.1863 1977.326 1690.7689 2686.0954 1702.725 1015.6109 2041.9231 2248.5485 92438092 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium sp. KMS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 10684.5328 6455.1236 8874.9311 10562.2299 6222.8229 8649.9193 6991.9525 9538.2475 8158.8801 9410.0862 7736.7632 8380.9759 229748081 fnr Stress Oxygen stress Stackebrandtia nassauensis DSM 44728 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Glycomycetaceae;genus:Stackebrandtia;species:Stackebrandtia nassauensis; 882.1527 1275.1602 865.2726 1511.2456 851.9488 889.9085 1365.7205 1255.0681 1448.8803 89068463 pimF Organic Remediation Aromatics Aromatic carboxylic acid Oceanicola granulosus HTCC2516 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola granulosus; 3985.9402 2450.7629 3281.7073 1498.8791 1386.1696 3013.3929 2376.7344 3628.6067 2642.2583 2445.352 1361.6425 3264.8521 6855371 pstA Stress Phosphate limitation Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 1163.4384 1176.1761 2085.6165 1340.1582 1010.6876 1719.2182 1268.9769 1055.2741 1524.9086 229469826 obgE Stress Radiation stress Exiguobacterium sp. AT1b superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;genus:Exiguobacterium; 505.017 845.6165 597.0368 746.2192 793.2087 532.4563 119673183 pstC Stress Phosphate limitation Pyrobaculum islandicum DSM 4184 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Thermoproteales;family:Thermoproteaceae;genus:Pyrobaculum;species:Pyrobaculum islandicum; 2903.2836 1882.6871 2494.8885 2876.9459 3139.7749 2263.365 1719.3871 2219.8631 2061.7103 2412.9023 3779.1182 2447.2556 116222550 pcaG Organic Remediation Aromatics Other aromatics Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 3212.2712 1465.2537 2178.044 18589.883 1742.9501 2164.3394 2269.4878 2301.1433 1917.2635 2563.8057 2130.5259 2173.2677 162568595 aoxB Metal Resistance Arsenic uncultured bacterium superkingdom:Bacteria; 1028.323 2594.1294 2483.0145 1407.1193 3349.7708 1938.9032 2115.2017 3453.1553 2021.2768 3103.1228 1137.0605 2738.3264 256782151 ara Carbon cycling Carbon degradation Hemicellulose Streptomyces hygroscopicus ATCC 53653 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces himastatinicus; 5118.4332 10844.7104 7721.4928 6270.5052 7105.4841 8397.6474 7015.2019 6927.7633 9625.9596 9298.535 5841.222 9708.1336 148556163 tfdA Organic Remediation Aromatics Chlorinated aromatics Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 6710.9235 3572.6047 3881.7082 6558.0599 3978.6396 4957.8748 5160.983 4391.7327 4431.4068 4801.7408 4919.3018 4987.3555 144947590 ChrA Metal Resistance Chromium Petrotoga mobilis SJ95 superkingdom:Bacteria;phylum:Thermotogae;class:Thermotogae;order:Thermotogales;family:Thermotogaceae;genus:Petrotoga;species:Petrotoga mobilis; 808.1945 1731.2036 1983.9855 963.2373 988.757 1862.3719 9810.4961 1599.7975 1846.5311 1473.8708 1271.7423 1633.5315 85112953 tfdA Organic Remediation Aromatics Chlorinated aromatics Neurospora crassa OR74A superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Sordariaceae;genus:Neurospora;species:Neurospora crassa; 1706.6137 1199.6798 1812.1555 1602.9118 728.4822 1000.9346 1082.8812 1596.6323 1178.8782 1027.0454 1215.2925 1465.1867 150014349 nifH Nitrogen Nitrogen fixation Methanococcus aeolicus Nankai-3 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanococci;order:Methanococcales;family:Methanococcaceae;genus:Methanococcus;species:Methanococcus aeolicus; 5629.234 7199.9897 7654.2831 6944.9054 10057.1046 4657.2086 7693.2996 5528.5539 7348.5218 4166.783 7859.8893 5532.8868 302500826 sid_fun soil_benifit Arthroderma benhamiae CBS 112371 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma;species:Arthroderma benhamiae; 1407.6913 1771.4063 1319.9527 1618.8693 1271.872 1305.5718 1238.0792 910.6165 1323.7269 1370.1234 3091.8223 1759.5739 187478277 nagK Organic Remediation Aromatics Aromatic carboxylic acid Bordetella avium 197N superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella avium; 1119.9312 787.2605 1040.6346 1145.0446 954.9522 826.0059 735.6545 548.9802 906.0426 1066.9431 1606.1408 255297444 obgE Stress Radiation stress Corynebacterium tuberculostearicum SK141 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium tuberculostearicum; 1158.5625 702.65 1034.9787 1293.1148 1228.9381 780.5238 854.3599 416.0844 762.5044 1146.3812 1488.2761 845.7067 240169695 sigma_70 Stress Sigma factors Mycobacterium kansasii ATCC 12478 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium kansasii; 10447.211 16435.9594 16035.0752 10216.6825 21839.034 12735.2791 11246.2026 16952.0789 14723.9643 14600.1328 10459.6637 14655.5606 83318854 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3575.7044 2488.621 3850.8118 2418.8459 2253.4639 2480.5055 4753.8441 5818.9815 2436.1285 6298.8907 2999.2273 251771877 glnA Stress Nitrogen limitation Leptospirillum ferrodiazotrophum superkingdom:Bacteria;phylum:Nitrospirae;class:Nitrospira;order:Nitrospirales;family:Nitrospiraceae;genus:Leptospirillum; 2624.2679 2264.11 2707.354 2567.6695 3375.3092 2526.5956 2900.9467 2215.9171 2080.2787 2491.3801 4258.5532 2417.4014 259345838 cydB Stress Oxygen limitation Silicibacter sp. TrichCH4B superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 2936.6091 2723.7467 4150.1217 2707.4254 1337.5194 3748.2402 3201.9714 4402.8081 3192.0299 3326.061 1118.033 4505.46 227167883 obgE Stress Radiation stress Lactobacillus jensenii JV-V16 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus jensenii; 574.4489 1334.9483 688.665 714.6958 1614.5182 833.155 1781.9228 659.356 941.9796 814.6037 1361.6905 193212148 ppx Phosphorus Phosphorus utilization Chlorobaculum parvum NCIB 8327 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobaculum;species:Chlorobaculum parvum; 667.9613 1068.7691 959.5479 604.9649 1284.5654 793.5956 619.7938 1140.4525 860.6001 787.9158 866.7836 1121.8779 241771569 Tet Antibiotic resistance other Asticcacaulis excentricus CB 48 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Asticcacaulis;species:Asticcacaulis excentricus; 1596.0524 2815.9015 2702.5066 2479.6387 2140.7269 3547.441 4709.0446 2538.7944 4229.3844 2983.9203 1155.2231 3103.0678 126666996 pilin virulence pilin Marinobacter sp. ELB17 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter; 3316.0984 6101.0208 6539.7734 4298.571 4496.652 6690.2018 4600.5592 4468.5343 7218.1819 3173.5713 7669.4703 9659.8558 113525675 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 1639.2776 1665.9234 1153.7082 1444.6095 2370.5866 1873.649 1644.9568 1645.1643 2276.9011 1620.0397 1346.8962 39968131 iron_permease_high_affinity Fungi function iron Magnaporthe grisea 70-15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe;species:Magnaporthe oryzae; 14706.4313 16451.1485 16637.6787 18209.3252 11246.0381 22141.0941 17815.2938 14022.6908 22464.2166 16677.0813 15254.0136 14916.2555 315048899 sod_CuZn soil_benifit Arthroderma gypseum CBS 118893 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma;species:Arthroderma gypseum; 966.6956 533.5427 603.554 563.7987 613.359 432.6286 665.7772 1341.7501 99030465 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 4115.8305 2758.6995 3244.7479 4066.0966 3036.5971 3808.9477 3990.5037 3962.2973 3253.4314 3621.3801 3862.0511 3808.8454 150964700 glnA Stress Nitrogen limitation Pseudomonas aeruginosa PA7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 3050.0717 4059.1919 4427.9131 4701.7028 5968.4239 3232.7418 4095.4562 2477.1999 3142.0909 2550.9866 4044.3978 2659.9696 58198981 fnr Stress Oxygen stress Rubrivivax gelatinosus superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Rubrivivax; 483.8879 623.5569 692.6175 1010.1925 1005.3294 853.6717 715.8588 793.013 710.577 524.725 254788383 pstB Stress Phosphate limitation Teredinibacter turnerae T7901 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;genus:Teredinibacter;species:Teredinibacter turnerae; 848.5097 2349.5998 822.6732 566.4466 1488.096 989.9118 1405.2635 872.5486 914.5463 861.0226 1592.9994 798.6707 84689769 nitA Organic Remediation Aromatics Other aromatics Parvularcula bermudensis HTCC2503 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Parvularculales;family:Parvularculaceae;genus:Parvularcula;species:Parvularcula bermudensis; 2297.2318 2052.7365 2182.6094 2703.549 1725.7159 2470.8236 2642.511 2471.0146 2122.343 2495.1208 1892.0336 2267.8974 133911956 nmoA Organic Remediation Aromatics Nitoaromatics Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 2097.7622 3929.0395 3522.6556 2320.2648 5379.4459 3271.7777 2859.8833 3446.8247 3761.8959 3456.3735 2919.8062 3452.8343 67535763 pulA Carbon cycling Carbon degradation Starch Burkholderia vietnamiensis G4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia vietnamiensis; 10722.4656 8167.4682 12086.1073 8894.8165 8419.0007 11838.3805 8568.4665 10953.3015 10410.5263 9949.9654 9173.5786 11723.7454 99081230 sped_bac soil_benifit Ruegeria sp. TM1040 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 2093.034 2775.354 1803.2306 2723.5474 2950.1606 2362.7495 1948.0691 2440.7539 1603.4877 2235.847 3311.0228 2727.8486 33391353 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1218.4706 1997.1662 1707.1828 1313.9351 1448.6033 2159.0149 2184.849 1683.5227 2358.5368 2635.4496 710.3594 1948.5241 154274830 Sulfhydryl_oxidase Fungi function carbon degradation Ajellomyces capsulatus NAm1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces capsulatus; 668.6329 1297.1666 1023.5507 1103.8424 887.8371 1735.6623 1097.7123 929.4508 1325.4859 1600.0294 1132.7402 6166382 integrase_tyrosine Bacteria phage REPLICATION Pseudomonas phage D3 superkingdom:Viruses;order:Caudovirales;family:Siphoviridae; 2512.3903 4001.9779 3167.2234 2533.0148 3005.1433 2240.3771 5265.8783 1598.8413 3030.1097 2267.6491 2989.4775 1640.6174 117618319 nrfA Nitrogen Dissimilatory N reduction Aeromonas hydrophila subsp. hydrophila ATCC 7966 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas;species:Aeromonas hydrophila; 1883.1544 1459.94 1161.1815 1540.273 1165.1772 1871.3307 1860.1612 1016.6621 1235.4862 1313.3308 826.4223 1157.637 239817346 sigma_32 Stress Sigma factors Variovorax paradoxus S110 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Variovorax;species:Variovorax paradoxus; 713.3759 2337.8894 913.4723 641.5784 1123.5042 1153.0849 1105.5234 781.9602 965.7492 878.2804 1522.5352 830.5187 126319479 atzB Organic Remediation Herbicides related compound Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1137.9439 1529.5654 1667.6063 1304.6208 941.8322 1193.3622 943.323 1379.9718 1452.4593 1315.5306 1750.4487 149278018 pcc Carbon cycling Carbon fixation Pedobacter sp. BAL39 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Sphingobacteriaceae;genus:Pedobacter; 3594.4828 1981.9643 2814.888 3348.9079 3131.4707 2674.0796 2096.4594 2669.1373 1796.0563 2113.7866 5791.1787 3046.3155 260633275 glnA Stress Nitrogen limitation Prevotella sp. oral taxon 472 str. F0295 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Prevotellaceae;genus:Prevotella;species:Prevotella sp. oral taxon 472; 837.0873 1933.3897 933.3768 559.4609 1789.5147 1250.3008 2130.2048 664.4519 2042.21 1207.8525 1378.2194 163668310 glnA Stress Nitrogen limitation Chloroflexus aurantiacus J-10-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aurantiacus; 1081.2059 1399.604 1140.646 1429.1508 1444.4528 1980.5069 590.135 1710.5415 1231.3579 1940.4192 988.7978 124294947 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae; 2613.5087 1975.8096 3168.7355 2588.1747 3529.8295 2580.0943 1312.8937 2563.6607 2089.4464 2250.5421 4466.6303 2511.2208 159045313 atzB Organic Remediation Herbicides related compound Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 4276.6823 21547.4826 19957.7703 35456.2486 28300.3111 32662.6333 7247.8074 12825.8163 13623.6174 17781.1863 37383.4842 26738.3245 21106432 pobA Organic Remediation Aromatics Aromatic carboxylic acid Xanthomonas axonopodis pv. citri str. 306 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas axonopodis; 11341.6677 7951.8769 7326.4904 7767.0719 8169.3037 7836.4966 5795.8601 5858.2984 7873.2598 16281.5731 13320.7537 4919.9984 84391488 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Oceanicola batsensis HTCC2597 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola batsensis; 4188.4589 8236.5074 5985.8335 7556.3629 5430.2196 8597.9511 6803.8867 5407.7048 8049.5548 7097.5852 4591.39 7491.6416 153010557 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Ochrobactrum anthropi ATCC 49188 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum;species:Ochrobactrum anthropi; 1312.4563 955.1565 1388.8989 1397.8735 1414.1918 861.871 1108.976 1228.5231 963.2505 895.8396 1900.6825 1567.6574 89088964 sigma_24 Stress Sigma factors Bacillus sp. NRRL B-14911 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 775.4868 941.2161 2615.3917 1559.0112 2604.8506 564.9248 2020.8362 914.4657 766.8029 714.5856 1141.5427 17385544 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1291.193 1048.8397 770.3383 1047.799 1346.2408 1048.6302 825.0649 2475.8563 881.3236 824.3464 1213.6238 157918908 akbF Organic Remediation Aromatics BTEX and related aromatics Salinispora arenicola CNS-205 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora arenicola; 1198.6579 907.4483 779.2463 1120.7178 1601.8532 684.4695 831.4366 595.2034 823.341 884.7568 911.4934 1012.3281 162453147 glx Carbon cycling Carbon degradation Lignin Sorangium cellulosum 'So ce 56' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Polyangiaceae;genus:Sorangium;species:Sorangium cellulosum; 6407.7968 3038.1437 5140.6241 6875.3082 3932.7386 4071.0716 4937.0727 5066.8969 5466.1585 5911.0941 3526.98 4842.9187 118424530 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 895.0074 415.8288 597.8422 432.6333 446.1443 471.6222 94554288 ArsC Metal Resistance Arsenic Deinococcus geothermalis DSM 11300 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus geothermalis; 1051.7354 794.9633 1673.8426 19299.1734 959.3928 574.4692 967.0623 634.7894 87311367 sigma_24 Stress Sigma factors Blastopirellula marina DSM 3645 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Blastopirellula;species:Blastopirellula marina; 818.8194 901.2577 936.8227 1004.6724 811.3164 1021.2004 1205.4177 3795.9483 764.0537 1047.6251 1080.3864 954.357 186461326 Arylest Organic Remediation Aromatics Other aromatics Klebsiella sp. ZD414 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella; 7127.459 6021.7748 6138.4109 3962.7898 2638.6175 5830.3499 4859.5684 6730.6655 6442.0482 5112.8828 2439.1699 5392.7894 115375557 endochitinase Carbon cycling Carbon degradation Chitin Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 3713.963 1585.1739 1848.4193 3396.904 2196.3295 2073.2556 4744.6941 1550.4 2101.2351 1973.6253 1786.8779 5324.3062 218519231 CysJ Sulphur sulfite reductase Acidithiobacillus ferrooxidans ATCC 23270 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus;species:Acidithiobacillus ferrooxidans; 885.8734 1371.271 927.1394 1406.1673 1497.5568 1129.94 1648.1398 1229.3947 1143.413 1238.1303 1501.5617 1127.4807 149808847 iro virulence Iron oxidation Moritella sp. PE36 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Moritellaceae;genus:Moritella; 1747.9851 975.7994 1190.0133 1107.664 956.3 980.7885 888.7591 1010.3557 4038.1038 925.453 1439.8666 1023.0188 193201370 lysin Bacteria phage LYSIS Klebsiella phage K11 superkingdom:Viruses;order:Caudovirales;family:Podoviridae;genus:T7-like viruses; 4436.1505 3927.1663 4668.4398 4006.3343 6028.7531 4482.0555 3714.4956 3551.4057 2860.4895 3541.7968 6078.0805 4924.791 260428358 glnA Stress Nitrogen limitation Citreicella sp. SE45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Citreicella; 5373.0667 7323.9493 16311.8925 6495.8731 12093.3398 8878.0226 7056.2661 6519.5306 6042.4198 7916.6219 8289.281 8513.9325 32895234 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1196.8983 1142.9626 511.1606 726.2353 53692199 coat_Tombusvirus soil_borne_pathogen structural Grapevine Algerian latent virus superkingdom:Viruses;family:Tombusviridae;genus:Tombusvirus; 580.0872 626.0702 781.8273 951.7308 553.588 541.5783 407.2626 468.6134 552.3149 118579269 CadA Metal Resistance Cadmium Pelobacter propionicus DSM 2379 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter propionicus; 972.2621 1485.6163 1105.6116 821.6323 2214.1704 856.1577 2060.8673 854.0291 1356.4371 913.8509 1287.6947 902.4762 212527148 glnA Stress Nitrogen limitation Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 2633.4959 3555.1857 3266.1064 2872.371 1801.7436 3482.2426 3173.5711 2698.0181 4099.482 3946.4131 1860.8977 3530.5868 110669570 P450 Energy process Energy process Haloquadratum walsbyi DSM 16790 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloquadratum;species:Haloquadratum walsbyi; 1343.5521 1294.7965 1083.0353 1300.895 1037.5606 1490.5287 1375.5671 1447.0617 1063.4896 1289.4793 1413.0791 1422.4379 152970595 ChrA Metal Resistance Chromium Klebsiella pneumoniae subsp. pneumoniae MGH 78578 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella pneumoniae; 1662.8244 1330.6923 1596.5082 1744.5031 1879.8 983.3311 1120.2971 1237.4803 1086.0303 1348.4158 2743.9701 1950.7213 124259832 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 1375.5478 1031.4716 762.8141 1349.2062 1067.2512 1619.3322 2057.9194 840.8112 1127.5355 1100.2079 1180.3288 929.1856 119951100 pstA Stress Phosphate limitation Arthrobacter aurescens TC1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter aurescens; 714.4102 492.3215 648.1258 378.9748 378.7408 432.7781 427.3905 219965760 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 8100.7901 5467.3462 6830.1705 9407.8162 5129.3317 4213.6051 4968.7306 3216.2626 3794.9788 5019.4196 6823.4439 5810.4862 198256814 sir Sulphur sulfite reductase Verrucomicrobiae bacterium DG1235 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales; 1189.4368 1168.4537 600.6252 1328.8259 1330.3758 643.1985 632.4556 119391491 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 651.856 705.892 695.5192 509.7552 676.99 775.2666 479.4935 699.6898 512.2029 48697551 endolysin_transglycosylase Bacteria phage LYSIS Burkholderia phage BcepB1A superkingdom:Viruses;order:Caudovirales;family:Myoviridae; 664.3384 1526.2141 904.4869 715.5165 1389.4496 876.0945 1788.3461 717.0087 971.5912 805.7375 62424588 AceA Carbon cycling Carbon degradation Others Brevibacterium linens BL2 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Brevibacteriaceae;genus:Brevibacterium;species:Brevibacterium linens; 4387.492 2396.193 3582.3839 3380.6108 2827.4166 2276.003 2650.7983 3221.3706 2520.2299 2572.6104 4981.8619 2899.8051 91697165 Catechol Organic Remediation Aromatics Other aromatics Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 959.0257 1655.3344 1427.8647 1183.0826 1101.8524 1747.5974 1238.1423 1407.9206 1556.3328 1661.7017 946.7135 1692.1824 310800653 metalloprotease_fungi Fungi function carbon degradation Glomerella graminicola M1.001 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Glomerellaceae;genus:Glomerella;species:Glomerella graminicola; 3176.3891 1133.0043 1746.9628 2752.367 1110.8961 1994.1219 2746.3854 6564.7522 1655.3837 1789.8032 968.3356 2013.2722 66766792 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Xanthomonas campestris pv. campestris str. 8004 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas campestris; 2607.1955 3538.9899 2540.746 3478.2399 5013.1477 2812.9188 4261.9466 2683.5051 2491.9055 2346.4172 4181.4822 2850.657 118698588 THL Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia ambifaria MC40-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ambifaria; 6372.1206 3083.4095 4460.7142 5892.1273 3718.8371 3629.8013 3522.7478 4846.1029 3759.8456 5323.8282 3690.8758 4648.606 168701843 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Gemmata obscuriglobus UQM 2246 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Gemmata;species:Gemmata obscuriglobus; 2127.8841 2880.5247 2187.0802 2215.1501 2541.0044 2690.0182 2581.9722 2483.1629 3276.9119 1153.6506 2469.3929 3020.3202 156740279 sigma_70 Stress Sigma factors Roseiflexus castenholzii DSM 13941 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus;species:Roseiflexus castenholzii; 7158.2257 5189.9154 5411.0877 5815.4056 5462.6783 4840.0193 4647.5011 3963.423 4680.7756 4919.9321 5580.7587 4232.5021 84043079 Catechol Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 2246.995 2664.3366 2533.2436 2058.4983 2616.4349 2756.4214 2596.8596 2388.9234 2441.186 2846.1382 2214.9243 2157.6674 269219221 hly virulence hemolysin Actinomyces sp. oral taxon 848 str. F0332 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Actinomyces;species:Actinomyces sp. oral taxon 848; 543.6454 1125.1167 728.7069 802.8022 597.26 900.1032 614.2353 736.1895 584.8205 167644597 fnr Stress Oxygen stress Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 10936.4018 9817.9519 11275.1384 12460.0494 6415.6414 12565.9141 9724.4131 9323.3038 11814.3201 11179.8158 10100.664 9813.562 2627154 xylF Organic Remediation Aromatics BTEX and related aromatics Acinetobacter sp. YAA superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter; 1009.3565 542.6799 1033.3002 713.8455 895.2236 1005.0099 1020.4144 712.9033 651.9755 1035.1961 952.1324 85687975 pcc Carbon cycling Carbon fixation Erythrobacter sp. NAP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 781.1418 611.8465 773.268 774.4581 897.4686 718.3153 1396.1561 730.8318 683.8974 660.261 628.9641 537.4979 219666758 rd Organic Remediation Chlorinated solvents Desulfitobacterium hafniense DCB-2 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium;species:Desulfitobacterium hafniense; 525.4715 693.5331 736.6728 410.0721 538.156 400.9902 438.8191 771.0696 539.2538 211906001 mcrA Carbon cycling Methane Methane production uncultured archaeon superkingdom:Archaea; 1060.3321 1424.5412 1351.0962 1139.0314 1860.613 1102.2485 1170.3609 1435.8088 884.0727 1701.3984 1233.2336 158445654 pstS Stress Phosphate limitation Faecalibacterium prausnitzii M21/2 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Faecalibacterium;species:Faecalibacterium prausnitzii; 3821.2334 2241.2371 3752.9756 3859.9214 5578.7106 5035.7522 3240.7981 5019.8839 3365.9136 3259.8551 5881.3911 3528.884 212528430 ABC_antibiotic_transporter Antibiotic resistance transporter Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 1226.4359 1850.3847 1258.9595 1943.3363 2158.3535 2135.9823 1711.8741 2115.028 1325.7654 1440.137 2053.9354 1725.6893 68348048 nmoA Organic Remediation Aromatics Nitoaromatics Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 2137.5889 710.0789 1521.3972 1375.889 990.1428 657.6728 927.7005 1667.9203 887.5208 1043.6164 1959.735 1351.8948 219952183 glnA Stress Nitrogen limitation Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 959.1332 527.1481 754.3812 1260.1038 540.5163 714.7787 787.305 1057.2283 839.804 628.8845 85091600 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Neurospora crassa OR74A superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Sordariaceae;genus:Neurospora;species:Neurospora crassa; 23742.9287 38870.7698 41717.9133 28960.2796 19139.7839 42101.053 29494.4516 41213.9828 42913.703 33347.9651 16328.1776 49118.7706 40744701 tfdA Organic Remediation Aromatics Chlorinated aromatics Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 642.6817 553.3582 672.364 1024.0818 680.9495 736.672 689.7736 500.4781 679.7387 761.8869 637.661 822.9522 151359447 ara Carbon cycling Carbon degradation Hemicellulose Kineococcus radiotolerans SRS30216 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Kineosporiaceae;genus:Kineococcus;species:Kineococcus radiotolerans; 28117.5727 33080.1449 34591.8061 28504.2616 45519.6078 26008.8201 30457.8819 26935.9403 38081.1961 26769.3742 56115.3234 32898.2716 226090964 pstA Stress Phosphate limitation Gemmatimonas aurantiaca T-27 superkingdom:Bacteria;phylum:Gemmatimonadetes;class:Gemmatimonadetes;order:Gemmatimonadales;family:Gemmatimonadaceae;genus:Gemmatimonas;species:Gemmatimonas aurantiaca; 2009.2836 1415.0353 1619.3934 1874.5611 1930.6495 1695.9982 1650.9443 1859.4947 1421.8575 1537.0394 2599.6303 2158.2995 116121957 hrcA Stress Heat shock Leptospira borgpetersenii serovar Hardjo-bovis L550 superkingdom:Bacteria;phylum:Spirochaetes;class:Spirochaetes;order:Spirochaetales;family:Leptospiraceae;genus:Leptospira;species:Leptospira borgpetersenii; 506.2096 442.155 575.9253 478.443 352.3825 540.0068 480.6149 380.1503 154498800 hrcA Stress Heat shock Bacteroides capillosus ATCC 29799 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides capillosus; 1212.1977 651.7324 894.2365 1582.749 997.4348 1275.5467 1251.727 1038.6774 1372.3455 1070.7604 1687.3623 74484323 xylF Organic Remediation Aromatics BTEX and related aromatics Pseudomonas putida superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1363.3916 2723.8741 1286.7009 1285.6497 3226.9698 1592.8447 1759.1315 2477.5025 1846.17 1980.8947 1067.0528 1238.9737 103488062 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Sphingopyxis alaskensis RB2256 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingopyxis;species:Sphingopyxis alaskensis; 587.25 693.8471 385.6071 457.7127 769.508 697.4797 152073796 cap virulence capsule Beggiatoa sp. PS superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Thiotrichales;family:Thiotrichaceae;genus:Beggiatoa; 1029.0752 738.8811 632.5794 881.8951 118028826 phtA Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 3363.9039 2151.3851 1959.7046 3524.5375 939.1037 2481.3977 2046.2542 1581.9074 1813.7743 1931.5836 1823.7317 1638.1181 218241555 catechol_B Organic Remediation Aromatics Other aromatics Alicyclobacillus acidocaldarius LAA1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Alicyclobacillaceae;genus:Alicyclobacillus;species:Alicyclobacillus acidocaldarius; 967.5015 126035057 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 912.2948 568.076 506.1914 452.3863 749.2793 170174611 pstB Stress Phosphate limitation Candidatus Korarchaeum cryptofilum OPF8 superkingdom:Archaea;phylum:Korarchaeota;genus:Candidatus Korarchaeum;species:Candidatus Korarchaeum cryptofilum; 1495.3035 1215.8946 1376.3077 1180.3088 1391.6299 1054.5305 944.9058 1352.2954 919.9864 1086.1661 2094.7772 1252.5481 145245794 BADH Organic Remediation Aromatics Other aromatics Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 2771.4187 3821.4668 3364.7568 2473.4716 4539.4437 2967.4472 3798.4041 2861.9947 3273.1414 2489.2361 4086.0565 3367.474 50876394 acc soil_benifit Desulfotalea psychrophila LSv54 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobulbaceae;genus:Desulfotalea;species:Desulfotalea psychrophila; 5591.4624 2425.7238 2794.0529 5006.733 1771.5032 1903.5765 2554.1559 2383.0408 2973.6123 3845.9039 2522.8717 2312.1018 87331842 arhA Organic Remediation Aromatics Heterocyclic aromatics uncultured bacterium superkingdom:Bacteria; 1665.2691 934.4382 1012.5347 462.8339 730.1029 448.8168 576.4127 909.3845 1460.4076 570.3712 160879809 pstB Stress Phosphate limitation Clostridium phytofermentans ISDg superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium phytofermentans; 926.5383 684.8758 807.6486 673.7745 611.5194 1335.2633 825.1494 73539816 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 812.5197 1481.6406 2791.3486 1036.6835 1375.4574 776.2613 1385.2823 3151.3595 1128.8402 2005.539 1180.0885 2565.8893 259041581 ABC_antibiotic_transporter Antibiotic resistance transporter Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella pneumoniae; 860.5401 565.3552 721.927 839.0717 415.8865 585.6239 847.7516 692.4361 476.4165 9180.3126 615.7015 158437029 trzN Organic Remediation Herbicides related compound Clostridium bolteae ATCC BAA-613 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium bolteae; 1595.2465 1488.1648 1427.5012 1328.6599 1945.419 1405.3377 1232.6595 1416.6962 1100.9526 1208.0312 2286.878 1806.8063 209499614 mer Metal Resistance Mercury Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 3092.4775 2678.638 3531.6847 3394.7809 3240.0898 3246.9503 4213.1293 2382.7503 3399.5673 2932.2873 2784.884 3264.0282 171851849 TerC Metal Resistance Tellurium Corynebacterium urealyticum DSM 7109 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium urealyticum; 1757.8713 1735.1538 2308.4777 1379.3134 907.2327 2036.0443 1439.9953 2034.1956 2068.7929 1462.4252 24587.7378 1636.7037 170027537 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 2389.7266 1438.7364 2628.3755 2839.086 1586.6976 1072.9366 1761.9584 1495.2342 1335.9205 1142.9944 1100.4692 163794539 mer Metal Resistance Mercury alpha proteobacterium BAL199 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 2883.0143 3046.4137 2565.2596 4039.5508 1959.8851 2280.6843 2345.5927 1959.6333 2700.7942 3050.1492 1926.4609 1904.4021 116250432 nitA Organic Remediation Aromatics Other aromatics Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1218.6519 1424.1434 1243.6931 1281.5248 734.7945 1558.4003 1665.0111 1255.6497 984.8361 1202.2746 1378.4837 639.2546 40804944 phn Organic Remediation Herbicides related compound Pseudomonas stutzeri superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 2157.1911 3804.5702 2949.1893 2793.9663 2254.6869 3227.9259 2484.0154 2010.4834 3026.8363 3216.2278 2259.2497 3449.4698 114307475 ArsC Metal Resistance Arsenic Nitrosomonas eutropha C91 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas;species:Nitrosomonas eutropha; 1002.8687 358.5382 664.3673 587.3627 437.9767 403.2598 410.9302 601.5143 448.8952 260906907 acc soil_benifit Brevibacterium linens BL2 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Brevibacteriaceae;genus:Brevibacterium;species:Brevibacterium linens; 2030.0365 2474.3303 2109.3086 1230.2706 2065.4612 2212.2443 2751.7764 1439.1315 1883.0739 2153.6452 1238.3482 1931.5921 257148214 cspA Stress Cold shock Lactobacillus rhamnosus GG superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus rhamnosus; 1178.0662 1309.425 1760.5863 1451.4171 1122.5183 1636.173 1511.6384 1085.6443 1326.5925 1122.4068 1459.3505 1409.4608 21238921 gyrB other category gyrB Microbacterium imperiale superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Microbacterium; 5707.6786 6318.052 6252.5022 5876.8409 13378.0569 6367.7143 9385.7546 4730.2045 6451.146 6048.5866 6037.0225 5004.6858 280957102 cytochrome Energy process Energy process Desulfovibrio aespoeensis Aspo-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio aespoeensis; 1151.3359 1441.8201 1757.8529 1599.1175 3454.9962 1435.2503 1845.0893 1107.7225 1539.0808 1120.7207 1528.7816 1310.6016 56798377 catechol_B Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 1502.7786 1570.469 1384.6243 1162.7829 2707.1942 1432.6927 2402.7489 1037.0941 1433.6812 1426.2906 973.9573 995.5678 77808421 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Shewanella putrefaciens CN-32 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella putrefaciens; 841.2513 1733.9942 2068.1982 870.8064 1152.9294 1342.1773 1766.5871 1792.2312 1282.1285 1725.6743 1127.9071 1814.5101 115386566 ABC_multidrug_fungi Fungi function metal resistance Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 1392.6069 2920.4917 3644.5838 1634.7859 1693.9587 3175.3695 2753.0382 3078.8549 2846.3826 3221.1634 901.1147 3941.4449 113903948 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Salinispora tropica CNB-440 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora tropica; 1957.3275 3302.0548 2955.0487 2361.9738 3027.4207 2268.9287 2062.6107 2693.9632 2383.7568 2425.8888 3112.3153 3142.3047 183600670 gdh Nitrogen Ammonification Providencia stuartii ATCC 25827 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia stuartii; 2435.383 3082.6407 1568.985 1660.5646 2673.5789 2393.2154 1806.2167 1863.017 1702.76 2061.7732 2977.0808 1515.5981 89899942 ZntA Metal Resistance Zinc Rhodoferax ferrireducens T118 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Albidiferax;species:Albidiferax ferrireducens; 800.5381 1425.6626 1856.7359 669.4665 915.082 1404.0066 1273.9236 1601.4921 1905.8126 1235.2103 1739.559 257798620 proV Stress Osmotic stress Desulfohalobium retbaense DSM 5692 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfohalobiaceae;genus:Desulfohalobium;species:Desulfohalobium retbaense; 3219.2381 3505.8337 3358.3158 3630.2687 19330.5527 3476.4396 4988.0656 2638.5498 3207.4336 3050.7634 4881.2949 2655.0947 196228110 exaA Organic Remediation Chlorinated solvents Chthoniobacter flavus Ellin428 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Spartobacteria;genus:Chthoniobacter;species:Chthoniobacter flavus; 6157.1905 7290.2707 6006.814 7548.7608 4849.7923 7204.3691 5742.6842 6052.3299 7168.406 7376.3221 5267.4904 7354.6476 85688776 pcc Carbon cycling Carbon fixation Erythrobacter sp. NAP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 585.0336 819.8816 774.6361 218710796 oxyR Stress Oxygen stress Vibrio splendidus LGP32 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio splendidus; 1903.8938 995.3337 1513.197 1853.508 1135.9795 1340.4124 1675.0776 1959.0644 1498.3561 1697.8475 964.6599 1638.228 260838147 pstC Stress Phosphate limitation Vibrio sp. RC341 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 1294.3362 2560.7694 2461.7966 1954.3355 3009.8452 1908.1083 2681.9572 2365.1749 1988.1589 3188.4568 1574.7167 2970.7739 222112678 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Diaphorobacter sp. TPSY superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax ebreus; 1023.3396 2025.9643 1662.5611 1624.1977 1636.5492 2066.1214 1649.1587 907.3726 16430.357 2009.7488 1628.272 270509530 B_lactamase_C Antibiotic resistance Beta-lactamases Streptosporangium roseum DSM 43021 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptosporangiaceae;genus:Streptosporangium;species:Streptosporangium roseum; 3838.9909 3480.2085 4004.4506 4873.3191 3605.7434 4041.6825 2950.9455 3212.3771 3417.5999 3975.3342 4606.3093 4064.679 56312525 bbs Organic Remediation Aromatics BTEX and related aromatics Azoarcus sp. EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 5393.3763 4821.184 4640.0297 3354.0581 5147.476 3241.2519 3910.0744 6842.2911 4560.4188 3702.2699 7328.6572 4161.8491 94423498 SilA Metal Resistance Silver Sphingomonas sp. SKA58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 2910.6311 1645.9686 1243.9111 2445.2684 2295.6016 1495.7185 3002.0339 1408.1869 1773.7719 1960.4935 1859.5043 2405.88 99079916 ahpC Stress Oxygen stress Silicibacter sp. TM1040 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 742.1656 891.1199 606.2491 526.049 756.7107 587.4669 716.8537 83837996 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Roseovarius nubinhibens ISM superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius;species:Roseovarius nubinhibens; 3303.3914 2575.4488 3486.0743 4995.6654 2818.2402 2841.1114 2534.5533 2408.9681 17801.526 3663.5558 3680.7614 2878.5062 152027473 spe soil_benifit Anaeromyxobacter sp. Fw109-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter; 6551.3747 4390.5111 5196.7756 8253.3249 2845.4281 4860.4795 3743.9855 3592.7902 4696.1988 5664.5947 4958.0775 3638.0836 163857837 pstC Stress Phosphate limitation Bordetella petrii DSM 12804 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella petrii; 489.0593 1544.3595 815.8105 548.8042 1591.1221 642.567 1064.093 605.4678 580.583 686.1895 978.9064 521.5117 153092665 obgE Stress Radiation stress Mannheimia haemolytica PHL213 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Mannheimia;species:Mannheimia haemolytica; 2461.7237 2268.3532 1800.5408 2284.7198 3181.9599 1618.5096 1498.6082 2414.8145 1889.8302 1605.5233 2320.7447 2511.7015 55978112 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 539.2695 487.3275 612.6523 811.8386 649.761 588.9159 655.2043 519.9503 515.4991 846.9634 450.8315 57168491 ppx Phosphorus Phosphorus utilization Campylobacter coli RM2228 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Campylobacteraceae;genus:Campylobacter;species:Campylobacter coli; 2204.4415 1353.1702 1900.5725 2164.1541 1790.1973 1644.6981 1495.3392 1413.6822 1434.0656 1659.3456 2685.6143 2253.6706 51855417 AceA Carbon cycling Carbon degradation Others Symbiobacterium thermophilum IAM 14863 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XVIII. Incertae Sedis;genus:Symbiobacterium;species:Symbiobacterium thermophilum; 5413.7262 2447.7557 3834.1787 4055.1933 3143.0549 3374.9312 3287.8375 3369.43 3311.1053 3337.0153 5532.6019 3767.154 170125298 CysJ Sulphur sulfite reductase Escherichia albertii TW07627 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia;species:Escherichia albertii; 2259.9975 1856.8069 1144.6355 2175.0574 1788.7184 1488.6292 3743.412 1146.7467 1822.9188 1435.6704 1618.8739 1617.7805 158303645 pstC Stress Phosphate limitation Acaryochloris marina MBIC11017 superkingdom:Bacteria;phylum:Cyanobacteria;genus:Acaryochloris;species:Acaryochloris marina; 1136.9634 729.4667 1294.0737 532.0605 951.9827 1178.4053 1242.4188 782.8435 956.6521 577.8965 2385388 mdlB Organic Remediation Aromatics Aromatic carboxylic acid Rhodotorula graminis superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;order:Sporidiobolales;genus:Rhodotorula; 821.0357 535.5072 708.451 826.3854 808.9756 963.5335 865.6492 691.2362 1093.6756 700.6535 772.9115 98978621 pimF Organic Remediation Aromatics Aromatic carboxylic acid Sphingopyxis alaskensis RB2256 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingopyxis;species:Sphingopyxis alaskensis; 828.3832 1232.9527 1767.7252 842.3532 1195.2916 1134.3252 1284.0696 1561.6797 1284.4879 1404.2425 118052942 nagG Organic Remediation Aromatics Aromatic carboxylic acid Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 1907.6772 2001.4986 2153.133 1984.6481 2289.0511 1675.3186 1607.3765 2287.4614 1768.9919 2031.2851 1962.1855 1715.564 222480495 CadA Metal Resistance Cadmium Halorubrum lacusprofundi ATCC 49239 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halorubrum;species:Halorubrum lacusprofundi; 914.4036 1478.5187 1057.8819 1015.3975 1453.8551 1321.8965 1262.4133 1223.1973 1301.8385 1105.3445 886.9162 943.3574 37197241 linC Organic Remediation Pesticides related compound Vibrio vulnificus YJ016 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio vulnificus; 1617.4232 703.9624 1087.3209 1998.236 28446.1298 1356.4605 1344.5286 1216.8547 910.576 1624.7072 810.0712 256829841 AceB Carbon cycling Carbon degradation Others Desulfomicrobium baculatum DSM 4028 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfomicrobiaceae;genus:Desulfomicrobium;species:Desulfomicrobium baculatum; 1646.8668 2390.1721 1049.3147 1785.623 2212.7678 1689.7022 1106.9841 1716.9717 1466.0655 836.3933 311216106 sped_bac soil_benifit Geobacillus sp. Y4.1MC1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 1600.8343 852.4937 1355.3153 627.3219 795.9994 574.0483 823.1837 923.3537 1425.4037 149183928 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 811.7856 727.4343 1059.5796 1111.8042 1040.1799 880.0762 941.9182 762.0734 723.5971 1088.9478 48857 B_lactamase Antibiotic resistance Beta-lactamases Pseudomonas aeruginosa superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 731.0662 787.5281 809.6167 865.1805 864.0995 606.1786 581.7677 570.4834 796.4582 1098.573 686.7136 237800008 type_III_secretion virulence secretion Pseudomonas syringae pv. oryzae str. 1_6 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas coronafaciens; 529.9041 330.0967 477.7963 691.4543 459.1547 458.9215 538.6919 665.8678 218171892 glnA Stress Nitrogen limitation Cyanothece sp. PCC 7424 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 934.6327 2866.7436 2290.914 1617.8147 1615.681 2418.2373 2253.4639 1899.7535 3333.7858 2402.8413 733.5191 2665.6136 90412977 pilin virulence pilin Photobacterium profundum 3TCK superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Photobacterium;species:Photobacterium profundum; 884.866 1259.6101 500.769 932.5138 1604.9144 1076.9167 719.1511 1193.1074 929.2831 916.5793 62003575 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 6099.4853 6422.7321 7816.9509 6622.493 8347.6876 7610.2666 4024.7311 6840.8379 7386.0592 7497.2139 4975.8616 206676743 dsrB Sulphur sulfite reductase Rhodobacterales bacterium HTCC2083 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 695.793 1001.9344 1111.7181 948.4988 1337.709 803.721 1071.3193 1278.1507 790.5318 1338.0087 951.9951 71065794 exaA Organic Remediation Chlorinated solvents Psychrobacter arcticus 273-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Psychrobacter;species:Psychrobacter arcticus; 435.8 1007.35 544.1257 476.3451 626.0807 626.474 1303.7061 995.4832 594.3343 760.5468 116625397 exaA Organic Remediation Chlorinated solvents Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 2177.5903 636.0064 1086.3904 1741.0924 1236.0859 896.435 1095.7394 2805.6567 1153.466 1450.7005 2845.8104 1075.3527 258566800 katE Stress Oxygen stress Uncinocarpus reesii 1704 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Onygenaceae;genus:Uncinocarpus;species:Uncinocarpus reesii; 602.3176 1336.6783 1210.7902 674.0826 984.5308 1345.9463 1410.4079 1382.7921 1432.6985 1085.2784 982.2699 1359.0493 119822199 ArsC Metal Resistance Arsenic Stenotrophomonas maltophilia R551-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 2520.5706 2518.3367 1871.1009 2129.9103 6493.5651 2931.5371 4961.1258 2236.7848 2761.823 2383.233 2172.617 1646.6459 29150151 nosZ Nitrogen Denitrification uncultured soil bacterium superkingdom:Bacteria; 1070.9839 965.1211 938.3057 1263.0899 1520.9947 1266.8752 829.8689 873.3091 1156.9558 1060.7343 679.7375 108799055 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium sp. MCS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 1332.4705 1362.0262 1744.0695 1642.4839 1319.9818 1732.342 1268.9283 1552.8571 1944.9297 1782.8018 1414.7128 1679.9881 115260179 CopA Metal Resistance Copper Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1313.2757 1099.1415 1284.6224 708.0704 801.9066 793.3741 880.8207 1101.2108 258525580 sigma_32 Stress Sigma factors Desulfurivibrio alkaliphilus AHT2 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobulbaceae;genus:Desulfurivibrio;species:Desulfurivibrio alkaliphilus; 1689.192 1886.548 1681.5933 1729.5317 2421.9669 1684.9754 1429.9474 1349.6748 1466.205 1602.2962 3448.2754 1625.8002 146283057 cytochrome Energy process Energy process Pseudomonas stutzeri A1501 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas stutzeri; 14973.8817 12707.7426 14869.212 12291.474 8913.3896 15040.5067 12546.4791 11775.4842 16991.721 14569.1012 9778.5422 11986.967 12746252 pheA Organic Remediation Aromatics Other aromatics Burkholderia cepacia superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 451.9457 916.228 542.9352 652.3172 1086.9632 851.1941 602.2756 763.8906 1108.3371 727.5099 76559262 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Natronomonas pharaonis DSM 2160 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Natronomonas;species:Natronomonas pharaonis; 1083.8789 1409.0463 1909.9359 799.7836 1312.6536 1192.766 1511.7631 1723.4485 1507.3367 1712.5612 14276189 dsrB Sulphur sulfite reductase Desulfosarcina variabilis superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfosarcina; 3312.6732 1871.8686 1382.8069 2789.4188 1943.2007 1687.0693 1597.0113 1312.3089 1595.5199 1805.6819 3855.4684 1603.8559 46133941 pheA Organic Remediation Aromatics Other aromatics Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 466.5332 1096.1835 838.8292 161897976 amoA Nitrogen Nitrification Archaea superkingdom:Archaea;phylum:Crenarchaeota; 6769.6361 2850.8664 3836.9266 5475.2842 2662.3169 3326.0541 3682.0119 4025.9779 5169.1456 4728.6564 3647.4633 4111.3553 71558389 pimF Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas syringae pv. phaseolicola 1448A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas savastanoi; 4187.5321 2333.3148 3714.1407 4404.4391 3109.4966 3601.2946 3454.9817 3148.7691 2997.8538 3027.928 3488.2283 4784.3502 225168092 phoB Stress Phosphate limitation Dethiobacter alkaliphilus AHT 1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Syntrophomonadaceae;genus:Dethiobacter;species:Dethiobacter alkaliphilus; 700.1854 304.0254 538.7606 727.4071 799.7687 500.4337 608.7479 530.3003 504.7347 164660040 tre_fun soil_benifit Malassezia globosa CBS 7966 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Exobasidiomycetes;order:Malasseziales;family:Malasseziaceae;genus:Malassezia;species:Malassezia globosa; 1735.5468 1825.2436 1829.6489 1467.0734 2316.7415 1924.4405 1297.8448 1485.7147 1600.6337 1686.212 2844.1767 1822.4886 150837201 CopA Metal Resistance Copper Marinomonas sp. MWYL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Oceanospirillaceae;genus:Marinomonas; 2862.5703 1172.2259 2089.673 1946.7607 822.3864 1048.0806 1650.6354 1148.9229 1823.0234 906.3281 1462.4677 118435096 phn Organic Remediation Herbicides related compound Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 2286.1098 2283.81 2895.6403 2001.8385 3819.9483 2364.6789 2894.6152 1695.3244 1996.0219 2176.542 3666.5869 2260.2072 163761222 PobA Organic Remediation Aromatics Aromatic carboxylic acid Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 1120.2872 1917.7801 1327.266 1744.2154 1478.3887 2584.0876 1769.8676 1565.143 4400.1527 2248.2195 1052.6379 1565.1719 227465804 srt virulence surface protein Gardnerella vaginalis ATCC 14019 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Gardnerella;species:Gardnerella vaginalis; 881.1721 1700.2264 1529.3794 1120.7315 1607.5032 932.9433 985.0287 1779.9938 1219.0146 1864.2834 1902.4246 118660516 atzC Organic Remediation Herbicides related compound Burkholderia multivorans ATCC 17616 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 8662.3139 9125.3261 15056.8005 5383.7574 6587.9267 9157.0321 9404.9099 12243.0601 11866.3521 10329.5912 3821.5137 10454.9862 77383094 pimF Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas fluorescens PfO-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 705.24 729.9 630.9533 19763.6326 480.2482 812.3661 696.4783 897.9389 598.6003 33284998 chnC Organic Remediation Other Hydrocarbons Acinetobacter sp. NCIMB9871 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter; 2800.3385 2690.9983 2797.9495 2896.7663 3877.3957 3086.6189 2364.2892 2509.6272 2189.4875 2543.371 5189.8909 2620.8736 119696264 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium sp. KMS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 763.841 1568.6978 1553.544 863.7659 934.3828 1657.2763 1358.2011 1401.8684 2005.5508 1504.5451 643.1145 1810.7337 116226827 exaA Organic Remediation Chlorinated solvents Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 3849.8979 1859.2153 2872.3626 3655.6228 2956.0002 3015.3073 2765.5407 3354.8928 2623.5385 3059.462 2629.637 2879.852 227217591 MATE_antibiotic Antibiotic resistance transporter Anaerococcus tetradius ATCC 35098 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XI. Incertae Sedis;genus:Anaerococcus;species:Anaerococcus tetradius; 924.0346 1105.2335 1078.2007 785.7766 712.2581 820.0639 866.1454 807.5509 1004.9693 843.3419 218221000 ppx Phosphorus Phosphorus utilization Mitsuokella multacida DSM 20544 superkingdom:Bacteria;phylum:Firmicutes;class:Negativicutes;order:Selenomonadales;family:Veillonellaceae;genus:Mitsuokella;species:Mitsuokella multacida; 1177.999 1021.6344 908.6244 1294.8281 2036.6649 885.0163 603.7029 878.0738 119224836 chitin_synthase Fungi function major biomolecule Pleurotus ostreatus superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Pleurotaceae;genus:Pleurotus; 1588.1408 3440.1076 2762.7349 1743.2429 5409.9518 2792.2193 2234.2971 2842.4584 2538.9323 3760.3466 1007.5919 2811.0255 58267810 tfdA Organic Remediation Aromatics Chlorinated aromatics Cryptococcus neoformans var. neoformans JEC21 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Tremellomycetes;order:Tremellales;family:Tremellaceae;genus:Filobasidiella;species:Cryptococcus neoformans; 588.6201 381.3729 548.373 281.9504 480.857 339.8101 432.9344 569.4649 220910789 gyrB other category gyrB Arthrobacter chlorophenolicus A6 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter chlorophenolicus; 5958.0566 5569.0446 8097.4757 7055.2937 3962.1638 7602.5204 8431.317 9100.1615 6411.6561 6096.2115 5891.1211 5799.3905 211956956 pimF Organic Remediation Aromatics Aromatic carboxylic acid Pseudovibrio sp. JE062 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pseudovibrio; 1929.0525 1044.7111 1247.8719 1023.0376 770.862 409.4538 657.6493 851.8052 559.8858 1834.0623 784.2682 37498962 endoglucanase Carbon cycling Carbon degradation Cellulose Bacillus pumilus superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 1357.253 1480.9653 1268.2648 981.2496 1174.638 1497.4983 708.8734 1312.2121 1083.188 866.1592 1624.1353 1064.5006 28854628 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 1489.1314 1968.0494 1453.0762 1318.9416 2425.209 1740.6577 1078.3047 1629.0535 1646.9965 1371.4634 1808.0676 2000.2127 169276 lip Carbon cycling Carbon degradation Lignin Phanerochaete chrysosporium superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Corticiales;family:Corticiaceae;genus:Phanerochaete; 1560.9807 2321.9484 2406.5999 1803.6536 1443.5316 1782.3607 1826.4311 2367.5311 1983.7323 1944.6707 1661.926 2419.1546 254515221 AceB Carbon cycling Carbon degradation Others gamma proteobacterium NOR5-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 3874.2192 2911.1769 2951.5228 3712.9059 3519.7842 3140.4017 2797.9499 3057.5501 2775.7843 3138.4423 4575.8216 2985.5399 309306648 AceB_fungi Fungi function carbon degradation Puccinia graminis f. sp. tritici CRL 75-36-700-3 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;order:Pucciniales;family:Pucciniaceae;genus:Puccinia;species:Puccinia graminis; 760.0397 538.1936 675.2332 526.9399 635.7325 921.5117 855.2095 27803361 lipase_fungi Fungi function carbon degradation Candida deformans superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;genus:Candida; 1050.3251 1652.1997 1005.0565 1409.0644 2416.4307 1214.66 1958.6561 793.6287 1095.8387 1005.5946 1273.328 793.7984 239910437 ahpF Stress Oxygen stress Thermococcus gammatolerans EJ3 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Thermococcus;species:Thermococcus gammatolerans; 2339.7047 1634.0543 2216.2392 2389.0264 1164.1913 1785.6312 2762.1455 2617.7305 1572.3152 2474.8537 1566.6684 1538.792 86164313 aoxB Metal Resistance Arsenic Marinomonas sp. MED121 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Oceanospirillaceae;genus:Marinomonas; 862.9042 1065.9147 840.5422 1155.2356 895.3432 1243.1892 459.9528 1042.3585 765.1251 884.706 774.9164 76558649 ZntA Metal Resistance Zinc Natronomonas pharaonis DSM 2160 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Natronomonas;species:Natronomonas pharaonis; 1261.3196 1616.699 1270.4602 1426.5972 1815.8495 1624.0734 1059.677 1776.4593 1093.7536 1363.859 2210.2635 1512.9203 170027517 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 498.4486 688.2254 922.5885 721.8459 773.3974 964.3515 874.2608 639.0486 701.1145 867.5438 644.9947 302886434 sid_fun soil_benifit Nectria haematococca mpVI 77-13-4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Nectria;species:Nectria haematococca; 465.2572 578.1999 663.7722 411.8333 462.1948 529.446 95110579 iro virulence Iron oxidation Pseudomonas entomophila L48 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas entomophila; 567.1283 766.8979 655.3845 596.4973 521.587 441.0942 554.9949 90413673 AceB Carbon cycling Carbon degradation Others Photobacterium profundum 3TCK superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Photobacterium;species:Photobacterium profundum; 2298.4004 1912.6321 2434.317 2525.0154 3119.6399 2459.0082 1511.8104 1777.7424 1638.0152 2252.3399 4451.8311 2502.4871 251782730 pstB Stress Phosphate limitation Streptococcus dysgalactiae subsp. equisimilis GGS_124 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus;species:Streptococcus dysgalactiae; 865.4429 1011.6442 981.9532 1012.4662 1007.1874 970.5434 632.6633 775.436 794.4458 923.1304 1537.2383 919.3121 157804798 APS_AprA Sulphur adenylylsulfate reductase sulfur-oxidizing bacterium str. manganese crust superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 644.2264 611.3623 701.3993 930.9112 687.7939 586.8698 845.2067 463.4267 813.4103 771.1997 963.0022 659.8234 29652464 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 7427.4828 8345.779 7675.6416 7343.8458 8840.0352 7908.6457 6899.5713 9900.3871 7215.3628 7633.5971 7714.084 7826.0105 148260519 glycosyl_transferase_EPS Bioleaching EPS Acidiphilium cryptum JF-5 3651.0193 1772.2601 2720.2796 3199.3035 1623.8814 2455.3289 1745.4475 2234.5455 2449.2005 2526.3199 3010.2588 3340.023 89901337 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Rhodoferax ferrireducens T118 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Albidiferax;species:Albidiferax ferrireducens; 2343.8284 915.4235 1638.3473 796.9437 700.223 591.3583 751.6472 1800.1155 66046097 silC Metal Resistance Silver Pseudomonas syringae pv. syringae B728a superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae; 984.0692 1693.1415 1405.5757 889.8597 1879.0985 1342.1623 1306.7457 1697.3199 1552.2817 1000.0962 1422.8086 133738798 AceB Carbon cycling Carbon degradation Others Herminiimonas arsenicoxydans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Herminiimonas; 8503.6785 11282.0886 8948.908 8213.6249 14402.8956 8168.2271 13136.1176 6599.2857 8858.9229 8549.3576 11259.8512 6496.6093 13249563 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1691.2471 590.936 543.1243 1093.3638 679.793 949.2606 1559.7101 960.3772 860.3555 744.4672 890.5679 1224.9118 50842708 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Propionibacterium acnes KPA171202 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Propionibacteriaceae;genus:Propionibacterium;species:Propionibacterium acnes; 1791.2103 2209.6738 1911.7533 1493.4959 1804.9984 1905.0273 1617.9215 1738.7182 1464.0383 1950.3656 2137.2527 1851.6287 269137313 endochitinase Carbon cycling Carbon degradation Chitin Beauveria bassiana superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Cordycipitaceae;genus:Cordyceps;species:Cordyceps bassiana; 779.4135 1197.2268 1475.9516 1054.1123 541.1783 759.7305 1972.4477 1030.7445 837.0594 1168.2246 209869110 dsrA Sulphur sulfite reductase uncultured marine bacterium superkingdom:Bacteria; 708.7014 591.5731 608.4048 690.6066 571.0568 654.5748 647.6459 658.2845 693.3463 227295600 nplT Carbon cycling Carbon degradation Starch Thermoactinomyces vulgaris superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Thermoactinomycetaceae;genus:Thermoactinomyces; 938.5146 1204.044 1284.1128 1351.1512 1301.6669 1377.6237 1441.4234 1245.0334 1273.1356 904.0023 1564.8185 1747.7984 139002684 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 746.3253 688.1872 1099.4759 844.9127 938.5071 713.5055 1094.3231 864.3977 2452.1518 1200.0562 257066865 pstA Stress Phosphate limitation Anaerococcus prevotii DSM 20548 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XI. Incertae Sedis;genus:Anaerococcus;species:Anaerococcus prevotii; 2630.2587 2222.5183 2292.7606 3073.4369 1170.2015 1786.0051 1768.5944 1335.2102 1802.6147 2111.8436 1577.984 1790.1764 83837012 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Roseovarius nubinhibens ISM superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius;species:Roseovarius nubinhibens; 524.2656 1208.6314 535.5346 1115.2378 1189.0153 542.804 561.6836 700.4161 91795546 proO Organic Remediation Aromatics Other aromatics Chromohalobacter salexigens DSM 3043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Halomonadaceae;genus:Chromohalobacter;species:Chromohalobacter salexigens; 3410.42 1687.4201 2598.0171 2918.6275 1793.5341 1967.2903 1492.334 1867.3624 2064.6458 2269.5027 3227.5854 2652.5542 212527864 cellobiase_fungi Fungi function carbon degradation Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 6932.5027 10203.2061 7445.5252 8673.3138 9238.5836 10590.353 7773.8206 7775.9057 9636.7224 9491.1583 7085.5763 12239.3127 270284101 srt virulence surface protein Bifidobacterium gallicum DSM 20093 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium gallicum; 1167.8308 2028.0541 1853.2465 1501.3994 1766.0428 1305.5194 1160.6035 2078.933 1416.8834 1144.1981 1921.728 1872.1173 254434698 sigma_70 Stress Sigma factors Nitrosococcus oceani AFC27 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Chromatiaceae;genus:Nitrosococcus;species:Nitrosococcus oceani; 1158.764 591.8025 852.5664 1088.7067 724.3288 1098.6141 893.634 879.6659 926.4166 789.0437 836.4725 888.7027 194016386 TerD Metal Resistance Tellurium Bacillus pumilus ATCC 7061 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus pumilus; 719.098 697.1597 503.4023 746.1179 475.6818 571.119 391.2835 1032.5293 77544350 phoB Stress Phosphate limitation Pelobacter carbinolicus DSM 2380 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter carbinolicus; 3577.6252 3446.7083 4016.9109 3454.2144 4184.3505 3649.768 2767.0777 3322.6712 3314.3437 3413.4161 4930.1129 4053.4185 37925159 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 754.8548 1654.8629 668.2611 1708.1973 920.739 863.6393 729.577 909.2694 992.474 955.5785 779.297 551309 mauAB Organic Remediation Herbicides related compound superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 1070.6274 796.4479 704.3095 1151.7427 896.0013 1202.9975 950.8564 812.956 978.0358 762.9805 256361016 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 2012.2119 571.6693 846.6052 1751.4888 1494.5044 1173.8891 1020.1162 1547.9428 1288.0695 1290.6741 1995.1472 1119.31 114195769 CadA Metal Resistance Cadmium Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 654.6767 903.5619 802.6549 384.6122 1072.2312 516.3451 1150.2085 826.3289 29160341 exoglucanase Carbon cycling Carbon degradation Cellulose Trichophaea saccata superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Pezizomycetes;order:Pezizales;family:Pyronemataceae;genus:Trichophaea; 2549.5575 5015.4058 1692.2071 2086.133 1236.6547 1684.5417 1305.0825 1632.7816 1396.125 1774.4493 1821.5214 1606.0256 158508938 gyrB other category gyrB Candidatus Desulfococcus oleovorans Hxd3 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfococcus;species:Desulfococcus oleovorans; 1075.4703 872.521 612.6067 1137.4562 2841.257 722.7125 2086.5032 884.6408 946.4295 750.8877 839.1072 1124.1575 121553501 pcc Carbon cycling Carbon fixation Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 3429.964 6835.8839 4961.265 3908.8079 6390.9371 4841.3803 5071.7906 3525.8535 5062.453 3939.9924 4677.0377 3546.2966 238716451 SMR_antibiotics Antibiotic resistance transporter Yersinia bercovieri ATCC 43970 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia bercovieri; 7998.7987 8019.5909 10885.9164 8952.6201 9084.9165 9482.0023 8052.1342 9961.9252 8501.7199 10656.8686 8687.705 10364.5038 157371978 MFS_antibiotic Antibiotic resistance transporter Serratia proteamaculans 568 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Serratia;species:Serratia proteamaculans; 1430.3919 4100.4141 2524.6944 1289.7042 3874.419 2856.5463 2107.5626 2327.0101 3308.9619 2904.3377 1790.7219 1639.5463 85818514 alkB Organic Remediation Other Hydrocarbons Cellulophaga sp. MED134 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Dokdonia;species:Dokdonia donghaensis; 496.9576 551.3391 474.2136 626.1903 653.2066 194011776 phzF soil_benifit Bacillus pumilus ATCC 7061 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus pumilus; 3928.6514 2139.9465 2471.3491 3173.9494 1601.7964 2407.7829 3272.2265 3916.2526 2067.3367 2946.1449 1428.0945 1870.7853 134053514 CadA Metal Resistance Cadmium Desulfotomaculum reducens MI-1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfotomaculum;species:Desulfotomaculum reducens; 601.0182 673.2363 616.3103 536.0743 583.7887 559.862 483.4192 513.6455 592.4527 89335033 PceA Organic Remediation Others Desulfitobacterium hafniense Y51 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium;species:Desulfitobacterium hafniense; 1353.3442 1210.8486 1288.7509 1338.7002 1514.9996 1158.7234 1011.2038 921.704 940.3487 1180.3942 2066.6925 1206.5241 2072731 Quinoline Organic Remediation Aromatics Polycyclic aromatics Pseudomonas putida superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 9482.3288 3265.7513 5865.3303 8736.2951 5094.4651 4454.7303 4587.9534 4308.649 4730.5981 5368.159 6214.1078 5412.2344 114227201 dsrB Sulphur sulfite reductase Alkalilimnicola ehrlichei MLHE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Alkalilimnicola;species:Alkalilimnicola ehrlichii; 1782.7166 1847.594 1560.3267 2295.8558 1608.1573 1971.3434 2441.0594 2220.1112 1920.4612 2213.5979 2375.0082 2032.5845 12862420 Catechol Organic Remediation Aromatics Other aromatics Pseudomonas sp. CA10 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 590.1245 621.1629 652.4761 591.5511 732.007 819.3382 590.5428 605.6459 583.2678 161395047 nagG Organic Remediation Aromatics Aromatic carboxylic acid Roseobacter litoralis Och 149 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter litoralis; 5295.1593 7629.7579 5100.975 3996.3762 8572.9522 6958.5475 7678.0213 5623.7419 6369.0559 6378.9236 5316.0441 6438.1644 119474431 sid_fun soil_benifit Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 2144.1036 811.79 2082.5971 2201.5621 1179.6054 1265.5562 1363.4889 945.3558 1490.0853 1748.8335 2177.4459 1048.6571 167076159 PobA Organic Remediation Aromatics Aromatic carboxylic acid Rhizobium leguminosarum bv. trifolii WSM1325 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 679.8824 735.7551 562.7599 720.9761 1007.6424 750.155 633.5466 400.6393 710.5502 744.6123 911.2371 623.0504 86355824 phn Organic Remediation Herbicides related compound Rhizobium etli CFN 42 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 6529.4934 4509.9216 5788.4455 6696.446 5097.6314 7679.2611 5838.5753 5975.5041 5282.7344 5769.269 5543.1968 5766.1582 225194134 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1303.8462 813.5612 970.5518 922.2471 606.1739 794.1371 906.3804 600.487 1243.994 673.5717 118504069 obgE Stress Radiation stress Pelobacter propionicus DSM 2379 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter propionicus; 738.5388 564.1454 808.4621 838.6028 619.7937 150036142 sox Sulphur Sulphur oxidation endosymbiont of Ifremeria nautilei superkingdom:Bacteria; 1011.8339 737.6156 984.803 781.9506 639.4561 823.872 575.9916 609.688 118658467 silC Metal Resistance Silver Burkholderia multivorans ATCC 17616 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 8405.8645 10251.5896 11052.1609 14075.604 12826.3723 10823.5814 8777.1788 13394.6243 9810.4546 8141.4919 12664.2574 12715.221 192764388 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3783.6806 2216.9617 4614.2511 4821.864 4689.8876 3566.2185 5214.9412 5870.2696 2954.6508 3132.0432 5074.8852 5697.6201 83816541 nosZ Nitrogen Denitrification Salinibacter ruber DSM 13855 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Rhodothermaceae;genus:Salinibacter;species:Salinibacter ruber; 1965.3734 1229.7968 2357.0978 2118.5003 1316.8787 960.2984 997.7033 1194.3044 1055.1374 1253.6238 2409.98 1157.1701 218169827 ahpC Stress Oxygen stress Cyanothece sp. PCC 7424 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 636.664 744.9298 531.5944 811.3544 722.8523 366.36 704.2903 197714255 ureC Nitrogen Ammonification Streptomyces sviceus ATCC 29083 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces sviceus; 1219.5854 1780.3516 2380.5064 1457.1564 3383.9169 1326.7274 2187.1889 1123.2644 1488.3147 1587.0986 1522.8716 1366.5472 89045424 hly virulence hemolysin Oceanicola granulosus HTCC2516 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola granulosus; 3436.5458 2479.4719 3262.7478 3695.4415 3388.1638 3188.2319 2450.1209 3224.2151 2763.3024 3125.1431 4672.2568 3711.1123 42782712 ureC Nitrogen Ammonification Bacillus cereus ATCC 10987 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus cereus; 951.6648 700.7832 771.247 924.4185 1026.2494 715.5185 597.3465 648.3411 636.5018 656.3416 1633.9131 1043.4799 119451442 gyrB other category gyrB marine gamma proteobacterium HTCC2143 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 1068.4049 1366.8174 705.7466 1916.0646 1619.751 1080.8281 907.7841 1304.4712 1249.883 762.4312 218130145 catB Organic Remediation Aromatics BTEX and related aromatics Bacteroides eggerthii DSM 20697 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides eggerthii; 5370.9041 9434.4605 7076.8184 6575.7297 9254.4527 8371.7522 6669.708 4743.5797 8159.4858 8978.1716 10330.0029 9737.7731 89091895 mer Metal Resistance Mercury Oceanospirillum sp. MED92 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Oceanospirillaceae;genus:Neptuniibacter; 742.9269 982.005 651.1218 740.3786 667.8884 603.9427 481.321 558.9143 1088.8911 480.8503 66048091 glnA Stress Nitrogen limitation Pseudomonas syringae pv. syringae B728a superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae; 2143.2977 1432.7602 2179.0763 1993.8391 1341.0459 1626.4365 2385.6238 1604.7966 1671.2147 1717.0091 1478.7624 1579.3162 257051220 gyrB other category gyrB Halorhabdus utahensis DSM 12940 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halorhabdus;species:Halorhabdus utahensis; 1603.4939 987.4971 646.5418 1267.2265 1013.1028 782.857 1337.6465 641.5991 678.271 1063.18 1902.1363 78167250 hrcA Stress Heat shock Chlorobium luteolum DSM 273 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Pelodictyon;species:Pelodictyon luteolum; 1118.8432 752.6773 875.7132 1080.9676 14695.7631 1063.9754 1118.6798 1152.3388 665.131 962.7601 860.4171 718.1744 149121623 endoglucanase Carbon cycling Carbon degradation Cellulose Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 1317.8964 1752.8659 1039.2824 1867.8767 1766.0428 1689.9259 1603.3772 808.166 1580.0151 1831.8226 977.3449 1504.3376 145576104 phn Organic Remediation Herbicides related compound Pseudomonas mendocina ymp superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas mendocina; 1289.7155 1340.3894 964.4041 1742.4895 1042.6986 1042.7225 1098.6299 683.0804 1151.2178 1398.1623 1067.1489 821.7163 238602074 cellobiase_fungi Fungi function carbon degradation Moniliophthora perniciosa FA553 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Marasmiaceae;genus:Moniliophthora;species:Moniliophthora perniciosa; 2175.8038 5369.2923 2861.996 3808.3091 3251.9775 6277.7672 4673.0931 6818.833 2265.788 2211.5935 5238.6609 4987.2182 45386151 narG Nitrogen Denitrification unidentified bacterium superkingdom:Bacteria; 914.7044 856.8438 841.3842 741.4375 569.7681 1192.4897 62003515 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3896.7632 5102.9219 5325.1738 4602.341 4154.5145 7110.5633 4028.4242 5696.8517 6585.8892 5732.6765 3453.7049 6327.3581 110835044 mer Metal Resistance Mercury Alcanivorax borkumensis SK2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax;species:Alcanivorax borkumensis; 2284.9815 640.8884 1560.2613 2248.9418 1376.7846 741.991 1125.5849 1628.1336 729.5379 1058.5236 2181.6022 1411.246 260425307 fnr Stress Oxygen stress Citreicella sp. SE45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Citreicella; 2085.9552 3116.6634 2574.783 2237.4085 2781.9895 1941.027 1798.8299 3524.8731 2116.7748 2209.9744 3696.2093 2303.4504 149749955 ChrA Metal Resistance Chromium Vibrio parahaemolyticus AQ3810 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio parahaemolyticus; 640.3042 373.0265 437.2474 826.0155 523.2868 477.2303 525.628 557.0754 598.8232 697.0017 372.9831 84391955 pimF Organic Remediation Aromatics Aromatic carboxylic acid Oceanicola batsensis HTCC2597 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola batsensis; 1357.1456 1681.584 1953.1909 1248.7486 2542.4358 1932.0533 1691.7324 2229.256 1535.0502 2231.4474 1290.6017 2006.1588 148547945 nhh Organic Remediation Aromatics Nitoaromatics Pseudomonas putida F1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 2162.0223 2471.1765 1828.3985 2948.8032 2092.1468 2773.4791 2614.2369 2496.5546 2050.0963 2056.1454 1705.0742 2467.9639 126638782 AceB Carbon cycling Carbon degradation Others Shewanella loihica PV-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella loihica; 662.5346 1249.93 859.051 1722.6824 832.9306 1492.5978 1059.0996 963.6466 1466.903 1028.6765 83309358 PobA Organic Remediation Aromatics Aromatic carboxylic acid Magnetospirillum magneticum AMB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magneticum; 3638.8765 4170.1541 3022.4537 2836.2232 5195.1024 3362.2932 3487.3048 3605.1244 3925.7964 3511.9601 2321.5935 3468.1321 110679310 pcc Carbon cycling Carbon fixation Roseobacter denitrificans OCh 114 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter denitrificans; 2073.3825 1769.8135 1777.7429 2078.572 2035.7801 1807.5123 1305.8739 1549.589 1421.1702 1649.6754 3724.7024 2338.8661 29832745 pimF Organic Remediation Aromatics Aromatic carboxylic acid Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 1797.2951 886.4868 1330.6392 1582.0504 1286.6447 951.863 851.6644 1310.8443 988.0045 1053.3647 1722.0596 1416.121 88180854 tfdA Organic Remediation Aromatics Chlorinated aromatics Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 2125.6745 1751.0353 2239.2116 2223.2042 2180.8775 1939.9352 1468.5562 2328.0753 1688.49 1991.1343 2186.7434 2001.8331 195541927 fnr Stress Oxygen stress uncultured bacterium 1062 superkingdom:Bacteria; 905.9279 1421.6996 1201.0924 653.8377 1611.2572 1038.8189 809.7178 1470.8386 1043.1157 1009.1009 1088.014 126179822 pstB Stress Phosphate limitation Methanoculleus marisnigri JR1 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanomicrobiales;family:Methanomicrobiaceae;genus:Methanoculleus;species:Methanoculleus marisnigri; 2271.5089 1332.0812 2295.1741 2434.6529 2355.1667 3298.4131 2821.6512 1607.8794 2739.4427 1072.589 46205560 ara Carbon cycling Carbon degradation Hemicellulose Magnetospirillum magnetotacticum MS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magnetotacticum; 5307.9603 4957.0834 3744.2956 4927.9996 6439.4167 5089.4004 4691.0784 5183.0132 7388.8854 5041.9981 4882.9286 5386.1292 34017082 pmoA Carbon cycling Methane Methane oxidation uncultured bacterium superkingdom:Bacteria; 622.2109 707.2373 614.5861 533.4356 708.2701 826.0059 702.5629 570.0144 847.9261 902.7516 1144.8925 724.2578 186475315 MFS_antibiotic Antibiotic resistance transporter Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 1782.9628 1471.2809 1163.2461 1508.796 1679.7011 1264.9729 882.7946 1120.0083 969.0983 857.7844 2726.1679 898.4595 77951694 nasA Nitrogen Assimilatory N reduction Marinobacter aquaeolei VT8 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter hydrocarbonoclasticus; 2811.3395 2713.0174 3462.3022 1206.7108 1704.3295 1517.3752 1913.9566 5835.4819 2401.9524 2480.9916 3744.4266 2311.2641 194364165 Arylest Organic Remediation Aromatics Other aromatics Stenotrophomonas maltophilia R551-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 1995.0051 1045.6159 1457.5689 2075.1613 932.1266 1808.978 1497.6791 2042.366 1958.4541 1445.2624 1603.6423 1660.5431 51832295 B_lactamase_A Antibiotic resistance Beta-lactamases Pseudomonas luteola superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1665.6318 1257.2697 1484.2488 1916.3796 718.1291 1782.4156 1150.2746 1303.3699 1254.6662 1621.1061 834.6146 1542.2045 238797736 cydB Stress Oxygen limitation Yersinia mollaretii ATCC 43969 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia mollaretii; 616.5827 489.9907 799.221 483.8917 527.4534 560.457 473.7892 1105.4106 440.4579 825.4798 735.8067 116326465 Host_recognition_T4_type Bacteria phage HOST RECOGNITION/STRUCTURAL Enterobacteria phage RB32 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 1139.8513 611.058 667.8713 1232.3389 1124.983 809.21 1620.2385 841.2469 830.0916 750.6422 718.4958 947.3947 186464509 SMR_antibiotics Antibiotic resistance transporter Nostoc punctiforme PCC 73102 superkingdom:Bacteria;phylum:Cyanobacteria;order:Nostocales;family:Nostocaceae;genus:Nostoc;species:Nostoc punctiforme; 588.4689 560.5846 619.6486 774.5861 584.454 350.5296 577.7639 706.4008 580.1211 68518304 Arylest Organic Remediation Aromatics Other aromatics Shewanella baltica OS155 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella baltica; 6120.5471 5951.5379 4936.0536 3342.1413 11834.6559 3971.6572 7915.6959 3055.4089 5744.9875 4779.9886 6690.2755 3724.2816 118569315 pulA Carbon cycling Carbon degradation Starch Mycobacterium ulcerans Agy99 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium ulcerans; 1182.5257 1055.9756 1503.7608 1505.2758 1540.595 1238.7246 1254.9805 726.4379 1296.1655 1459.1311 1539.5687 1384.976 156030885 sulfate_transporter Fungi function Sulfur Sclerotinia sclerotiorum 1980 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Sclerotinia;species:Sclerotinia sclerotiorum; 981.3233 1051.5539 1356.3305 1377.8751 1407.6886 947.092 1394.7338 1313.6525 832.7126 889.8544 1865.102 1324.9245 115255811 TerC Metal Resistance Tellurium Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 3065.6532 922.9857 2788.9641 2797.3907 1104.9997 2250.5474 2697.6828 3001.7022 1383.2646 3580.5556 3292.1395 2427.9067 42736796 srt virulence surface protein Bacillus cereus ATCC 10987 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus cereus; 435.5447 772.1988 553.0257 616.0511 477.8267 634.2276 541.128 731.5476 477.4172 218461295 nmoA Organic Remediation Aromatics Nitoaromatics Rhizobium etli Kim 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 730.3812 1133.8453 871.8748 799.4149 1026.5641 1020.3479 1094.6956 866.0534 1425.5852 1328.1375 1007.3502 46139665 Catechol Organic Remediation Aromatics Other aromatics Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 1679.3595 1503.15 1643.9506 2764.955 2115.979 1219.1618 1770.877 1318.2521 1627.7292 2082.3977 2727.4171 1555.7927 206679394 dehH Organic Remediation Chlorinated solvents Rhodobacterales bacterium HTCC2083 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 735.284 1145.188 424.3213 627.5216 475.1578 661.3045 1178.3146 532.2399 538.8817 677.1421 217401441 TerC Metal Resistance Tellurium Bifidobacterium angulatum DSM 20098 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium angulatum; 955.6005 599.3206 761.0059 645.2539 672.2471 564.2978 887.4871 970.666 936.3402 189467985 sigma_24 Stress Sigma factors Bacteroides intestinalis DSM 17393 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides intestinalis; 1006.482 690.8249 546.7882 666.0284 849.1961 563.819 469.6095 540.2644 491.0668 1047.857 647.3566 237728717 igaA soil_borne_pathogen regulation Citrobacter sp. 30_2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter; 1282.059 1134.9029 1716.4154 928.5826 1260.5608 1379.3408 1297.9775 1447.1707 1230.4646 1313.9798 139003446 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 1916.4664 2961.5482 2709.9711 1845.4949 3816.782 1752.7872 2753.2523 1718.9762 1898.8349 1647.6915 2485.7777 2639.0003 91697715 sox Sulphur Sulphur oxidation Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 1933.2434 2439.044 1777.4957 2594.9002 988.9863 2901.7591 1892.9775 1611.8049 2201.0432 2096.9587 1272.5592 1532.4889 145238310 tftH Organic Remediation Aromatics Chlorinated aromatics Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 9993.965 9832.5634 10284.9413 12196.9336 7087.4726 13036.2894 12496.4919 11198.3646 11058.4751 10690.9486 10029.4071 9870.5238 119225916 Catechol Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 1553.7944 3279.8318 2758.7656 2634.5408 2098.4983 3424.1972 2277.8496 2650.2789 3305.8866 3661.5123 1520.4451 3513.7235 134103521 pstC Stress Phosphate limitation Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 1494.7326 539.8001 952.4235 1365.3008 769.187 583.8593 874.6507 1265.622 1193.3473 1531.2081 768.748 51243151 catB Organic Remediation Aromatics BTEX and related aromatics Sphingomonas sp. tfd44 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 1210.6664 3286.0629 3451.9937 1489.688 4245.0211 2105.8154 2340.4885 2877.1372 2526.9222 2610.9504 1621.6848 2408.7363 218751066 CODH Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 1202.701 725.1788 1155.5256 738.9267 1073.8166 779.4593 1983.2366 962.3419 844.4516 998.4379 39934877 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1690.3472 1768.5839 1995.2585 1619.9925 1044.4808 1777.0613 1696.4524 1982.2683 1789.6844 1912.3159 967.0383 1757.2257 56553604 phospholipase_C_fungi Fungi function carbon degradation Cryphonectria parasitica superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Diaporthales;family:Cryphonectriaceae;genus:Cryphonectria; 9585.2605 3684.1785 5611.1074 6779.316 4362.3995 4588.4695 4870.0407 4965.1726 4835.8579 5604.8654 8116.7363 4593.6491 256831975 exoglucanase Carbon cycling Carbon degradation Cellulose Jonesia denitrificans DSM 20603 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Jonesiaceae;genus:Jonesia;species:Jonesia denitrificans; 1058.8741 927.4287 1351.2126 786.3189 737.2145 1267.511 662.8245 55772604 pilin virulence pilin Thermus thermophilus HB8 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Thermus;species:Thermus thermophilus; 4000.3128 4745.6461 4023.4828 3370.3171 5692.0887 3928.8972 5959.7468 4241.555 3189.3856 2700.215 5787.2147 4060.1886 167541478 mcrA Carbon cycling Methane Methane production uncultured bacterium superkingdom:Bacteria; 790.9608 1646.2999 1242.4717 987.7833 1545.7141 668.8452 969.8995 1512.332 1248.8359 1632.2446 1679.3152 158329924 pcpE Organic Remediation Herbicides related compound Azorhizobium caulinodans ORS 571 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Azorhizobium;species:Azorhizobium caulinodans; 3414.5974 2161.5451 2998.4636 1819.771 2395.4046 2237.8346 2093.4886 4431.2773 2340.7489 2526.0854 3205.8191 2584.3044 148510974 iro virulence Iron oxidation Pseudomonas putida F1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1810.7543 645.3085 532.1033 1439.1715 1054.0364 618.0686 861.3797 1203.9394 918.5536 924.2135 1862.147 1003.9995 10640538 cytochrome_b Bioleaching Electron transport Thermoplasma acidophilum;Thermoplasma acidophilum DSM 1728 755.3652 648.698 523.8594 624.0044 1092.9224 948.6474 434.6539 648.381 782.7386 556.3683 826.756 290956237 cat_bac soil_benifit Streptomyces scabiei 87.22 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces scabiei; 1760.1145 1746.5583 2278.0902 1225.2573 1656.1154 1615.0547 1434.2487 2874.2927 2194.4499 1695.3127 1652.7486 2384.1554 16331540 pstB Stress Phosphate limitation Synechocystis sp. PCC 6803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechocystis; 1264.8926 1133.291 720.3152 928.2265 1295.8211 1059.122 1042.9075 1098.608 1139.2194 1155.3088 1519.2198 895.8023 76803680 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 5293.8698 4969.673 5855.5888 9694.0123 8299.8211 3897.8479 3306.0178 6040.843 10682.4707 3529.5025 9638.8151 11754.19 108802257 tfdB Organic Remediation Aromatics Chlorinated aromatics Mycobacterium sp. MCS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 1478.0228 2335.4046 1785.3325 2004.4273 2333.7482 2052.2121 1750.9417 1742.2406 2017.8521 1992.8093 1983.231 2462.1689 218355120 CueO Metal Resistance Copper Escherichia fergusonii superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia; 789.9064 425.373 520.8352 497.6166 676.4383 379.3709 670.0562 386.5106 326.2054 497.4046 218283333 tutFDG Organic Remediation Aromatics BTEX and related aromatics Eubacterium biforme DSM 3989 superkingdom:Bacteria;phylum:Firmicutes;class:Erysipelotrichi;order:Erysipelotrichales;family:Erysipelotrichaceae;species:Eubacterium biforme; 3545.3474 5608.2279 3993.0662 4077.9997 6622.1108 5215.5418 5126.7903 2767.2546 5378.4304 5238.9408 2363.6366 3218.5329 254818781 narH Stress Oxygen limitation Mycobacterium intracellulare ATCC 13950 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium intracellulare; 3780.8021 2174.8866 3402.7776 3622.2009 4190.209 2655.7282 3206.571 1921.7227 3197.6447 3844.7872 5520.7578 2590.4702 237731556 phzF soil_benifit Citrobacter sp. 30_2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter; 4358.5521 4732.0881 3576.8443 4829.8979 2856.2161 5312.4585 3821.3178 3413.9011 3834.5503 3623.3007 2944.5755 5498.4324 88707079 czcA Metal Resistance "Cadmium,Cobalt,Zinc" gamma proteobacterium KT 71 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;genus:Congregibacter;species:Congregibacter litoralis; 3828.1779 1979.8873 2296.7444 3162.8544 1773.7973 1593.8766 1601.8288 1432.3591 1524.3915 1932.4099 4689.987 2452.8996 189334108 katE Stress Oxygen stress Burkholderia multivorans ATCC 17616 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 1215.0453 698.3175 931.3849 1367.1226 632.8872 628.0295 623.2004 957.1211 913.8824 1156.0514 758.0963 564.6585 255300249 sod_CuZn soil_benifit Campylobacter showae RM3277 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Campylobacteraceae;genus:Campylobacter;species:Campylobacter showae; 902.7041 701.5796 875.9895 570.0499 757.9398 701.7141 827.6538 679.7504 508.8998 540.3798 85831339 phoA Stress Phosphate limitation Leeuwenhoekiella blandensis MED217 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Leeuwenhoekiella;species:Leeuwenhoekiella blandensis; 1812.2318 1319.3897 1135.5338 1243.3928 1545.2401 1170.9577 1108.8384 2191.8175 1410.7211 1091.9671 2350.6153 1468.7159 119868170 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium sp. KMS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 2692.9473 1291.5344 1950.7919 2772.2284 1706.8132 918.6002 1569.7809 1330.2959 1238.8061 1520.7699 1598.0926 1437.3237 240103616 proV Stress Osmotic stress Thermococcus gammatolerans EJ3 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Thermococcus;species:Thermococcus gammatolerans; 2220.414 1742.5869 2227.1778 2053.2133 2749.455 2111.1698 1607.3383 1974.9008 1792.8063 1900.5223 3251.1935 2241.5084 115401794 ABC_multidrug_fungi Fungi function metal resistance Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 2266.9822 1994.1462 2158.4739 2229.6557 2772.3771 2415.3358 1901.6376 3275.2346 1777.6976 2123.7247 3203.7049 2183.8554 91807194 nosZ Nitrogen Denitrification uncultured alpha proteobacterium superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 450.4521 704.0899 524.2229 600.8008 586.5065 843.3714 469.078 546.6647 696.8095 197104901 ArsC Metal Resistance Arsenic Phenylobacterium zucineum HLK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Phenylobacterium;species:Phenylobacterium zucineum; 604.9807 1412.3084 1480.1051 803.442 1548.3305 819.4251 1317.5621 833.5979 654.7559 1124.1112 620.8786 77973424 amyA Carbon cycling Carbon degradation Starch Yersinia frederiksenii ATCC 33641 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia frederiksenii; 1517.0437 780.6472 458.3442 1236.5852 494.0657 1196.9218 1729.2056 1624.9018 699.9962 1499.5983 882.6639 742.6866 146324840 pectinase Carbon cycling Carbon degradation Pectin Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 953.3439 584.8363 900.4753 579.1559 534.0423 467.3339 453.3883 642.6403 711.7751 182678865 AceB Carbon cycling Carbon degradation Others Beijerinckia indica subsp. indica ATCC 9039 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Beijerinckia;species:Beijerinckia indica; 1111.0055 1000.968 820.0488 1106.4587 2387.7829 1052.5338 972.0387 1166.2527 1372.2215 1431.4774 1391.1206 1015.6583 199584251 CopA Metal Resistance Copper uncultured bacterium superkingdom:Bacteria; 2451.9047 4921.9899 4377.817 3694.3676 3177.476 4959.035 3962.4578 4138.7339 4938.0278 5060.6171 2587.5459 5296.7001 146192094 Catechol Organic Remediation Aromatics Other aromatics Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 897.5058 2344.5665 2524.0983 1273.2808 2176.0428 1510.256 1339.6882 2592.7594 1885.4036 1850.1802 1406.9048 2286.5184 7672528 catechol_B Organic Remediation Aromatics Other aromatics Geobacillus thermoglucosidasius superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 620.7906 398.6013 731.7903 457.1954 974.2811 611.8347 849.0633 735.2489 446.396 256676977 sigma_24 Stress Sigma factors Streptomyces sp. SPB78 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 2809.5329 2403.4116 2568.5455 2695.2209 3081.3416 2701.6066 1827.1958 2870.9882 2012.4527 2264.1428 3876.0574 3207.6775 13171023 pectinase Carbon cycling Carbon degradation Pectin Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus; 927.9837 471.0031 844.5209 481.8432 546.1448 647.1101 662.3603 616.3511 490.2569 261192508 chitin_synthase Fungi function major biomolecule Ajellomyces dermatitidis SLH14081 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces dermatitidis; 19421.9467 34547.9726 29592.0987 29573.5041 22350.8467 34475.2456 30913.8579 28721.9257 40549.9785 33166.0748 19897.2967 37308.7174 46201746 sigma_70 Stress Sigma factors Magnetospirillum magnetotacticum MS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magnetotacticum; 2913.3444 2230.3932 2436.149 2720.9174 2991.4166 2382.8059 1079.9449 2601.6923 2333.5499 2429.5179 4002.547 3496.3246 227963401 SMR_antibiotics Antibiotic resistance transporter Tsukamurella paurometabola DSM 20162 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Tsukamurellaceae;genus:Tsukamurella;species:Tsukamurella paurometabola; 744.9955 586.3503 1091.2681 710.8107 710.0759 1436.0751 658.3629 623.8025 573.7081 159184206 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 4585.9878 3471.0338 3277.8979 2953.1179 4281.2527 3796.0255 3085.8239 3663.8907 4485.621 3303.8063 1536.1091 3408.0119 56416812 gyrB other category gyrB Anaplasma marginale str. St. Maries superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rickettsiales;family:Anaplasmataceae;genus:Anaplasma;species:Anaplasma marginale; 1566.7297 1463.9157 2085.3693 668.7259 1469.8142 1556.6934 2310.8146 1195.7051 1714.7423 2034.4474 167617444 sigma_70 Stress Sigma factors Burkholderia thailandensis Bt4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia thailandensis; 7471.299 5014.6797 8314.4484 5469.9148 4974.4134 5118.7895 5145.395 10921.8788 5916.9724 6723.9334 9342.4235 7683.2902 6164963 xylanase Carbon cycling Carbon degradation Hemicellulose Streptomyces thermocyaneoviolaceus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 1209.5246 978.0676 1443.6546 1474.8262 508.6645 1365.9877 2514.9965 1824.8764 1370.3576 1083.3466 1431.1216 922.4019 227421462 AceB Carbon cycling Carbon degradation Others Desulfohalobium retbaense DSM 5692 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfohalobiaceae;genus:Desulfohalobium;species:Desulfohalobium retbaense; 2228.6196 1954.8864 3471.9128 2318.4568 2772.7183 2465.2001 1663.6762 2507.9811 1809.1497 2131.5301 4008.1447 2679.7442 169609725 Catechol Organic Remediation Aromatics Other aromatics Phaeosphaeria nodorum SN15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Phaeosphaeriaceae;genus:Phaeosphaeria;species:Phaeosphaeria nodorum; 2023.6025 4154.8631 4482.2472 1814.1824 3091.466 3973.3174 4119.9337 4258.9609 5292.5311 2574.3406 2690.4433 4633.2807 214029918 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Ruegeria sp. R11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 3871.1881 2577.3135 2451.4452 4408.7128 1916.0696 2607.3031 2914.7473 2598.2812 2524.1365 2611.1341 3831.2516 2036.4592 227237879 pstB Stress Phosphate limitation Mobiluncus curtisii ATCC 43063 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Mobiluncus;species:Mobiluncus curtisii; 2439.0634 2408.4959 2805.5828 1532.8626 586.3037 2547.9831 1973.1544 2495.2474 2475.9581 2058.3786 1205.9709 2937.5553 229492512 ureC Nitrogen Ammonification Rhodococcus erythropolis SK121 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus erythropolis; 978.3548 1084.1493 1146.264 894.6401 1509.9564 982.8674 1417.0778 867.3074 875.3593 944.8268 1870.5316 1058.3796 158138839 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2089.0043 1875.8698 1790.494 1206.6972 2762.8594 1753.894 1360.3002 1577.913 1699.3119 1819.707 2048.4578 1460.8472 91684634 CODH Carbon cycling Carbon fixation Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 3610.3732 2186.2784 2059.6926 2431.4202 3145.5893 3322.8983 2936.6994 2060.704 3542.8027 3025.3932 1407.5533 2197.2719 84778367 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 577.2026 1627.683 1511.743 1336.7552 1180.6292 855.051 1089.3963 1774.4137 1528.7249 1177.1113 1626.5418 37956521 gyrB other category gyrB Pelobacter propionicus superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter; 2165.743 1444.7509 1506.8723 2239.8741 987.7728 1691.8852 1240.2413 1171.0157 1319.5566 1652.8579 673.9862 1118.8294 54024955 pimF Organic Remediation Aromatics Aromatic carboxylic acid Nocardia farcinica IFM 10152 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Nocardia;species:Nocardia farcinica; 1383.3386 3026.7009 2398.0701 1263.3638 3506.1111 2717.9464 2473.6005 2524.5276 2239.4731 2299.3618 1426.4368 2172.3065 110621500 CopA Metal Resistance Copper uncultured methanogenic archaeon superkingdom:Archaea;phylum:Euryarchaeota; 1015.5085 675.2025 580.6634 869.7243 1783.5046 799.3238 1512.1889 942.4508 877.0484 756.46 1004.2604 16082553 ferredoxin_oxidoreductase Bioleaching Electron transport Thermoplasma acidophilum;Thermoplasma acidophilum DSM 1728 2640.9508 2095.3476 2478.5606 3319.0336 1562.7776 2084.2784 16347.8547 1622.1299 1877.4824 2434.353 1441.1158 1438.9441 119177647 nirK_fungi Fungi function nitrogen Coccidioides immitis RS superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Coccidioides;species:Coccidioides immitis; 803.829 816.6831 996.5634 1778.6888 1402.3271 555.0051 592.395 441.1417 783.2794 115522265 ChrA Metal Resistance Chromium Rhodopseudomonas palustris BisA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1429.4785 3574.8904 2308.0852 1794.9648 1654.2764 2228.0232 2070.5137 2265.1936 2718.454 2459.5333 2569.9129 115282430 ChrA Metal Resistance Chromium Burkholderia cepacia AMMD superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ambifaria; 1414.1388 2910.7564 2487.1826 1913.8319 2424.0904 2581.0066 2811.6281 1969.8493 3055.7257 3299.8087 1559.0526 2837.2405 167071030 SMR_antibiotics Antibiotic resistance transporter Rhizobium leguminosarum bv. trifolii WSM1325 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 603.9497 1272.9175 1458.9356 490.1789 1861.523 1452.6295 1142.7329 1300.011 1164.4976 1337.4168 901.283 1229.1963 118003463 nmoA Organic Remediation Aromatics Nitoaromatics Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 3474.707 9153.8822 8534.3145 6215.7313 5096.4559 10031.9301 7778.0875 8082.5917 11657.5682 8005.2724 4216.7023 8829.241 69938258 nosZ Nitrogen Denitrification Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 1789.8536 944.1341 860.2723 1970.3068 1114.5932 1275.9508 1949.629 1160.2671 1198.7804 1501.0053 1075.7737 1428.1917 198262243 alkB Organic Remediation Other Hydrocarbons gamma proteobacterium HTCC5015 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 1796.9055 2576.7932 1867.5387 2405.6379 1607.2283 2956.7161 1934.603 1816.3127 1903.9781 1915.1745 1547.6049 2191.8614 77456427 fnr Stress Oxygen stress Pseudomonas fluorescens Pf0-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 2967.9064 3471.4926 3556.0238 2940.1326 3616.2281 3592.4555 2683.4368 3863.1391 3041.5023 2747.4677 4172.5931 2764.0746 86146958 CadA Metal Resistance Cadmium Vibrio sp. MED222 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 806.005 484.4349 525.4733 861.2319 611.2354 624.8841 558.2689 661.789 564.0764 588.7622 1094.5369 764.8918 169761868 gyrB other category gyrB Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 3065.5726 2165.4571 1244.8562 2361.3985 2044.3309 1463.8915 2237.1761 1399.4113 1533.2679 1724.7475 1995.3875 2728.7138 261344996 SMR_antibiotics Antibiotic resistance transporter Providencia rustigianii DSM 4541 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia rustigianii; 677.2833 607.7959 558.3248 111018321 obgE Stress Radiation stress Rhodococcus jostii RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1943.4385 1553.4831 1711.3265 2474.9921 2198.8435 2666.1512 2473.0723 1854.499 1914.3649 1463.2185 1533.8209 149142173 gyrB other category gyrB Roseovarius sp. TM1035 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 3135.2325 3379.6952 4879.9166 2532.823 1477.3081 3594.5643 3049.2683 4658.1961 3940.5556 3472.7323 2076.3984 3613.4753 261821990 nrfA Nitrogen Dissimilatory N reduction Pectobacterium wasabiae WPP163 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium wasabiae; 956.0841 1081.8939 1547.7282 1338.4673 2231.4236 969.0628 1430.108 978.5922 712.2073 1327.5275 1313.3618 227549680 fnr Stress Oxygen stress Corynebacterium lipophiloflavum DSM 44291 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium lipophiloflavum; 2163.9565 1491.72 1477.5898 2318.1691 2166.0701 1655.9004 1458.8409 1558.4735 1179.0005 1487.8177 2796.0314 1752.8107 194552345 pcc Carbon cycling Carbon fixation Pseudomonas aeruginosa 2192 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 3049.7359 1056.7656 1445.3557 3199.4405 1380.6713 1247.7283 2356.4321 1341.6013 1262.1972 1777.0288 1658.2022 1744.6812 291070918 phzF soil_benifit Citrobacter youngae ATCC 29220 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter;species:Citrobacter youngae; 1589.9407 1367.9133 1725.6188 961.4978 1237.0718 1629.2034 1379.3063 1478.4158 1380.7251 1284.8787 1443.9988 1830.1376 149812984 pstB Stress Phosphate limitation Roseobacter sp. AzwK-3b superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 1109.266 1563.537 1277.3593 1357.1782 1421.3395 1393.9261 1250.3695 1151.1768 1244.0598 1331.253 1640.9045 1972.5145 145217912 linB Organic Remediation Pesticides related compound Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 1546.7693 1025.712 1007.4846 1838.2626 1436.5451 1040.1051 1048.3903 1072.4477 1097.4163 1591.2456 1382.1471 84501186 hrcA Stress Heat shock Oceanicola batsensis HTCC2597 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola batsensis; 3747.302 4149.3838 4592.6891 2188.9467 2866.113 2285.0067 2903.1376 7685.2689 3474.7496 2936.2626 4154.5026 2924.4684 66769441 katE Stress Oxygen stress Xanthomonas campestris pv. campestris str. 8004 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas campestris; 3920.6592 3806.0993 5092.8183 2541.9456 1973.8962 4244.774 2926.7548 4671.2324 3738.0854 3867.1797 1421.1514 4918.4878 255057592 pstA Stress Phosphate limitation Geobacter sp. M18 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 642.7086 668.6146 446.48 705.039 940.7206 1082.3651 588.3314 679.4941 630.3237 565.6198 113900330 nmoA Organic Remediation Aromatics Nitoaromatics Herpetosiphon aurantiacus ATCC 23779 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Herpetosiphonales;family:Herpetosiphonaceae;genus:Herpetosiphon;species:Herpetosiphon aurantiacus; 671.1179 707.3896 845.4797 634.8944 999.4927 474.6717 538.507 933.303 563.6717 49650741 cellobiase_fungi Fungi function carbon degradation Yarrowia lipolytica superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Dipodascaceae;genus:Yarrowia; 864.6638 721.4897 418.0221 478.615 481.9663 90954613 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 3416.0213 904.4835 1871.9297 3365.8654 1527.7215 1644.4588 1332.5996 1701.8365 1557.2648 1772.0374 3183.4762 1917.1457 67525473 atzA Organic Remediation Herbicides related compound Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 472.7927 702.1403 523.4959 723.8046 545.408 931.2533 698.4566 533.4019 640.3187 668.0217 817.2945 254485596 MFS_antibiotic Antibiotic resistance transporter Roseobacter sp. GAI101 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 1935.5537 771.2814 1164.9472 1841.4815 892.1978 1272.1968 1505.4444 1911.192 1254.2992 1727.4386 839.8292 146194956 fnr Stress Oxygen stress Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2676.0763 2736.4765 3334.6601 1768.9669 2196.4432 2725.1952 2255.2876 2896.3224 2488.0963 2592.9166 3399.7457 3364.137 119193128 NRPS Fungi function iron Coccidioides immitis RS superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Coccidioides;species:Coccidioides immitis; 682.1458 497.8656 1179.1377 1206.2451 1366.6412 882.7351 2003.8832 1068.8799 1175.9252 679.8023 1260.8833 779.0269 156446963 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2387.9938 808.8974 1397.7098 2371.973 1173.254 1229.691 1554.8352 1786.1428 1051.666 1360.7212 1078.9208 1571.3789 6729263 gyrB other category gyrB Mycobacterium scrofulaceum superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 1031.3587 1180.7124 1735.4185 1186.0002 1210.3388 1675.9268 1253.7991 1407.4001 1497.6455 1424.2583 1228.6182 1833.5432 242775754 amyA Carbon cycling Carbon degradation Starch Talaromyces stipitatus ATCC 10500 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus; 565.0296 509.7545 615.7783 499.7397 716.2521 507.8819 578.7012 894.3158 626.8405 68008900 pulA Carbon cycling Carbon degradation Starch Exiguobacterium sibiricum 255-15 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;genus:Exiguobacterium;species:Exiguobacterium sibiricum; 1150.3151 1014.6514 1199.2022 1142.9626 1230.417 1088.2793 1000.0777 1096.284 940.6982 1212.6206 1599.1977 1257.4986 119822372 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Stenotrophomonas maltophilia R551-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 1412.2449 667.1319 1401.1883 550.0531 586.5557 658.5975 796.9332 890.1782 1244.6426 679.6139 220921200 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 7542.1409 3592.3939 4353.2238 5547.6756 3928.4347 5029.336 6467.614 4797.9279 4943.0631 5912.568 4284.4036 4266.2425 189197501 ureC Nitrogen Ammonification Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 807.2139 695.4887 850.2691 923.1769 761.2675 892.0607 797.8589 834.5358 864.6573 160364762 MFS_antibiotic Antibiotic resistance transporter Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 2066.1157 4616.3729 2947.0229 2200.8909 2959.1854 2882.0019 2946.518 2871.0003 3388.1281 3803.1252 1587.2574 3063.3162 71848619 ChrA Metal Resistance Chromium Dechloromonas aromatica RCB superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Dechloromonas;species:Dechloromonas aromatica; 1352.7935 1164.6313 1624.3513 1732.2438 1743.9929 1183.2667 2522.7275 814.787 1446.6232 1047.0221 1300.1395 1082.727 93354865 narH Stress Oxygen limitation Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 1018.4368 1877.2332 1217.6819 1091.3777 2243.3681 828.01 1137.4107 2045.4284 1236.3832 1154.4992 1483.588 194292772 nirS Nitrogen Denitrification Cupriavidus taiwanensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus; 2254.3559 1266.8648 1475.118 1288.1974 1296.8702 1058.2471 1194.3604 2778.7052 1336.1563 15129.568 2122.4536 2249.0017 229870101 B_lactamase_C Antibiotic resistance Beta-lactamases Spirosoma linguale DSM 74 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Spirosoma;species:Spirosoma linguale; 7961.0405 5632.4898 5075.211 4160.2123 6594.9038 4789.0034 5359.613 4489.632 4830.5343 5933.7843 5607.3424 5256.3173 194292948 ChrA Metal Resistance Chromium Cupriavidus taiwanensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus; 1883.5439 1440.1763 1664.8293 2482.7038 1465.2687 2134.0529 2800.0776 1083.9497 1567.0965 1493.3786 1721.0265 2031.0006 20092391 MFS_antibiotic Antibiotic resistance transporter Methanosarcina acetivorans C2A superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanosarcinales;family:Methanosarcinaceae;genus:Methanosarcina;species:Methanosarcina acetivorans; 1006.6835 734.1241 736.1366 884.819 485.3429 531.3009 569.4971 504.4455 497.0856 167566213 type_III_secretion virulence secretion Burkholderia oklahomensis EO147 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia oklahomensis; 2731.4711 1748.9285 2057.4826 2855.8381 1800.5681 1784.6142 1707.8825 1673.2583 1892.5677 2470.376 2024.5053 1699.7352 118173763 CODH Carbon cycling Carbon fixation Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 1610.1026 1318.1788 1472.4702 889.3556 732.6394 888.3453 1243.0045 1179.5599 1668.137 123229694 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 1859.9836 630.8202 831.9784 1274.541 651.9616 722.7276 531.9373 663.5234 716.6739 2362.7957 858.4915 224603441 fnr Stress Oxygen stress Lutiella nitroferrum 2002 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Lutiella;species:Lutiella nitroferrum; 3535.3538 1877.3989 2747.3812 3351.346 2715.0813 2130.8822 2153.2829 2037.028 2537.2665 2180.7964 3200.918 3022.1603 90591036 xylA Carbon cycling Carbon degradation Hemicellulose Flavobacterium johnsoniae UW101 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Flavobacterium;species:Flavobacterium johnsoniae; 388.8538 804.7688 935.4414 459.4417 493.8002 551.2888 542.1059 737.9733 574.1178 600.2637 644.9397 167946095 hrcA Stress Heat shock Endoriftia persephone 'Hot96_1+Hot96_2' superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;genus:Endoriftia;species:Endoriftia persephone; 5618.8429 3873.173 5891.8041 6245.5346 3074.3456 5986.5918 6539.6068 6613.8232 4804.4674 6654.6888 4686.9474 4460.1283 124294907 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae; 1307.3655 1119.5864 1108.9847 1269.6784 1210.6801 1233.2058 929.3867 1052.5754 823.0905 1082.8664 1757.5919 1279.1408 110169106 glnA Stress Nitrogen limitation Trichodesmium erythraeum IMS101 superkingdom:Bacteria;phylum:Cyanobacteria;order:Oscillatoriales;genus:Trichodesmium;species:Trichodesmium erythraeum; 1786.7373 1117.3437 1901.0668 1954.2533 2269.172 1534.4852 1439.8806 2054.095 1355.1907 1504.6456 1824.3083 1501.1379 118028683 CadA Metal Resistance Cadmium Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 1288.1976 1603.3575 1655.5094 1382.724 3887.994 1260.4262 2580.0442 1483.4391 1374.8308 778.882 1573.5874 1746.9607 116812205 nifH Nitrogen Nitrogen fixation Clostridium sp. MK31 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium; 2891.5169 3088.4131 2797.9204 2969.5823 4396.2992 3591.6628 2395.6144 3100.812 2472.0208 2970.5882 5264.9198 3877.26 93452595 atzA Organic Remediation Herbicides related compound delta proteobacterium MLMS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria; 1487.4254 401.7483 810.4164 1028.8896 853.1033 575.3983 757.3103 1201.2764 525.8796 706.2221 1136.7481 792.1505 213926036 atzB Organic Remediation Herbicides related compound Pseudomonas syringae pv. tomato T1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 1035.6436 692.0499 687.7467 1149.9346 1505.5578 708.1451 1227.3029 830.5808 1068.6292 1357.7264 1348.5166 71556061 pstS Stress Phosphate limitation Pseudomonas syringae pv. phaseolicola 1448A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas savastanoi; 956.2373 1036.6408 847.4171 1119.5316 977.5532 1203.3413 260462447 fnr Stress Oxygen stress Mesorhizobium opportunistum WSM2075 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium opportunistum; 1011.8953 784.0999 1168.0975 643.2201 685.7608 918.3638 721.221 572.6384 904.8397 662.9348 1006.6635 184194675 silC Metal Resistance Silver Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 9248.9829 9427.2143 8794.2801 10790.1268 7530.7049 10774.8921 9170.7463 8190.1955 11548.0168 12422.6109 8145.3256 10521.0585 75907489 nmoA Organic Remediation Aromatics Nitoaromatics Anabaena variabilis ATCC 29413 superkingdom:Bacteria;phylum:Cyanobacteria;order:Nostocales;family:Nostocaceae;genus:Anabaena;species:Anabaena variabilis; 736.4929 550.6394 647.1533 484.9242 755.6242 740.5757 462.2531 728.4657 404.1554 222438868 phzF soil_benifit Labrenzia alexandrii DFL-11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia alexandrii; 1503.9069 1486.2152 1069.9171 1203.1495 1994.092 2103.2383 1847.1725 1625.2829 1977.4219 1409.3784 56542754 silC Metal Resistance Silver Zymomonas mobilis subsp. mobilis ZM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Zymomonas;species:Zymomonas mobilis; 904.4421 558.3164 801.4746 954.2244 837.4474 1340.0093 881.3968 910.6556 1406.9391 728.5124 187922060 pbrA Metal Resistance Lead Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 920.5288 1648.1094 1101.2206 931.0208 2345.7496 1451.777 1260.6239 1354.7465 1513.3949 1712.5314 1305.5481 192289170 fnr Stress Oxygen stress Rhodopseudomonas palustris TIE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1515.4318 1275.4533 1541.7525 1458.1015 868.8207 2719.6663 2232.4275 1370.5063 1839.7282 1408.1116 1314.7704 1138.8786 171691576 phenol_oxidase Carbon cycling Carbon degradation Lignin Podospora anserina superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Lasiosphaeriaceae;genus:Podospora;species:Podospora anserina; 1235.1736 1265.8709 1389.7858 1228.0927 1467.9395 1194.8341 1165.0081 1081.4441 1006.0662 975.568 2011.3879 1183.4401 153004687 sped_bac soil_benifit Anaeromyxobacter sp. Fw109-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter; 1743.4719 2029.8508 1493.2488 1760.7894 1252.8272 1370.9532 626.7447 2037.0885 1517.9496 1443.6321 2965.4289 1418.3594 111223613 tfdA Organic Remediation Aromatics Chlorinated aromatics Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 4086.0377 3603.7093 2654.0522 3302.802 3344.3673 3065.9642 2081.1696 2461.4038 3778.4606 2370.4027 5103.3063 2790.8664 111116464 xylG Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas putida superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 16955.4635 7855.5814 12910.2054 15616.1783 9868.59 9862.0166 9484.6968 7861.5192 11544.8414 13883.9949 16635.3081 11057.8089 6946705 gyrB other category gyrB Rikenella microfusus superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Rikenellaceae;genus:Rikenella; 692.9051 1718.3718 790.8172 765.9519 1892.2185 1281.365 1290.653 1471.2956 1490.9332 791.6974 254575128 type_III_secretion virulence secretion Pantoea stewartii subsp. stewartii DC283 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pantoea;species:Pantoea stewartii; 11639.7572 14467.5574 12516.825 10668.7556 12447.1058 11494.3111 5861.8006 11506.5999 11203.3412 8957.4578 12308.7653 9319.5957 225199718 arcB Stress Oxygen limitation Desulfonatronospira thiodismutans ASO3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfohalobiaceae;genus:Desulfonatronospira;species:Desulfonatronospira thiodismutans; 2282.4965 847.2907 1100.9153 1977.3747 1136.8706 1131.0992 1124.5985 1037.8082 928.9444 1318.7354 1496.1802 1549.9702 283798841 sigma_24 Stress Sigma factors Clostridium sp. M62/1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium; 603.4594 681.8796 649.377 541.3536 650.8181 708.4242 644.9641 740.8724 993.3004 814.2321 119474701 mdlC Organic Remediation Aromatics Aromatic carboxylic acid marine gamma proteobacterium HTCC2143 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 2644.5641 2997.7444 2034.2945 2455.3284 4431.0837 2462.4221 1965.4961 2038.6633 302405140 nep soil_benifit Verticillium albo-atrum VaMs.102 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Plectosphaerellaceae;genus:Verticilium;species:Verticillium albo-atrum; 1476.4244 2253.8777 1880.9732 1935.2137 1626.0077 2433.0291 1935.578 1331.9299 2378.9924 1898.3746 2603.0177 2263.3657 116609257 AceB Carbon cycling Carbon degradation Others Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 1566.2237 2027.2131 2360.7908 1977.2651 1231.3839 2532.2641 1992.8144 1893.4592 2455.0832 2444.8606 1394.2197 2171.359 94265724 nrfA Nitrogen Dissimilatory N reduction delta proteobacterium MLMS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria; 5082.7947 2702.1735 4343.2933 4718.9206 4792.9327 3559.776 2809.8961 2932.6353 3242.6445 3290.708 6852.5857 3988.7529 110818905 benAB Organic Remediation Aromatics Aromatic carboxylic acid Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1200.9683 2262.2495 1503.3973 1619.8556 1127.9597 2261.8245 1759.2118 1388.9532 2078.6711 2344.5859 1305.497 2010.0176 146342811 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2484.881 2867.4062 2924.8792 2883.329 3173.94 2600.5096 2809.7355 1852.9826 2352.6425 2596.836 3057.9957 2596.0318 35211761 cydA Stress Oxygen limitation Gloeobacter violaceus PCC 7421 superkingdom:Bacteria;phylum:Cyanobacteria;class:Gloeobacteria;order:Gloeobacterales;genus:Gloeobacter;species:Gloeobacter violaceus; 824.5732 790.701 764.9975 1279.8967 1145.7863 493.9654 627.6913 684.6779 701.6774 575.3011 16126632 vanA Carbon cycling Carbon degradation Others Caulobacter crescentus CB15 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter;species:Caulobacter vibrioides; 2848.7082 1230.8162 1420.7985 2675.5512 2103.3519 1382.993 1319.7529 1349.3238 1599.4456 1525.672 5506.951 1833.3647 149360295 linB Organic Remediation Pesticides related compound Marinobacter algicola DG893 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter algicola; 1710.1598 1459.6979 1491.7658 1865.8084 2163.2072 1324.3793 967.961 1171.5967 1454.6027 1351.2632 2785.1483 1990.9846 77460699 PobA Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas fluorescens PfO-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 1873.5771 3717.8953 3284.2081 2117.4182 3391.8609 2060.0342 2139.2548 3419.7959 2315.098 3084.6982 3169.59 3052.2891 1841418 Cl_peroxidase_fungi Fungi function Organic remediation Drechslera biseptata superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Drechslera; 2821.0645 1737.8042 2459.9356 3576.9169 2319.9646 1924.6499 2149.2454 2230.5874 2281.0365 2323.7158 1875.9612 2832.7913 84042971 Catechol Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 4752.649 2192.3693 3320.6586 4334.2188 2493.9942 3040.9648 3395.824 3559.6608 2908.8675 3574.3749 2439.0378 2737.8389 109290282 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1410.4181 2363.5274 1957.2474 1607.5415 2437.6275 2193.868 2156.5634 1831.0254 1789.5562 2170.2553 2012.9014 2793.4893 110635929 gyrB other category gyrB Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 1893.7793 1159.6872 798.305 1657.3731 1824.7605 1118.5808 1785.4556 1093.5 943.9483 1011.591 1268.9555 1798.1961 256685013 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Jonesia denitrificans DSM 20603 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Jonesiaceae;genus:Jonesia;species:Jonesia denitrificans; 1281.0853 5207.4746 3964.6124 2196.5112 2150.2578 2941.1549 2420.0689 4279.2356 2990.6576 5208.8696 992.3602 6448.5186 169832337 dsrA Sulphur sulfite reductase Candidatus Desulforudis audaxviator MP104C superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Candidatus Desulforudis;species:Candidatus Desulforudis audaxviator; 3097.1788 2413.4145 1598.5728 1934.07 2338.1658 1698.795 2125.8289 2489.982 1372.8738 1632.3284 3244.4987 1653.8485 78220484 tutFDG Organic Remediation Aromatics BTEX and related aromatics Desulfovibrio desulfuricans G20 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio alaskensis; 1128.2995 723.7262 1161.0215 1481.3736 596.902 1284.4909 599.1818 916.0877 873.9265 1040.1101 870.2191 1026.342 73542041 ChrA Metal Resistance Chromium Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 690.8768 607.3866 875.5969 907.3788 1155.5078 1008.4968 911.9843 843.0219 957.657 1124.7205 148262924 fnr Stress Oxygen stress Geobacter uraniireducens Rf4 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter uraniireducens; 1497.8489 2631.4906 1316.0852 1023.0666 2920.9819 1152.4932 1938.5946 985.5232 1703.3774 1088.204 2089.852 982.2167 260610791 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio metschnikovii; 1362.2633 1444.8274 1552.628 1657.4005 2273.1535 2113.5628 1329.8811 1263.8434 1256.3844 1405.9007 2047.5449 1289.4263 227858915 srt virulence surface protein Finegoldia magna ATCC 53516 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XI. Incertae Sedis;genus:Finegoldia;species:Finegoldia magna; 1953.862 1003.6801 854.66 1417.2144 1140.417 1844.7797 2036.1686 825.3854 1467.64 979.8855 93455778 nifH Nitrogen Nitrogen fixation delta proteobacterium MLMS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria; 766.9439 601.0806 596.6734 1019.4383 615.2224 565.7116 574.2751 492.6903 767.5036 492.715 26990766 pcc Carbon cycling Carbon fixation Pseudomonas putida KT2440 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1427.4234 953.1559 1481.6172 1441.5457 1045.1065 942.3508 1056.4194 945.1016 954.8284 953.5813 1608.4712 1038.8522 89056654 pcaG Organic Remediation Aromatics Other aromatics Jannaschia sp. CCS1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Jannaschia; 1393.7755 2601.7877 1822.3646 1632.4847 1849.5785 809.539 2472.637 2157.0419 2662.1081 2413.5164 1133.4087 2399.1923 53804189 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Methylococcus capsulatus str. Bath superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae;genus:Methylococcus;species:Methylococcus capsulatus; 1479.5541 1621.35 1776.0272 1692.2881 2232.1251 1674.9995 2041.3679 1289.7708 1646.682 1411.6291 1977.0807 1578.506 88855974 czcD Metal Resistance "Cadmium,Cobalt,Zinc" marine actinobacterium PHSC20C1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria; 1585.3603 2168.4134 2093.6132 1498.5366 1717.715 2070.7429 2219.4432 2204.1517 2068.6065 1940.2153 1611.8587 2411.6064 78485420 hly virulence hemolysin Thiomicrospira crunogena XCL-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Thiotrichales;family:Piscirickettsiaceae;genus:Thiomicrospira;species:Thiomicrospira crunogena; 2257.0155 2157.6714 4646.3979 1208.9298 1839.3025 1351.51 1304.0272 5334.0261 1549.3901 1561.7731 2976.0237 2698.3516 313744652 cat_fun soil_benifit Humicola grisea superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;genus:Humicola; 1545.8156 1943.2397 1507.9191 2004.9889 1635.1083 1915.8855 1779.7664 1357.9662 1661.6043 1869.5428 1318.8546 1844.996 222081543 grpE Stress Heat shock Agrobacterium radiobacter K84 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 1109.2727 1375.4569 868.8651 1196.9514 1518.4313 878.1136 1040.235 498.4325 1369.0179 1226.3945 2309.6293 1137.574 118569138 glnA Stress Nitrogen limitation Mycobacterium ulcerans Agy99 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium ulcerans; 1944.2847 809.4836 1158.0302 1856.1242 484.1016 831.1556 726.22 1041.5617 1850.3269 767.9541 119481743 cutinase_fungi Fungi function carbon degradation Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 1470.9574 2109.186 2034.2194 1651.127 1554.17 2115.5669 1669.1246 1688.195 1863.0843 1777.0288 2259.1296 1746.1505 76167188 CopA Metal Resistance Copper Chloroflexus aurantiacus J-10-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aurantiacus; 2393.7025 3142.7856 2780.2404 2442.1043 3761.5719 2710.4383 2092.5939 4052.2805 2235.6289 2551.3997 3908.0582 3847.09 254590061 pstA Stress Phosphate limitation Neorickettsia risticii str. Illinois superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rickettsiales;family:Anaplasmataceae;genus:Neorickettsia;species:Neorickettsia risticii; 1097.2306 538.1704 946.3782 1229.6542 715.3866 1283.7912 636.9988 1033.5666 196258879 amyA Carbon cycling Carbon degradation Starch Cyanothece sp. PCC 7822 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 533.6548 842.5887 683.5885 601.2793 858.829 592.7476 572.1464 665.3113 657.0004 1179.2717 755.9109 78514929 phtA Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1115.1225 657.6942 964.9566 1795.6907 588.047 852.8458 597.4218 835.0191 1169.4176 692.5887 283441526 srt virulence surface protein Gardnerella vaginalis 409-05 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Gardnerella;species:Gardnerella vaginalis; 5940.326 6466.987 6834.8668 4974.4205 3964.837 6274.4021 4828.4153 5660.0063 8125.4826 6240.5267 3894.7726 6263.0907 196480517 TerC Metal Resistance Tellurium Phenylobacterium zucineum HLK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Phenylobacterium;species:Phenylobacterium zucineum; 3743.3663 4141.1903 4582.2497 3999.8005 3643.6056 5044.9952 5128.8205 4112.9592 4101.9866 3748.5101 4351.5284 4218.8109 119373686 catB Organic Remediation Aromatics BTEX and related aromatics Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 950.8723 1951.4586 1836.0851 1205.9831 2709.166 1350.0443 1775.6371 1942.1063 1430.1166 2509.693 2355.2626 118169354 phzF soil_benifit Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 2070.5618 1810.6661 1515.6591 2132.2869 1259.0648 1793.1318 2013.9249 1260.89 1518.7651 1411.6012 2378.3517 1550.2448 1314850 katE Stress Oxygen stress Rhizobium sp. superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium; 2422.085 2744.9821 3316.6602 2347.2284 2125.345 2693.433 2371.0165 3824.1512 2869.5932 2979.6442 3657.7339 2869.8412 13249523 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 19279.3897 15486.8047 15760.5697 19928.5153 8657.3031 23154.4873 21025.9825 12077.9699 17293.9876 19592.0494 18963.5565 12840.2403 77378753 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1077.9956 719.1006 904.5024 758.5331 512.031 534.5368 1151.9797 37924921 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 1048.2162 1352.584 732.7354 980.4165 1065.6355 788.8305 735.2418 667.6588 527.9719 858.5191 633.3222 29609332 Catechol Organic Remediation Aromatics Other aromatics Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 465.6333 1055.16 834.1303 555.5708 550.6029 687.0171 920.956 896.394 745.4154 1038.6473 903.5885 262025618 acc soil_benifit Vibrio mimicus VM223 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio mimicus; 906.6935 2672.0756 1030.8495 1270.5687 662.2933 2059.8697 4009.0051 686.1829 2103.9843 1804.1074 192293620 pstB Stress Phosphate limitation Rhodopseudomonas palustris TIE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 3464.7402 1433.2316 1268.7633 2327.6341 1588.0128 1985.7613 3368.8517 3245.1676 1883.6796 2857.0813 1898.4883 1637.6512 10175298 AceA Carbon cycling Carbon degradation Others Bacillus halodurans C-125 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus halodurans; 2600.9226 4208.3499 3081.5568 2090.3245 4086.3962 3542.7856 2732.753 2992.1883 4148.9143 3496.729 4434.4373 2691.1901 99083341 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 1066.9844 789.7708 847.3263 988.071 720.9161 1026.7701 789.5327 885.7846 894.682 995.4159 20501.8499 960.0949 71845711 SMR_antibiotics Antibiotic resistance transporter Dechloromonas aromatica RCB superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Dechloromonas;species:Dechloromonas aromatica; 2194.2867 3974.5941 3626.5693 2849.6468 2942.3872 4309.4898 3811.7287 3617.4708 5166.944 5246.7127 1255.3335 4993.1781 114848900 dnaK Stress Heat shock Coxiella endosymbiont of Amblyomma americanum superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Legionellales;family:Coxiellaceae;genus:Coxiella; 544.2664 661.619 1099.3741 589.3824 672.9468 916.1603 768.1192 827.4562 1062.9387 121583120 CopA Metal Resistance Copper Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 1194.2521 401.8885 934.1038 1163.865 774.4212 706.3705 675.7111 522.6746 723.2708 942.694 724.7982 929.7075 269144127 fnr Stress Oxygen stress Brevundimonas subvibrioides ATCC 15264 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Brevundimonas;species:Brevundimonas subvibrioides; 5704.8041 6494.9696 6777.3195 4518.5943 3279.7721 7279.4497 5902.5906 8392.6184 8327.5916 4818.0438 3874.8562 5995.873 111065112 Cyanide_hydratase_Fungi soil_borne_pathogen fungi virulence Phaeosphaeria nodorum SN15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Phaeosphaeriaceae;genus:Phaeosphaeria;species:Phaeosphaeria nodorum; 1565.4805 809.8021 951.1561 1005.5 772.8363 797.5995 778.5226 854.9853 546.3855 1393.2588 699.5465 196031974 cat_bac soil_benifit Bacillus cereus W superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus cereus; 852.0693 606.7347 831.3439 15832.9541 766.0392 876.0709 619.3506 774.8958 186460626 CopA Metal Resistance Copper bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3;genus:Pedosphaera;species:Pedosphaera parvula; 2095.9354 2552.2574 3668.6175 1586.1597 1255.3488 3212.3713 2413.9668 3297.8454 3499.9695 3097.6178 1568.2779 3192.0295 163261564 pstA Stress Phosphate limitation Bordetella petrii superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella; 926.5867 839.4434 880.7613 960.443 976.4161 1021.4098 873.9166 941.5481 719.5548 838.1314 1251.1772 891.7208 238499127 ara_fungi Carbon cycling Carbon degradation Hemicellulose Aspergillus flavus NRRL3357 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus flavus; 573.2669 506.8097 629.8807 368.0716 355.3027 325.8198 478.661 574.3005 196224572 CadA Metal Resistance Cadmium Chthoniobacter flavus Ellin428 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Spartobacteria;genus:Chthoniobacter;species:Chthoniobacter flavus; 1585.3805 1792.6991 2525.4951 1673.5088 1879.4777 2590.5487 2375.9201 1902.5964 2778.4344 2763.9419 1296.9322 2452.5343 7262474 replicase_Carmovirus soil_borne_pathogen replication Japanese iris necrotic ring virus superkingdom:Viruses;family:Tombusviridae;genus:Carmovirus; 815.8509 615.9002 1097.8911 439.6899 699.8496 598.2641 893.7432 489.8829 721.7323 615.8938 77963046 amyA Carbon cycling Carbon degradation Starch Yersinia mollaretii ATCC 43969 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia mollaretii; 2035.5035 1553.9928 1545.3292 2024.6996 2429.4559 1696.6263 1700.8398 1050.0941 2056.6197 2278.2684 1855.5162 1909.5655 118618410 sqr Sulphur sulfide oxidation Mycobacterium ulcerans Agy99 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium ulcerans; 1622.1648 524.0134 1525.5207 683.3763 507.2986 949.2646 886.9769 699.5885 619.9389 1776.9317 1165.2584 89346155 gyrB other category gyrB Rhodoferax ferrireducens T118 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Albidiferax;species:Albidiferax ferrireducens; 815.2599 1036.5049 798.494 8962.4232 1363.0389 622.8351 930.4075 678.2145 946.5343 1048.7641 949.8366 978.32 54307643 sigma_70 Stress Sigma factors Photobacterium profundum SS9 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Photobacterium;species:Photobacterium profundum; 2312.5043 2789.2052 3340.6504 3251.902 2455.184 3586.0392 3128.539 2777.1922 3146.6689 3168.3684 3823.876 2651.332 91715273 fnr Stress Oxygen stress Shewanella denitrificans OS217 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella denitrificans; 1579.6516 1210.479 1398.9021 912.4469 650.0277 1255.7598 1359.2908 1740.7638 1265.4123 1193.3138 951.5424 1306.221 283950352 sigma_70 Stress Sigma factors Conexibacter woesei DSM 14684 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Solirubrobacterales;family:Conexibacteraceae;genus:Conexibacter;species:Conexibacter woesei; 1276.0548 1025.7375 1448.5399 994.3992 1337.0833 1119.3286 719.9632 1749.1642 1133.3483 908.3348 2005.694 1316.1495 46519947 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2620.8964 3529.9427 2573.4744 2238.9152 4319.9491 2456.2113 3225.6345 7214.5091 2447.1037 2089.5889 3984.961 2333.7577 161784925 glnA Stress Nitrogen limitation Gluconacetobacter diazotrophicus PAl 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter;species:Gluconacetobacter diazotrophicus; 4062.0207 3604.3082 6282.6426 2087.9137 3085.5696 3348.9821 3577.4722 6850.3404 4251.9899 4166.6378 2608.3272 4961.3877 156742920 sigma_70 Stress Sigma factors Roseiflexus castenholzii DSM 13941 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus;species:Roseiflexus castenholzii; 2387.564 4160.7923 2834.2348 2829.0799 3577.3895 2782.1462 2780.1897 4047.4248 2997.1169 3179.5453 3546.3438 3941.2532 121998184 AceA Carbon cycling Carbon degradation Others Halorhodospira halophila SL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Halorhodospira;species:Halorhodospira halophila; 3312.1224 3569.4615 3493.7366 3380.7409 4233.7591 4361.2087 2911.8664 3230.4851 3396.061 3466.1888 4363.6368 3992.186 177840849 ara Carbon cycling Carbon degradation Hemicellulose Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 2798.9281 2007.5386 2019.7672 3408.3962 1680.6301 2297.1662 1921.7449 1717.9473 2574.5081 2367.3096 2022.8956 2307.2405 124111021 tutFDG Organic Remediation Aromatics BTEX and related aromatics uncultured bacterium superkingdom:Bacteria; 661.9033 561.4752 559.2341 822.3509 426.5951 663.3806 795.6986 417.6248 903.8536 194307675 gyrB other category gyrB Pelodictyon phaeoclathratiforme BU-1 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Pelodictyon;species:Pelodictyon phaeoclathratiforme; 906.5592 1182.5346 1865.605 1437.4867 2295.8441 1157.5718 1359.5891 821.6017 1173.8051 980.8498 1198.7797 879.8453 212692219 ara Carbon cycling Carbon degradation Hemicellulose Bacteroides dorei DSM 17855 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides dorei; 589.8525 990.6954 888.1154 501.1376 1260.6006 522.4044 739.3021 774.734 636.2998 742.9262 897.8475 797.1354 68229976 pcc Carbon cycling Carbon fixation Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 7090.9635 5323.0878 8368.7098 3614.4481 4329.2204 4953.8366 5108.5068 9018.6998 6153.2478 5829.8582 4189.3383 7941.3897 3228364 Van Antibiotic resistance other Streptomyces toyocaensis superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 902.9996 738.9663 734.6681 866.1082 1146.8033 983.1476 706.369 856.6744 1028.966 786.8057 679.4903 56178727 AceA Carbon cycling Carbon degradation Others Idiomarina loihiensis L2TR superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Idiomarinaceae;genus:Idiomarina;species:Idiomarina loihiensis; 1931.6181 828.3425 829.8557 1456.54 1253.0547 1215.0638 1959.3672 1190.9757 1150.5654 1015.7896 1304.0555 1131.3258 114778935 ZntA Metal Resistance Zinc Mariprofundus ferrooxydans PV-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Zetaproteobacteria;order:Mariprofundales;family:Mariprofundaceae;genus:Mariprofundus;species:Mariprofundus ferrooxydans; 1443.9668 719.816 1016.2373 1361.8764 895.9265 1185.9298 1030.0551 991.9069 1181.9464 5509.8369 83837111 obgE Stress Radiation stress Roseovarius nubinhibens ISM superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius;species:Roseovarius nubinhibens; 3596.2692 5498.1577 4710.7061 4011.3476 6096.5335 4639.62 4630.9782 4491.714 4326.3334 3644.8743 4206.3957 3179.4507 192801000 atzC Organic Remediation Herbicides related compound Geobacillus sp. Y412MC10 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 494.4323 503.7786 432.7863 704.1382 401.8719 336.4319 760.0903 78515664 ChrA Metal Resistance Chromium Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 50503.9871 42849.4161 56501.2842 42326.3244 43933.8132 49113.503 39439.3454 57210.8441 58143.2078 44684.9004 53244.9118 42359.9192 254968988 pstC Stress Phosphate limitation Acidithiobacillus caldus ATCC 51756 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus;species:Acidithiobacillus caldus; 525.8237 1022.02 563.0295 489.33 434.2966 765.6883 14719370 groEL Stress Heat shock Gardnerella vaginalis superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Gardnerella;species:Gardnerella vaginalis; 1144.4317 721.6236 548.0223 687.0405 1134.9747 741.4131 764.9839 704.0087 1051.3864 790.8191 613.8045 855.5116 116249151 nahF Organic Remediation Aromatics Polycyclic aromatics Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1860.9239 429.5908 972.4735 1382.0118 1067.365 1204.0709 1489.237 2197.7122 883.6301 861.6814 1056.0974 753.0657 27529221 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria; 3742.0365 3765.0046 2788.6006 3189.1536 3063.3301 4130.9118 3014.9035 4021.4166 3442.4937 4096.7358 2258.6491 3394.1559 198263931 bphC Organic Remediation Aromatics Polycyclic aromatics Octadecabacter antarcticus 238 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Octadecabacter;species:Octadecabacter antarcticus; 608.8592 783.8455 986.9839 951.5938 648.5726 732.248 884.3057 810.9224 867.0056 156072052 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 2628.9827 3705.5351 2102.5405 1663.5096 2653.842 2363.5123 3251.3622 798.729 2246.7769 2053.1192 3266.7695 2081.1512 254785264 pilin virulence pilin Teredinibacter turnerae T7901 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;genus:Teredinibacter;species:Teredinibacter turnerae; 458.0037 668.0667 498.4529 640.8122 657.5009 488.6202 364.6553 562.3641 625.6115 539.6264 302885346 ABC_multidrug_fungi Fungi function metal resistance Nectria haematococca mpVI 77-13-4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Nectria;species:Nectria haematococca; 1058.277 1073.7627 478.1479 569.6634 392.7777 358.9679 1022.8955 540.9309 213952386 sigma_24 Stress Sigma factors Corynebacterium amycolatum SK46 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium amycolatum; 1705.4585 1975.2872 2319.8912 1512.2615 2801.8023 1928.9872 1602.4023 1538.7556 1531.5323 1769.8711 2248.3425 1369.8979 47496802 akbF Organic Remediation Aromatics BTEX and related aromatics Pseudomonas putida superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1655.4232 1383.5421 1276.5741 1575.5349 1909.5665 925.9513 1166.5451 1084.8757 1084.4286 1335.0998 1166.6588 1876.5392 13751049 PceA Organic Remediation Others Desulfitobacterium hafniense DCB-2 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium;species:Desulfitobacterium hafniense; 562.0342 1212.5433 817.1627 645.7561 1785.0972 858.3264 1275.9825 626.8076 892.6929 631.8312 1027.4602 983.5932 99030585 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 1081.4405 1511.0632 1165.1798 1093.8569 1453.0781 1206.645 1046.1602 1141.3045 1037.687 655.7174 260404427 ahpC Stress Oxygen stress Dialister invisus DSM 15470 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Veillonellaceae;genus:Dialister;species:Dialister invisus; 2261.878 1239.2008 1824.6037 2295.5682 1199.4561 1338.842 1813.2136 1930.8978 1408.0069 1648.235 1515.5681 1024.2409 66801977 narG Nitrogen Denitrification unidentified bacterium superkingdom:Bacteria; 7618.9065 6165.4854 7047.9575 6293.3552 7109.0864 7257.7182 5653.0788 8618.6415 6918.909 6731.6718 7559.2214 7363.2304 269129957 grpE Stress Heat shock Slackia exigua ATCC 700122 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Coriobacteriales;family:Coriobacteriaceae;genus:Slackia;species:Slackia exigua; 6158.3591 5054.5002 4559.3937 5767.7538 3733.3222 5072.8139 6067.7504 4552.3322 4743.8546 6072.3376 4786.2296 4139.4791 168334737 ChrA Metal Resistance Chromium Epulopiscium sp. 'N.t. morphotype B' superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;genus:Epulopiscium; 653.5887 1009.6309 774.751 685.3557 1203.684 997.6293 1046.2912 744.4612 624.383 641.2892 720.9543 846.0225 163794811 pstB Stress Phosphate limitation alpha proteobacterium BAL199 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 1222.6883 2419.5182 2070.6263 1035.2726 2562.5519 1617.4328 1765.3598 1698.762 1710.6812 2207.1716 1467.9994 1272.1236 60317497 coat_Nepovirus soil_borne_pathogen structural Grapevine fanleaf virus superkingdom:Viruses;order:Picornavirales;family:Secoviridae;genus:Nepovirus; 621.7273 796.7665 551.1937 586.3217 697.8993 818.5277 553.2894 549.2435 632.6304 792.4941 957.2363 797.3002 56477911 sigma_70 Stress Sigma factors Aromatoleum aromaticum EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 795.3129 421.2126 682.5998 919.0286 746.6631 676.5542 738.1185 485.7709 585.6021 766.8693 157404625 rd Organic Remediation Chlorinated solvents Dehalococcoides sp. VS superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides; 1081.9984 2336.6151 2013.8351 1373.6837 1455.0496 2352.4596 1926.0118 1975.8167 2849.9239 2616.6006 2290.7892 23491973 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 5585.2567 4530.6601 4182.7701 6792.2191 3002.726 4175.7881 5953.1744 4862.9581 4362.8936 5160.1001 4639.8116 3814.1392 115399028 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 10990.0034 10314.8883 8706.9346 11027.6239 15050.8093 9335.4307 11676.1871 9347.8574 10050.3353 10913.7361 8817.2817 9753.0847 188582038 phzF soil_benifit Methylobacterium populi BJ001 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 3062.3892 2046.4416 3208.7772 3167.6211 993.0626 1696.3721 1564.4014 2839.6623 1905.5913 2179.0433 1551.3888 2576.8615 73541250 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 2278.8698 646.1113 984.454 2067.2305 1120.7361 1116.4869 1109.2513 1738.1614 798.6045 1196.6302 1051.9413 1181.9295 118054333 tftH Organic Remediation Aromatics Chlorinated aromatics Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 1387.5026 1131.832 946.317 935.4451 1552.5823 2046.9998 657.1167 1433.355 1456.1609 979.6753 90424355 iro virulence Iron oxidation Rhodopseudomonas palustris BisB18 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 12794.4781 12408.1142 14826.747 8674.0124 15952.0603 10443.1831 11649.8858 19841.5495 16774.8877 11715.6714 15209.7122 11850.7559 71555754 CopA Metal Resistance Copper Pseudomonas syringae pv. phaseolicola 1448A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas savastanoi; 469.9692 450.0416 454.753 831.6221 377.1077 538.7051 229861645 endochitinase Carbon cycling Carbon degradation Chitin Stackebrandtia nassauensis DSM 44728 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Glycomycetaceae;genus:Stackebrandtia;species:Stackebrandtia nassauensis; 4397.5192 4383.5027 6408.8162 3680.4428 2452.1126 5413.8472 3925.0316 4848.0032 6722.3915 5066.408 2901.3553 5325.9129 150396765 catB Organic Remediation Aromatics BTEX and related aromatics Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 1615.3143 882.7503 1032.2866 824.0179 687.8466 589.0302 659.5861 919.2891 959.5666 707.7766 118470179 BADH Organic Remediation Aromatics Other aromatics Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 1469.4933 971.7933 1362.5339 1181.2359 1014.8888 953.9444 643.0637 1043.5234 1144.6504 1645.1087 978.7045 157405184 trzN Organic Remediation Herbicides related compound Methylobacterium populi BJ001 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 450.5353 1157.3171 710.7773 695.6973 787.162 1267.1715 833.3809 727.5878 940.5235 932.7224 753.6176 163845994 sigma_24 Stress Sigma factors Chloroflexus aurantiacus J-10-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aurantiacus; 355.8639 1199.2614 831.7685 842.4815 1100.2959 454.288 870.2687 942.761 148254146 nagG Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2230.9703 1294.7456 1474.4783 2014.0841 1484.1124 1470.5061 1069.7635 1769.0541 1793.7338 2124.832 1660.2684 28853960 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas syringae pv. tomato str. DC3000 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 664.6205 1875.7551 1580.2821 875.7923 1817.6317 1320.7599 1035.4748 1605.5833 1080.8466 1471.9055 1222.3438 240103179 pstB Stress Phosphate limitation Thermococcus gammatolerans EJ3 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Thermococcus;species:Thermococcus gammatolerans; 1390.3905 1512.2482 1555.2161 1580.3108 1301.0033 1430.3595 1952.6113 1347.4597 1783.4289 1367.3652 1646.8625 1468.9356 261418948 cda Carbon cycling Carbon degradation Starch Geobacillus sp. Y412MC61 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 465.8079 840.0657 530.693 997.5736 555.0835 542.4548 680.4631 23491548 cbdA Organic Remediation Aromatics Chlorinated aromatics Burkholderia sp. TH2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1790.9685 2881.2956 3205.753 1634.9777 983.4421 3638.6405 3113.1804 3657.5238 5247.4614 2757.5994 3171.6232 119411732 exopolygalacturonase_fungi Fungi function carbon degradation Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 2086.8014 3218.5783 1691.4365 2571.7377 1676.459 2709.2269 2521.0184 1463.1766 2649.4457 2702.7945 1743.0811 2658.3492 197767856 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Streptomyces clavuligerus ATCC 27064 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces clavuligerus; 6701.5209 4164.6366 6481.1356 3943.7092 3015.9881 6100.1015 5006.0088 6434.7281 4617.8946 5342.2081 3314.0499 7033.3793 17132665 catB Organic Remediation Aromatics BTEX and related aromatics Nostoc sp. PCC 7120 superkingdom:Bacteria;phylum:Cyanobacteria;order:Nostocales;family:Nostocaceae;genus:Nostoc; 4844.4655 3469.6194 3737.3748 4402.7406 4892.3375 4014.7164 3369.0238 4375.3193 3157.8752 3561.6061 16499.8078 4836.8353 126721064 oxyR Stress Oxygen stress Roseobacter sp. SK209-2-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 2136.6084 5472.061 4674.5755 2628.5413 3798.543 2203.4351 2431.2868 5714.3786 3702.4746 3604.2508 3591.8944 5117.346 116251752 nasA Nitrogen Assimilatory N reduction Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1625.1736 1559.3447 1891.4853 1708.5334 563.9883 2279.787 1697.5478 697.5329 1662.0353 1501.452 1573.059 1045.1004 116646290 pimF Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia cenocepacia HI2424 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia cenocepacia; 1804.4008 1072.2033 1722.9706 772.941 737.9142 1285.0259 427.3283 803.7945 995.9111 119964465 hly virulence hemolysin Arthrobacter aurescens TC1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter aurescens; 3545.7638 1635.1884 1869.6615 2725.5472 1671.795 2645.4532 3447.1016 3829.4408 1924.7771 2946.5134 1869.6427 2027.4165 160340732 pbrA Metal Resistance Lead Burkholderia multivorans ATCC 17616 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 3280.8789 4873.8235 3998.0968 2732.1494 4620.4009 4020.5792 4721.9716 1902.3922 3660.6317 3270.3516 3541.5389 4117.9606 296094881 per_arc soil_benifit Thermosphaera aggregans DSM 11486 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Desulfurococcales;family:Desulfurococcaceae;genus:Thermosphaera;species:Thermosphaera aggregans; 2354.131 2252.2721 1970.0421 1752.6394 962.5929 2477.9578 2507.5409 929.1966 2361.6005 2176.0842 1637.7572 1455.7251 163812754 mer Metal Resistance Mercury Dehalococcoides sp. VS superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides; 3967.135 4014.6185 4993.5863 2119.6372 3878.0972 2805.3958 3014.1579 7239.989 2890.5205 3507.1473 7053.8398 5167.881 226240690 ahpF Stress Oxygen stress Rhodococcus opacus B4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus opacus; 1157.864 1055.16 656.7604 1051.8055 1723.6114 957.4268 992.5303 1402.7157 1221.5541 1032.7179 873.4384 1248.4765 151562265 katA Stress Oxygen stress Ochrobactrum anthropi ATCC 49188 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum;species:Ochrobactrum anthropi; 1744.6405 3031.2373 2573.6343 1789.0337 1857.0107 2576.9235 3017.771 2698.7686 3297.8139 3517.2194 1082.2123 3488.9503 149184386 TehB Metal Resistance Tellurium Erythrobacter sp. SD-21 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 1600.7134 2444.0986 1856.6778 1967.7727 3034.3978 1927.7608 2404.2056 2437.401 2048.7217 2374.7688 2334.3345 39933561 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 2591.8155 1549.1889 2385.6097 2874.2064 1099.234 2107.999 1405.9402 2341.0026 1659.3327 2374.8358 2338.1225 2415.4377 118470171 iro virulence Iron oxidation Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 935.6132 464.32 840.7267 415.3181 555.3196 342.1632 474.7863 540.5584 94311453 ChrA Metal Resistance Chromium Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 1703.672 1913.2437 2371.6082 1630.4438 1778.6699 1707.0808 1800.8028 3264.0018 1564.9181 2390.9825 1730.22 2400.9776 63256935 pulA Carbon cycling Carbon degradation Starch Pseudomonas syringae pv. syringae B728a superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae; 2487.7421 1723.9021 3041.5586 3055.8219 2449.3402 3134.7033 3166.7578 3192.8529 2114.4567 2800.5009 2109.8167 1956.8734 240170514 oxyR Stress Oxygen stress Mycobacterium kansasii ATCC 12478 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium kansasii; 2230.9971 1201.1006 2121.9507 2084.9003 1594.1083 1761.0955 1439.5079 1326.6888 1941.3943 2168.3011 2979.4352 1875.5207 209519923 AceB Carbon cycling Carbon degradation Others Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 8029.5452 8532.1092 6920.7224 8603.4976 6597.6909 9731.7275 8681.7465 8391.178 7987.3844 9368.7182 5258.6974 9427.9851 219676486 xylC Organic Remediation Aromatics BTEX and related aromatics gamma proteobacterium NOR5-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 2142.7738 1314.0463 1369.8324 1271.5412 2664.2698 1372.5535 1249.5169 2964.0337 1110.5474 1139.1491 3801.4611 1186.6122 119372937 gyrB other category gyrB Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 1157.1924 1254.1987 445.5785 1164.6458 1540.595 827.0528 1794.8498 769.6018 853.5991 599.3145 1066.284 925.8624 108464563 ppx Phosphorus Phosphorus utilization Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 1172.0888 1058.7152 1776.3471 687.3555 1512.993 1237.7408 1222.471 1678.5768 1484.479 1144.1106 68347206 fnr Stress Oxygen stress Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 977.1056 1485.4634 736.4686 1236.5167 1816.3614 936.9666 1458.1986 897.0073 1025.2695 791.6566 1141.8654 1363.1828 169886102 NiR Nitrogen Assimilatory N reduction Synechococcus sp. PCC 7002 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 842.6886 341.1828 653.9061 496.1891 441.8653 587.5739 545.9148 345.8365 638.1514 114308776 sigma_24 Stress Sigma factors Nitrosomonas eutropha C91 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas;species:Nitrosomonas eutropha; 829.8406 1643.4074 1212.3605 1085.3902 1000.2844 1722.755 1265.3955 1310.6506 1367.3521 1428.8031 1855.7072 87199697 nahA Organic Remediation Aromatics Polycyclic aromatics Novosphingobium aromaticivorans DSM 12444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium;species:Novosphingobium aromaticivorans; 4142.4682 3111.1926 4272.6217 2261.1144 1815.3819 3563.9338 3223.5431 4005.0375 3548.7203 2319.8038 2463.9873 3791.0574 83576241 ArsC Metal Resistance Arsenic Rhodospirillum rubrum ATCC 11170 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum rubrum; 2271.0254 3207.6834 2613.836 2529.0699 2512.6504 2891.2449 3075.3057 3486.9344 3404.8291 2091.7501 3573.6515 28629184 cat_bac soil_benifit Rhodospirillum rubrum superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum; 4299.047 4126.1796 4581.8136 5112.4231 5060.7361 4903.4339 4353.2726 4370.0902 3819.9775 3605.4567 6958.318 4986.3531 118703430 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 4968.7814 1766.7043 3383.4691 4543.5238 2975.9456 2663.4157 2652.146 3598.0192 2509.9381 3438.4178 3490.0782 2844.4363 119536938 glnA Stress Nitrogen limitation Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 4562.1992 3885.9314 1472.8499 4515.0329 2560.9214 1878.2106 2687.5202 2151.0987 2380.7397 2188.5013 6310.7588 2432.4796 148359914 CadA Metal Resistance Cadmium Legionella pneumophila str. Corby superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Legionellales;family:Legionellaceae;genus:Legionella;species:Legionella pneumophila; 385.8674 751.3265 619.9055 555.9825 858.6554 517.3761 526.563 890.1302 821.1695 828.9532 190610419 mycobacterium_LysB_lipase Bacteria phage LYSIS Mycobacterium phage Pukovnik superkingdom:Viruses;order:Caudovirales;family:Siphoviridae; 809.3093 603.2341 576.8996 847.0686 1022.9049 599.4137 755.3374 672.5513 567.6128 616.4843 189218408 pstC Stress Phosphate limitation Methylacidiphilum infernorum V4 superkingdom:Bacteria;phylum:Verrucomicrobia;order:Methylacidiphilales;family:Methylacidiphilaceae;genus:Methylacidiphilum;species:Methylacidiphilum infernorum; 4033.3696 3441.8534 3780.4843 3341.2372 4977.7692 3588.178 2787.7471 3016.2637 2707.8418 2994.6966 6698.588 3800.4687 91798470 pstB Stress Phosphate limitation Chromohalobacter salexigens DSM 3043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Halomonadaceae;genus:Chromohalobacter;species:Chromohalobacter salexigens; 2674.5048 3854.4637 3366.5161 2825.1008 3330.6501 3055.1683 3945.2766 3727.029 3259.1977 3550.852 2693.7227 2897.66 228912395 hly virulence hemolysin Bacillus thuringiensis IBL 200 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus thuringiensis; 965.4195 1425.5734 1185.7096 1183.3429 2216.1801 1512.7837 1089.706 1637.9502 1050.1866 1147.978 1757.5919 1422.9185 206590934 dehH Organic Remediation Chlorinated solvents Ralstonia solanacearum superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 2529.0329 2813.3141 2076.9655 2248.5994 26757.5459 2441.9281 2388.5717 3240.8221 2800.8237 2409.8091 1175.8121 2318.2127 196478338 CusF Metal Resistance Copper Phenylobacterium zucineum HLK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Phenylobacterium;species:Phenylobacterium zucineum; 14302.6833 11471.2178 15025.9768 16207.9251 7033.1914 10455.5969 8609.9658 13496.3849 11051.2644 13182.1165 9379.1091 13679.2044 262280534 phoB Stress Phosphate limitation Acinetobacter calcoaceticus RUH2202 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter;species:Acinetobacter calcoaceticus; 838.7175 913.9725 780.5261 742.6627 560.8417 505.1387 653.3523 640.61 473.6025 1586.2485 547.1087 226097257 fnr Stress Oxygen stress Brevibacillus brevis NBRC 100599 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Brevibacillus;species:Brevibacillus brevis; 990.4304 10790.5246 940.9373 818.8517 1273.1518 828.1596 964.52 1709.5106 868.8359 995.5448 1353.7143 1009.5611 283807809 sigma_24 Stress Sigma factors Kribbella flavida DSM 17836 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Kribbella;species:Kribbella flavida; 2310.3551 3547.8778 2687.4582 3397.6642 2149.1139 3524.7824 2452.9713 2127.8581 3111.3169 3375.1982 2176.1485 3250.2231 209883385 ChrA Metal Resistance Chromium Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 956.984 836.4978 800.0934 839.0967 1062.682 1075.6413 1241.4342 434.6587 797.393 718.5275 927.734 981.6157 119391625 narG Nitrogen Denitrification Microbacterium sp. D1-15 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Microbacterium; 11059.2671 5549.2426 9212.8433 12081.2306 7505.189 8021.79 10028.0071 13834.7962 7407.1626 7049.1786 8008.2172 12562.2975 111615152 PobA Organic Remediation Aromatics Aromatic carboxylic acid Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 2331.7528 1156.2849 1744.622 1908.3392 1739.3478 1556.112 1500.994 1089.784 1626.0983 1532.1039 1993.5376 1953.1245 90325009 ZntA Metal Resistance Zinc Photobacterium profundum 3TCK superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Photobacterium;species:Photobacterium profundum; 987.6634 2520.0824 1570.8169 858.5609 2012.0428 1426.097 2748.9089 860.0812 1653.9509 1409.7643 1704.0651 1305.3009 192764356 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 911.153 1075.6782 18068.8399 875.5856 975.7508 2212.0219 988.4006 624.5952 116634793 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2115.3988 2080.9357 2326.7103 1615.7189 825.522 2079.7915 1575.7569 1592.1745 1342.3904 1186.5169 2274.2005 163743455 oxyR Stress Oxygen stress Phaeobacter gallaeciensis 2.10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 2477.5872 3535.2053 3361.1074 2283.2815 1386.2075 3290.2786 3194.7681 17961.1451 4321.6389 9701.8857 2556.5542 3293.0034 154486351 gyrB other category gyrB Bifidobacterium adolescentis L2-32 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium adolescentis; 1945.3325 920.3948 1483.4346 1745.0236 735.7614 892.8999 15433.0166 1076.1753 1552.4157 1093.4318 1848.841 269141234 pstS Stress Phosphate limitation Brevundimonas subvibrioides ATCC 15264 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Brevundimonas;species:Brevundimonas subvibrioides; 2704.7945 3874.221 1611.2222 3804.7478 7684.4135 2303.3132 6236.4316 1643.9418 3567.8013 2145.5961 2798.8663 2617.9624 126174562 glucoamylase Carbon cycling Carbon degradation Starch Shewanella baltica OS155 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella baltica; 476.0031 1643.5857 881.0492 911.5155 1313.5925 1341.7286 1051.2693 684.8234 961.6779 1365.0873 1377.6841 94425287 xylanase Carbon cycling Carbon degradation Hemicellulose Sphingomonas sp. SKA58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 1295.9212 976.118 1534.7299 820.8927 722.6794 804.3641 672.0521 2002.5187 757.4255 803.4707 1466.3657 1042.4226 171060369 proO Organic Remediation Aromatics Other aromatics Leptothrix cholodnii SP-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Leptothrix;species:Leptothrix cholodnii; 4768.8013 4214.8423 6628.9586 5569.893 5848.8461 5215.5717 4557.1903 4289.8994 4725.4842 4447.0497 7181.1462 8068.5238 184192111 phoB Stress Phosphate limitation Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 920.3407 863.6777 664.9779 1063.7224 724.8989 982.5982 1462.2705 1032.1071 746.7318 836.1326 897.5591 545.6118 115257549 B_lactamase_C Antibiotic resistance Beta-lactamases Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1267.7537 635.6114 1176.1426 1537.2869 760.1447 997.9434 920.1531 4972.1931 924.5411 908.1115 118438679 ChrA Metal Resistance Chromium Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 1426.792 1060.9834 1141.5677 1698.5479 1481.3844 1066.847 979.9245 1159.7951 690.7819 959.9238 1693.4462 1305.2323 184203007 pcaG Organic Remediation Aromatics Other aromatics bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3;genus:Pedosphaera;species:Pedosphaera parvula; 1462.6966 1482.5453 751.2407 1172.0287 1156.1714 942.7921 1230.2163 1493.6067 963.1108 1149.3627 967.9246 107856917 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 4534.0317 810.2501 2249.1712 3568.849 1901.3191 1925.7268 1970.9407 2840.5096 1923.7519 2613.5299 2685.8546 2558.721 71020355 endochitinase Carbon cycling Carbon degradation Chitin Ustilago maydis 521 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Ustilaginomycetes;order:Ustilaginales;family:Ustilaginaceae;genus:Ustilago;species:Ustilago maydis; 1036.8525 789.2651 405.0951 353.0473 483.3959 467.9077 864.9097 491.6851 70731410 B_lactamase_C Antibiotic resistance Beta-lactamases Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 2437.5388 2279.7748 2445.5923 1632.9641 1843.5684 2428.5497 1964.1446 2321.8719 2102.9709 2152.1545 3439.4343 2443.6714 91693670 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 1694.8873 1339.765 1219.3263 535.8051 756.8744 860.9285 637.092 520.9483 1677.9504 256376150 sigma_24 Stress Sigma factors Actinosynnema mirum DSM 43827 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinosynnemataceae;genus:Actinosynnema;species:Actinosynnema mirum; 805.8485 1011.8225 737.7555 502.0212 608.8491 2196854 gyrB other category gyrB Citrobacter sp. MAM-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter; 1631.5003 1489.4136 1658.9117 1875.3692 1765.8911 1451.1937 1280.2953 1017.0252 1263.2806 1677.4017 2514.8955 1554.5568 119963087 AceB Carbon cycling Carbon degradation Others Arthrobacter aurescens TC1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter aurescens; 12876.5091 13115.772 14775.4033 15195.7465 16461.4272 16739.7654 12913.5493 15123.2597 12228.8204 17167.1991 15738.758 15229.4355 113943491 CopA Metal Resistance Copper Salinispora tropica CNB-440 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora tropica; 1878.7307 8491.1333 1182.7726 1802.9367 932.2593 3533.8268 2615.0054 1820.1074 2758.34 2594.3347 612.1228 2180.8068 157150209 CopA Metal Resistance Copper Streptococcus gordonii str. Challis substr. CH1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus;species:Streptococcus gordonii; 624.3636 579.616 428.18 446.7025 527.7598 72160583 sigma_24 Stress Sigma factors Thermobifida fusca YX superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiopsaceae;genus:Thermobifida;species:Thermobifida fusca; 3317.7237 1823.0392 3083.9994 3207.8371 1132.5668 3212.7901 4687.9164 1629.1504 3058.8709 4141.5133 2478.1859 2201.0208 170293847 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Aquabacterium sp. PL1F5 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Aquabacterium; 981.8741 1336.0378 1435.8541 1070.3931 1524.195 1406.1528 1318.365 1351.7325 1244.5491 1729.2475 2448.996 1486.0599 161164464 ppx Phosphorus Phosphorus utilization Sorangium cellulosum 'So ce 56' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Polyangiaceae;genus:Sorangium;species:Sorangium cellulosum; 5116.8859 9108.799 8938.8467 6417.0165 3811.7198 8523.8427 8290.7494 8799.9756 9465.2384 10409.8779 4466.7263 9220.9837 114571425 oxyR Stress Oxygen stress Maricaulis maris MCS10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Maricaulis;species:Maricaulis maris; 4302.2842 4615.5574 3747.7705 4126.0643 7017.6256 3561.6455 5409.1185 2191.5027 4151.4945 3301.0035 3926.9656 3589.2789 39996860 cytochrome Energy process Energy process Geobacter sulfurreducens PCA superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter sulfurreducens; 835.4217 594.2251 790.5602 889.0789 1239.3848 679.4342 692.5609 883.6603 824.8961 826.0493 819.335 221068186 CadA Metal Resistance Cadmium Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 5304.9246 5381.4105 5683.0778 5509.665 4236.5082 5704.9264 6978.7733 19355.5872 4394.4214 4666.4704 5545.2629 4513.8642 170659050 fnr Stress Oxygen stress Methylobacterium radiotolerans JCM 2831 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium radiotolerans; 22113.1881 14012.3127 17933.0597 21062.1361 18633.8108 16721.6533 15992.4911 11825.027 17497.6343 17928.4606 27181.1961 21195.8388 68535245 grpE Stress Heat shock Corynebacterium jeikeium K411 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium jeikeium; 2117.0375 1991.2027 2199.6061 1807.813 2190.8881 1916.6932 1630.1717 3144.1453 1903.11 2134.7795 2198.4117 254510297 B_lactamase_C Antibiotic resistance Beta-lactamases Rhodobacteraceae bacterium KLH11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 2413.6092 3859.1975 3530.7396 2451.2954 2482.0497 1901.7219 2299.1842 5620.3406 2459.3234 2883.3336 5280.5117 2898.2808 11558498 protease_aspartate_fungi Fungi function carbon degradation Hypocrea lixii superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Hypocreaceae;genus:Hypocrea; 647.6688 430.2407 646.1514 736.3105 613.5518 489.3823 427.3679 507.8805 506.5435 683.0607 90204944 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 4416.9289 6077.0903 6267.0853 4570.7134 8798.6465 5259.1393 5351.5379 4133.8754 5152.3944 4779.7317 7305.4975 4761.6781 255957055 Dyp Fungi function Organic remediation Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 6917.5525 8713.2192 9493.2033 9130.9481 7887.6124 8927.0567 12867.0597 7513.2119 8845.2412 8469.5343 8541.8156 5933.1916 78190869 clpC Stress Protein stress Bifidobacterium ruminantium superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium; 4292.8548 3559.6838 3792.6975 5558.9076 2323.2636 4521.3756 5305.1867 5106.8773 2962.01 5381.4694 3897.1511 2677.396 219862742 B_lactamase_C Antibiotic resistance Beta-lactamases Cyanothece sp. PCC 7425 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 1017.4025 1557.1785 2443.4623 955.1695 835.1282 2074.811 1697.2037 2069.2133 2441.5122 2136.5885 2557.1281 259504008 pstA Stress Phosphate limitation Erysipelothrix rhusiopathiae ATCC 19414 superkingdom:Bacteria;phylum:Firmicutes;class:Erysipelotrichi;order:Erysipelotrichales;family:Erysipelotrichaceae;genus:Erysipelothrix;species:Erysipelothrix rhusiopathiae; 455.4515 581.876 535.7368 837.7446 841.4557 841.4444 671.4563 854.2222 526.4827 94482874 rubisco Carbon cycling Carbon fixation Telmatospirillum siberiense superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Telmatospirillum; 2213.8978 1995.9047 2366.752 2405.5182 2284.0363 2477.4193 2233.1616 2159.9469 1944.6385 2138.0289 3200.7979 2637.1739 219679848 sigma_32 Stress Sigma factors gamma proteobacterium NOR51-B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 3037.4589 2675.5734 3085.1698 2555.3418 3464.8077 2780.8825 2100.5887 3029.881 2239.3449 2649.8934 5197.9873 3442.487 209873656 ppk Phosphorus Phosphorus utilization Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 2590.4454 2231.6929 3114.416 1371.6975 1394.2274 1584.1102 1747.9365 3819.2127 1881.2217 2046.7544 1702.936 2286.5092 121710330 tre_fun soil_benifit Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 850.1032 893.6991 939.9778 596.4578 819.7093 522.4631 1009.3087 690.7004 659.351 758.1203 795.1373 116249131 impJ soil_borne_pathogen secretion system type IV Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1244.4217 1050.9805 1869.5743 622.4429 1064.4831 1475.3481 1177.0977 2233.5288 1614.2863 1160.5068 863.6124 1432.9294 226089780 fnr Stress Oxygen stress Gemmatimonas aurantiaca T-27 superkingdom:Bacteria;phylum:Gemmatimonadetes;class:Gemmatimonadetes;order:Gemmatimonadales;family:Gemmatimonadaceae;genus:Gemmatimonas;species:Gemmatimonas aurantiaca; 1403.9034 1083.6779 1332.9655 3482.9603 1203.7409 1454.14 1369.7172 1426.5369 1058.6903 1683.8894 1843.8083 1536.128 158113526 TerD Metal Resistance Tellurium Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 1504.4621 2937.5413 2250.1308 1489.3068 2305.6502 1571.4971 2376.8376 1300.8542 3088.8553 2086.2608 1203.7047 1540.0936 119944667 sped_bac soil_benifit Psychromonas ingrahamii 37 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Psychromonadaceae;genus:Psychromonas;species:Psychromonas ingrahamii; 720.2263 664.2328 460.2361 751.3651 762.1126 971.2874 565.6474 508.2521 116694319 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 1559.4091 3087.6231 2783.3228 2512.2082 1772.508 3568.5404 2469.8038 2269.1638 3093.608 2955.2902 1890.3759 3009.8012 33520868 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 1330.8317 551.3827 887.6681 1115.3516 533.0382 783.8065 857.3214 510.8175 817.1608 905.4151 614.0282 14715451 xylF Organic Remediation Aromatics BTEX and related aromatics Pseudomonas putida superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 2737.0321 3885.358 2268.6832 2805.4723 5843.4616 2712.607 6462.5442 1625.9669 2938.7121 2554.3923 2592.9274 2211.938 68345965 atzA Organic Remediation Herbicides related compound Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 1606.7849 2810.2431 3577.6731 932.6782 827.0149 2702.4816 1531.9447 3663.9028 1898.3284 1690.8234 759.4897 1768.5832 161729065 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae; 2629.9229 2119.0487 2722.1988 2532.4258 3754.007 2638.349 1973.7968 2599.913 1895.2353 2178.9093 4682.0829 3254.8046 119375122 type_III_secretion virulence secretion Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 1895.0957 1854.5515 822.8913 1139.7985 1733.1291 1199.4345 1080.2259 1074.454 1817.1467 1263.8913 1644.6822 116743218 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1628.8407 1276.4855 901.8843 1131.6895 1159.2239 991.0036 816.8981 936.1444 1080.3107 690.6002 9008.8411 1040.3765 40795448 clamp_loader_T4_ATPase Bacteria phage REPLICATION Aeromonas phage 65 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 383.0376 400.2137 339.2211 449.8451 693.6997 430.6676 260647446 pcc Carbon cycling Carbon fixation Streptomyces scabiei 87.22 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces scabiei; 7353.8604 5813.8418 7855.6986 8282.2084 2595.3519 7288.229 10233.0489 6043.3001 8651.5951 6436.0847 7046.6805 5698.3067 88789176 pulA Carbon cycling Carbon degradation Starch Nitrococcus mobilis Nb-231 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Nitrococcus;species:Nitrococcus mobilis; 1191.4985 1997.9817 1675.1814 1811.1141 1824.8363 1839.1299 1224.1142 3198.4451 1346.1511 1993.3006 2495.9161 1871.4033 225194062 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1607.1072 2885.3095 2822.2595 2156.5383 1738.1154 3517.9732 2742.4511 2550.1523 3478.4073 3301.9303 1459.6148 3105.3784 183602920 xylA Carbon cycling Carbon degradation Hemicellulose Bifidobacterium animalis subsp. lactis HN019 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium animalis; 811.754 1144.0139 1045.8543 774.1019 1856.2902 964.7703 875.9125 1325.3573 979.163 1004.1095 1089.4437 1184.827 119898734 pheA Organic Remediation Aromatics Other aromatics Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 1029.1894 934.5645 789.3632 1058.9214 1373.5236 745.1821 814.1395 755.7545 746.0154 895.5436 1055.386 108771900 pstC Stress Phosphate limitation Mycobacterium sp. MCS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 1491.9118 656.7258 1009.3456 1351.3156 667.1551 757.2185 909.7208 927.8844 1019.2177 1089.4559 166516 pectinase Carbon cycling Carbon degradation Pectin superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus; 4304.6349 3919.0621 4835.135 2424.7496 2499.1133 4345.2054 3397.0226 5512.6488 3439.3252 3910.5688 1921.0794 5315.3802 224820660 amyA Carbon cycling Carbon degradation Starch Natrialba magadii ATCC 43099 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Natrialba;species:Natrialba magadii; 10275.4522 6662.2411 4688.3589 9729.0917 7392.5504 5520.0069 6103.094 6633.6255 4794.1547 5516.5946 14679.0327 5160.0124 257780573 glnA Stress Nitrogen limitation Desulfotomaculum acetoxidans DSM 771 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfotomaculum;species:Desulfotomaculum acetoxidans; 649.7105 696.3424 1053.2403 537.7914 704.7852 744.349 1100.1815 820.353 792.0809 818.0745 257044969 fnr Stress Oxygen stress Candidatus Accumulibacter phosphatis clade IIA str. UW-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;genus:Candidatus Accumulibacter;species:Candidatus Accumulibacter phosphatis; 1688.4263 3733.2756 2388.9393 1389.0112 2595.3077 2473.1718 2321.8149 1899.5719 1996.5694 1945.3853 3346.8435 1489.1908 145595788 chnB Organic Remediation Other Hydrocarbons Salinispora tropica CNB-440 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora tropica; 6069.491 6341.2307 9063.6245 4318.8296 13504.9801 7412.9196 5394.838 7019.6308 7648.1441 6095.8765 2087.3296 6668.4285 119486793 nifH Nitrogen Nitrogen fixation Lyngbya sp. PCC 8106 superkingdom:Bacteria;phylum:Cyanobacteria;order:Oscillatoriales;genus:Lyngbya; 1345.5938 1253.6636 981.5898 1309.4423 820.4549 1594.6693 1187.8453 915.8819 1150.9965 1099.7055 714.0832 774.12 254466214 nirK Nitrogen Denitrification denitrifying Rhodobacterales bacterium Y4I superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales; 1437.7797 978.8576 1293.0691 1828.8935 1413.6609 1491.5607 1111.1095 938.1901 1610.9547 1766.3537 1779.118 1551.467 42524021 norB Nitrogen Denitrification Bdellovibrio bacteriovorus HD100 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Bdellovibrionales;family:Bdellovibrionaceae;genus:Bdellovibrio;species:Bdellovibrio bacteriovorus; 504.4634 827.8583 466.0857 529.9722 620.2526 822.2795 699.705 789.3675 628.2687 85703114 pstA Stress Phosphate limitation Roseovarius sp. 217 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 2316.6952 1913.1927 2193.485 2210.26 3099.2774 2068.649 1757.5486 2137.5056 1957.1727 1962.2913 2763.43 2468.8566 2879917 arsenic_resistance_gene Bioleaching Metal Resistance Acidiphilium multivorum 1104.3498 778.3937 717.3346 1462.6354 836.4378 598.2756 494.547 861.3107 1391.1275 531.55 162952281 mer Metal Resistance Mercury Renibacterium salmoninarum ATCC 33209 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Renibacterium;species:Renibacterium salmoninarum; 4884.8967 1895.5485 2726.1535 4429.6015 2723.2908 3004.7481 2541.401 8312.2823 2414.5915 2637.1134 3286.9742 3336.6449 145011716 ara_fungi Carbon cycling Carbon degradation Hemicellulose Magnaporthe grisea 70-15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe;species:Magnaporthe oryzae; 3571.7553 926.1799 1743.1825 2121.637 1644.5312 1546.3904 1328.8029 1863.2954 1357.8816 1464.1337 3222.7084 1982.8687 77378703 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3433.1609 661.8865 1822.2919 2635.2805 1573.8311 1044.0685 2538.9349 1088.3072 748.5723 1139.4133 1554.3678 1840.3819 187928796 CopA Metal Resistance Copper Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 1414.6627 1620.3761 1058.7194 1035.3042 543.5411 803.8326 625.0801 611.7985 1901.3071 986.2677 110285689 nreB Metal Resistance Nickel Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 3047.1704 3586.4304 3935.0245 2763.0236 4734.9923 3380.151 4136.4738 2931.9816 3038.5435 3074.5367 4594.345 3495.4183 83952105 obgE Stress Radiation stress Roseovarius nubinhibens ISM superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius;species:Roseovarius nubinhibens; 794.1308 685.6149 352.7986 588.4272 638.6894 226939450 pstB Stress Phosphate limitation Laribacter hongkongensis HLHK9 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Laribacter;species:Laribacter hongkongensis; 761.5844 990.7974 1293.2291 685.8762 795.2943 975.5687 813.2449 856.111 1383.9519 1140.3848 1011.978 183598270 dmsA Organic Remediation Others Providencia stuartii ATCC 25827 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia stuartii; 5986.7681 4292.9223 4495.5653 5740.3364 4458.5244 5956.4613 6281.3031 7035.5842 5079.2566 5706.2623 3858.2553 4010.6903 184192108 pstA Stress Phosphate limitation Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 2825.1479 4991.7813 4127.9054 4211.2355 10565.9539 5347.875 2084.8438 4615.5407 5079.3906 5055.1187 3349.6784 5544.9576 257388952 pcc Carbon cycling Carbon fixation Halomicrobium mukohataei DSM 12286 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halomicrobium;species:Halomicrobium mukohataei; 2878.4338 3479.6351 4079.358 3499.6902 3886.6669 3566.4764 3407.0132 4998.4109 3446.8271 4746.8577 3487.8199 4228.3686 188030530 mgtB soil_borne_pathogen magnesium uptake Erwinia tasmaniensis Et1/99 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Erwinia;species:Erwinia tasmaniensis; 565.3788 1086.9272 1075.573 791.4019 1235.4602 723.8843 915.1406 1147.243 958.5677 1336.1885 1210.9185 261877037 narH Stress Oxygen limitation Selenomonas noxia ATCC 43541 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Veillonellaceae;genus:Selenomonas;species:Selenomonas noxia; 1877.0628 824.8129 1311.0545 1970.5396 1253.9363 1338.0195 1420.7827 959.9414 1088.296 1364.9645 1784.4875 1636.8639 189423690 pstB Stress Phosphate limitation Geobacter lovleyi SZ superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter lovleyi; 997.0391 737.5391 1264.0629 1082.6798 1408.8452 783.9787 745.2666 1447.3805 727.7673 1125.0868 1743.2973 1106.6213 154352117 pcc Carbon cycling Carbon fixation Bacillus amyloliquefaciens FZB42 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus amyloliquefaciens; 2249.3188 883.8109 924.8567 1754.2009 1030.2639 2117.5646 1231.4887 711.014 1085.089 116619551 ahpC Stress Oxygen stress Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 441.7639 724.8857 484.7335 467.25 827.4889 646.7248 466.7924 815.8688 567.3498 594.5018 594.7771 514.0275 225194055 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2017.0609 4011.0761 3573.5875 2606.3376 4262.1605 3334.9232 2779.1788 3113.7636 2875.7846 2987.2709 3127.9553 3149.7476 73542967 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 492.8579 1251.1533 957.4978 1049.3126 1306.1603 1553.7788 1138.9936 1278.6711 928.3891 1126.3709 1281.5204 1793.843 226245607 pstB Stress Phosphate limitation Rhodococcus opacus B4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus opacus; 2314.3848 2110.9062 2505.9894 2259.078 2042.8994 2585.8524 2139.8455 2225.5703 2310.7995 2418.184 2037.1062 2432.6649 29609423 Catechol Organic Remediation Aromatics Other aromatics Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 976.7429 1921.5136 1493.6414 1509.0152 1021.7673 2174.734 1517.362 1262.6814 2071.5886 2094.2341 867.9368 2153.4794 170775583 fnr Stress Oxygen stress Leptothrix cholodnii SP-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Leptothrix;species:Leptothrix cholodnii; 5106.2609 4688.7761 5384.0442 3383.2065 4674.6441 3706.8262 4137.8617 8302.3326 7102.1352 4077.5296 33572.4822 4296.4399 227855875 gdh Nitrogen Ammonification Lactobacillus plantarum subsp. plantarum ATCC 14917 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus plantarum; 506.5751 598.9243 717.6463 715.8385 149190072 endochitinase Carbon cycling Carbon degradation Chitin Vibrio shilonii AK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio shilonii; 2332.3572 4794.9047 5328.2853 3491.3484 4666.8139 2948.4975 2598.2933 4171.2291 3918.3411 4128.7612 2598.1888 5004.2875 212709430 gdh Nitrogen Ammonification Providencia alcalifaciens DSM 30120 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia alcalifaciens; 774.56 686.5561 903.3819 811.8386 982.5021 700.2684 606.8095 783.7395 670.5943 578.3663 1503.1233 676.0984 71916872 pstC Stress Phosphate limitation Thermobifida fusca YX superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiopsaceae;genus:Thermobifida;species:Thermobifida fusca; 1107.9765 2041.2554 1573.7539 1224.9423 2410.2689 1656.0649 1549.5131 1949.3689 1478.949 2233.0889 1523.8805 2446.2943 190685514 amyA Carbon cycling Carbon degradation Starch Cellvibrio japonicus Ueda107 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Cellvibrio;species:Cellvibrio japonicus; 2059.9368 1080.4728 1573.736 953.2665 583.3358 863.4214 1010.3194 591.7176 1026.5094 2167.8361 1324.2241 187724096 dehH Organic Remediation Chlorinated solvents Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 11710.4514 7227.2152 14090.5935 15520.6654 14251.0677 16705.9642 8031.245 6296.4151 17441.1914 14493.0465 16459.376 13695.9304 118168061 MSAD Organic Remediation Others Mycobacterium avium 104 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium avium; 2204.5086 2111.8874 1764.2415 2737.2997 1848.672 954.2197 1934.9164 1759.9795 1476.9528 116612264 TerC Metal Resistance Tellurium Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 4981.448 5433.9098 8838.3061 1809.58 1242.6459 5911.4877 5586.6776 8603.1238 6467.0584 5932.2545 1234.8966 7039.0233 134142929 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 5333.616 1549.3546 2559.1094 5729.0994 2614.5958 1669.7798 3241.7501 2481.7995 2200.8685 2873.831 3584.1105 2248.7957 16330430 pstC Stress Phosphate limitation Synechocystis sp. PCC 6803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechocystis; 1061.3127 1307.5901 1055.0723 1413.6394 1413.9832 1344.9891 716.5451 1170.471 977.7884 1148.9048 2055.6652 1561.7937 157285714 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 3534.6016 2466.2706 3022.192 3393.2467 3119.109 2840.6328 2562.9306 2105.8287 3127.3084 3296.0009 3315.4674 3596.5158 116633900 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1403.984 1617.7566 1438.2314 1394.7642 2705.1276 1479.8349 1931.3455 1035.7021 1231.7702 1102.0616 1769.0036 1234.854 91978293 phn Organic Remediation Herbicides related compound Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1527.7761 1469.5394 645.335 732.1591 860.638 680.3425 74057981 ferredoxin_oxidoreductase Bioleaching Electron transport Thiobacillus denitrificans ATCC 25259 719.5144 472.4951 496.5208 430.5132 331.1868 421.5222 704.6656 162568511 aoxB Metal Resistance Arsenic Pseudomonas sp. 73 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1744.1569 1548.8831 1247.2552 1486.4828 2180.2518 1762.8079 841.3469 1291.0417 887.8237 1026.5876 2541.6829 1455.8761 158312209 pimF Organic Remediation Aromatics Aromatic carboxylic acid Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 2628.0424 2390.8474 2716.5284 2681.6603 3616.5314 2717.5725 2080.1028 3229.6862 2714.773 2608.8288 4154.7909 3466.8412 169866011 protease_serine_fungi Fungi function carbon degradation Coprinopsis cinerea okayama7#130 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis;species:Coprinopsis cinerea; 1170.7859 2206.1823 3967.1568 1691.1923 1981.2525 1736.4848 2075.3656 3575.9047 2065.7292 2806.1623 1915.2174 3578.856 94555037 pstS Stress Phosphate limitation Deinococcus geothermalis DSM 11300 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus geothermalis; 1958.0394 3033.3398 4086.7877 2217.8347 5091.1093 3525.9897 3114.075 2780.4482 3097.2658 3013.9141 1928.527 2673.2488 94471197 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1554.8556 2482.8359 2231.4621 1619.6775 1327.7932 2714.7756 2223.8363 2299.4002 2868.2594 2980.0797 2889.8354 254420336 narI Stress Oxygen limitation Brevundimonas sp. BAL3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Brevundimonas; 1916.05 687.0531 1047.2791 1709.7525 891.2309 1455.8301 1343.1063 3348.5502 899.5309 1228.276 1027.4121 1206.1122 68536649 alkK Organic Remediation Others Corynebacterium jeikeium K411 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium jeikeium; 1122.9938 1138.1141 1592.3063 854.4242 958.5372 1310.455 993.5282 1350.2074 1215.5898 1219.6108 1053.4307 1497.3616 146306240 Mex Antibiotic resistance transporter Pseudomonas mendocina ymp superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas mendocina; 613.453 1577.8724 1241.9483 1011.2472 1313.9527 1529.7291 1327.2315 1045.0587 1637.1066 1691.1476 592.5668 1558.2371 126464359 ChrA Metal Resistance Chromium Rhodobacter sphaeroides ATCC 17029 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 1272.6564 983.3685 1255.3392 1406.6399 802.178 1945.8131 1653.4563 1180.4571 1203.207 1525.5492 1526.4993 960.8936 87307584 linB Organic Remediation Pesticides related compound Blastopirellula marina DSM 3645 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Blastopirellula;species:Blastopirellula marina; 1380.773 2172.389 1141.3787 1314.5515 1313.2891 2013.3257 2811.5019 1189.7289 1642.4418 1478.0806 1993.7778 5981.4065 224610255 sigma_32 Stress Sigma factors Thioalkalivibrio sp. K90mix superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Thioalkalivibrio; 2370.6259 718.0048 884.6986 2623.5828 1274.4789 1102.7869 1425.497 1192.0288 883.1525 1231.6259 1178.0945 1278.2894 111116450 mdlD Organic Remediation Aromatics Other aromatics Pseudomonas putida superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1356.7023 1506.0617 1126.0686 1716.8478 1338.9603 1704.6579 1514.8615 1030.6062 1774.5174 1886.0357 1082.5245 1591.2084 42561627 pcpE Organic Remediation Herbicides related compound Sphingobium sp. UG30 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingobium; 3114.5602 2710.2396 3711.8434 2438.1457 2161.1406 2670.3106 2591.6635 2540.0413 2728.3906 2571.343 2655.2953 3541.3392 114545546 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Roseovarius sp. HTCC2601 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pelagibaca;species:Pelagibaca bermudensis; 2906.8566 3233.9713 3236.3441 5844.8982 6183.9559 3271.2393 3937.0524 2403.6906 3731.0844 2349.622 7037.8154 4429.7398 258552690 SMR_antibiotics Antibiotic resistance transporter Zymomonas mobilis subsp. mobilis NCIMB 11163 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Zymomonas;species:Zymomonas mobilis; 5206.0361 6734.8992 5020.906 5929.9188 17446.1171 7576.676 6944.4199 4571.7474 5529.3307 5305.8055 6915.9146 5165.6152 189500179 pstB Stress Phosphate limitation Chlorobium phaeobacteroides BS1 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium phaeobacteroides; 2518.1528 2348.2618 2805.0012 2500.0038 2465.5359 2411.7912 2661.4713 2011.1975 2062.9917 2098.589 3069.984 2313.1729 93006610 atzB Organic Remediation Herbicides related compound Psychrobacter cryohalolentis K5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Psychrobacter;species:Psychrobacter cryohalolentis; 2062.0054 773.403 1070.2225 1964.5538 991.0908 1101.9793 1331.9286 2177.256 919.9514 1038.6361 1057.0105 1224.9392 27922980 nitA Organic Remediation Aromatics Other aromatics Aspergillus oryzae superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus; 1181.5183 1495.1605 1277.2647 1664.7972 1682.6209 1137.5304 1135.564 547.8999 1613.8203 1538.4464 885.1625 849.8127 52548188 per_fun soil_benifit Phanerochaete chrysosporium superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Corticiales;family:Corticiaceae;genus:Phanerochaete; 1664.5571 1289.4447 1136.9442 1939.8709 970.823 1013.7372 888.8165 1046.6201 874.1245 1041.9302 1591.9903 1414.5143 81176587 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2236.9476 3552.7773 2948.5931 1927.6527 3923.619 2458.1108 2551.6439 2607.0061 2962.5575 2864.4176 1765.3279 1957.3952 153002217 nrfA Nitrogen Dissimilatory N reduction Shewanella baltica OS185 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella baltica; 3177.1547 1815.623 2235.1842 2659.3471 2541.9049 2270.2897 2859.1492 1539.9419 2540.2719 3141.5466 2993.826 2375.2706 148256204 nmoA Organic Remediation Aromatics Nitoaromatics Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 857.1283 512.0736 492.3522 740.2279 395.6665 449.0952 398.778 674.9952 268161526 proV Stress Osmotic stress Photobacterium damselae subsp. damselae CIP 102761 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Photobacterium;species:Photobacterium damselae; 18103.1875 1140.7773 1481.2246 1309.7208 1716.3688 1340.3077 1037.8491 1080.3789 913.9263 1223.519 2855.6845 1546.1938 255940312 ABC_multidrug_fungi Fungi function metal resistance Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 1034.072 1822.9245 1008.3569 971.36 2388.3706 1285.1041 1373.9804 1658.0433 1593.9706 1775.097 989.3196 120595227 pimF Organic Remediation Aromatics Aromatic carboxylic acid Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 4294.9636 4524.7412 4883.1008 5671.3917 4102.161 4989.3179 2720.9674 2522.5909 2724.9658 3457.4789 7088.8436 4360.927 218675453 ppx Phosphorus Phosphorus utilization Rhizobium etli GR56 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 1581.8948 1476.9004 1141.2624 1842.3308 1213.5999 1267.8296 1379.8569 820.0766 1285.9028 1287.3576 1257.712 1084.0728 51469810 nitA Organic Remediation Aromatics Other aromatics Alcaligenes faecalis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Alcaligenes; 852.4136 2098.941 1647.8035 1076.2556 1129.8366 1111.5962 1551.0615 1637.4781 1476.9803 2181.7567 1174.2265 1633.9847 26278782 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3251.1734 2163.7879 2502.1146 2638.1844 2529.1926 2040.4341 2275.4466 2442.2307 1928.4523 2154.7674 3226.1559 2613.6024 126224625 tfdA Organic Remediation Aromatics Chlorinated aromatics Burkholderia pseudomallei 668 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia pseudomallei; 463.4277 1445.0058 632.6005 541.9837 1039.6461 710.0946 964.1644 523.6458 940.4303 452.967 620.7957 524.2444 260862328 obgE Stress Radiation stress Selenomonas sputigena ATCC 35185 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Veillonellaceae;genus:Selenomonas;species:Selenomonas sputigena; 1194.4805 687.6902 1119.7149 1208.4778 1274.7886 1206.0601 924.2365 1654.3272 1102.665 1141.2111 1353.426 622.968 86282167 xylanase Carbon cycling Carbon degradation Hemicellulose Rhizobium etli CFN 42 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 8398.5842 6164.1474 9857.9021 5702.5536 7397.5368 5704.059 5764.2482 11621.8083 6084.787 5967.4846 10726.2647 10869.7581 221725734 MFS_antibiotic Antibiotic resistance transporter Agrobacterium radiobacter K84 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 2072.4423 3350.5912 1517.457 2534.9735 1253.4149 3438.7198 2253.5212 1410.2083 2315.9716 2338.5337 2928.2723 167629410 BchY other category chlorophyllide reductase Heliobacterium modesticaldum Ice1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Heliobacteriaceae;genus:Heliobacterium;species:Heliobacterium modesticaldum; 690.1649 544.2869 702.6693 901.6058 544.8405 513.9744 635.2035 810.4969 154244158 pstB Stress Phosphate limitation Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 7225.9715 8019.4125 9136.9471 8868.2981 5766.903 9415.7909 7116.1981 8250.0664 9774.1332 8977.3006 7398.5929 9552.0706 115422029 pstB Stress Phosphate limitation Bordetella avium 197N superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella avium; 2755.4074 1779.587 2038.3486 2444.022 2713.4129 2128.19 1786.4191 1602.7267 1798.3511 2051.6229 2903.7097 2974.7425 219945090 SmtA Metal Resistance Miscellaneous Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 1167.8308 682.555 1019.0822 1210.9835 695.587 1699.796 723.5127 714.8603 650.0884 946.8729 117927778 adpB Organic Remediation Pesticides related compound Acidothermus cellulolyticus 11B superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Acidothermaceae;genus:Acidothermus;species:Acidothermus cellulolyticus; 720.2129 617.2366 605.9785 603.481 428.3449 325.2392 515.4483 413.8052 378.4086 809.4849 549.1429 257146939 cydB Stress Oxygen limitation Lactobacillus rhamnosus GG superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus rhamnosus; 1828.27 777.4233 793.0126 1613.2945 906.1331 697.2173 1120.8248 950.0765 508.308 1617.6246 694.6234 91688336 bclA Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 1401.6334 3429.7097 2114.4338 1258.6656 2546.6069 2057.4617 3397.2406 1694.7676 1680.6619 1230.1184 1933.1637 2013.5193 124509798 hly virulence hemolysin Shewanella putrefaciens 200 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella putrefaciens; 3369.5724 2808.9561 3564.7475 2978.4857 4294.1831 3457.9536 2591.1015 2584.6011 2556.1145 2658.7986 6009.7305 3203.4273 148845765 sigma_24 Stress Sigma factors Planctomyces maris DSM 8797 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Planctomyces;species:Planctomyces maris; 504.4528 809.7404 594.6087 696.1929 777.1538 759.8941 929.8996 932.5214 925.8624 71908750 fccAB Sulphur sulfide oxidation Dechloromonas aromatica RCB superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Dechloromonas;species:Dechloromonas aromatica; 1287.714 665.9278 775.2069 983.1935 1438.8107 380.8259 591.5315 169157853 pat1 soil_borne_pathogen enzyme protease Clavibacter michiganensis subsp. sepedonicus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Clavibacter;species:Clavibacter michiganensis; 1949.6174 1429.0266 1988.7399 6136.0436 1607.143 1948.1462 1944.7197 1838.99 1035.8118 1605.4898 2603.1859 1713.3989 167648651 nitA Organic Remediation Aromatics Other aromatics Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 3915.7699 1342.8614 1867.9459 2899.6838 2678.6601 1351.51 1682.2236 1644.6438 2197.5019 1789.0439 3230.9007 1644.8195 124874701 nagG Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia cenocepacia PC184 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia cenocepacia; 1342.2895 859.3707 884.0298 1268.5278 533.6531 1122.26 1511.7301 1237.674 951.4036 927.9543 939.0737 2309.0944 70985709 lactase_fungi Fungi function carbon degradation Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 3057.2715 2046.3779 2451.6626 2921.5588 1536.9358 1707.9034 1846.0643 1379.2092 1575.9264 2347.0872 1674.3707 1404.1876 189204386 RgaE_fungi Fungi function carbon degradation Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 1416.973 3005.7267 2600.7796 1822.9625 1838.0132 1948.3556 2532.7868 3598.8786 2181.706 3343.8827 1497.4535 2407.1159 126355270 ureC Nitrogen Ammonification Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1133.0949 1171.821 1386.4999 1155.6739 2548.6356 998.392 1903.209 651.1166 1129.7837 1339.2035 1179.5839 1011.6175 37548698 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 1638.5791 1488.254 1988.8562 1328.3997 1561.4315 1902.5595 1578.1083 2165.297 2512.5707 2065.045 1569.5033 1719.9904 160863276 dsrA Sulphur sulfite reductase Desulfovibrio vulgaris str. 'Miyazaki F' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 3742.5604 9328.6718 18863.5708 7013.7354 5891.9159 11368.1996 7778.2137 8837.2325 9470.3872 12063.4552 4969.9697 10720.8308 110825138 CDH Carbon cycling Carbon degradation Cellulose Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1268.385 1051.8215 415.6852 1060.4898 886.5289 387.2454 707.9577 625.8998 832.1767 648.8154 1104.7954 1116.9618 229590264 cytochrome Energy process Energy process Pseudomonas fluorescens SBW25 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 913.3425 1286.0169 1111.8635 1008.2748 1424.2024 891.3798 1744.3922 842.0216 1018.35 687.161 1047.5928 723.713 256363033 sod_nickel soil_benifit Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 3563.8303 2566.1213 2377.1187 3810.2953 910.132 3337.2264 4263.8507 4185.9358 2689.6346 4066.5753 1540.3134 2235.3654 125716454 phenol_oxidase Carbon cycling Carbon degradation Lignin Ensifer adhaerens superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Ensifer; 805.5214 1426.8349 866.8616 1075.1573 964.187 907.7653 2031.2099 1120.0918 1196.0607 1550.5719 1297.6245 99083199 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 489.0162 767.5351 648.8027 567.2487 1053.0126 676.615 869.3324 1006.7669 735.8206 499.9554 653.337 238496875 grpE Stress Heat shock Aspergillus flavus NRRL3357 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus flavus; 5843.1299 5319.0994 4411.9487 4721.9204 4211.4437 3459.1202 2848.6196 3616.1635 3607.5125 2989.2697 8417.5003 3602.4345 13365755 MFS_antibiotic Antibiotic resistance transporter Kitasatospora griseola superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Kitasatospora; 1971.7672 1803.7979 4180.6401 1896.6689 2428.8492 1539.6302 1830.4992 4197.4349 1861.7913 2122.8091 2719.3208 3660.7969 12381893 katA Stress Oxygen stress Bacillus subtilis superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 617.0663 666.0024 357.5417 595.5616 522.5727 624.313 459.588 452.364 389.5992 158334948 rubisco Carbon cycling Carbon fixation Acaryochloris marina MBIC11017 superkingdom:Bacteria;phylum:Cyanobacteria;genus:Acaryochloris;species:Acaryochloris marina; 1027.9468 482.0138 808.5104 390.092 446.6985 335.8495 371.7757 880.9101 261373962 gyrB other category gyrB Geobacillus sp. Y412MC61 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 1190.3433 451.1768 588.3131 1019.9314 811.9769 1287.1775 1195.5269 903.3517 845.4677 756.982 2190573 bclA Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 825.7102 659.5037 1153.1266 689.5297 717.8298 1215.511 837.5003 790.4171 712.0885 99035845 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Silicibacter sp. TM1040 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 1245.5501 645.5251 892.1719 1353.5072 950.9724 968.3 771.1893 569.1671 898.5407 1151.7858 1347.0115 937.4662 154154805 phoB Stress Phosphate limitation Parvibaculum lavamentivorans DS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Parvibaculum;species:Parvibaculum lavamentivorans; 1091.898 539.0865 1278.1516 1188.9589 600.3604 567.7763 1202.7047 765.44 515.4098 721.0263 1316.74 160890884 ara Carbon cycling Carbon degradation Hemicellulose Bacteroides uniformis ATCC 8492 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides uniformis; 3678.5622 2141.826 2300.2702 2786.9052 1503.5481 2002.8114 3134.4232 2968.3429 2580.3209 1975.881 1506.4988 2469.9071 119391489 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 4207.1567 3443.9432 2749.8965 4488.5693 1698.3004 3362.9512 4741.1268 3244.9497 3109.8932 3743.6974 3171.3918 2087.6466 126648529 catB Organic Remediation Aromatics BTEX and related aromatics Algoriphagus sp. PR1 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cyclobacteriaceae;genus:Algoriphagus; 600.2257 1874.7484 1192.3832 1136.5521 1938.4695 1521.1013 1103.946 1952.4666 1759.0285 1582.0627 219863545 sigma_70 Stress Sigma factors Cyanothece sp. PCC 7425 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 1360.497 1014.8362 1407.4731 1230.0788 760.3029 926.2897 2200.8594 1001.9833 899.9488 1796.4157 1188.013 56409824 gyrB other category gyrB Vibrio aestuarianus superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 434.8866 1055.6188 1099.6795 1312.7772 656.6809 710.9706 605.447 626.7011 707.3276 219925267 per_fun soil_benifit Yarrowia lipolytica superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Dipodascaceae;genus:Yarrowia; 2153.1435 2860.8693 1879.97 2405.6141 2229.6035 2589.9804 2767.9609 1721.3849 3465.9779 2737.7454 2397.199 2551.6214 262201611 hly virulence hemolysin Gordonia bronchialis DSM 43247 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Gordoniaceae;genus:Gordonia;species:Gordonia bronchialis; 1948.8383 2007.3347 3012.4796 2392.7384 4536.1827 1880.5588 3288.7896 1882.2991 1990.6285 1839.3822 1652.8206 2048.6742 190014188 silC Metal Resistance Silver Stenotrophomonas maltophilia K279a superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 10637.3183 6453.2887 8982.1307 10030.0811 8892.6479 8656.7892 8087.4625 4674.9363 8094.3799 7988.5115 8191.4288 7546.7769 115371535 phenol_oxidase Carbon cycling Carbon degradation Lignin Coprinopsis cinerea okayama7#130 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis;species:Coprinopsis cinerea; 3902.492 3441.4775 3708.6811 3660.4992 4421.5153 3906.5525 3853.5033 3306.7481 3329.4873 3643.6739 4932.8036 4676.9632 299739084 cat_fun soil_benifit Coprinopsis cinerea okayama7#130 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis;species:Coprinopsis cinerea; 729.2797 902.0837 966.922 1970.7868 772.6418 1468.258 529.0535 728.2566 538.9449 806.3378 537.9767 206591554 silC Metal Resistance Silver Ralstonia solanacearum superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 1620.2709 2719.3123 1838.5906 1554.6691 3408.2799 2406.8406 2134.8617 2222.5865 2734.5645 2568.3281 2179.5022 112463999 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 3708.805 2731.4304 2935.0569 1686.4941 913.5083 3138.3377 2294.4814 2931.5943 2762.8481 2649.5528 1276.9317 2947.7173 119944251 pilin virulence pilin Psychromonas ingrahamii 37 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Psychromonadaceae;genus:Psychromonas;species:Psychromonas ingrahamii; 1493.5237 1565.8307 1586.9849 1649.5244 1842.6962 1643.3072 1324.3754 2096.7747 1149.4471 1412.0757 2698.0831 2172.7459 254500347 sigma_24 Stress Sigma factors Labrenzia alexandrii DFL-11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia alexandrii; 677.4176 673.1977 922.9118 841.7261 593.2368 928.687 483.7983 736.3992 966.378 846.8191 735.3099 262171059 exochitinase Carbon cycling Carbon degradation Chitin Vibrio mimicus MB-451 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio mimicus; 997.5496 647.0032 478.5542 949.6631 1063.6314 1881.7711 643.3125 857.1702 668.5983 78219719 narI Stress Oxygen limitation Desulfovibrio desulfuricans subsp. desulfuricans str. G20 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio desulfuricans; 1077.9284 1172.4425 1189.0682 1192.1641 15147.012 1398.1287 1416.7337 1229.3099 1163.321 1119.6711 1019.1958 574.3947 81296315 Xamo Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 2884.8142 5704.8675 4511.646 3082.217 6345.1119 3856.9126 4501.1926 4429.2317 4441.7278 4258.3814 3481.117 3454.6607 26278888 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3450.3475 1914.0975 2093.9913 3667.0397 2284.3396 2024.1242 2435.0376 2635.1667 2150.3994 2474.3792 3697.5547 1937.8129 161163133 pilin virulence pilin Sorangium cellulosum 'So ce 56' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Polyangiaceae;genus:Sorangium;species:Sorangium cellulosum; 2693.5585 4773.1701 3000.1429 3042.9736 3364.1741 3310.3276 3221.9295 3451.2186 3794.3789 3714.2961 2952.6357 3141.3777 146410922 exaA Organic Remediation Chlorinated solvents Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 3484.8349 1763.6971 1910.9391 2780.3647 1996.1357 1765.2308 1913.5437 2127.2291 2148.5065 2054.7161 4566.1882 2212.2402 218548839 nahA Organic Remediation Aromatics Polycyclic aromatics Escherichia fergusonii ATCC 35469 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia;species:Escherichia fergusonii; 1071.4944 683.1377 984.3315 490.9374 651.6903 910.0135 1296.1739 615.6175 596.5861 118474039 pcpE Organic Remediation Herbicides related compound Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 1138.038 1348.0477 1845.4824 1358.4048 865.7613 1333.1283 1540.001 1304.621 1371.5458 239906748 sigma_32 Stress Sigma factors Desulfovibrio magneticus RS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio magneticus; 3336.1932 1473.2561 2019.0257 3257.9906 3186.3396 1584.3719 2306.8348 1738.113 1623.8093 2278.6983 2162.4545 1815.2105 166027439 sigma_24 Stress Sigma factors Dorea formicigenerans ATCC 27755 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Dorea;species:Dorea formicigenerans; 435.5691 374.8487 739.0806 582.1943 280.6512 381.4793 110340821 pstB Stress Phosphate limitation Chlorobium ferrooxidans DSM 13031 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium ferrooxidans; 2287.1038 2292.2965 2655.1572 2282.0487 1721.0518 2651.7199 2702.4659 2227.6219 2319.2566 2370.7377 2322.074 2043.2087 74422173 ArsC Metal Resistance Arsenic Nitrobacter winogradskyi Nb-255 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter winogradskyi; 2242.6832 1567.2324 1693.443 1272.6096 801.4561 1937.632 1359.4629 1905.0915 1678.3671 1611.7765 1212.8341 1410.7791 186476806 SMR_antibiotics Antibiotic resistance transporter Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 797.3277 401.262 885.4765 608.5644 552.2726 413.18 647.4866 56550904 sir Sulphur sulfite reductase Zymomonas mobilis subsp. mobilis ZM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Zymomonas;species:Zymomonas mobilis; 1438.814 485.8239 695.0601 1474.8673 702.9437 610.2165 474.9362 746.6642 568.1286 674.6099 745.9879 985.2411 197707358 ureC Nitrogen Ammonification Streptomyces clavuligerus ATCC 27064 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces clavuligerus; 1890.1391 3775.7211 3164.8825 2709.5759 1718.0373 3692.9916 3593.0373 3123.6649 4345.1464 4113.3627 26946.6012 4060.8889 120562256 tutFDG Organic Remediation Aromatics BTEX and related aromatics Desulfovibrio vulgaris subsp. vulgaris DP4 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 614.8365 1623.3761 1582.2014 933.6507 1099.3118 787.5533 872.7352 1566.9223 996.0307 1238.1918 896.3339 1215.2854 218887324 fnr Stress Oxygen stress Desulfovibrio vulgaris str. 'Miyazaki F' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 4606.8481 6589.4557 7668.4736 8159.9306 6533.9679 8136.8637 7563.8581 6956.3738 6657.2273 7659.4251 8750.8417 6416.7145 193226173 ChrA Metal Resistance Chromium Cupriavidus taiwanensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus; 9877.1309 8619.1026 12261.4681 9831.7683 4912.2261 9535.6655 8972.3906 12479.275 8403.4961 9122.5091 4244.2184 8940.7202 37527650 yopT soil_borne_pathogen enzyme protease Photorhabdus luminescens subsp. laumondii TTO1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Photorhabdus;species:Photorhabdus luminescens; 1782.5867 1467.8659 1972.6883 1568.9556 2120.4345 1128.5566 1086.6722 1630.9297 1132.428 1299.0377 2820.5125 1657.7554 78060158 catB Organic Remediation Aromatics BTEX and related aromatics Burkholderia sp. 383 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1514.4109 916.5847 1667.4173 867.9574 995.0533 1065.2167 25336.8967 1975.7925 1222.9519 1079.5947 686.0705 1535.9632 119860575 nitA Organic Remediation Aromatics Other aromatics Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 9672.0063 8876.6169 10010.6539 11780.7343 3291.9062 14618.3655 10159.5247 6794.5881 11247.3742 11210.1439 9389.9442 8966.8528 157323029 akbF Organic Remediation Aromatics BTEX and related aromatics Serratia proteamaculans 568 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Serratia;species:Serratia proteamaculans; 2642.3075 1995.5861 2182.9874 3152.4032 2563.898 2486.6474 2238.6329 2593.0257 1793.4353 2689.4952 2715.5009 2741.7595 251775759 pstB Stress Phosphate limitation Geobacter sp. M21 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 1690.9919 3895.8579 2643.0604 2191.0835 3159.6824 3088.2491 3014.8805 4223.677 2994.9066 3676.7992 1909.1632 3488.8817 148260124 NADH_ubiquinone_oxidoreductase Bioleaching Electron transport Acidiphilium cryptum JF-5 3256.3247 4671.9687 4349.5889 4958.0794 2446.766 5411.6636 7611.7119 3547.5444 5592.0719 4246.3998 4418.2447 3056.3951 151582326 cellobiase Carbon cycling Carbon degradation Cellulose Opitutaceae bacterium TAV2 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae; 2705.6005 2951.3669 4070.3581 2607.2828 3450.8061 2308.6376 3101.0449 4621.145 2793.38 3775.7898 2257.7842 4276.4181 83025966 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 872.7635 502.3697 680.5134 560.5615 484.0133 665.8442 1099.4379 617.1983 256680835 B_lactamase_A Antibiotic resistance Beta-lactamases Streptomyces sp. SPB78 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 16693.6725 16145.6968 6300.308 14037.8125 11731.2316 11703.0261 9216.5573 10342.5683 12795.413 10246.6468 19572.2438 10167.4446 121495550 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 771.3094 814.9374 1038.381 979.6607 1232.9955 1173.3956 561.3988 672.5739 590.0303 896.0182 1831.2033 906.4311 145701954 NADH_ubiquinone_oxidoreductase Bioleaching Electron transport Metallosphaera sedula DSM 5348 650.2172 450.9208 504.42 590.4446 581.0519 701.5097 665.4567 646.1987 540.6388 741.8877 389.3382 89513030 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 3240.4049 2452.8295 2710.2134 2743.6317 3130.5589 2634.7445 2215.755 2845.6407 2201.4975 2414.0108 3929.636 3030.7468 91720252 FTHFS Carbon cycling Acetogenesis Psychrobacter sp. PRwf-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Psychrobacter; 5460.8333 2395.7406 3120.0282 4210.6465 1849.0287 3311.6063 2800.089 2480.2986 5336.2147 3716.5517 3892.1299 3468.8874 160917443 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1386.1862 2551.1615 1732.1907 1786.1983 998.8831 3166.7995 2099.3155 2143.0615 2541.1922 2510.5752 958.8939 2250.3612 159041230 cellobiase Carbon cycling Carbon degradation Cellulose Caldivirga maquilingensis IC-167 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Thermoproteales;family:Thermoproteaceae;genus:Caldivirga;species:Caldivirga maquilingensis; 5833.0691 4027.5649 4975.252 5729.1815 969.4373 2946.1793 3270.4945 3432.4933 3415.4914 2398.2742 2763.5501 2572.7555 83816436 phoA Stress Phosphate limitation Salinibacter ruber DSM 13855 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Rhodothermaceae;genus:Salinibacter;species:Salinibacter ruber; 7442.0837 10415.3697 8522.6248 7271.742 12941.5704 7606.5287 7678.2392 8762.295 8031.6504 8605.1787 4326.4467 5722.0911 146402525 PobA Organic Remediation Aromatics Aromatic carboxylic acid Acidiphilium cryptum JF-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Acidiphilium;species:Acidiphilium cryptum; 1116.0896 1251.0513 1178.0618 1381.2036 1611.0865 1732.7308 845.2411 916.4145 1406.2712 1252.0382 1056.0975 1507.7981 13676306 cellobiase Carbon cycling Carbon degradation Cellulose Actinomyces naeslundii superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Actinomyces; 1864.1342 1470.8094 3132.5467 1604.939 1822.3526 1152.6362 1211.1299 3697.6979 1734.8295 1856.4781 2109.192 2734.6324 95134900 sigma_70 Stress Sigma factors Desulfuromonas acetoxidans DSM 684 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Desulfuromonadaceae;genus:Desulfuromonas;species:Desulfuromonas acetoxidans; 1463.6771 3668.6836 2867.0266 1997.9484 2855.6853 3558.3252 3228.3759 3523.8442 4457.6053 4054.5937 1374.1352 4470.827 221197030 akbF Organic Remediation Aromatics BTEX and related aromatics Burkholderia multivorans CGD2M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 2128.0722 3304.4759 3193.1037 2262.6462 2392.6744 3338.7071 2719.3515 867.6343 1997.7984 1849.5604 3076.855 2013.9726 190687208 norB Nitrogen Denitrification Cellvibrio japonicus Ueda107 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Cellvibrio;species:Cellvibrio japonicus; 829.1488 2141.9609 784.7397 647.0163 861.0559 1051.6708 975.8343 560.7276 900.6858 543.4284 260424481 sid_bac soil_benifit Cronobacter turicensis z3032 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Cronobacter;species:Cronobacter turicensis; 3422.5225 3973.1797 2943.0536 2923.9832 4245.6088 3225.5478 2896.3472 2917.0934 3892.8066 2802.723 3768.5473 2829.6328 254430393 sigma_70 Stress Sigma factors Cyanobium sp. PCC 7001 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanobium; 3310.7926 3198.3049 3363.6373 3311.6506 5407.7398 2723.0415 3706.1567 2642.98 3095.5767 3066.91 4207.0925 3568.2409 229360429 iro virulence Iron oxidation Pseudomonas fluorescens SBW25 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 873.9456 1126.8114 1113.4193 687.8349 889.0869 1110.6839 1152.1958 969.988 1632.9945 1403.1202 1354.092 169242064 mer Metal Resistance Mercury Mycobacterium abscessus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 2049.1507 992.6578 1471.7013 1691.4937 1557.9217 2701.9383 2140.2169 931.449 1879.7155 704.113 1085.8443 187728904 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 632.9567 1353.3868 1022.5911 767.2943 867.266 1334.8188 928.4576 1064.9702 1399.3401 1595.4176 1265.1613 148658661 SMR_antibiotics Antibiotic resistance transporter Roseiflexus sp. RS-1 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus; 5921.5074 9231.9303 6571.7602 8335.889 9387.9657 8863.9936 7953.5591 6061.9286 8361.9443 8612.9059 4862.3635 9525.8281 159044397 scnABC Organic Remediation Others Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 2947.0057 5417.217 4925.2798 3480.363 2584.3553 4850.713 4716.7067 3919.4603 4924.9373 5847.624 2499.4236 5038.9205 211585111 chnB Organic Remediation Other Hydrocarbons Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 9089.782 5518.2283 9223.5588 8378.7908 6143.7048 8020.6545 8884.1332 3903.8821 6553.6082 7268.7205 6695.7164 8109.9545 237901989 hmgB_fungi Fungi function carbon degradation Uncinocarpus reesii 1704 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Onygenaceae;genus:Uncinocarpus;species:Uncinocarpus reesii; 953.5454 1080.3011 978.195 891.1535 658.715 748.0653 970.0122 897.7386 28897733 CopA Metal Resistance Copper Vibrio parahaemolyticus RIMD 2210633 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio parahaemolyticus; 825.7955 971.1356 534.7917 1242.3804 782.3485 800.3695 503.5995 537.0912 923.4096 82699197 ureC Nitrogen Ammonification Brucella melitensis biovar Abortus 2308 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Brucella;species:Brucella abortus; 745.2642 1292.4137 1013.3876 576.159 602.2107 1203.9363 1250.6907 959.0699 1253.2974 1146.839 819.5512 1069.489 117985945 silC Metal Resistance Silver Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 2409.0691 4042.1169 4274.2307 2079.7774 2850.0922 4014.2976 3598.8986 4036.2423 5388.1456 4644.3609 820.4642 4870.5482 61394085 holin_type1 Bacteria phage LYSIS Enterobacteria phage PR772 superkingdom:Viruses;family:Tectiviridae;genus:Tectivirus;species:Enterobacteria phage PRD1; 3542.9968 1950.5921 4278.2436 3416.3271 3403.1356 3185.8987 2882.3076 2571.7585 1926.9903 3017.5208 3646.5024 3597.9028 86553911 clpC Stress Protein stress Synechococcus sp. JA-3-3Ab superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 28804.6078 35981.3317 33748.0507 26979.7271 35156.155 35146.7531 24518.8389 47223.4959 32530.9594 29689.2668 43225.0185 17168.4431 262206457 amoA Nitrogen Nitrification Archaea superkingdom:Archaea;phylum:Crenarchaeota; 1391.7741 1388.2887 1932.0795 1682.0698 2136.8345 1607.8309 1523.4183 1550.2184 1296.5266 1345.948 2893.307 1676.5687 238921111 sigma_38 Stress Sigma factors Edwardsiella ictaluri 93-146 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Edwardsiella;species:Edwardsiella ictaluri; 2933.4257 3188.7225 3508.7414 3227.1917 1593.1129 3304.5021 1964.9876 3167.4097 2708.7971 2374.0318 2765.1598 2674.5534 146402865 glycosyl_transferase_EPS Bioleaching EPS Acidiphilium cryptum JF-5 1120.7909 567.4005 745.2795 1106.7463 1044.4998 530.376 702.735 436.6277 807.3295 1057.9988 882.2795 725.9331 71915395 pimF Organic Remediation Aromatics Aromatic carboxylic acid Thermobifida fusca YX superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiopsaceae;genus:Thermobifida;species:Thermobifida fusca; 1588.4497 2762.1782 1597.8022 1895.6279 2230.4187 1706.5124 3207.2248 2224.1359 1924.2761 1690.031 1886.6281 2387.9044 89360675 phn Organic Remediation Herbicides related compound Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 2280.522 4394.4741 3353.576 3907.9449 2519.7033 4666.6011 4321.5803 2654.5759 4643.697 4546.3976 2092.1105 4807.5692 72121761 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 1772.0289 1079.6385 1557.2298 1339.2892 1261.9846 956.6341 1077.4329 2326.5864 1032.7481 1237.7954 2392.9947 1518.8664 151358495 gyrB other category gyrB Kineococcus radiotolerans SRS30216 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Kineosporiaceae;genus:Kineococcus;species:Kineococcus radiotolerans; 1932.7464 1929.6137 1238.4298 904.8722 2934.8603 1408.8973 1873.9255 1459.0692 1530.6586 2156.3419 1558.2838 1742.7037 39935125 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 22334.2434 21970.8157 15673.3474 16447.166 22800.965 18071.907 28397.1408 13253.6216 21563.1131 16719.8153 16383.7946 17588.955 259034095 rubisco Carbon cycling Carbon fixation Mesorhizobium opportunistum WSM2075 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium opportunistum; 2939.2284 1388.8238 2024.6088 2764.2564 1529.4441 1739.0374 1662.2539 2316.552 1806.3656 2175.8162 2869.4025 2033.3763 109452396 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 810.7869 626.6916 912.6871 896.4756 893.5629 799.1892 1631.8808 563.6112 545.9856 722.112 672.1363 648.6338 197703172 AceB Carbon cycling Carbon degradation Others Streptomyces clavuligerus ATCC 27064 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces clavuligerus; 4347.3227 2447.5136 3620.361 4172.814 6037.4176 3023.1743 2929.5191 2719.1522 2941.0186 2974.0163 3981.5735 3879.0726 226364401 clpC Stress Protein stress Rhodococcus opacus B4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus opacus; 2889.7035 2200.6011 2980.2892 3076.5463 803.8085 2271.6208 1571.0197 2259.8193 2072.3691 2094.4463 2148.0398 2020.6464 121555369 tfdA Organic Remediation Aromatics Chlorinated aromatics Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 626.0525 1886.1785 1608.7214 957.1556 2028.5512 1414.0038 1348.3191 2184.4318 1974.0831 1776.8423 58422745 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 526.8446 445.5828 609.7444 635.6742 482.7107 799.0734 2133.027 927.0895 419.5792 1197.0723 39944266 sir Sulphur sulfite reductase Magnaporthe oryzae 70-15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe;species:Magnaporthe oryzae; 1279.1039 1000.1059 1071.0076 1181.1582 1278.0433 998.0032 1314.4308 1066.229 903.8119 991.2792 1364.4774 671.4409 33573811 bphA Organic Remediation Aromatics Polycyclic aromatics Bordetella parapertussis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella; 1587.5632 712.7948 1241.4394 1509.3577 835.223 804.4539 1287.3381 966.1872 1241.7766 1408.7704 796.7999 1056.0725 29893077 alkJ Organic Remediation Other Hydrocarbons Rhodococcus ruber superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 1048.9012 1069.6611 662.4647 946.0333 1574.4946 879.2951 750.3479 897.8344 558.9726 765.7281 1521.6944 791.8732 33320448 dsrB Sulphur sulfite reductase Desulfacinum infernum superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Syntrophobacterales;family:Syntrophobacteraceae;genus:Desulfacinum; 3968.814 1157.6611 1990.2084 3126.9121 2240.9034 1827.3593 2413.313 2799.3551 1629.9075 2150.1222 1827.1672 2093.6476 164603813 CadA Metal Resistance Cadmium Clostridium bartlettii DSM 16795 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium bartlettii; 588.9693 508.3642 464.4193 605.0356 209874022 pstB Stress Phosphate limitation Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 1684.7593 2277.1838 1526.2098 1647.7027 2794.1047 1430.7035 1606.176 1754.0664 1904.671 1882.9091 56677633 sox Sulphur Sulphur oxidation Silicibacter pomeroyi DSS-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria pomeroyi; 2583.1382 3191.9846 3038.6652 3926.8064 2660.9708 2865.8641 2606.3913 2704.3124 2367.192 2986.8131 3177.2298 2974.445 160361132 akbF Organic Remediation Aromatics BTEX and related aromatics Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 444.6788 1443.0179 1090.5777 560.2005 1484.2662 979.6369 778.1058 976.028 930.9015 937.8589 1210.1632 169817213 silC Metal Resistance Silver Burkholderia cenocepacia MC0-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia cenocepacia; 2151.3167 1192.6904 1457.9178 1928.9676 1620.9645 1177.1795 1179.7703 1389.0379 1216.149 1512.3504 1728.8825 2030.52 110833027 phoB Stress Phosphate limitation Alcanivorax borkumensis SK2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax;species:Alcanivorax borkumensis; 845.684 1775.879 949.2394 678.0549 1972.1519 1061.3281 2046.2771 710.3877 1138.6719 869.6431 1222.9484 933.0719 114705959 pcaG Organic Remediation Aromatics Other aromatics Fulvimarina pelagi HTCC2506 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Fulvimarina;species:Fulvimarina pelagi; 2124.6536 1658.6984 2222.2731 2038.8218 1447.1814 1966.9313 1589.3033 2401.1851 1799.6325 1710.8229 2234.7446 1909.4281 89358829 nmoA Organic Remediation Aromatics Nitoaromatics Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 5744.9667 3856.8911 6178.7143 4660.802 3257.3493 5658.906 4259.6067 5786.2054 4947.1518 4784.6338 3451.2064 5825.4545 158331685 nmoA Organic Remediation Aromatics Nitoaromatics Azorhizobium caulinodans ORS 571 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Azorhizobium;species:Azorhizobium caulinodans; 5500.9959 3945.1843 4201.3588 4890.7561 5496.1608 3443.2665 5557.9103 3401.0948 4511.2836 3805.8498 4256.3189 3915.6281 94497023 ArsC Metal Resistance Arsenic Sphingomonas sp. SKA58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 2220.7751 4272.617 3428.4252 2075.8873 5015.0816 3785.7954 3034.4028 2907.6641 3058.7078 3066.9212 2883.9454 2844.1067 239821735 fnr Stress Oxygen stress Ochrobactrum intermedium LMG 3301 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum;species:Ochrobactrum intermedium; 8675.3164 3107.6926 5464.1422 4271.6827 5155.2494 5133.0279 4582.0921 9159.3393 5085.0403 4680.3838 6647.9922 4830.9029 183600981 TerD Metal Resistance Tellurium Providencia stuartii ATCC 25827 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia stuartii; 2207.2623 1026.5912 1058.7944 1729.8193 1896.1052 1161.3857 1798.4399 1083.5503 1076.0472 1138.654 1567.6774 1383.2869 227989465 ahpC Stress Oxygen stress Meiothermus silvanus DSM 9946 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Meiothermus;species:Meiothermus silvanus; 1912.5845 1179.3745 1157.3213 1596.7753 1853.6927 1308.1218 1140.6682 1279.9724 941.6476 912.5502 2344.8013 1669.8399 118591791 glnA Stress Nitrogen limitation Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 855.4493 710.0152 662.2321 1161.7145 704.1869 651.7498 563.3723 574.4906 654.5661 549.1841 111222753 CDH Carbon cycling Carbon degradation Cellulose Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 5388.4466 3251.9511 5551.0447 3186.6059 3571.5973 3547.3174 3453.2267 7496.3817 3720.4023 3610.37 6008.6494 4833.0863 27349176 Catechol Organic Remediation Aromatics Other aromatics Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 2661.4149 1662.158 2784.3479 2416.0516 1527.4371 1452.45 1610.8157 2116.771 1950.5911 2100.666 2374.2675 2189.2728 157911273 tftH Organic Remediation Aromatics Chlorinated aromatics Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 4768.6536 3605.2639 3917.5481 5773.904 2599.1627 4615.7797 5044.1588 4779.2268 3670.9992 5224.2011 4249.1355 3564.7941 53757661 catB Organic Remediation Aromatics BTEX and related aromatics Methylococcus capsulatus str. Bath superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae;genus:Methylococcus;species:Methylococcus capsulatus; 1122.4162 446.959 586.2757 1232.1882 920.9974 497.2032 514.9444 905.2543 490.6648 937.3788 641.5341 260938724 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Vibrio orientalis CIP 102891 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio orientalis; 28514.9269 12058.8025 19205.2065 27751.4457 16234.5005 15840.6083 16293.9631 15033.8454 15919.4597 18741.0208 23846.6773 17929.1602 254496707 ahpC Stress Oxygen stress Legionella drancourtii LLAP12 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Legionellales;family:Legionellaceae;genus:Legionella;species:Legionella drancourtii; 2114.7675 1807.7353 2248.8659 1559.4358 2543.4217 1933.7732 1871.1726 1939.6613 1939.9323 2168.089 2912.7429 2181.2874 145607671 nagI Organic Remediation Aromatics Aromatic carboxylic acid Magnaporthe grisea 70-15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe;species:Magnaporthe oryzae; 2099.1054 3369.0637 2513.3246 2045.0268 3505.9404 2748.5918 2360.0682 2273.376 2671.6836 2572.7835 2200.942 2163.4217 110280584 CopA Metal Resistance Copper Cytophaga hutchinsonii ATCC 33406 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Cytophaga;species:Cytophaga hutchinsonii; 3302.5318 2981.2227 807.6248 3170.8811 1596.3171 1234.9307 1205.67 1431.5602 1305.8924 1316.5244 3063.6174 991.5717 23013266 pnbA Organic Remediation Aromatics Nitoaromatics Magnetospirillum magnetotacticum MS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magnetotacticum; 2062.4755 3015.1179 2886.8294 2465.0819 2472.4088 3194.2967 2829.5159 2531.3605 3392.5255 3549.3342 1423.1334 3353.5288 50542742 rubisco Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 1548.7573 1305.5385 1178.5416 1105.0615 1427.4431 1055.5362 1029.3231 1076.7811 706.4119 603.2189 56962754 alkH Organic Remediation Other Hydrocarbons Bacillus clausii KSM-K16 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus clausii; 696.787 766.9744 824.3781 710.3886 640.6254 801.2484 284007503 sod_CuZn soil_benifit Arsenophonus nasoniae superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Arsenophonus; 1360.329 1114.4894 1156.2235 1448.0201 741.2061 1186.4124 924.2033 790.875 1670.1282 127511693 cytochrome Energy process Energy process Shewanella loihica PV-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella loihica; 1921.7319 1041.7931 1424.0263 1692.2881 612.4678 1377.9826 1201.059 1066.2654 1041.7644 898.7875 1134.5859 810.4145 188592332 pimF Organic Remediation Aromatics Aromatic carboxylic acid Cupriavidus taiwanensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus; 4284.6745 1180.8271 4167.5678 2152.4571 1415.3584 2160.4862 1591.4334 1156.5996 2325.9826 2920.2146 1569.3328 53756827 TehB Metal Resistance Tellurium Methylococcus capsulatus str. Bath superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae;genus:Methylococcus;species:Methylococcus capsulatus; 1353.0219 1237.6536 549.0468 1860.7776 146350794 pmoA Carbon cycling Methane Methane oxidation Methylococcaceae bacterium IT-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae; 1197.9326 1313.3115 1761.7931 837.7132 1008.3232 1165.2834 1645.3459 976.6934 850.2916 18588.8137 227540962 clpC Stress Protein stress Corynebacterium glucuronolyticum ATCC 51866 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium glucuronolyticum; 4519.3636 3188.7353 3391.7276 5470.2024 4227.7868 2960.5822 3324.8978 1938.1724 3799.1142 3852.0119 4702.7441 2852.9366 229604938 DNA_polymerase_type_I Bacteria phage REPLICATION Vibrio phage VP93 superkingdom:Viruses;order:Caudovirales;family:Podoviridae;genus:phiKMV-like viruses; 1013.937 719.1006 1501.1583 999.5138 968.8213 1631.5954 1090.7948 1097.7848 1325.1716 167348342 silC Metal Resistance Silver Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 3500.6716 2277.5661 1993.9741 3234.3281 4716.5258 2274.0737 3794.1448 2529.7082 2203.9089 2271.0772 3430.2809 3013.4815 225207696 cda Carbon cycling Carbon degradation Starch Coprococcus comes ATCC 27758 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Coprococcus;species:Coprococcus comes; 1030.4789 1078.2687 1334.3177 831.8781 1080.3901 1252.3872 1264.627 1294.6609 1309.0085 1251.29 702.7917 1234.2223 83590442 narI Stress Oxygen limitation Moorella thermoacetica ATCC 39073 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Moorella;species:Moorella thermoacetica; 1668.3048 1576.7383 2094.2384 2288.8056 1316.0824 2102.9963 2208.2772 1676.9662 1786.1803 255115520 pstC Stress Phosphate limitation Thermoanaerobacter italicus Ab9 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Thermoanaerobacter;species:Thermoanaerobacter italicus; 1581.8008 645.232 837.7817 1042.2057 1002.28 907.6439 1098.716 706.6129 750.048 1052.1451 213968438 gyrB other category gyrB Pseudomonas syringae pv. tomato T1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 3140.2428 1336.4935 2342.0349 3269.4896 3066.4584 2096.7519 2301.1915 2638.8161 1606.6562 2715.0552 2707.5007 2402.9687 125718981 clpC Stress Protein stress Streptococcus sanguinis SK36 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus;species:Streptococcus sanguinis; 2337.6899 2056.6994 2269.8609 2616.9121 3027.8378 1986.2549 1872.1935 1933.4033 1970.4176 2348.1257 4165.2897 3072.3246 26990249 pobA Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas putida KT2440 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 2719.2208 1625.8863 2530.2049 2243.1478 1293.2868 3066.5774 4198.6768 2231.7131 1890.3777 3352.6818 1384.7301 1477.2162 75676949 AceB Carbon cycling Carbon degradation Others Nitrobacter winogradskyi Nb-255 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter winogradskyi; 1889.7093 2987.9636 5909.3558 2840.6886 4498.4721 5679.2016 9508.1879 3139.1341 3037.8562 5075.3635 7316.3807 4304.0476 114776751 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mariprofundus ferrooxydans PV-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Zetaproteobacteria;order:Mariprofundales;family:Mariprofundaceae;genus:Mariprofundus;species:Mariprofundus ferrooxydans; 610.686 524.0775 467.3451 316.2465 314.2685 793.0521 434.6411 38199159 sigma_24 Stress Sigma factors Corynebacterium diphtheriae superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium; 4940.2915 6427.1537 7564.211 4674.8283 4421.1551 7723.1578 4988.5549 5907.5628 7444.1363 6545.8062 4394.5324 6724.5663 227271377 glnA Stress Nitrogen limitation Kribbella flavida DSM 17836 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Kribbella;species:Kribbella flavida; 2890.5498 2907.4688 1434.422 1560.6549 2543.0804 2097.6642 1990.8186 1426.7064 2098.8821 1857.9967 2293.1724 908.8343 240171700 narI Stress Oxygen limitation Mycobacterium kansasii ATCC 12478 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium kansasii; 25763.1462 50703.4599 25682.3292 24286.8622 53946.6663 17440.7367 40150.3848 24711.7197 22953.2972 18719.302 34790.5328 19942.1578 1255460 nifH Nitrogen Nitrogen fixation unidentified bacterium superkingdom:Bacteria; 2536.4341 2555.8253 3312.8654 2423.2154 3233.8332 3071.1391 2398.2755 2204.0428 2959.0512 2878.4092 4713.9395 3234.9431 163846288 carA Organic Remediation Aromatics Heterocyclic aromatics Chloroflexus aurantiacus J-10-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aurantiacus; 2955.4278 3304.2083 3720.7271 3178.2367 4669.7905 3390.6204 2693.393 2766.0523 3127.0638 2544.4542 5462.0416 3558.7656 138895541 bclA Organic Remediation Aromatics Aromatic carboxylic acid Geobacillus thermodenitrificans NG80-2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus;species:Geobacillus thermodenitrificans; 784.285 964.8153 1100.61 1367.8759 1230.4239 1190.862 568.453 1234.962 1303.4932 1655.5354 1057.6518 89885987 endolysin_transglycosylase Bacteria phage LYSIS Sodalis phage phiSG1 superkingdom:Viruses; 2046.9746 1550.2338 1960.4025 2662.8262 2433.646 1330.1076 2340.3852 1451.6412 1552.1975 1681.5668 2617.7427 124262216 phn Organic Remediation Herbicides related compound Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 2316.3325 4622.0561 3991.8739 3055.7808 2276.1491 4656.4009 3913.4926 4033.1073 5098.1337 3808.1948 2383.529 4142.5277 145320319 igaA soil_borne_pathogen regulation Enterobacter sp. 638 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter; 2922.5724 2611.6886 2598.5259 2776.2691 2843.3616 3464.4895 2149.211 2841.1996 2466.9185 2560.0984 4209.3267 2871.901 59711180 ChrA Metal Resistance Chromium Vibrio fischeri ES114 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Aliivibrio;species:Aliivibrio fischeri; 1082.5357 1065.2139 1107.8361 1353.7812 1863.1915 1215.0787 879.4568 937.3791 1086.3099 1035.3085 1991.1591 1451.3719 260536223 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Prevotella veroralis F0319 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Prevotellaceae;genus:Prevotella;species:Prevotella veroralis; 540.435 930.6525 608.7246 517.9719 670.0288 1594.4649 454.5664 899.9735 402.2713 218550493 arcB Stress Oxygen limitation Escherichia fergusonii ATCC 35469 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia;species:Escherichia fergusonii; 1158.0722 796.1931 1368.8199 550.4621 638.0773 3133.4936 820.4812 806.9211 1701.7588 1346.2508 260216309 cydB Stress Oxygen limitation Cronobacter turicensis z3032 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Cronobacter;species:Cronobacter turicensis; 2785.1241 2071.468 3471.3022 1524.1373 1263.3876 2603.9346 2520.8693 3351.3826 2537.449 2260.6552 2612.2955 118424359 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1162.7802 1496.9826 1765.3553 1217.9839 849.7839 1722.6204 1400.7671 1550.3879 1469.1871 1448.0652 1477.5612 1057.1025 110681866 endoglucanase Carbon cycling Carbon degradation Cellulose Rhizobium leguminosarum bv. trifolii superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 926.8822 1113.024 712.4639 942.8417 1525.2188 793.9246 1464.4843 647.3159 1034.8566 886.2588 696.329 703.11 94554246 cat_bac soil_benifit Deinococcus geothermalis DSM 11300 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus geothermalis; 8317.3322 5293.9073 8990.9562 8284.2904 8203.355 4161.632 8416.7613 5865.2463 4657.5826 5034.6283 5936.0471 5207.6773 283102101 srt virulence surface protein Bifidobacterium dentium Bd1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium dentium; 29953.9021 74343.1256 40532.6738 33123.7382 63073.1421 43650.9033 50603.2492 37749.2719 47585.2837 32422.233 44634.1576 19297.1768 84358870 PobA Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia dolosa AUO158 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia dolosa; 4907.0197 3283.8457 4367.5888 4502.6093 3803.8895 4591.2065 3804.5369 4725.0601 4200.6181 4408.6483 4257.0396 3630.8742 302681527 amyA_fungi Fungi function carbon degradation Schizophyllum commune H4-8 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Schizophyllaceae;genus:Schizophyllum;species:Schizophyllum commune; 2909.5431 2126.656 2179.1636 2795.2539 994.4259 1917.785 1884.8681 1600.8748 2488.504 1637.1913 1675.9563 2181.9878 211961314 cspA Stress Cold shock Pseudovibrio sp. JE062 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pseudovibrio; 1518.951 651.2402 1300.3197 1193.2363 879.6296 827.7577 859.1507 6466835 phenol_oxidase Carbon cycling Carbon degradation Lignin Pycnoporus cinnabarinus superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Polyporaceae;genus:Pycnoporus; 1621.5604 969.3262 2079.4954 753.8981 845.273 1149.3159 1159.3877 1925.1724 1473.5555 1595.1273 1355.4789 171910769 xylA Carbon cycling Carbon degradation Hemicellulose Verrucomicrobium spinosum DSM 4136 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobiaceae;genus:Verrucomicrobium;species:Verrucomicrobium spinosum; 732.3599 431.2208 401.2039 665.6449 1263.653 524.8847 465.194 588.0309 27542563 ChrA Metal Resistance Chromium Acetobacter aceti superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Acetobacter; 1891.8585 2443.9966 1859.324 2498.6751 2129.7815 1986.4343 1874.5449 1795.6204 2257.5522 2053.7669 2565.0589 1464.5 81251098 gyrB other category gyrB Nitrosomonas sp. CNS332 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas; 1084.2416 439.3899 726.6108 920.2682 557.8775 541.2445 744.5677 1203.993 694.0878 170741858 BchY other category chlorophyllide reductase Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 3158.2958 2899.9762 3120.4644 2870.919 3965.7471 3210.4719 2791.4634 3108.8129 3176.1058 2844.0165 2857.7506 3627.7157 256728095 ara_fungi Carbon cycling Carbon degradation Hemicellulose Nectria haematococca mpVI 77-13-4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Nectria;species:Nectria haematococca; 710.4476 1272.2167 612.0106 753.7063 943.3696 713.9683 1889.1465 1131.566 652.8911 833.029 534.4887 195931875 Catechol Organic Remediation Aromatics Other aromatics Gordonia hydrophobica superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Gordoniaceae;genus:Gordonia; 2228.942 4384.4457 3632.3997 2075.901 4395.0858 3114.288 2653.3963 3459.8732 2686.8039 2896.3202 2008.4568 3309.853 114188523 nagG Organic Remediation Aromatics Aromatic carboxylic acid Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 2372.8357 2531.2831 2934.7225 3166.2925 3633.4623 2319.0323 1605.0749 2355.1646 2494.445 1852.5861 3918.1966 3039.2296 95111170 silC Metal Resistance Silver Pseudomonas superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae; 2769.0412 4362.2354 1980.6269 2961.898 1713.3353 5195.964 3608.1322 2342.3946 3698.7353 3557.9658 1329.6177 4151.6323 159892289 SMR_antibiotics Antibiotic resistance transporter Herpetosiphon aurantiacus ATCC 23779 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Herpetosiphonales;family:Herpetosiphonaceae;genus:Herpetosiphon;species:Herpetosiphon aurantiacus; 6100.036 2995.2905 4710.0227 7191.9128 5062.7458 2789.2879 3429.816 2247.6182 3147.4611 3863.2901 6679.7527 3652.8184 88184083 endochitinase Carbon cycling Carbon degradation Chitin Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 2664.2022 2814.238 3755.2292 2918.6618 2215.8104 1727.0773 2914.4529 4581.104 2891.3358 3102.1123 2586.2684 4206.6166 78358322 tutFDG Organic Remediation Aromatics BTEX and related aromatics Desulfovibrio desulfuricans G20 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio alaskensis; 1110.3406 496.9609 962.0868 649.1179 1152.8726 693.0664 479.1426 901.367 529.1468 260767300 pilin virulence pilin Vibrio furnissii CIP 102972 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio furnissii; 1881.435 1383.8542 1603.8216 1374.0124 2083.7667 1360.5286 1356.3009 944.7022 1228.4269 1467.6065 2840.8613 2111.0327 144944416 bco Organic Remediation Aromatics Aromatic carboxylic acid Geobacter bemidjiensis Bem superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter bemidjiensis; 2018.5116 1886.3442 1248.4475 2052.8572 2203.2308 1472.6111 1281.9585 1134.5214 1524.6943 1338.8015 2271.286 1820.9506 119358300 CopA Metal Resistance Copper Chlorobium phaeobacteroides DSM 266 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium phaeobacteroides; 1168.7576 474.9145 622.6077 844.9789 220710356 sigma_32 Stress Sigma factors Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 610.0949 1006.3433 530.911 1063.1608 916.4281 735.9391 669.4484 420.0327 828.484 801.0588 696.8576 914.4234 262194709 endochitinase Carbon cycling Carbon degradation Chitin Haliangium ochraceum DSM 14365 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Haliangiaceae;genus:Haliangium;species:Haliangium ochraceum; 2049.5939 2170.4012 2542.5198 3091.3122 2836.9343 2449.1819 1755.1628 1443.2287 1736.5652 2647.152 2473.0687 2310.9895 193088949 Arylest Organic Remediation Aromatics Other aromatics Chloroherpeton thalassium ATCC 35110 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chloroherpeton;species:Chloroherpeton thalassium; 962.2763 981.3424 1209.4235 552.8458 842.4877 763.8254 1227.3369 883.1758 903.2653 1199.0125 158338781 dnaK Stress Heat shock Acaryochloris marina MBIC11017 superkingdom:Bacteria;phylum:Cyanobacteria;genus:Acaryochloris;species:Acaryochloris marina; 2836.5385 1295.1788 1379.1865 1513.7386 1586.4676 1485.5034 925.3033 1292.5305 1611.6303 1074.2906 2764.7273 1133.2484 156036254 tre_fun soil_benifit Sclerotinia sclerotiorum 1980 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Sclerotinia;species:Sclerotinia sclerotiorum; 784.8827 1149.9455 1030.7478 900.8178 873.1814 1173.0814 833.7192 8171.924 1273.619 1232.2307 1091.7904 53804923 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Methylococcus capsulatus str. Bath superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae;genus:Methylococcus;species:Methylococcus capsulatus; 2494.6597 2206.3989 1673.7274 2472.8827 3076.507 2328.5744 3804.0207 2081.1239 2032.355 1777.6094 16015.5038 2478.9773 189207941 siderophore_transporter Fungi function iron Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 566.8295 1691.5615 575.3274 893.6676 684.3432 1558.4602 1292.7061 656.3784 766.0186 1357.0921 1529.5776 98977240 fnr Stress Oxygen stress Sphingopyxis alaskensis RB2256 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingopyxis;species:Sphingopyxis alaskensis; 7326.4048 14609.1357 10076.5905 10001.9053 9252.3292 17905.0696 11963.218 11141.1235 14959.0864 13024.3569 8970.859 12602.9041 68568617 cytochrome_b Bioleaching Electron transport Sulfolobus acidocaldarius DSM 639;Sulfolobus acidocaldarius 914.6186 649.985 599.0413 925.0349 831.2854 1778.3556 580.1005 891.7727 697.6798 864.4052 780.2171 115255558 sigma_24 Stress Sigma factors Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 755.2175 682.058 529.1227 500.1377 529.7854 363.7791 505.391 1313.0836 414.8186 652.277 26617.8808 729.6271 497876 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 848.6276 768.1012 772.2295 795.7594 927.7328 798.0034 723.6095 839.438 760.8165 757.7168 1204.2933 760.9232 148498414 tfdA Organic Remediation Aromatics Chlorinated aromatics Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 2549.9873 5980.5781 4502.8787 3571.8214 7121.1826 5594.8482 4348.7189 6649.4216 5582.4965 6127.0755 3434.4612 5679.7818 242765885 ara_fungi Carbon cycling Carbon degradation Hemicellulose Talaromyces stipitatus ATCC 10500 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus; 1083.6573 792.8927 1385.0968 816.5848 1233.7728 776.1341 983.3943 1833.8094 900.8414 939.4446 955.7467 1095.0702 119394773 B_lactamase_A Antibiotic resistance Beta-lactamases Citrobacter gillenii superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter; 557.5913 972.3079 681.7933 1136.6431 886.8436 1050.9204 1267.1352 998.8224 169292137 ChrA Metal Resistance Chromium Clostridium spiroforme DSM 1552 superkingdom:Bacteria;phylum:Firmicutes;class:Erysipelotrichi;order:Erysipelotrichales;family:Erysipelotrichaceae;species:Clostridium spiroforme; 1269.0834 1238.8822 1236.6164 1458.4303 1996.2116 1400.2825 827.2235 978.4731 1135.3636 1338.4888 2798.1696 2007.5732 108765846 merB Metal Resistance Mercury Rubrobacter xylanophilus DSM 9941 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Rubrobacterales;family:Rubrobacteraceae;genus:Rubrobacter;species:Rubrobacter xylanophilus; 1190.894 1120.4147 690.0876 1368.1225 807.9227 914.2779 916.7694 740.7452 877.7939 662.7958 1547.4968 1048.6159 197779364 pcc Carbon cycling Carbon fixation Streptomyces sviceus ATCC 29083 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces sviceus; 7195.1578 10964.7394 9797.9412 9524.9712 10682.1057 11478.9061 8733.3969 7311.8763 10640.4763 11125.5357 9103.2586 12040.9077 3282336 rubisco Carbon cycling Carbon fixation Thiobacillus intermedius K12 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Thiomonas;species:Thiomonas intermedia; 1676.9283 1480.7741 1833.9816 1701.5202 1967.905 1755.1802 1171.2823 1197.5362 1453.0184 1617.3486 3389.423 1934.064 47779223 helicase_family_4 Bacteria phage REPLICATION Acinetobacter phage 133 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 948.8709 1150.6273 2150.2009 451.1547 1027.2638 1419.2321 1368.3523 1894.8754 1255.5224 1246.8346 816.0917 1565.5839 264672869 pstB Stress Phosphate limitation Caulobacter segnis ATCC 21756 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter;species:Caulobacter segnis; 13506.3898 8543.4118 10101.0023 13932.7251 8158.8949 12488.2461 13517.2618 12225.0248 9729.9139 13274.0276 8854.0514 7378.281 115424466 gyrB other category gyrB Bordetella avium 197N superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella avium; 2768.4368 5531.3776 3074.7813 4685.074 8151.9746 6358.2769 5140.2105 2732.6727 4206.4542 4801.9083 7802.038 4377.6255 68201857 CODH Carbon cycling Carbon fixation Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 4381.2258 6801.8995 4314.2434 6134.2585 5238.5007 6054.6792 5276.4079 3589.1105 5543.9734 6602.476 4080.8191 5910.3067 225730217 B_lactamase_C Antibiotic resistance Beta-lactamases Escherichia coli superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia; 3382.1181 2931.0171 3281.9399 3416.1216 3702.8352 3178.0467 2330.3259 3783.1662 2705.0578 2907.6095 4867.0243 4073.7149 121713048 protease_serine_fungi Fungi function carbon degradation Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 2029.5798 1538.6763 2087.2304 1754.1187 802.8226 1022.9204 969.7389 1780.0059 1186.2345 1091.6433 1456.5877 2069.8494 50843215 aclB Carbon cycling Carbon fixation Propionibacterium acnes KPA171202 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Propionibacteriaceae;genus:Propionibacterium;species:Propionibacterium acnes; 1684.4369 1112.132 1708.5495 1956.7736 2042.4755 1013.6355 1299.7326 1203.2536 1112.1784 1270.6853 859.1369 6458429 cda Carbon cycling Carbon degradation Starch Deinococcus radiodurans R1 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus radiodurans; 1486.3308 1860.4322 2355.7824 1402.6129 1451.9402 1625.2176 1543.6346 2862.2368 1797.2561 1763.0279 2485.8497 2306.7805 111055738 nagG Organic Remediation Aromatics Aromatic carboxylic acid Phaeosphaeria nodorum SN15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Phaeosphaeriaceae;genus:Phaeosphaeria;species:Phaeosphaeria nodorum; 1402.8423 1261.2581 1622.8828 1309.5656 2295.0139 1561.242 1015.7345 1494.6114 1467.6262 1499.3192 1368.6335 1760.0751 118766161 pulA Carbon cycling Carbon degradation Starch Bifidobacterium adolescentis ATCC 15703 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium adolescentis; 1584.8633 648.5578 1033.4666 1479.6888 544.3451 1286.971 1552.954 769.0511 1083.8044 583.6366 111220106 MFS_antibiotic Antibiotic resistance transporter Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 4629.1189 18332.9638 3235.3118 5449.5192 2883.8402 2735.5798 2394.3986 2608.2771 6218.0158 2846.2163 4875.2888 3249.5268 115364375 catB Organic Remediation Aromatics BTEX and related aromatics Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 2094.2563 3160.5997 2304.4358 1927.6527 3044.4274 2583.4445 1857.8098 2529.6114 2176.0446 2277.1071 1874.8801 2268.2956 120403311 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 2246.189 1178.1894 1677.4059 2237.025 1714.1506 1552.6272 1497.0712 1375.7353 1652.9375 1512.8194 2803.7673 1709.4577 41407741 AceA Carbon cycling Carbon degradation Others Mycobacterium avium subsp. paratuberculosis K-10 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium avium; 3976.551 4201.3989 4674.6482 4367.2777 2595.6363 4921.6956 5219.2289 3917.9351 5366.898 5530.6196 4181.3141 4714.9881 269921944 vdh Carbon cycling Carbon degradation Others Brevundimonas subvibrioides ATCC 15264 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Brevundimonas;species:Brevundimonas subvibrioides; 2994.8247 2170.7835 1790.2469 2220.3688 2422.2323 2370.0631 1710.383 1208.5457 2392.1207 1935.1904 3356.6215 2121.2221 255297070 clpC Stress Protein stress Corynebacterium tuberculostearicum SK141 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium tuberculostearicum; 5723.878 6255.3713 6133.5111 5320.694 3021.0693 8399.197 6615.3964 7124.9379 5347.4326 5922.1489 3775.2903 4164.0051 229323920 vdh Carbon cycling Carbon degradation Others Rhodococcus erythropolis SK121 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus erythropolis; 1765.5815 2529.6648 2117.9814 1770.1951 2942.5768 2409.9515 2019.0812 1085.9711 2610.8994 2893.2271 1367.3842 1597.7176 220029050 T4_recomb_endonuclease Bacteria phage REPLICATION Enterobacteria phage JSE superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 738.1585 764.8464 499.0113 786.6762 1067.0863 1084.9 478.9903 755.2937 706.6464 649.9375 192897530 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 902.8653 1360.1276 1420.7404 1056.9421 922.4193 1259.5737 1458.7033 1417.6524 1813.9491 1385.8234 1062.9925 1531.61 145224488 clpC Stress Protein stress Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 4494.4198 3438.1071 4579.2691 5129.9696 1781.3432 3062.6888 2517.5659 3467.632 3809.2138 3771.0328 2255.622 5225.7079 170731211 ppx Phosphorus Phosphorus utilization Xylella fastidiosa M12 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xylella;species:Xylella fastidiosa; 2639.8561 2050.9958 2111.0242 2059.5667 1679.9446 1622.9292 2097.4974 4045.3447 2081.1465 2175.9167 2691.7764 1919.1232 86739205 CopA Metal Resistance Copper Frankia sp. CcI3 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 2047.8747 1044.5519 1752.6332 2134.1292 1797.2217 1709.399 1422.6409 1365.253 1114.0402 1399.5637 3567.5815 1469.2721 170776765 TehB Metal Resistance Tellurium Leptothrix cholodnii SP-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Leptothrix;species:Leptothrix cholodnii; 2125.8357 2502.7271 2675.2363 3213.6174 1890.607 3246.5016 4350.038 2504.0351 2542.0425 2720.8283 3130.1175 2258.3534 21623498 nosZ Nitrogen Denitrification Pseudomonas sp. MT-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 618.1847 602.2896 1011.9463 641.5303 677.4431 860.6864 693.4495 654.1083 258521124 pstB Stress Phosphate limitation Corynebacterium genitalium ATCC 33030 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium genitalium; 4015.1689 2403.2842 3284.2372 3315.7598 1216.5765 3699.707 4493.6452 2089.5364 3221.3153 4480.5826 2836.2486 2160.1534 224282667 sigma_24 Stress Sigma factors Bifidobacterium bifidum NCIMB 41171 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium bifidum; 9608.7804 12594.1045 10536.5762 11051.122 5941.2738 11449.7712 16166.1503 10814.7318 11405.2173 9730.1985 8716.4865 5010.7417 115385653 ara_fungi Carbon cycling Carbon degradation Hemicellulose Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 3775.2412 3520.7043 1079.0915 3398.9723 2400.5806 1744.6809 1916.675 2195.3156 2005.2246 2013.9473 4339.1317 1464.4588 212711131 TerC Metal Resistance Tellurium Providencia alcalifaciens DSM 30120 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia alcalifaciens; 10474.7069 7257.293 7778.9156 9888.1473 5864.8669 6064.8046 6377.4007 6478.6303 6192.7143 6928.4581 8112.7963 6105.1824 187727061 hly virulence hemolysin Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 1858.4658 4255.045 2494.6995 2711.1511 2701.9045 2826.2 4338.7971 1357.01 3014.8962 3074.6149 3886.5322 2219.4222 197087974 ppx Phosphorus Phosphorus utilization Geobacter bemidjiensis Bem superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter bemidjiensis; 997.9391 2084.2361 1883.0379 1122.882 2259.2941 1708.3371 1736.1681 1416.9625 1547.7592 1117.8063 1671.0073 1251.0032 24575104 dehH Organic Remediation Chlorinated solvents Streptomyces globisporus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 1130.1666 717.7899 1109.8135 1738.0926 993.6313 1147.252 2375.0139 1223.1246 1286.7765 854.6019 775.7378 187724121 phdCI Organic Remediation Aromatics Polycyclic aromatics Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 2181.9021 1915.9196 3247.714 1736.2024 2049.886 1771.2433 2134.8158 4614.1366 2149.8229 2784.3319 2249.3996 3173.4908 222481421 pstA Stress Phosphate limitation Halorubrum lacusprofundi ATCC 49239 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halorubrum;species:Halorubrum lacusprofundi; 1655.8933 660.7015 969.5074 1381.0119 980.9474 778.3103 755.7733 676.0841 756.3887 944.6928 1261.0514 1031.5328 209548034 ppx Phosphorus Phosphorus utilization Rhizobium leguminosarum bv. trifolii WSM2304 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 3372.3797 2682.499 3234.9192 3740.931 3976.7816 3191.1334 2387.1264 2210.1312 3003.7481 3207.4845 5245.7722 3656.2653 149922638 sigma_24 Stress Sigma factors Plesiocystis pacifica SIR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Nannocystaceae;genus:Plesiocystis;species:Plesiocystis pacifica; 2622.1993 2888.8392 5128.9926 3149.1569 4015.7783 4793.1443 1898.6278 3703.3832 3819.8079 2762.397 3082.3492 78060299 pimF Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia sp. 383 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 3416.0347 5179.4664 5562.938 3435.3529 4914.8615 4761.4838 3995.0229 4292.9255 4351.6932 3890.9493 3361.955 4849.0296 28850814 nmoA Organic Remediation Aromatics Nitoaromatics Pseudomonas syringae pv. tomato str. DC3000 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 2137.8441 772.6831 778.0079 2028.8226 1076.7499 1084.1514 1672.3707 4794.1997 1030.0572 1182.7057 1140.2317 1191.7619 148271657 sigma_24 Stress Sigma factors Clavibacter michiganensis subsp. michiganensis NCPPB 382 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Clavibacter;species:Clavibacter michiganensis; 5370.9309 7430.5917 6135.5902 6523.7065 7844.2424 8150.5039 6422.0543 4654.2259 8472.7607 8107.0769 4973.221 6429.3208 261835120 pilin virulence pilin Halothiobacillus neapolitanus c2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Halothiobacillaceae;genus:Halothiobacillus;species:Halothiobacillus neapolitanus; 1190.1418 1018.0155 929.1022 1147.9759 1400.1617 1300.883 1811.7569 733.9668 1293.0203 1208.7123 1347.9261 95111342 ArsC Metal Resistance Arsenic Pseudomonas entomophila L48 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas entomophila; 3778.6127 6267.7571 2913.5384 3452.968 6762.6957 3776.5674 4653.1043 2365.3927 4581.0258 2693.6715 5575.1014 2818.2762 221571957 obgE Stress Radiation stress Thermotoga neapolitana DSM 4359 superkingdom:Bacteria;phylum:Thermotogae;class:Thermotogae;order:Thermotogales;family:Thermotogaceae;genus:Thermotoga;species:Thermotoga neapolitana; 528.3759 423.9586 540.3018 560.2699 619.7303 618.7975 562.646 442.4835 404.3482 644.8683 503.1378 88789086 sir Sulphur sulfite reductase Nitrococcus mobilis Nb-231 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Nitrococcus;species:Nitrococcus mobilis; 1510.2603 752.1567 1468.6189 1716.93 1068.193 1421.8494 1940.9227 1057.8516 1234.5068 1665.2654 1671.7349 73749324 rd Organic Remediation Chlorinated solvents Dehalococcoides sp. CBDB1 superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides; 1042.4 583.9076 1104.3082 819.799 759.5929 569.485 634.1681 925.9667 1124.3274 1067.4978 212636099 linB Organic Remediation Pesticides related compound Shewanella piezotolerans WP3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella piezotolerans; 1653.9591 1076.3318 1092.3806 1110.6158 745.0718 962.1679 1524.9438 1269.5869 1260.345 1211.7217 793.0521 950.512 88702657 nosZ Nitrogen Denitrification uncultured soil bacterium superkingdom:Bacteria; 392.2522 987.7774 437.6399 577.1589 708.782 710.2292 614.6551 747.5841 626.2468 738.8728 495.8048 41395431 ArsC Metal Resistance Arsenic Mycobacterium avium subsp. paratuberculosis K-10 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium avium; 1130.489 617.8738 1006.9757 857.5472 794.8975 566.3049 612.6363 767.7498 557.6346 727.2597 592.4527 219965628 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2668.1019 2160.6149 2926.2314 1666.3861 1728.9959 1962.938 1814.1541 4376.9171 1840.4388 2425.3082 3151.1871 2525.5025 161380982 phn Organic Remediation Herbicides related compound Oceanibulbus indolifex HEL-45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 8230.9625 10939.9042 14711.4732 19702.6431 19851.8282 9701.9495 7947.1128 13495.465 26665.6617 8484.5587 20395.4228 24385.7123 254420452 fnr Stress Oxygen stress Brevundimonas sp. BAL3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Brevundimonas; 1949.2815 1896.449 2343.7215 1476.8397 950.0813 2338.4605 1864.6231 2339.417 2527.1203 1882.8979 1381.1264 1895.2975 iegcoxL13 CODH Carbon cycling Carbon fixation 1556.1182 520.3805 896.6937 1421.0086 698.9812 534.3583 847.6039 1813.1595 516.1978 923.778 1241.6155 653.328 22295073 nirA Nitrogen Assimilatory N reduction Thermosynechococcus elongatus BP-1 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Thermosynechococcus;species:Thermosynechococcus elongatus; 1150.53 2114.9329 1364.5162 1057.9831 2200.9935 1683.5695 1342.7507 1656.8328 1630.455 1779.3961 889.1985 1829.4372 188030457 pap virulence adhesin Erwinia tasmaniensis Et1/99 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Erwinia;species:Erwinia tasmaniensis; 3164.5418 4281.7407 4094.3918 4129.6394 4225.1894 4752.7942 3729.2922 3785.6597 4424.6854 4711.2367 3633.0966 5632.5699 152968136 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Kineococcus radiotolerans SRS30216 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Kineosporiaceae;genus:Kineococcus;species:Kineococcus radiotolerans; 5878.1748 7583.1838 8689.3927 6812.4503 7582.9611 7203.1277 7364.712 9088.9651 7347.6248 9744.9829 5763.3102 8630.4789 115258988 sigma_32 Stress Sigma factors Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 4152.8231 2171.3314 3102.3337 3331.9229 2747.5401 2056.1007 2106.5417 2139.7933 2140.4571 2225.2836 4112.1713 2741.9518 223690792 ChrA Metal Resistance Chromium Desulfobacterium autotrophicum HRM2 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfobacterium;species:Desulfobacterium autotrophicum; 3012.2195 3043.0114 3309.7103 3797.9264 3878.4384 3440.704 2341.7846 2452.3619 2703.357 3240.6823 4944.4556 3038.4469 148851265 ahpF Stress Oxygen stress Bacillus sp. SG-1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 1146.9973 950.722 1240.7415 1012.884 1183.0845 989.0668 994.2795 691.1578 568.7011 770.9819 1741.2552 1313.7875 89209326 amyA Carbon cycling Carbon degradation Starch Bacillus weihenstephanensis KBAB4 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus weihenstephanensis; 904.3563 881.7848 711.4606 746.3918 1100.0512 964.2319 817.0358 809.2866 672.9572 1385.7391 767.7756 171686642 phospholipase_C_fungi Fungi function carbon degradation Podospora anserina S mat+ superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Lasiosphaeriaceae;genus:Podospora;species:Podospora anserina; 2389.552 770.313 732.034 1726.8196 1348.0609 1100.7529 876.0386 1476.0676 1518.8349 1056.6923 809.9751 225557630 chitin_synthase Fungi function major biomolecule Ajellomyces capsulatus G186AR superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces capsulatus; 2382.5403 3811.0434 3683.8258 2938.4478 1206.7934 3396.7674 4375.651 3060.6621 3086.0013 3273.7015 18371.7086 1532.2417 86356567 alkK Organic Remediation Others Rhizobium etli CFN 42 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 506.0618 698.1081 530.4751 4306.03 339.3483 771.7443 219548675 cda Carbon cycling Carbon degradation Starch Vibrio parahaemolyticus 16 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio parahaemolyticus; 1338.5419 1037.4102 1597.4875 980.0942 809.6826 1303.3276 1528.9875 859.5259 1407.5756 88643464 dsrB Sulphur sulfite reductase uncultured prokaryote 2350.7058 979.8898 1219.6593 1060.8733 522.5239 1371.4916 1839.0216 959.5299 1352.127 1869.2748 1233.7355 1157.4859 255502879 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 5432.8404 2615.8555 4107.899 5448.3823 3186.0362 3484.6206 4389.3579 3132.6341 3338.259 3792.0481 3626.658 3485.3525 119461025 sigma_70 Stress Sigma factors marine gamma proteobacterium HTCC2080 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 683.7039 408.4636 694.7111 364.3642 341.1124 436.1245 521.4062 1065.2269 740.2972 78519030 ureC Nitrogen Ammonification Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1698.4737 2626.865 1903.7857 2396.3135 1155.5248 2720.474 4578.7314 2180.4394 2640.8372 2067.658 2508.0485 1981.2346 300562127 tre_fun soil_benifit Yarrowia lipolytica superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Dipodascaceae;genus:Yarrowia; 707.6672 396.1585 357.0909 691.5058 1295.4671 520.4601 1074.4392 488.1774 610.5324 372.8588 728.8344 667.0488 126739238 atzB Organic Remediation Herbicides related compound Roseobacter sp. SK209-2-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 3254.8068 2262.8739 3269.9448 3078.327 2885.1863 2946.5981 2215.1648 3147.6919 2489.8437 2691.4047 3695.1762 3063.3299 116203293 nagG Organic Remediation Aromatics Aromatic carboxylic acid Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 2966.8452 912.4052 1385.8456 2721.9858 1354.109 1069.5092 1649.0517 1491.6579 1812.2833 1900.3957 3489.3815 1361.7958 302697947 chitin_synthase Fungi function major biomolecule Schizophyllum commune H4-8 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Schizophyllaceae;genus:Schizophyllum;species:Schizophyllum commune; 1896.7075 3372.2408 3381.6808 2334.6198 1924.6773 3105.6134 3264.6906 3602.4857 3230.9373 4546.5204 1967.2066 3680.6676 150397616 glnA Stress Nitrogen limitation Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 5443.143 5119.0285 4699.0454 4916.9868 6966.4728 5527.7543 4854.51 4527.5547 6386.1799 6283.3835 5498.2707 5129.5952 91798359 AceB Carbon cycling Carbon degradation Others Chromohalobacter salexigens DSM 3043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Halomonadaceae;genus:Chromohalobacter;species:Chromohalobacter salexigens; 1356.3128 1550.7435 1036.974 1228.2552 1843.4522 1394.7109 1384.1732 1219.7448 1472.1902 254523597 ppk Phosphorus Phosphorus utilization Stenotrophomonas sp. SKA14 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas; 3697.992 2785.3187 3582.791 3224.096 2907.7861 2858.8944 3259.1161 1984.3744 2234.4873 3246.3102 3649.6256 3297.6862 13507863 hrcA Stress Heat shock Mycoplasma pneumoniae M129 superkingdom:Bacteria;phylum:Tenericutes;class:Mollicutes;order:Mycoplasmatales;family:Mycoplasmataceae;genus:Mycoplasma;species:Mycoplasma pneumoniae; 1378.9865 1166.0203 1195.8145 1529.767 2058.1145 1308.2115 1043.0107 1014.447 935.3979 1508.3305 2563.7615 1455.5008 118436205 pcc Carbon cycling Carbon fixation Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 800.0948 687.6393 608.87 660.6042 927.0356 992.7367 445.0645 674.287 655.2249 6491812 sigma_24 Stress Sigma factors Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 3600.2586 3658.0691 4917.414 3527.9619 5882.5182 3162.2977 2943.3981 3046.1854 2744.7224 3013.2999 6282.0734 4488.885 106760729 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Psychromonas ingrahamii 37 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Psychromonadaceae;genus:Psychromonas;species:Psychromonas ingrahamii; 1083.8655 664.5838 989.9209 1296.3475 545.9643 801.8951 801.5207 547.8611 910.557 1394.5612 139478569 mer Metal Resistance Mercury uncultured soil bacterium superkingdom:Bacteria; 564.697 1396.635 1892.8229 852.1367 851.3021 794.7323 665.4797 1582.2221 981.9005 1040.6349 938.0886 1171.6302 85670856 nhh Organic Remediation Aromatics Nitoaromatics Roseovarius sp. 217 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 800.5515 568.6117 170767682 CopA Metal Resistance Copper Escherichia albertii TW07627 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia;species:Escherichia albertii; 1275.1011 3163.7981 1824.2983 2130.4856 2007.72 1998.0853 3151.4106 2037.5727 2726.783 1757.9677 1910.1722 1673.6025 209884363 pimF Organic Remediation Aromatics Aromatic carboxylic acid Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 1043.0089 625.8085 615.2234 610.3538 209516876 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1483.0331 658.8156 1174.5869 1540.3689 527.0408 1214.8233 1231.5734 683.8508 893.3271 770.3298 87281008 nirK Nitrogen Denitrification nitrifying uncultured bacterium superkingdom:Bacteria; 1209.1217 1281.3659 1039.108 1773.1035 1217.741 1027.5833 642.7525 1084.1432 906.7492 770.7281 145702845 glycosyl_transferase_EPS Bioleaching EPS Metallosphaera sedula DSM 5348 619.0176 645.851 800.4702 637.3024 616.8821 492.284 623.4452 695.2665 72121881 nagG Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 1871.8981 4251.3752 2948.8112 2814.2935 2557.8499 3822.8421 3722.238 2817.8989 4181.5022 4492.7316 2082.1002 3945.5647 218512286 fnr Stress Oxygen stress Rhizobium etli 8C-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 10559.102 5701.8178 6291.8897 11282.1992 7173.4161 9466.3132 10337.7835 21446.8342 7195.746 8107.3225 8969.1533 6899.9421 121528959 chnB Organic Remediation Other Hydrocarbons Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 3264.3035 4109.3084 3590.8168 3206.9467 4763.3748 3834.523 3345.8654 4038.9173 3275.7624 4070.7739 3402.1721 5596.8521 225682022 endochitinase_fungi Fungi function carbon degradation Paracoccidioides brasiliensis Pb03 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Paracoccidioides;species:Paracoccidioides brasiliensis; 777.0987 1848.3204 1149.1428 732.1601 2348.2333 1114.1637 1491.7719 1176.62 1088.5232 2142.4397 1555.161 206603624 pstC Stress Phosphate limitation Leptospirillum sp. Group II '5-way CG' superkingdom:Bacteria;phylum:Nitrospirae;class:Nitrospira;order:Nitrospirales;family:Nitrospiraceae;genus:Leptospirillum; 1797.6846 1755.236 1856.009 1961.5541 1926.9714 1996.9037 1491.6802 1349.118 1861.6515 1634.5114 2827.0712 2237.9746 111023819 dmsA Organic Remediation Others Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1266.2627 640.9505 1412.7146 1191.3011 1432.6963 864.9969 800.1516 1171.6452 1178.5345 946.7028 932.7311 1083.1802 133739463 silC Metal Resistance Silver Herminiimonas arsenicoxydans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Herminiimonas; 2975.1598 1007.3882 1274.6767 2622.8158 1720.2935 2102.0763 1987.9281 2133.7533 1461.6503 1728.9349 1049.1063 1399.2439 6014450 phospholipase_B_fungi Fungi function virulence Schizosaccharomyces pombe superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Schizosaccharomycetes;order:Schizosaccharomycetales;family:Schizosaccharomycetaceae;genus:Schizosaccharomyces; 542.2887 496.0688 981.118 626.3245 1008.061 842.1715 439.8463 862.8916 536.0697 50982464 pmoA Carbon cycling Methane Methane oxidation uncultured bacterium superkingdom:Bacteria; 1419.955 3700.9605 2332.0753 2832.1139 2027.6465 3671.3649 4215.5495 2445.983 2795.3254 3055.8664 2404.07 2333.5929 228572007 endochitinase Carbon cycling Carbon degradation Chitin Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiopsaceae;genus:Nocardiopsis;species:Nocardiopsis dassonvillei; 8365.0034 8953.3908 9431.5317 9268.0467 7880.0001 8933.7796 8447.0312 8262.8848 9072.1916 6984.4802 11267.2027 7748.3953 62468106 bco Organic Remediation Aromatics Aromatic carboxylic acid Acidovorax sp. 2FB7 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax; 1539.2607 637.3826 1009.9999 1326.3587 896.2362 767.3772 793.6251 424.0634 982.1102 1187.8199 1410.1241 1066.1246 301096134 CRN_Oomycetes soil_borne_pathogen oomycete effector protein Phytophthora infestans T30-4 superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora;species:Phytophthora infestans; 4452.6319 3935.9714 5078.1189 3994.7872 4323.2102 3270.656 4134.4665 2174.811 4003.3434 2705.8987 4478.3302 4286.4702 120588548 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Acidovorax avenae subsp. citrulli AAC00-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax citrulli; 2099.4815 4237.1162 2259.6978 2055.8067 4450.8079 2425.8949 4482.8861 1852.6921 2979.2854 2430.7462 3090.6691 2737.324 116699377 pstA Stress Phosphate limitation Syntrophobacter fumaroxidans MPOB superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Syntrophobacterales;family:Syntrophobacteraceae;genus:Syntrophobacter;species:Syntrophobacter fumaroxidans; 3103.5726 4460.901 3618.2528 3509.936 3885.0932 5152.4561 4369.1818 3126.812 4929.958 4499.1635 2821.5696 4093.4346 133912268 dnaK Stress Heat shock Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 1407.1675 1184.395 1457.6125 1409.8694 1218.5511 1622.0815 1321.8398 1170.0653 1649.461 257167731 sid_arc soil_benifit Halomicrobium mukohataei DSM 12286 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halomicrobium;species:Halomicrobium mukohataei; 1524.4046 3687.6318 3064.3856 1395.2984 3855.5353 2390.3438 1924.4174 2057.3753 2315.9367 2044.4094 1042.7158 1693.281 168997439 pmoA Carbon cycling Methane Methane oxidation uncultured bacterium superkingdom:Bacteria; 3675.2243 4228.5915 3135.2656 4551.6875 2198.0169 4126.4697 3347.5745 2792.2015 2802.6292 3340.0526 2482.4383 3891.6103 169793454 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 902.8653 684.7371 781.1698 758.8175 579.5711 489.4117 1537.751 497.7343 653.4606 1203.1762 821.9085 36785525 fnr Stress Oxygen stress Photorhabdus luminescens subsp. laumondii TTO1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Photorhabdus;species:Photorhabdus luminescens; 428.5868 438.7448 519.716 439.5735 460.3077 378.6877 109624837 nirA Nitrogen Assimilatory N reduction Haloquadratum walsbyi DSM 16790 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloquadratum;species:Haloquadratum walsbyi; 529.4206 392.1894 588.884 416.6343 516.057 490.5284 530.5962 427.2271 84517059 dehH109 Organic Remediation Chlorinated solvents Loktanella vestfoldensis SKA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Loktanella;species:Loktanella vestfoldensis; 1256.3362 1766.2966 1189.4899 1420.1731 2288.1924 1753.2358 1313.713 1624.4675 1615.3833 1411.7678 23466089 pcc Carbon cycling Carbon fixation Bifidobacterium longum NCC2705 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium longum; 2506.104 2387.7382 1393.3334 1534.7529 2547.6497 2657.508 1048.895 1741.4054 2907.8541 1926.2795 1122.7431 225020062 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium matruchotii; 1297.7883 588.7443 876.6583 955.0188 569.965 439.242 596.5712 434.0175 383.3784 20904964 pstS Stress Phosphate limitation Methanosarcina mazei Go1 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanosarcinales;family:Methanosarcinaceae;genus:Methanosarcina;species:Methanosarcina mazei; 1313.5578 1195.7359 1483.4783 1445.582 1581.0167 1392.2659 1070.3099 1301.7056 1202.1702 1410.8697 2266.0967 1535.1667 313682156 fccAB Sulphur sulfide oxidation Sulfuricurvum kujiense DSM 16994 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Helicobacteraceae;genus:Sulfuricurvum;species:Sulfuricurvum kujiense; 1068.4318 956.4052 1078.2919 1119.2385 1387.4019 887.7454 957.7525 899.4322 837.1508 936.2286 2084.0142 1084.4298 163811757 rd Organic Remediation Chlorinated solvents Dehalococcoides sp. VS superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides; 2764.1611 2117.8891 2207.5592 2713.3934 2348.4377 2128.6013 2759.6335 2357.6157 2297.2634 2449.8856 2218.2157 2871.6264 113460780 TerZ Metal Resistance Tellurium Haemophilus somnus 129PT superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Histophilus;species:Histophilus somni; 2913.922 2744.5043 5218.9629 2658.6485 2524.5759 2664.1785 2140.2871 2012.65 2368.9277 2313.4762 1916.4666 2121.2267 219953464 pcc Carbon cycling Carbon fixation Anaeromyxobacter dehalogenans 2CP-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter;species:Anaeromyxobacter dehalogenans; 1233.367 843.8799 505.8013 931.6372 634.4429 1397.0369 1384.7318 1609.6625 708.1854 1107.9351 9760.1703 724.9169 217330007 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 2569.5447 826.7242 848.9169 2378.2875 1506.6574 768.7083 1195.1404 837.8456 989.7752 1196.9094 2843.6482 807.0364 152984807 pilin virulence pilin Pseudomonas aeruginosa PA7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 1386.6698 1067.4693 1801.3405 1319.4141 1547.2877 1303.0666 1110.146 1179.8882 968.7488 1180.9525 2212.0654 1419.8836 14524222 B_lactamase_A Antibiotic resistance Beta-lactamases Sinorhizobium meliloti 1021 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium meliloti; 3233.651 2877.5629 3885.443 2307.8138 2233.6229 2982.1348 2753.0109 3997.6418 3686.3708 3181.0025 2876.7781 3046.8066 153891498 CadA Metal Resistance Cadmium Opitutaceae bacterium TAV2 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae; 9686.7863 13116.722 8435.7271 9425.3141 8572.573 9879.1317 7490.1708 8740.4441 7768.365 7934.4473 15476.097 10561.5066 210634504 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Collinsella stercoris DSM 13279 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Coriobacteriales;family:Coriobacteriaceae;genus:Collinsella;species:Collinsella stercoris; 652.303 552.7862 747.5767 1379.875 803.736 602.5311 768.7829 816.5438 966.445 698.933 145238806 cellobiase_fungi Fungi function carbon degradation Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 5638.2874 4402.3107 5259.4844 6341.1733 2840.2901 5603.9715 6186.8114 3894.1745 5685.1818 5916.722 6546.272 4616.2663 145961422 gyrB other category gyrB Vibrionales bacterium SWAT-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales; 2338.8047 1911.4725 1875.4192 2471.1157 1749.9462 1935.6876 2370.2652 2417.8769 1568.6807 2321.4044 2173.602 1654.5008 49061 nhh Organic Remediation Aromatics Nitoaromatics Rhodococcus rhodochrous superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 2307.4135 2714.8141 3186.9098 1326.4135 1772.5649 1309.5277 1770.0052 5819.1048 1855.5824 1614.5569 3208.3176 2308.2155 110598809 dsrA Sulphur sulfite reductase Chlorobium ferrooxidans DSM 13031 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium ferrooxidans; 1120.2466 1114.2245 1838.2999 1102.2793 1691.8731 1076.1569 1000.6856 1254.439 1118.2418 2439.4342 1832.6643 84499364 phn Organic Remediation Herbicides related compound Oceanicola batsensis HTCC2597 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola batsensis; 1869.0639 2405.8581 1946.5899 2107.4875 1893.4509 2212.6183 1856.6972 1990.4266 2116.2856 2345.4457 2056.9625 2918.3987 83841061 pcc Carbon cycling Carbon fixation Sulfitobacter sp. NAS-14.1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sulfitobacter; 19489.4709 10395.4785 15603.1798 18705.5728 12002.7511 12890.2113 10917.2824 9019.6197 12740.6747 12961.8807 21448.8537 12819.271 218758457 type_III_secretion virulence secretion Desulfovibrio vulgaris str. 'Miyazaki F' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 2747.6839 2740.3502 1136.5661 2675.2225 1954.2352 1741.914 1451.5688 1527.5713 1776.1599 1552.7171 4044.6381 1591.9912 191161439 cytochrome Energy process Energy process Geobacter sp. M21 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 988.3887 1279.6074 1515.8722 1407.5303 1211.5712 1267.2612 1148.3304 1307.213 1183.5552 971.3583 1653.5174 1377.9039 115368281 linB Organic Remediation Pesticides related compound Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 1339.3612 1265.8454 1092.8604 1042.2584 1295.998 1290.608 1173.8631 1232.2755 1059.4358 1113.4402 1124.095 1296.2925 84366045 pcaG Organic Remediation Aromatics Other aromatics Xanthomonas oryzae pv. oryzae MAFF 311018 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas oryzae; 4684.2853 4246.9408 5024.0465 6086.9883 3138.6563 5924.3501 4856.3912 4499.5212 3345.1202 9176.5771 5947.723 3203.8393 19171194 phenol_oxidase Carbon cycling Carbon degradation Lignin Gaeumannomyces graminis var. tritici superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Gaeumannomyces;species:Gaeumannomyces graminis; 2298.6287 3102.9651 2543.1741 1757.0637 2949.8004 2189.6753 2161.3579 1800.7042 1754.3182 1766.376 3424.5871 2081.0688 163760282 gyrB other category gyrB Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 7809.5645 11934.7452 9725.5782 10636.1692 6143.4773 11328.8646 10538.3557 8921.9867 10672.6273 9937.6376 8628.9168 6886.9788 94496003 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Sphingomonas sp. SKA58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 2559.0823 1692.789 1925.6884 2517.7284 3083.7495 2156.6219 1704.6708 2413.1683 1880.0684 1881.3346 4228.2341 2998.4583 110817664 alkK Organic Remediation Others Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1601.4656 1028.7829 1325.2014 2033.9455 1413.3765 1046.0727 862.2514 787.0077 1421.9973 1633.9307 1861.7146 942.8813 211592468 cellobiase_fungi Fungi function carbon degradation Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 1971.109 1432.4034 1271.8124 2180.1665 1066.6635 1309.2884 1202.3896 1038.8492 1302.5724 1069.0424 992.8167 928.1969 197119647 TerC Metal Resistance Tellurium Geobacter bemidjiensis Bem superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter bemidjiensis; 1991.6067 1991.9035 1981.8773 937.4586 1466.8614 1174.7117 959.8057 3133.2394 1611.5372 1668.6807 2382.7602 1285.2792 119387117 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 449.407 1233.0206 554.0914 1022.5315 1207.7538 722.508 1301.9084 976.1264 48728360 B_lactamase_C Antibiotic resistance Beta-lactamases Laribacter hongkongensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Laribacter; 3403.9053 1492.2934 1989.2052 2621.1584 1465.8375 672.9133 1390.1916 1243.7866 796.962 1222.3242 3250.1201 1375.9264 259123929 chitinase_Oomycetes soil_borne_pathogen oomycete carbon degradation Aphanomyces invadans superkingdom:Eukaryota;order:Saprolegniales;family:Saprolegniaceae;genus:Aphanomyces; 1681.3207 756.7613 1698.2992 1675.7278 775.4661 667.1371 984.9791 804.9415 1024.6222 722.0834 712.1733 156934815 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Enterobacter sakazakii ATCC BAA-894 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Cronobacter;species:Cronobacter sakazakii; 901.2669 646.6481 689.666 993.5089 968.8875 879.6391 642.3213 486.3524 647.7857 759.0394 1010.0663 146302966 ferredoxin_oxidoreductase Bioleaching Electron transport Metallosphaera sedula DSM 5348 1703.6048 1520.4799 1468.4299 1723.4774 1949.2678 1792.1821 1242.3977 1108.0735 1304.3663 1294.7052 2491.7358 1727.5844 17742859 norB Nitrogen Denitrification Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 10892.814 5326.2862 7634.6693 10747.9684 6633.1073 7378.909 6036.7235 6635.4775 8496.0119 7619.9293 10689.8194 6422.1113 90954623 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1631.7286 814.9068 921.3672 1230.0213 1250.6982 591.671 1046.2517 77687829 CODH Carbon cycling Carbon fixation Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 891.1389 2536.2017 1630.6033 1581.3792 1361.6359 2603.8 1789.8946 2007.2515 2153.6204 2632.055 888.4538 2208.4363 295674267 protease_serine_fungi Fungi function carbon degradation Paracoccidioides brasiliensis Pb01 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Paracoccidioides;species:Paracoccidioides brasiliensis; 7819.3432 6122.1734 8343.8909 7426.7295 6823.0818 6007.4174 5851.984 10586.0941 7402.0953 6856.7472 9089.6607 7891.0606 8515797 nahA Organic Remediation Aromatics Polycyclic aromatics uncultured bacterium superkingdom:Bacteria; 2754.1112 1852.2706 2985.6252 2873.6312 1458.4244 1833.6035 2826.4648 2489.1589 2238.8324 2488.7001 1913.7759 2492.1878 75704252 nmoA Organic Remediation Aromatics Nitoaromatics Anabaena variabilis ATCC 29413 superkingdom:Bacteria;phylum:Cyanobacteria;order:Nostocales;family:Nostocaceae;genus:Anabaena;species:Anabaena variabilis; 1716.2178 1667.083 2003.7737 1098.3634 1732.0294 1329.8084 1209.2602 3162.9069 1316.9705 1459.7341 2604.7475 1575.9655 218521602 CadA Metal Resistance Cadmium Methylobacterium chloromethanicum CM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium chloromethanicum; 3635.2363 3953.1357 4104.1478 3517.6888 4141.7674 3675.5077 2702.7871 2903.1129 2887.0607 3112.86 4809.6776 3920.4894 149123832 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 1498.4265 1254.6575 1311.985 1308.8396 1767.1235 1397.4707 849.7511 1300.0352 901.5228 998.1019 1545.5747 1656.4233 167644017 iro virulence Iron oxidation Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 917.117 1311.5275 1518.4312 1110.1433 1636.2269 1280.4527 896.5474 1790.3672 1290.0848 1527.9053 1097.684 1498.927 189467259 B_lactamase_A Antibiotic resistance Beta-lactamases Bacteroides intestinalis DSM 17393 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides intestinalis; 1678.5805 1817.0629 1503.7608 1596.4739 4720.4883 15612.4754 3505.2901 1102.9655 2047.4636 1568.3837 1270.9495 1310.4368 13476196 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mesorhizobium loti MAFF303099 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium loti; 2082.1807 1313.8849 1440.3832 1653.4008 1221.487 1349.1319 1342.1772 1112.6368 1593.7376 1328.8298 841.1013 1522.6565 57335580 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 5727.2226 5509.3202 7547.3695 2756.5721 5177.3373 10564.03 5100.0876 8310.6604 7880.2958 5711.8623 2772.3191 8055.9999 13873324 rubisco Carbon cycling Carbon fixation Allochromatium vinosum superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Chromatiaceae;genus:Allochromatium; 2461.6162 4888.006 5476.0792 1865.6851 2897.1877 4265.279 3876.4093 5180.4108 4849.3357 4735.4009 1801.3648 5213.0055 126207853 MATE_antibiotic Antibiotic resistance transporter Actinobacillus pleuropneumoniae L20 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Actinobacillus;species:Actinobacillus pleuropneumoniae; 516.139 699.1354 681.8706 390.4237 71556551 pbrT Metal Resistance Lead Pseudomonas syringae pv. phaseolicola 1448A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas savastanoi; 3888.1934 1574.4319 2081.5455 3635.1176 1716.3309 2186.9682 1759.9344 2122.46 1674.4647 2290.786 3001.1294 2827.9712 189211761 Cyanide_hydratase_Fungi soil_borne_pathogen fungi virulence Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 914.7932 1021.182 1741.4087 868.8546 1806.5025 824.5252 1786.5797 834.3899 1240.2739 1093.4969 1531.9048 1069.5714 71906844 ppx Phosphorus Phosphorus utilization Dechloromonas aromatica RCB superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Dechloromonas;species:Dechloromonas aromatica; 446.4653 619.9568 466.2303 510.7534 270330411 iro virulence Iron oxidation Acidovorax avenae subsp. avenae ATCC 19860 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax avenae; 4827.5811 3860.4336 4944.7773 5161.6383 2852.1967 3250.0462 3073.6196 4775.1113 3826.2096 4294.4602 3146.8627 4557.6292 121554384 tomA Organic Remediation Aromatics BTEX and related aromatics Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 1242.9308 2053.6284 2325.3581 2117.1168 841.1573 2664.687 2433.4088 1627.2258 1881.8507 2107.6004 1197.6986 4742.7961 184199816 pimF Organic Remediation Aromatics Aromatic carboxylic acid Kocuria rhizophila DC2201 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Kocuria;species:Kocuria rhizophila; 4316.8717 2576.4045 2974.4589 4233.6036 1797.2881 3055.2555 4959.3364 4677.8293 3326.878 4383.9034 2626.8021 3008.7576 163739500 mer Metal Resistance Mercury Phaeobacter gallaeciensis BS107 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 3535.9179 6022.7305 3411.9811 3273.8728 8303.613 3785.3916 8094.4708 3477.848 6196.7332 3182.2818 3720.5702 2729.1944 154160049 sigma_24 Stress Sigma factors Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 1410.7002 591.1399 1078.8589 1172.8643 1016.269 931.1037 1612.8287 659.9976 883.5835 895.7614 1423.1382 119716315 fnr Stress Oxygen stress Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 5131.5405 2295.7497 3557.7685 4889.8109 2734.7613 2825.512 2803.5989 2555.6598 2790.7007 2811.0978 4150.1061 4151.6597 157679479 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 5921.9238 2649.7124 3786.7945 4104.9564 3235.1604 2544.3487 2948.9152 3106.1742 2843.6568 3170.4677 5641.097 3725.6686 238788129 ppk Phosphorus Phosphorus utilization Yersinia frederiksenii ATCC 33641 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia frederiksenii; 990.6722 842.7161 905.0248 919.5422 1120.8119 991.2728 545.2158 878.2618 709.0009 629.0173 1499.856 1175.2556 144898098 ahpF Stress Oxygen stress Magnetospirillum gryphiswaldense MSR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum gryphiswaldense; 8119.5954 3871.9274 6998.3197 4529.7715 3811.3217 6475.4594 5291.3651 6264.8689 4858.9694 6515.7573 3367.6007 6470.2432 ieghzo65 hzo Nitrogen Anammox 2288.9306 1059.3469 1618.39 714.8475 1047.3222 1583.2694 995.6057 197789916 nitA Organic Remediation Aromatics Other aromatics Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 4356.1074 2322.2733 3086.234 3906.356 2543.3838 2670.4182 2261.5964 3241.4816 2828.8627 2413.1865 4427.2539 2586.1427 146293063 CadA Metal Resistance Cadmium Shewanella putrefaciens CN-32 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella putrefaciens; 1745.9703 619.0843 1632.3752 1749.3589 1163.0159 1566.9065 1372.879 1876.0576 1510.6879 1562.426 2661.1213 2940.7824 297374555 sped_fungi soil_benifit Schizophyllum commune superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Schizophyllaceae;genus:Schizophyllum; 1262.2666 1887.7586 1487.2803 1062.1815 915.063 2172.685 1058.7307 2129.5289 2081.9329 1180.8239 827.7436 1404.8604 15073307 grpE Stress Heat shock Sinorhizobium meliloti 1021 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium meliloti; 7040.3103 6509.9931 4447.934 7558.0614 8146.5522 5621.246 8221.2742 3680.9577 5472.6004 5411.5071 6740.5349 5359.667 46580730 merP Metal Resistance Mercury Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 908.4666 1418.3611 1770.6622 625.5787 892.3305 1274.6197 1287.5712 1861.6492 1049.0333 1532.517 1486.4031 126716069 sigma_70 Stress Sigma factors Roseobacter sp. CCS2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 3839.0177 2908.5774 3556.5908 3528.14 6050.1774 2105.6509 5384.0102 2999.6687 2753.1562 3114.066 2929.7523 3119.3716 76057469 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 6103.0046 3107.2211 4732.4135 5608.2872 3617.1192 3347.5014 3253.163 3549.8442 3385.2158 3484.0886 7442.9663 4754.4824 120594350 nahA Organic Remediation Aromatics Polycyclic aromatics Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 1121.8185 2660.6583 1915.9988 1492.0029 2682.9639 1643.509 2220.7451 1589.2002 2148.0115 1748.6437 2353.7144 1826.7938 126705740 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Rhodobacterales bacterium HTCC2150 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 684.7785 1005.566 543.6604 675.8496 1088.1257 1002.4751 932.3345 492.7677 998.7565 733.1109 909.4514 803.9878 85694315 ppx Phosphorus Phosphorus utilization Idiomarina baltica OS145 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Idiomarinaceae;genus:Idiomarina;species:Idiomarina baltica; 2920.2889 2826.6428 2452.6222 3307.3085 2594.0626 2930.2808 2746.4198 2059.6388 2683.4956 3554.4707 2693.2061 2866.5728 56679031 proV Stress Osmotic stress Ruegeria pomeroyi DSS-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria pomeroyi; 2503.3101 4788.4739 3901.2348 3200.9472 3862.6451 4708.6133 3659.5991 3236.392 3829.7509 4463.8329 2996.1563 5406.7415 229322481 iro virulence Iron oxidation Rhodococcus erythropolis SK121 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus erythropolis; 1315.4114 1239.4205 958.0479 1266.553 86566820 alkB Organic Remediation Other Hydrocarbons Frankia sp. CcI3 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 5222.813 4088.2832 3906.2509 5161.6109 2390.987 4452.2925 3600.1718 3197.9246 3432.0446 3782.1993 2328.7288 2997.2499 154351567 catB Organic Remediation Aromatics BTEX and related aromatics Bacillus amyloliquefaciens FZB42 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus amyloliquefaciens; 2314.143 734.9032 987.5219 2242.4629 968.2808 1291.625 2098.2832 2086.7161 900.8006 2128.3248 1075.6686 119715861 trzN Organic Remediation Herbicides related compound Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 7141.1062 4790.5382 6269.9787 7811.808 4447.6227 4389.1022 4501.0206 5837.4791 5432.8542 6782.4345 3875.1205 5324.7593 110589340 fnr Stress Oxygen stress Endoriftia persephone 'Hot96_1+Hot96_2' superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;genus:Endoriftia;species:Endoriftia persephone; 2552.6066 2347.013 2433.1102 2369.8499 2629.8393 2682.7243 2013.2085 2506.9401 2033.7063 2273.8018 3679.1998 2735.374 213025338 TehB Metal Resistance Tellurium Salmonella enterica subsp. enterica serovar Typhi str. 404ty superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 857.6571 726.3129 1366.7407 589.0528 875.3167 877.1398 1191.6898 1004.5577 1012.462 1312.9498 94471083 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 11989.9909 5576.6391 12722.2825 11667.1408 8510.3478 6752.0162 7580.9258 5993.9268 7785.2171 8265.6963 10014.4638 7975.4185 4220431 phdCI Organic Remediation Aromatics Polycyclic aromatics Ralstonia sp. U2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 2168.322 924.8164 1032.8996 1463.2655 1098.2311 949.3504 1886.8639 1267.4505 1169.8211 1231.5924 938.4971 1955.665 150864009 phospholipase_B_fungi Fungi function virulence Scheffersomyces stipitis CBS 6054 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Debaryomycetaceae;genus:Scheffersomyces;species:Scheffersomyces stipitis; 683.3413 1116.129 872.4418 809.7566 1387.819 1217.038 894.586 841.7553 824.4535 922.3487 712.3534 1054.9877 55981191 pilin virulence pilin Thermus thermophilus HB8 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Thermus;species:Thermus thermophilus; 2582.1845 2494.0494 2718.1277 2582.3807 2394.9685 2537.424 3064.9366 3723.6982 2165.9566 2313.0072 3357.3422 2267.3893 46578420 gyrB other category gyrB Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 4534.8645 1948.8974 2919.6305 3689.1544 2505.2562 2662.6081 3360.3982 2546.4242 2603.3742 2884.8746 31551.1563 1592.0461 310762266 sped_bac soil_benifit Achromobacter xylosoxidans A8 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Achromobacter;species:Achromobacter xylosoxidans; 5914.6569 2539.5148 3597.185 5871.3482 3977.521 2925.3104 3083.2775 2979.0188 2328.5874 2768.6653 8512.3254 2808.9519 119953556 obgE Stress Radiation stress Borrelia turicatae 91E135 superkingdom:Bacteria;phylum:Spirochaetes;class:Spirochaetes;order:Spirochaetales;family:Spirochaetaceae;genus:Borrelia;species:Borrelia turicatae; 1301.2269 975.6722 951.5397 1373.2202 744.5634 813.6635 772.4384 852.3061 788.1392 1332.5485 1071.6725 115397435 lactase_fungi Fungi function carbon degradation Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 752.625 474.7007 438.0939 362.4523 494.2829 34103352 ZntA Metal Resistance Zinc Chromobacterium violaceum ATCC 12472 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Chromobacterium;species:Chromobacterium violaceum; 1218.0407 1460.6791 1187.258 1108.479 2564.5237 1540.9015 1015.0521 965.1886 1456.0603 1432.3983 1264.9074 1372.4521 84687811 glnA Stress Nitrogen limitation Rhodobacterales bacterium HTCC2654 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Maritimibacter;species:Maritimibacter alkaliphilus; 4353.5866 3039.5454 5482.7237 7678.2161 4017.0516 4164.0549 3965.4756 3717.6457 4102.4525 4911.8643 8319.9364 4625.3846 4416539 cat_fun soil_benifit Pleurotus ostreatus superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Pleurotaceae;genus:Pleurotus; 531.6906 895.4831 522.0393 967.0501 722.3139 665.3306 928.6035 680.5076 682.0356 535.3538 238872912 phoB Stress Phosphate limitation Eubacterium eligens ATCC 27750 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Eubacteriaceae;genus:Eubacterium;species:Eubacterium eligens; 2516.0036 2122.8471 675.1846 2026.7543 1111.5217 738.1227 1136.2408 970.0727 716.7241 909.2282 1686.9116 1000.6076 119497741 amyA_fungi Fungi function carbon degradation Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 539.4307 439.0648 159891207 sigma_24 Stress Sigma factors Herpetosiphon aurantiacus ATCC 23779 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Herpetosiphonales;family:Herpetosiphonaceae;genus:Herpetosiphon;species:Herpetosiphon aurantiacus; 3305.1914 4855.4233 3830.1948 4921.9042 6717.136 3127.644 3444.18 3273.0195 2257.895 1853.5353 8621.8536 3157.6437 283807698 cat_bac soil_benifit Kribbella flavida DSM 17836 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Kribbella;species:Kribbella flavida; 3494.6674 1316.0766 4204.9501 12245.7332 1420.3536 1968.9504 1538.536 3387.1749 2404.655 1828.4503 1770.8295 3694.9768 89950257 obgE Stress Radiation stress Saccharophagus degradans 2-40 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Saccharophagus;species:Saccharophagus degradans; 622.6944 499.0113 412.8031 403.5879 335.6411 1042.7879 76803672 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 1039.3509 983.5596 973.8111 1233.106 766.7191 1005.2622 816.1478 794.772 606.6245 15788845 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 519.1344 571.2488 837.0557 572.1037 480.9581 621.9833 831.4762 722.3477 121604928 proO Organic Remediation Aromatics Other aromatics Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 1738.7437 1213.7794 1706.6884 1935.2548 1008.5335 1750.5138 1962.7165 1894.0403 1481.5583 1805.2911 1503.4357 1746.5899 83944505 pnbA Organic Remediation Aromatics Nitoaromatics Sulfitobacter sp. EE-36 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sulfitobacter; 1012.2244 951.5803 907.1734 886.5639 670.1613 763.3602 751.2283 646.7383 647.7802 160360816 atzA Organic Remediation Herbicides related compound Petrotoga mobilis SJ95 superkingdom:Bacteria;phylum:Thermotogae;class:Thermotogae;order:Thermotogales;family:Thermotogaceae;genus:Petrotoga;species:Petrotoga mobilis; 849.6868 723.4841 1100.6536 826.0018 1088.8334 698.8326 607.0847 787.2377 645.3627 539.6857 1216.9421 1168.925 151576229 phtA Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia pickettii 12D superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 1205.3606 2756.941 1790.4504 1399.9053 1145.7627 2277.02 2521.5804 1832.0059 2965.097 3052.8961 2261.2097 59939266 necrosis_Oomycetes soil_borne_pathogen oomycete virulence Phytophthora megakarya superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 1258.3242 1238.9162 1319.909 1595.6932 786.3833 1116.2925 1137.5713 977.0206 1293.0669 1262.4676 1427.3257 1268.1 118683524 bco Organic Remediation Aromatics Aromatic carboxylic acid Geobacter lovleyi SZ superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter lovleyi; 2578.6787 2414.727 3863.752 1456.1839 1409.0916 2431.698 2246.4441 4558.8443 2730.732 2422.9521 1618.0811 3242.949 15224717 pbrA Metal Resistance Lead Arabidopsis thaliana superkingdom:Eukaryota;kingdom:Viridiplantae;phylum:Streptophyta;order:Brassicales;family:Brassicaceae;genus:Arabidopsis; 2258.8467 2682.5118 3057.1159 3374.4127 1650.9584 3974.11 4090.9599 3170.7747 2835.9801 2567.0998 2778.9019 2001.9018 52785071 sir Sulphur sulfite reductase Bacillus licheniformis ATCC 14580 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus licheniformis; 2563.2584 1017.5185 1647.3237 2172.4411 25678.9019 1972.0015 1631.3302 1860.9593 1822.8955 1767.3698 1968.3838 1758.5234 111020357 arsB Metal Resistance Arsenic Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1404.078 538.6461 1235.8729 650.9826 1171.8558 3069.0867 567.6061 425.2071 778.5692 6599004 helicase_family_4 Bacteria phage REPLICATION Bacteriophage phiYeO3-12 superkingdom:Viruses;order:Caudovirales;family:Podoviridae;genus:T7-like viruses; 1299.924 854.6517 1467.8919 1196.6911 1431.3785 1337.3763 1228.7367 1228.5655 978.5281 1322.9228 1747.6818 1563.2631 218765230 spe soil_benifit Desulfurococcus kamchatkensis 1221n superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Desulfurococcales;family:Desulfurococcaceae;genus:Desulfurococcus;species:Desulfurococcus kamchatkensis; 1220.7809 990.173 1165.8559 1138.1616 1568.8352 1268.5774 742.6456 1108.6908 879.6403 1126.4436 1901.8957 1326.9569 126013316 mcrA Carbon cycling Methane Methane production uncultured archaeon superkingdom:Archaea; 499.7649 1394.3541 718.963 790.6074 1364.2334 984.049 843.3829 1565.2035 917.7731 1178.8867 987.4932 18034320 dsrB Sulphur sulfite reductase Syntrophobacter fumaroxidans superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Syntrophobacterales;family:Syntrophobacteraceae;genus:Syntrophobacter;species:Syntrophobacter fumaroxidans; 6125.3828 4960.7787 5654.7694 2882.2469 2671.7588 5294.3614 4361.5999 6064.6521 5302.7356 4834.6707 1949.2602 6108.5743 116617829 glnA Stress Nitrogen limitation Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Leuconostocaceae;genus:Leuconostoc;species:Leuconostoc mesenteroides; 452.4561 480.3852 1249.0732 1098.7102 364.3544 349.588 91697199 AceA Carbon cycling Carbon degradation Others Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 1502.7248 448.5263 562.4182 1390.5453 554.6947 534.3406 631.4073 487.6347 475.9141 1443.7345 688.5674 166860528 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 2508.1591 2279.229 2717.8515 2740.1625 1636.881 2246.427 3410.07 2752.1364 2388.894 2187.1725 1969.0445 2103.4868 117928667 exochitinase Carbon cycling Carbon degradation Chitin Acidothermus cellulolyticus 11B superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Acidothermaceae;genus:Acidothermus;species:Acidothermus cellulolyticus; 951.7924 1798.9366 1381.2148 1055.9217 1616.4331 1452.0013 1556.9269 1425.0784 1363.7253 1680.7848 1089.6359 1716.3513 111150285 linC Organic Remediation Pesticides related compound Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 5402.0401 2270.099 3268.7526 5088.2196 2881.3375 2288.1326 3418.5981 1713.2266 2149.4035 2743.1277 3109.5525 2794.8762 148830707 MATE_antibiotic Antibiotic resistance transporter Erythrobacter sp. SD-21 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 7789.3982 1933.619 1577.2289 1474.018 3168.7261 1665.0686 1789.2867 2630.5731 2004.7121 2025.4265 2019.0517 1808.0285 86571836 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris HaA2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 5190.6829 4561.478 5187.3977 4496.5961 2957.0998 4724.0632 3747.5642 8515.4405 3684.6751 4449.3277 8085.24 4998.3689 27383039 alkK Organic Remediation Others Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 1576.7502 993.7537 1418.5449 1417.5842 717.7322 1862.3719 2239.6078 720.0711 1520.6754 2303.4822 1349.9184 925.7251 56692272 nifH Nitrogen Nitrogen fixation Heliobacterium gestii superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Heliobacteriaceae;genus:Heliobacterium; 879.9498 1084.2895 1343.8992 724.7223 715.495 637.8361 719.1145 1476.7939 890.037 885.9461 963.2183 1184.5799 196477453 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Phenylobacterium zucineum HLK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Phenylobacterium;species:Phenylobacterium zucineum; 5394.2225 4524.4736 3058.4292 5745.6186 6401.8578 5847.9534 3501.9293 3930.2815 4502.8614 4818.6915 7845.8829 5926.3735 118729863 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 3166.0462 1953.1661 1532.7526 3232.9994 2378.3789 13864.6566 2688.3231 1206.2513 1078.5401 1583.8604 1506.679 1733.7777 169761077 nitro Organic Remediation Others Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1867.0893 3826.6913 3588.6504 1962.1293 4393.0002 2988.5056 3155.4482 2869.923 2751.9098 2111.4193 2072.05 2816.5047 19909719 gyrB other category gyrB bacterium PC3 superkingdom:Bacteria; 1708.1449 779.2857 820.405 1482.3461 934.3053 952.895 700.6244 1133.7225 749.178 1079.148 2174.7792 1162.7042 161167869 nitA Organic Remediation Aromatics Other aromatics Sorangium cellulosum 'So ce 56' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Polyangiaceae;genus:Sorangium;species:Sorangium cellulosum; 3479.6836 6146.5499 4893.402 3643.7197 4082.2558 3989.5449 4305.5564 5054.2238 4594.2939 4244.2893 8667.7758 4797.5058 182413555 nirA Nitrogen Assimilatory N reduction Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 5692.6983 6146.5977 5948.2453 5043.9937 6457.4614 5829.6357 6504.703 9515.0163 5779.1654 5559.4291 7147.0232 5630.2594 119369952 gyrB other category gyrB uncultured bacterium superkingdom:Bacteria; 2200.3043 1446.9936 1978.2279 1839.9337 2523.4194 3439.4826 2585.0108 1726.1298 1734.6548 1450.9461 3586.8733 2089.8575 110823168 chnB Organic Remediation Other Hydrocarbons Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 2130.4967 1247.9804 1716.6771 2091.749 1780.4521 1521.4433 1350.5161 1320.9756 1654.1606 1944.3245 1505.0213 1863.9603 145235793 chnB Organic Remediation Other Hydrocarbons Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 6158.4397 2916.3759 4331.7344 4840.1848 1711.5531 1822.2342 2739.4574 3405.2708 2792.0054 3797.3298 2626.0093 2916.1466 255936373 ABC_multidrug_fungi Fungi function metal resistance Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 622.6138 798.5759 841.5745 807.4554 1795.6387 802.0459 912.3075 1317.2717 947.6643 1225.1717 775.6717 88703340 trzN Organic Remediation Herbicides related compound gamma proteobacterium KT 71 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;genus:Congregibacter;species:Congregibacter litoralis; 592.0722 518.9819 238934847 sir Sulphur sulfite reductase Lachancea thermotolerans superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Lachancea; 3427.479 2309.397 1987.7803 3060.4928 3300.5708 2007.4778 2373.8095 2045.4284 1629.6396 2078.9807 3883.9856 2888.627 212559334 gyrB other category gyrB Anoxybacillus flavithermus WK1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Anoxybacillus;species:Anoxybacillus flavithermus; 1980.9146 1235.6966 1124.8037 1833.0028 807.4283 1486.1016 2189.5862 1992.7748 1233.1448 1393.7069 1154.1179 1350.3568 229327079 AceA Carbon cycling Carbon degradation Others Bacillus coagulans 36D1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus coagulans; 1153.4314 1033.3957 1224.879 1625.2524 701.4258 1137.2761 965.7842 1621.5852 1158.8595 960.1302 1196.3292 1498.8172 189204542 sidA Fungi function iron Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 1925.9496 1580.2043 1551.3631 2584.8462 1210.2061 1318.4566 1390.3866 929.245 1598.1758 1812.3818 1442.221 1233.7142 259164644 AceA Carbon cycling Carbon degradation Others Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 1472.6365 921.8023 631.654 525.522 855.0552 963.8098 16472.3556 978.1003 24981461 katE Stress Oxygen stress Pseudomonas putida KT2440 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 5496.496 5994.7861 6187.9469 6578.7979 7912.0417 6550.4802 5801.9852 4397.228 5663.6779 20355.0185 5006.3189 5066.7834 116494837 obgE Stress Radiation stress Lactobacillus casei ATCC 334 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus casei; 682.7676 581.3341 653.413 576.6912 450.8946 372.0102 917.4515 229766497 endochitinase Carbon cycling Carbon degradation Chitin Streptosporangium roseum DSM 43021 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptosporangiaceae;genus:Streptosporangium;species:Streptosporangium roseum; 2070.1722 1755.1978 2656.2041 2429.6487 1503.3016 2283.9448 3354.6631 1868.004 3430.8696 1892.7914 2257.8082 2034.8045 115402429 endoglucanase Carbon cycling Carbon degradation Cellulose Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 1043.582 1078.1986 991.2876 868.4231 1126.2723 758.9269 841.2724 734.8141 801.0974 743.4064 1894.5483 1004.9882 99081811 nhh Organic Remediation Aromatics Nitoaromatics Silicibacter sp. TM1040 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 1343.4446 781.8577 1122.1139 1520.3842 1361.9962 1009.0708 1159.1697 959.1547 996.1937 872.9707 922.3765 800.6783 15966345 atzA Organic Remediation Herbicides related compound Sinorhizobium meliloti 1021 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium meliloti; 1303.3492 1925.3874 939.3816 1293.6079 716.3469 2034.3393 1800.5963 870.164 1586.8065 1689.3387 1070.8073 99030581 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 2265.4375 3173.2658 2823.7862 2489.3608 3177.8267 2475.8489 2257.272 2710.1224 2743.2546 3463.9555 2031.6406 3217.7914 124516097 APS_AprA Sulphur adenylylsulfate reductase Leptospirillum rubarum superkingdom:Bacteria;phylum:Nitrospirae;class:Nitrospira;order:Nitrospirales;family:Nitrospiraceae;genus:Leptospirillum; 2606.8194 2257.3564 2893.6193 2253.2565 2488.7614 2205.8132 1920.7699 3486.8415 2152.106 2100.4315 4626.0335 2551.0172 254389458 AceB Carbon cycling Carbon degradation Others Streptomyces clavuligerus ATCC 27064 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces clavuligerus; 4495.9645 2609.8665 3414.7581 4570.234 3810.5443 3712.9284 3659.7711 4033.9183 3157.7471 4114.6915 4300.0917 4070.735 157741864 rubisco Carbon cycling Carbon fixation Mycobacterium sp. DSM 3803 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 817.3822 789.0036 1140.0369 1080.7822 540.5314 628.0793 621.2356 256392627 phzF soil_benifit Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 1201.519 607.4181 883.4493 499.6775 521.2342 659.19 830.8173 691.8605 631.1778 157963799 silP Metal Resistance Silver Shewanella pealeana ATCC 700345 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella pealeana; 8698.0841 7055.1706 6047.1077 4112.2709 6973.0897 8201.8937 7530.7321 5117.2386 4691.9469 5682.2935 5487.748 4325.5113 160880408 mannanase Carbon cycling Carbon degradation Hemicellulose Clostridium phytofermentans ISDg superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium phytofermentans; 1623.9244 1191.6328 1229.1681 1491.8111 1776.9825 1318.6809 1268.0222 1106.851 905.6932 1141.7248 1722.492 1354.7786 85094386 nmoA Organic Remediation Aromatics Nitoaromatics Neurospora crassa OR74A superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Sordariaceae;genus:Neurospora;species:Neurospora crassa; 1503.6382 747.593 1431.296 1224.0793 642.5277 1318.7968 775.2018 858.5771 1107.9907 1537.5424 218891360 mer Metal Resistance Mercury Pseudomonas aeruginosa LESB58 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 1198.7922 1159.6617 1085.2272 1592.7756 1465.4204 1401.5986 944.3209 952.7273 1111.9842 951.0465 1396.382 1172.1658 120405632 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 4362.7699 1835.7945 3538.3147 4490.8431 2832.6684 3110.3096 2792.0369 3357.8947 3038.0426 3321.2371 2900.8267 4407.8504 114800512 TerC Metal Resistance Tellurium Hyphomonas neptunium ATCC 15444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Hyphomonas;species:Hyphomonas neptunium; 5989.6897 2034.1833 2676.6757 4362.0453 3915.8266 1695.2803 2376.7918 1772.5255 2131.9301 2181.0644 4721.8676 1804.7602 145301190 iro virulence Iron oxidation Aeromonas salmonicida subsp. salmonicida A449 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas;species:Aeromonas salmonicida; 3807.0489 2665.0545 1824.5455 3367.0297 2437.9119 1911.4884 1724.4799 2354.0873 2329.1466 2545.649 2873.5348 2141.3812 85373909 pstB Stress Phosphate limitation Erythrobacter litoralis HTCC2594 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter;species:Erythrobacter litoralis; 1424.8847 765.1777 747.3005 1501.687 1304.6625 946.1647 1539.6945 793.6408 1053.6812 1116.8906 980.3239 1120.3949 270284830 type_III_secretion virulence secretion Chlamydia muridarum Nigg superkingdom:Bacteria;phylum:Chlamydiae;class:Chlamydiae;order:Chlamydiales;family:Chlamydiaceae;genus:Chlamydia;species:Chlamydia muridarum; 1626.4363 1756.3064 2406.6774 1077.4884 2492.2689 1972.3754 1401.3751 2194.2504 2187.7634 1833.2184 1858.7595 2030.4376 262219780 pstC Stress Phosphate limitation Grimontia hollisae CIP 101886 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;species:Grimontia hollisae; 2456.8612 906.8622 1921.3785 2135.9783 1225.1083 1162.642 1396.959 1447.9131 1106.1364 1598.3321 2214.4678 1296.6907 198265233 ChrA Metal Resistance Chromium Octadecabacter antarcticus 238 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Octadecabacter;species:Octadecabacter antarcticus; 2971.1525 1588.2913 2024.9529 2986.4577 3822.6595 1579.7828 1514.8768 1792.8546 2166.2245 2024.4252 3210.9122 1413.4295 4154078 MFS_antibiotic Antibiotic resistance transporter Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 2030.2514 1229.7361 2537.4165 1275.7053 977.9518 1895.0215 1495.0409 2823.8542 2060.4522 1814.7937 2195.3494 157316067 pilin virulence pilin Shewanella sediminis HAW-EB3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella sediminis; 1837.6054 1436.4428 1706.9356 1454.3553 2081.8897 1754.9633 1373.2558 1676.2421 1362.5354 1393.0369 2648.0158 2363.1861 90438684 ZntA Metal Resistance Zinc Vibrio angustum S14 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Photobacterium;species:Photobacterium angustum; 607.5732 778.2133 631.8518 485.5822 527.7911 591.0879 515.1626 502.8532 119898829 proO Organic Remediation Aromatics Other aromatics Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 1205.2935 1707.7445 1695.2749 1377.7244 720.2159 1771.7518 1754.6122 886.5411 1757.7662 1749.5593 1121.0841 965.233 116670602 nagG Organic Remediation Aromatics Aromatic carboxylic acid Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 2286.6874 3624.0783 3011.491 2222.7864 3661.2759 2437.6506 3318.9707 1759.0958 2723.7252 2061.857 2989.7418 1783.9282 94312876 fnr Stress Oxygen stress Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 1412.2852 652.2675 643.3453 918.675 1470.4029 947.4256 866.6348 212672447 tutFDG Organic Remediation Aromatics BTEX and related aromatics Desulfovibrio piger ATCC 29098 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio piger; 2624.0664 7018.5612 2586.022 2466.979 6625.6183 2855.963 4110.3561 2378.2838 3040.4656 3200.6729 3912.1184 1692.9926 91685163 fccAB Sulphur sulfide oxidation Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1600.4314 981.4062 1556.7573 1504.1184 1066.6635 1564.1959 1800.1375 1707.6345 1201.9023 1907.4418 1262.9494 830.5805 296811688 cat_fun soil_benifit Arthroderma otae CBS 113480 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma;species:Arthroderma otae; 759.6501 1232.3453 1233.9661 696.6561 10065.069 990.181 1000.158 991.2794 1284.5748 1093.5527 1066.9897 227295588 cda Carbon cycling Carbon degradation Starch Paenibacillus sp. superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 3670.5364 1389.015 2553.1627 3971.5699 1885.9429 2439.9688 2886.001 3113.5699 2359.5037 2917.3801 2483.0629 2851.0141 145903060 sigma_70 Stress Sigma factors Bacillus licheniformis ATCC 14580 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus licheniformis; 903.5906 1237.678 1306.8526 822.509 1802.4262 1062.405 1149.1505 750.1684 1053.7744 885.0696 1003.0032 1060.1785 170694927 mer Metal Resistance Mercury Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 903.6444 936.0681 648.2575 1014.1647 1350.0517 973.2655 794.405 781.2703 1335.0147 692.934 1064.1458 701.5651 145046202 mcrA Carbon cycling Methane Methane production methanogenic archaeon NOBI-1 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanomicrobiales;genus:Methanolinea; 899.1632 899.395 1547.4956 843.9045 1058.2471 825.9596 1390.9141 981.1637 1023.9858 1026.2424 148512080 phdCI Organic Remediation Aromatics Polycyclic aromatics Pseudomonas putida F1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 903.51 694.2017 514.7431 822.8103 1191.9862 837.8542 647.5061 845.0657 872.9819 115251169 CopA Metal Resistance Copper Clostridium difficile 630 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium difficile; 1051.4399 587.3936 549.6816 963.9222 541.4406 566.8915 504.891 697.4934 150416369 primase Bacteria phage REPLICATION Enterobacteria phage phiEcoM-GJ1 superkingdom:Viruses;order:Caudovirales;family:Myoviridae; 5275.6019 6405.4404 10337.7778 6497.2703 6444.0238 4608.7352 4750.7618 9066.1364 6623.958 4812.8068 4730.5165 8955.7434 121594240 CadA Metal Resistance Cadmium Acidovorax sp. JS42 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax; 3738.0941 2423.634 2949.7223 3040.9943 3004.8252 2097.7611 1983.3113 851.6203 1873.382 2281.5285 4712.8099 2679.3233 78066383 mdlD Organic Remediation Aromatics Other aromatics Burkholderia sp. 383 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 4753.5288 2448.3418 3649.5999 3730.1785 4846.19 3416.0162 2870.3901 2158.095 3800.8304 3257.7782 2499.9329 148551013 tftH Organic Remediation Aromatics Chlorinated aromatics Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 1106.5929 2262.8102 1729.9662 1267.2539 2815.9271 1540.5874 1894.4113 2376.6618 1890.8903 2373.4177 827.6715 1291.1291 95112518 iro virulence Iron oxidation Pseudomonas entomophila L48 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas entomophila; 3209.4057 3381.6575 3783.7121 3203.536 6322.6259 3267.6498 4376.408 2599.3683 3986.5689 2650.9598 3357.2461 2629.3328 283797999 obgE Stress Radiation stress Clostridium sp. M62/1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium; 3704.6679 6480.5323 5544.1966 4728.5637 5329.8099 6522.5568 6643.0626 5698.5342 6498.3009 6999.1753 5230.3484 6466.3569 2588989 phdI Organic Remediation Aromatics Polycyclic aromatics Nocardioides sp. superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 461.5095 1897.3665 1346.8943 930.6646 562.3957 1141.2695 1293.532 1592.9828 1393.1312 1721.6767 1184.9918 91684641 rubisco Carbon cycling Carbon fixation Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 4569.8019 4587.1797 5191.8322 4146.3915 5519.9361 4583.2198 6393.7572 3195.2738 5056.1742 3965.1392 5072.3626 4141.745 33391471 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3017.2566 1787.7805 1802.7944 2171.496 1952.6426 1853.114 2054.8225 2400.4588 2262.5962 2441.2762 1818.7826 2141.34 212702525 pstB Stress Phosphate limitation Desulfovibrio piger ATCC 29098 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio piger; 654.2104 544.4165 640.099 625.8721 488.8876 465.0374 938.8247 479.377 479.3087 1181.9384 596.3547 56911348 alkJ Organic Remediation Other Hydrocarbons Bacillus clausii KSM-K16 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus clausii; 621.7273 1194.3342 805.3712 1038.0121 643.4855 1315.3008 1144.3846 798.3736 1216.6033 1354.1442 1134.6216 117578125 ppk Phosphorus Phosphorus utilization Gramella forsetii KT0803 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Gramella;species:Gramella forsetii; 1751.1552 2008.4943 2692.2184 2067.6825 2465.4222 2442.9152 1479.7855 1858.0906 1777.6044 2078.8356 1110.353 2324.5845 178464267 katE Stress Oxygen stress Streptomyces griseus subsp. griseus NBRC 13350 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces griseus; 679.5265 1552.6039 1169.7452 1079.3239 1466.2397 1148.8006 748.4556 1048.1946 1259.3968 758.1925 1347.9536 212541000 amyA_fungi Fungi function carbon degradation Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 1111.1062 657.0189 534.7713 786.3475 544.1756 643.2699 787.7179 935.8297 526.3572 891.842 515.4145 50295905 phenol_oxidase Carbon cycling Carbon degradation Lignin Auricularia polytricha superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Auriculariales;family:Auriculariaceae;genus:Auricularia; 1192.5932 1259.729 1429.4132 1318.7224 1132.1876 2049.0114 1550.4978 1355.8555 1931.3703 1192.5489 2089.7801 1179.7833 73535195 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 449.7965 393.9196 417.3698 900.9366 410.2779 663.243 462.0105 363.2089 389.1283 302880633 superoxide_dismutase_fungi Fungi function virulence Nectria haematococca mpVI 77-13-4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Nectria;species:Nectria haematococca; 1277.9085 2654.3507 1397.3609 1358.2603 4520.8065 2248.0348 2212.7216 3921.2275 1356.9613 1402.0371 1993.97 2089.2807 34104622 endochitinase Carbon cycling Carbon degradation Chitin Chromobacterium violaceum ATCC 12472 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Chromobacterium;species:Chromobacterium violaceum; 1718.246 4698.0654 2342.9072 1529.7259 3612.4551 1839.3392 2829.1316 1618.8738 1792.2122 2073.4757 2913.6318 1661.3258 170696695 MFS_antibiotic Antibiotic resistance transporter Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 34685.0392 27412.5494 33005.6936 31523.6481 34156.1153 35880.8974 27339.3679 30700.7604 39161.3942 29398.9837 36080.1975 31346.887 126708257 katE Stress Oxygen stress Sagittula stellata E-37 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 2468.3995 1755.1596 3117.3239 1522.4936 1516.3268 1933.4442 1991.2659 4836.0684 2159.375 2176.4415 2068.8307 2542.9288 160872880 MATE_antibiotic Antibiotic resistance transporter Rickettsiella grylli superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Legionellales;family:Coxiellaceae;genus:Rickettsiella; 881.2393 1194.7165 1251.4572 800.5107 1951.761 1210.2479 1093.6002 928.083 1248.0438 1132.077 845.7862 1012.953 148273704 iro virulence Iron oxidation Clavibacter michiganensis subsp. michiganensis NCPPB 382 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Clavibacter;species:Clavibacter michiganensis; 4797.2375 5683.1032 4369.1009 4008.5396 3850.2456 3808.9627 3278.5008 7114.8188 4242.5892 4106.473 6757.7846 3672.03 134102853 sod_nickel soil_benifit Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 1336.1912 554.6338 826.468 1796.2523 967.6568 637.5968 1033.3528 1297.0091 819.4211 1214.9767 707.0921 1194.989 71366705 CODH Carbon cycling Carbon fixation Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 2235.8596 1442.9032 1983.244 2429.1876 1450.0063 2401.3517 2372.9148 2284.984 1704.088 2629.71 2023.4482 1813.0408 227349379 srt virulence surface protein Corynebacterium pseudogenitalium ATCC 33035 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium pseudogenitalium; 4105.5548 1419.5716 1756.9514 3573.9308 2181.4652 1165.4986 1989.4995 1741.6596 1674.5928 1542.4775 3948.852 1719.1664 225388459 rubisco Carbon cycling Carbon fixation Clostridium asparagiforme DSM 15981 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium asparagiforme; 5321.4434 4179.934 5554.1016 5272.8543 5281.9088 3528.5813 3807.9879 3823.0346 4353.2122 4166.5476 9642.3707 3489.5291 119819014 catB Organic Remediation Aromatics BTEX and related aromatics Stenotrophomonas maltophilia R551-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 15834.8114 9173.2891 8744.5991 10434.3772 8315.5575 10541.072 15015.0327 7069.3551 8464.1521 19983.7908 7663.4401 8091.9512 9658291 amyA Carbon cycling Carbon degradation Starch Vibrio cholerae O1 biovar eltor str. N16961 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio cholerae; 1539.1398 2543.8091 1609.7828 1578.6534 3861.7351 1338.3933 1795.3774 1935.6426 2401.3467 2379.5704 1552.8302 1399.1341 110680036 dehH Organic Remediation Chlorinated solvents Roseobacter denitrificans OCh 114 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter denitrificans; 1520.5763 1561.8805 1542.6976 1454.4991 1999.5674 1459.4794 1354.1177 1346.1525 1563.4037 1373.7413 2332.917 1597.4154 29160345 exoglucanase Carbon cycling Carbon degradation Cellulose Xylaria hypoxylon superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Xylariales;family:Xylariaceae;genus:Xylaria; 755.5667 1085.6657 1137.7438 819.469 554.5044 505.7912 1965.6249 626.7361 708.0087 1354.7234 1058.462 108798344 benAB Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium sp. MCS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 9729.3487 5768.9243 8565.3563 9667.083 5606.0692 6805.6644 5545.0751 5196.9694 15618.2881 7421.6355 8145.0133 7177.6514 126705681 hrcA Stress Heat shock Rhodobacterales bacterium HTCC2150 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales; 1147.6958 1130.6597 1244.2019 996.6456 2188.0631 1526.0349 967.2499 1226.7801 864.3744 927.0275 2084.4226 1845.1058 109626259 phn Organic Remediation Herbicides related compound Haloquadratum walsbyi DSM 16790 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloquadratum;species:Haloquadratum walsbyi; 1173.5529 1344.5817 1112.1979 1311.2641 1357.9767 1333.5924 1212.1163 979.5019 1092.9964 1022.2661 1975.447 1313.1833 260457718 ureC Nitrogen Ammonification Streptomyces flavogriseus ATCC 33331 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces flavogriseus; 2481.6707 2548.6257 3832.2158 2855.9476 6377.893 2275.7189 4307.2081 2270.7736 2423.4098 2200.6504 2310.0137 2333.8264 146194024 tfdA Organic Remediation Aromatics Chlorinated aromatics Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1978.0132 1596.7441 1208.2603 1854.686 2203.8754 1260.5159 2047.688 1073.4432 1393.4691 1286.2187 1096.9874 1831.8816 219720367 pilin virulence pilin Stenotrophomonas sp. SKA14 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas; 3650.5357 6828.4168 5612.2851 4141.5425 4254.444 6009.9899 6083.5793 5776.3162 7967.325 6848.9642 2223.5491 6215.7553 1150564 ferroxidase_high_affinity Fungi function iron Thanatephorus cucumeris superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Cantharellales;family:Ceratobasidiaceae;genus:Thanatephorus; 1088.6071 910.4237 1592.3354 1673.7691 1001.1962 619.2128 788.7043 1248.5618 873.0004 695.8261 1013.8262 1281.0428 212539808 endoglucanase Carbon cycling Carbon degradation Cellulose Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 463.7662 1215.181 978.6092 749.5697 665.4975 1120.6597 1224.9744 1413.8517 1441.0666 1074.4916 963.6401 90205840 nhh Organic Remediation Aromatics Nitoaromatics Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 880.3125 997.793 864.2727 889.2859 661.4439 519.5154 827.4356 738.9956 729.3388 168703455 sigma_24 Stress Sigma factors Gemmata obscuriglobus UQM 2246 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Gemmata;species:Gemmata obscuriglobus; 999.3898 1128.1366 1384.1736 850.9861 973.2206 1460.4926 2810.3821 1230.3956 1469.4489 882.3275 1337.7642 163669901 sigma_70 Stress Sigma factors Chloroflexus aurantiacus J-10-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aurantiacus; 1068.1363 1416.73 1541.011 796.9494 1754.9409 1393.8162 1269.3266 1984.5827 1598.6001 1246.087 218883826 CopA Metal Resistance Copper Desulfurococcus kamchatkensis 1221n superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Desulfurococcales;family:Desulfurococcaceae;genus:Desulfurococcus;species:Desulfurococcus kamchatkensis; 1300.8105 1581.6569 1554.4019 1398.1475 2226.7027 1520.7105 1094.925 1211.6861 1095.3961 1626.6614 1676.7732 1537.6385 114543658 glnA Stress Nitrogen limitation Roseovarius sp. HTCC2601 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pelagibaca;species:Pelagibaca bermudensis; 4673.4007 2885.5262 5216.0841 5547.0456 5525.6619 3893.017 4108.5132 2704.1308 4195.0383 4512.7643 6751.0577 4200.0525 146402652 sulfite_dehydrogenase Bioleaching Sulphur Acidiphilium cryptum JF-5 1422.4131 1444.7891 1839.8701 1279.9652 2061.1543 1503.4808 1164.0446 1479.832 1237.9208 1378.5094 1853.5702 1414.528 254390239 endochitinase Carbon cycling Carbon degradation Chitin Streptomyces clavuligerus ATCC 27064 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces clavuligerus; 1467.9889 697.2344 841.3128 1675.2758 1124.9261 1082.3866 1281.0524 1935.1827 915.9442 1000.592 815.6593 1365.9567 302200340 sped_bac soil_benifit Thermosediminibacter oceani DSM 16646 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacterales Family III. Incertae Sedis;genus:Thermosediminibacter;species:Thermosediminibacter oceani; 1873.2547 1363.4279 1649.461 1889.8749 693.1405 925.2408 1294.8511 1663.357 1184.5221 1424.3811 884.1534 1162.2236 198260449 sigma_24 Stress Sigma factors Verrucomicrobiae bacterium DG1235 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales; 865.3489 1699.1305 1129.2237 873.8062 1838.108 1167.7271 1095.0626 1625.7006 1268.1848 1316.5914 762.9252 803.8203 219949085 B_lactamase_C Antibiotic resistance Beta-lactamases Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 2329.9932 2314.5195 3036.8187 2322.0866 1741.149 2808.0879 2074.7692 2459.8182 3174.2187 2746.4888 1733.231 2640.2637 196186529 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Brevundimonas sp. BAL3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Brevundimonas; 1781.7674 613.7197 911.6984 1455.4305 1248.694 770.1142 1287.0513 1026.2365 568.6079 767.2132 841.0773 2683.6579 104782428 alkK Organic Remediation Others Pseudomonas entomophila L48 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas entomophila; 1926.4846 922.8796 1316.3032 612.9505 803.2966 647.1688 924.1677 1251.2429 857.9209 750.0839 1239.729 67919998 ChrA Metal Resistance Chromium Crocosphaera watsonii WH 8501 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Crocosphaera;species:Crocosphaera watsonii; 1286.9558 663.645 1418.8502 1135.5385 1566.1145 1146.0256 1113.1856 895.0383 843.0335 1026.1632 2036.0851 1368.3324 46137623 chitin_synthase Fungi function major biomolecule Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 1073.8047 538.6533 1267.3633 1278.8968 653.0221 529.0599 719.2292 567.7751 516.0945 776.9392 1061.2496 148257619 oxyR Stress Oxygen stress Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2455.8806 3064.712 2892.8051 2724.3692 2819.7001 3612.2277 2844.41 2058.2226 3316.2541 3318.6241 2086.753 3433.3892 119959657 gyrB other category gyrB Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 1370.363 667.1365 1052.5279 1531.8216 971.9416 1064.0053 916.0812 870.6482 1133.8609 1098.9126 1573.4914 1229.5121 52627599 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Legionella pneumophila subsp. pneumophila str. Philadelphia 1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Legionellales;family:Legionellaceae;genus:Legionella;species:Legionella pneumophila; 939.522 717.6818 665.1092 782.296 478.8285 193527477 endopolygalacturonase_fungi Fungi function carbon degradation Alternaria macrospora superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Alternaria; 1458.049 2442.5822 2607.2206 1619.7597 1643.3936 2933.7506 2600.0483 2111.6146 3708.2059 2932.6223 953.4884 2941.0159 111021660 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1905.6534 1601.5735 1303.1159 2394.7931 1585.8135 1821.3917 2994.7388 2323.282 1581.6227 1650.3566 2075.2212 3036.4557 193086964 clpC Stress Protein stress Chlorobaculum parvum NCIB 8327 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobaculum;species:Chlorobaculum parvum; 3715.2928 1348.6975 2611.1753 3638.1037 1700.7083 1459.5841 1952.4851 1897.5747 1911.0779 2313.867 3455.771 4341.8116 112821411 czcC Metal Resistance "Cadmium,Cobalt,Zinc" Sphingomonas sp. KA1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 1789.7193 1258.5822 1799.3486 1605.3499 1453.1157 1204.7439 984.4093 1438.5807 1057.8516 1327.0655 1715.5489 1966.3213 162283427 alkB Organic Remediation Other Hydrocarbons Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 1014.031 946.1702 872.3282 751.5064 1446.5816 626.8176 787.3575 808.8216 116094583 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Lactobacillus gasseri ATCC 33323 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus gasseri; 872.6158 827.7946 937.9858 639.6187 1230.6635 726.7859 851.045 759.7368 526.4038 669.719 1676.1485 867.6235 126622481 per_bac soil_benifit Cyanothece sp. CCY0110 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 554.5556 659.0067 856.9573 673.9172 872.9145 727.9375 552.1667 489.0274 539.0413 1029.0698 717.3504 42566464 sigma_70 Stress Sigma factors Deinococcus proteolyticus superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus; 10175.6368 9141.4327 12178.6948 13012.7034 21199.6616 6297.3749 16416.511 7346.894 8997.1492 7160.229 9002.9799 6955.8328 218244507 obgE Stress Radiation stress Thermus aquaticus Y51MC23 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Thermus;species:Thermus aquaticus; 1116.1567 1734.1216 1175.0885 1141.7983 1872.2542 1198.7315 1366.7923 605.2136 1310.6684 1469.2535 1081.2033 1285.6637 229760745 narI Stress Oxygen limitation Streptosporangium roseum DSM 43021 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptosporangiaceae;genus:Streptosporangium;species:Streptosporangium roseum; 1014.695 1795.3878 1630.1526 1062.5718 1184.1936 1954.4129 2099.7055 1608.9846 2970.968 2339.6727 1906.7229 85815566 nirS Nitrogen Denitrification Pseudomonas chloritidismutans superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 2600.6271 695.1701 1641.0572 2148.2513 1153.7446 1171.2119 1257.1484 1562.4437 935.7241 1595.8085 2371.3725 1585.7429 311285733 phzF soil_benifit Pseudomonas fluorescens WH6 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 3323.4996 9984.8369 12982.6411 17265.7301 17386.1217 5298.3248 5513.1076 8581.0456 31787.3146 3416.3864 21868.7797 24736.1344 116198075 arsA_fungi Fungi function metal resistance Arsenic Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 2008.5045 611.5407 1343.6811 1450.9103 987.9687 721.252 877.6215 535.9288 892.6696 1144.8737 1807.1307 1282.8623 111022207 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 7992.9422 5901.5998 7363.0863 9171.1093 6546.2157 8072.3722 6993.329 7937.5099 7067.0952 7254.3845 6897.4156 14317.0719 255064785 hao Nitrogen Nitrification Nitrosomonas sp. AL212 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas; 441.0386 1081.7792 972.0228 419.9655 705.6377 920.7152 606.4274 967.0481 8770.1275 8512.929 67523237 pheA Organic Remediation Aromatics Other aromatics Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 756.7085 737.7302 727.5122 747.1452 1367.4565 938.537 585.8304 996.3874 584.066 583.2572 1231.0687 1217.9495 186909441 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria; 1994.5215 2217.5487 1975.0146 2640.4034 1479.4694 2315.9812 4388.6926 988.8949 1311.6081 15397.92 1850.2548 1864.5234 76795313 atzA Organic Remediation Herbicides related compound Thermoanaerobacter ethanolicus ATCC 33223 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Thermoanaerobacter;species:Thermoanaerobacter pseudethanolicus; 419.0767 655.5025 429.5705 850.2351 628.6373 575.1587 828.95 596.6457 549.2646 156233863 TehB Metal Resistance Tellurium Roseiflexus castenholzii DSM 13941 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus;species:Roseiflexus castenholzii; 1765.6486 1570.2906 2174.3219 726.325 1557.3085 1319.7873 1745.8961 1833.927 1433.426 1866.9128 158338143 atzA Organic Remediation Herbicides related compound Acaryochloris marina MBIC11017 superkingdom:Bacteria;phylum:Cyanobacteria;genus:Acaryochloris;species:Acaryochloris marina; 1828.2297 1603.1281 1800.3373 1733.1889 2421.5877 1875.0997 1418.2592 813.2619 1440.2046 1799.6073 1767.0237 227951638 pstC Stress Phosphate limitation Meiothermus silvanus DSM 9946 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Meiothermus;species:Meiothermus silvanus; 2263.1137 5933.7875 4350.7375 3529.0577 3730.0042 5590.9894 4640.51 3946.4649 4696.059 5457.1109 2562.5363 6191.9984 77458489 katE Stress Oxygen stress Pseudomonas fluorescens Pf0-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 6918.7614 4815.1058 5706.8499 8030.5849 3701.1478 3892.8974 3557.1814 4025.3727 4614.7494 5247.1035 4279.1903 6322.2497 168700059 sigma_38 Stress Sigma factors Gemmata obscuriglobus UQM 2246 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Gemmata;species:Gemmata obscuriglobus; 3273.1285 2454.3691 2396.8487 3316.253 3455.4512 2480.6499 4498.7036 1636.9818 2318.6159 2534.0582 2727.0327 1916.1845 118592435 phn Organic Remediation Herbicides related compound Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 1617.5978 752.7919 692.3121 946.5949 717.6943 1038.789 1570.9624 1475.3172 768.8414 1128.5819 708.3173 614.2205 17544986 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia solanacearum GMI1000 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 1260.9838 867.0948 736.7899 850.4474 810.1223 574.5208 2264.7215 922.2203 976.6288 928.5951 154156896 tfdA Organic Remediation Aromatics Chlorinated aromatics Parvibaculum lavamentivorans DS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Parvibaculum;species:Parvibaculum lavamentivorans; 978.6369 549.1854 978.1266 664.4547 630.9543 819.8269 585.6969 691.2144 1192.4852 995.1421 85699467 sir Sulphur sulfite reductase Nitrobacter sp. Nb-311A superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter; 813.0167 613.1185 519.5776 721.7985 692.3281 387.8618 578.0201 480.1362 284015962 arsM Metal Resistance Arsenic Haloterrigena turkmenica DSM 5511 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloterrigena;species:Haloterrigena turkmenica; 1495.2968 543.7899 2286.2905 1697.0138 13170.1087 807.0862 562.2835 870.3698 617.6383 509.8823 3043.629 3243.1962 66270069 PcF_Oomycetes soil_borne_pathogen oomycete toxin Phytophthora infestans superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 1739.637 1818.2798 2262.9837 1862.1511 1565.0907 1444.5904 1498.6082 2719.6909 1887.4422 2238.8117 1991.7478 2172.1761 214028622 sox Sulphur Sulphur oxidation Ruegeria sp. R11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 13209.5092 5107.9552 10143.443 12444.6671 6519.6913 5946.4855 6200.7362 6571.2885 6284.5662 7807.3359 13547.3057 6968.1919 258554867 sigma_24 Stress Sigma factors Nakamurella multipartita DSM 44233 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nakamurellaceae;genus:Nakamurella;species:Nakamurella multipartita; 4211.0655 11573.7954 6276.5796 7176.01 6124.5746 10226.0627 8097.2466 6975.6438 10329.904 12637.3836 3463.6511 11458.9994 119463317 vanA Carbon cycling Carbon degradation Others Nodularia spumigena CCY9414 superkingdom:Bacteria;phylum:Cyanobacteria;order:Nostocales;family:Nostocaceae;genus:Nodularia;species:Nodularia spumigena; 1090.219 1624.5101 881.0928 1186.2878 1341.0838 1162.2531 1245.5405 719.494 1105.0763 1346.149 883.4087 1381.6528 75825513 endochitinase Carbon cycling Carbon degradation Chitin Vibrio cholerae O395 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio cholerae; 354.9102 554.5669 299.9462 374.5269 755.6376 467.9524 504.923 99083239 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 702.742 788.4507 603.2142 612.0945 818.6917 669.1443 747.282 893.0774 540.5398 620.1139 740.9187 658.1686 29608437 linB Organic Remediation Pesticides related compound Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 2280.7772 2029.6724 2678.5367 1376.5328 1587.425 2255.7672 1953.2307 2543.3376 2448.024 2028.3297 1759.7061 2510.5617 256742382 pstB Stress Phosphate limitation Thiomonas intermedia K12 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Thiomonas;species:Thiomonas intermedia; 1301.2336 2437.8292 1748.8892 1942.5282 2161.2449 2646.1637 1806.4691 1845.8229 2203.274 2746.9969 2336.9212 2558.5082 133740352 CopA Metal Resistance Copper Herminiimonas arsenicoxydans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Herminiimonas; 11679.0332 3165.1488 4798.2047 8597.2926 6496.6934 3184.9565 4625.5528 4461.1265 4711.7967 5354.5136 11701.8558 3339.4737 262069074 chitin_synthase Fungi function major biomolecule Gibberella moniliformis superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella; 610.5248 752.994 445.0766 337.2379 544.8703 114227416 ppx Phosphorus Phosphorus utilization Alkalilimnicola ehrlichei MLHE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Alkalilimnicola;species:Alkalilimnicola ehrlichii; 5192.2545 2056.572 2987.1228 4453.5448 2466.9389 2918.0615 2659.3379 6568.7708 2654.3616 3829.2435 3173.8663 3510.7985 86138907 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Roseobacter sp. MED193 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 546.5467 1299.3711 589.2146 622.0868 1738.8928 563.9867 1336.3045 671.0125 769.2725 565.7258 1183.7883 83317126 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 3657.816 2629.0822 3297.061 3860.1406 3427.903 2940.3763 2448.2054 2550.2855 2601.3706 3362.8433 4644.4123 2915.3089 237799995 type_III_secretion virulence secretion Pseudomonas syringae pv. oryzae str. 1_6 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas coronafaciens; 10779.497 9261.6499 8679.5132 12188.9685 11640.15 10778.7723 12507.8932 14859.8176 8437.0101 9486.0367 13063.521 13064.5899 46136487 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 6496.9873 2838.2768 4033.1079 5607.3558 2838.1477 2691.4887 3179.398 2995.1659 3719.3423 4969.9969 3501.7061 3640.2259 237637151 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 13497.9722 4912.2296 9966.2212 12365.194 7511.0665 7053.8939 7165.9215 14117.9272 7712.0618 8458.552 8829.1619 9556.8083 227873316 nplT Carbon cycling Carbon degradation Starch Oribacterium sinus F0268 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Oribacterium;species:Oribacterium sinus; 2289.3336 1983.3532 2762.415 2481.1012 3450.3511 2379.0818 1973.9115 2241.3602 1704.7403 1930.7126 4710.9845 3291.9873 170767196 nagG Organic Remediation Aromatics Aromatic carboxylic acid Escherichia albertii TW07627 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia;species:Escherichia albertii; 2990.9965 2077.2276 2263.5653 2956.7341 2096.3938 2203.8763 2220.9916 2332.6809 2007.9446 2447.8923 2267.1058 2358.3867 167589862 silC Metal Resistance Silver Burkholderia ubonensis Bu superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ubonensis; 2329.1066 3114.3187 2051.9431 1726.573 2432.0534 1830.8964 2348.8044 2237.9832 2674.7589 1428.7193 1747.4776 1722.7506 152999259 iro virulence Iron oxidation Shewanella baltica OS185 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella baltica; 923.9271 1852.9842 1429.086 1294.1558 1164.6084 1764.9766 1388.6087 1257.5008 2084.5306 2207.5736 1540.742 157083059 SMR_antibiotics Antibiotic resistance transporter Citrobacter koseri ATCC BAA-895 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter;species:Citrobacter koseri; 17588.371 22160.6119 23292.7212 15680.6662 25188.1412 19237.6001 15902.9659 24141.8586 23102.4152 23156.3689 16054.5614 22813.6788 262309733 phoB Stress Phosphate limitation Acinetobacter lwoffii SH145 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter;species:Acinetobacter lwoffii; 5486.5964 3968.9874 2434.1134 4628.8046 4539.8987 3961.5318 3708.4164 2981.3186 4121.8014 3564.018 4345.9547 3340.0642 86740213 TerD Metal Resistance Tellurium Frankia sp. CcI3 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 487.6489 1139.7579 932.8098 694.6837 1197.4303 1268.2631 840.9241 1438.7718 1220.4036 1301.7031 262087133 pstC Stress Phosphate limitation Gordonia bronchialis DSM 43247 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Gordoniaceae;genus:Gordonia;species:Gordonia bronchialis; 956.4199 745.9619 1034.0399 1112.5284 965.4949 1116.2802 668.1597 1065.2235 85059884 proX Stress Osmotic stress Sodalis glossinidius str. 'morsitans' superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Sodalis;species:Sodalis glossinidius; 4239.3002 2607.9423 3956.7901 4077.219 1287.58 1763.3314 2489.372 3854.8961 2240.0555 3409.6754 2372.4536 2236.9035 21646982 sox Sulphur Sulphur oxidation Chlorobium tepidum TLS superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobaculum;species:Chlorobaculum tepidum; 1683.9131 1808.5381 2618.2996 1592.1592 3146.7141 1362.7571 1863.35 1094.7951 1621.928 1278.8935 1799.5149 1549.6955 254474314 glnA Stress Nitrogen limitation Pseudovibrio sp. JE062 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pseudovibrio; 985.7291 739.6937 884.8363 167033048 czcC Metal Resistance "Cadmium,Cobalt,Zinc" Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 3211.3802 3358.619 3360.9911 5222.7156 4136.4588 3614.7852 3126.8758 2506.9401 3469.0532 4272.0268 3426.7493 2781.4048 257455137 pstS Stress Phosphate limitation Enhydrobacter aerosaccus SK60 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Enhydrobacter;species:Enhydrobacter aerosaccus; 443.7116 405.7305 416.2672 9017.9574 476.6057 392.7016 681.3857 2062747 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosospira; 778.1195 1082.2889 1078.7426 1286.8003 1814.712 988.1993 1251.2413 657.0078 1318.5548 1355.9866 1147.0626 1421.5041 62484827 bco Organic Remediation Aromatics Aromatic carboxylic acid uncultured bacterium superkingdom:Bacteria; 3483.008 2219.9825 3406.9432 3270.9298 2074.8652 2527.4631 2531.3998 2547.2654 2771.4019 3330.8339 3714.9481 3263.4309 84369993 coat_Nepovirus soil_borne_pathogen structural Cycas necrotic stunt virus superkingdom:Viruses;order:Picornavirales;family:Secoviridae;genus:Nepovirus; 1698.917 808.4514 783.1865 1531.9449 1115.8066 845.3443 790.5281 1231.9123 710.6783 869.7548 1950.029 939.4162 255259614 pstB Stress Phosphate limitation Sideroxydans lithotrophicus ES-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Gallionellales;family:Gallionellaceae;genus:Sideroxydans;species:Sideroxydans lithotrophicus; 671.2522 390.7769 1221.6948 729.7767 715.002 520.5797 888.8968 724.2713 480.3308 765.1028 1100.4555 150958888 atzA Organic Remediation Herbicides related compound Pseudomonas aeruginosa PA7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 5229.0187 1464.3999 4120.0976 4342.7181 2458.8495 2092.1304 2773.9713 1967.5132 2725.5599 3467.8861 3166.6349 2376.6576 269216321 ppk Phosphorus Phosphorus utilization Slackia exigua ATCC 700122 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Coriobacteriales;family:Coriobacteriaceae;genus:Slackia;species:Slackia exigua; 6540.4139 8138.67 6131.272 10626.3069 3864.7686 8067.5563 10242.9133 3647.1384 8449.9637 6540.3235 5711.0807 10975.4285 163259436 catB Organic Remediation Aromatics BTEX and related aromatics Bordetella petrii superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella; 2080.6853 2004.4613 2143.0547 1839.9337 2854.5192 2055.6521 1619.1316 1586.1519 1792.3461 1824.637 2838.675 1858.8725 19909549 gyrB other category gyrB Mycoplana dimorpha superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Mycoplana; 25830.1331 28953.3283 44749.2652 23608.5974 17742.1438 32927.9728 23039.8907 34542.0754 35854.7504 30420.5017 14740.1994 36534.2816 270506494 sigma_70 Stress Sigma factors Streptosporangium roseum DSM 43021 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptosporangiaceae;genus:Streptosporangium;species:Streptosporangium roseum; 3661.9398 2414.2895 2704.5188 3461.9535 2735.2164 3230.1593 3176.3966 3131.6174 1944.7783 3158.9886 3179.0316 2925.7181 114320264 phoB Stress Phosphate limitation Alkalilimnicola ehrlichii MLHE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Alkalilimnicola;species:Alkalilimnicola ehrlichii; 2598.1287 1773.4834 2103.5582 2567.3408 1887.5166 2286.966 2474.1969 2462.8563 1543.321 1955.6361 1972.7323 1980.4518 27382857 cap virulence capsule Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 1373.4255 925.2959 990.016 764.049 728.348 700.5088 979.5321 956.3233 952.0468 196189100 phn Organic Remediation Herbicides related compound Synechococcus sp. PCC 7335 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 3602.9317 1706.4193 2309.3647 3487.9103 3017.2205 1750.9924 1706.3263 2383.6581 2380.134 1925.5984 3634.3219 1794.7493 280964281 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 3457.9166 2275.0176 2499.8755 3760.7376 2342.1094 2573.0947 2705.15 3283.5139 2838.904 2977.5003 2164.0162 2235.9422 257802726 xylA Carbon cycling Carbon degradation Hemicellulose Enterococcus gallinarum EG2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Enterococcaceae;genus:Enterococcus;species:Enterococcus gallinarum; 1072.5018 807.9182 869.5804 598.4234 857.9824 1107.3702 863.2404 929.1308 1054.4367 1022.0987 258570535 AceB Carbon cycling Carbon degradation Others Uncinocarpus reesii 1704 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Onygenaceae;genus:Uncinocarpus;species:Uncinocarpus reesii; 1319.4949 2460.6766 1584.644 1416.0365 4726.1572 2710.7075 1557.7793 1453.5052 1908.2531 1909.7919 1368.4534 1293.6971 34328778 coat_Nepovirus soil_borne_pathogen structural Tobacco ringspot virus superkingdom:Viruses;order:Picornavirales;family:Secoviridae;genus:Nepovirus; 542.1441 1016.8432 895.7486 807.2636 970.1215 1134.3447 853.3276 810.3932 958.1483 833.4191 1222.54 846.7229 162072858 dsrB Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 1596.6434 1491.4142 1434.0295 1546.7245 1675.7765 1222.4971 1264.0076 1051.0866 1123.5399 1056.1898 2228.3781 1834.2847 142001067 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 503.1633 3893.5399 578.2401 341.9743 453.994 435.3415 121998156 nrfA Nitrogen Dissimilatory N reduction Halorhodospira halophila SL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Halorhodospira;species:Halorhodospira halophila; 1705.9823 2062.6374 2628.2737 2379.2875 742.3417 2660.7834 2806.9826 1116.1955 2414.1955 2472.7656 1276.4752 1015.1089 114737823 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Hyphomonas neptunium ATCC 15444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Hyphomonas;species:Hyphomonas neptunium; 1787.7716 1176.2653 1729.2828 1760.3237 1466.9941 1853.9366 1982.8124 1922.6426 1246.9254 1777.3526 2022.4392 1673.2729 72496158 ahpF Stress Oxygen stress Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Staphylococcaceae;genus:Staphylococcus;species:Staphylococcus saprophyticus; 964.6942 904.3774 911.5676 550.435 1310.8244 847.3634 689.613 942.5718 1199.2114 798.1778 666.8291 88863448 catB Organic Remediation Aromatics BTEX and related aromatics Jannaschia sp. CCS1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Jannaschia; 1942.6326 1120.1216 951.6675 1775.6375 1214.7543 819.4101 1702.6406 1102.3603 655.6604 984.9813 1065.1788 1357.1817 15595679 AceB Carbon cycling Carbon degradation Others Pseudomonas aeruginosa PAO1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 845.7377 772.9761 777.3536 1012.3704 834.03 1005.9599 1581.5035 603.3496 1034.8915 852.9827 1015.0635 598.3047 160945305 Al Metal Resistance Aluminum Faecalibacterium prausnitzii M21/2 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Faecalibacterium;species:Faecalibacterium prausnitzii; 593.3752 560.596 877.0525 613.9277 636.1503 441.2637 817.6652 187724817 ChrA Metal Resistance Chromium Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 2577.6981 2122.1706 2891.3803 1735.5175 1774.3471 2395.6982 2005.1678 3351.3462 2204.8757 2175.5817 2303.1186 3345.6945 84388670 katE Stress Oxygen stress Oceanicola batsensis HTCC2597 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola batsensis; 2512.0814 2261.6761 2917.1006 2230.4228 4898.3667 3172.3483 2831.4257 2124.2877 2184.5328 2358.9683 2303.3589 2539.3584 229823905 amyA Carbon cycling Carbon degradation Starch Catonella morbi ATCC 51271 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Catonella;species:Catonella morbi; 2874.1624 3195.2977 2574.0124 2121.4864 24684.1095 3047.8522 1689.8513 2847.6148 2336.8349 2425.8553 4008.0726 3324.684 91776906 Mex Antibiotic resistance transporter Methylobacillus flagellatus KT superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Methylophilales;family:Methylophilaceae;genus:Methylobacillus;species:Methylobacillus flagellatus; 719.7294 1056.3961 708.1456 1015.3975 1070.4175 1013.2137 801.8492 1048.0363 1598.6068 988.1415 648.5922 1022.2635 196221892 linB Organic Remediation Pesticides related compound Chthoniobacter flavus Ellin428 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Spartobacteria;genus:Chthoniobacter;species:Chthoniobacter flavus; 19534.4406 17129.3073 22272.1656 15848.0295 18144.6168 14250.1043 16063.1018 27770.5258 17203.6909 18772.5939 23092.819 20891.9008 55978109 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1640.3924 2564.3628 2459.165 1372.3687 1245.2813 2576.071 2377.6979 2639.5303 2718.9083 2833.6094 827.3832 2897.1548 13183346 cat_fun soil_benifit Lentinus sajor-caju superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Lentinaceae;genus:Lentinus; 653.4678 410.3113 665.2542 622.4703 650.9874 511.2581 812.6204 586.3376 610.0231 736.7268 149204236 pstB Stress Phosphate limitation Roseovarius sp. TM1035 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 1587.7782 1703.6223 2068.4018 1382.1693 1986.4759 1761.2674 1428.6474 2260.0012 1571.6804 1660.853 2298.6378 846.9014 62953148 AceA Carbon cycling Carbon degradation Others Gibberella fujikuroi superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella; 17831.3878 429.3912 569.15 923.3638 513.9542 630.1858 577.4222 607.6447 730.7563 489.3643 91717038 CopA Metal Resistance Copper Shewanella denitrificans OS217 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella denitrificans; 1569.3625 868.5598 1092.3365 598.8903 1287.8772 2283.6526 556.6027 78093578 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1665.887 1833.0038 1707.2046 1798.0261 3733.2937 1799.8322 2502.6775 1692.8915 1829.5645 1612.2008 2699.7408 1823.8412 218143823 gyrB other category gyrB Desulfovibrio salexigens DSM 2638 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio salexigens; 2503.6459 697.0942 1675.5739 2021.0287 1340.5908 816.5984 1603.9163 1670.1838 1182.0409 1339.9963 1551.5329 1449.1061 116669176 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 641.9869 2682.8431 1744.9564 1220.2166 1344.0604 2080.1504 2277.5169 904.2739 1952.5365 2690.9245 2517.9497 188579415 fnr Stress Oxygen stress Methylobacterium populi BJ001 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 12607.0707 12082.4399 10850.6436 14465.4447 5503.9153 13486.4886 9103.8738 9030.5862 9609.9764 10072.1933 8736.1627 9968.4354 187923580 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 1455.2954 2351.5366 1406.0264 2234.3403 3808.1175 2397.9865 1341.9019 1156.4906 2821.0579 1780.1442 1849.2458 1801.8901 259030496 fnr Stress Oxygen stress Mesorhizobium opportunistum WSM2075 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium opportunistum; 1801.4188 1261.4748 1841.824 1024.9146 600.3155 1069.9887 2365.9132 623.6258 917.536 961.3926 1027.0835 27356185 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 2373.675 2237.3124 3522.4666 3833.2386 2017.699 3152.4864 5792.5108 1442.4904 2867.6187 2353.8764 2030.9439 1932.2238 120323396 alkB Organic Remediation Other Hydrocarbons Marinobacter aquaeolei VT8 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter hydrocarbonoclasticus; 489.9862 837.0892 558.2749 7769070 arsenic_resistance_gene Bioleaching Metal Resistance Acidithiobacillus ferrooxidans superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus; 689.1748 631.7789 723.4731 652.4686 23491841 gyrB other category gyrB Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 821.3178 1625.3257 981.0954 1182.069 2154.2583 1435.5494 1161.1426 1696.0507 1370.2644 1342.2631 1165.5296 1697.5655 229589851 iro virulence Iron oxidation Pseudomonas fluorescens SBW25 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 2332.0752 2617.6649 2443.9131 2302.4581 1380.5551 2634.2061 2155.3819 2467.6738 3105.9326 3084.754 2010.2347 3001.4382 56380307 ureC Nitrogen Ammonification Geobacillus kaustophilus HTA426 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus;species:Geobacillus kaustophilus; 1347.7295 2484.7983 1420.9148 1556.2854 1298.6144 2168.1682 2363.0963 1181.3649 1812.2017 1511.8368 1809.2448 1272.3021 134097188 alkK Organic Remediation Others Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 5537.0482 7380.1567 6817.3322 6846.516 6016.183 9257.4636 7624.3635 7018.8682 9363.9625 8821.4393 5224.126 8938.9899 114738064 narH Stress Oxygen limitation Hyphomonas neptunium ATCC 15444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Hyphomonas;species:Hyphomonas neptunium; 1430.862 1740.4377 1759.6921 1071.4067 1482.3608 1449.5485 1528.6143 1824.6102 1775.0242 1785.761 2206.5637 2477.1784 194561935 xylG Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia dolosa AUO158 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia dolosa; 5641.5111 4228.4003 4452.1504 7085.0037 3091.1816 3766.7261 4183.8114 2911.0654 3904.2459 4576.1152 2864.2452 2883.9717 227949507 obgE Stress Radiation stress Meiothermus ruber DSM 1279 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Meiothermus;species:Meiothermus ruber; 3051.9926 3194.8304 2764.6541 2729.903 3943.6403 2915.1002 2970.4907 2896.3951 3471.814 2501.776 4176.9416 2618.0723 118169434 glnA Stress Nitrogen limitation Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 3176.3488 3200.8917 3085.904 2953.3918 4343.3263 3380.7492 2815.6656 3018.0672 3260.7237 3839.6618 3408.4426 2933.2983 116195332 ara_fungi Carbon cycling Carbon degradation Hemicellulose Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 2229.5867 1124.8108 1894.4659 2478.9644 1573.1106 1976.638 2152.9044 2509.9904 1586.0376 1510.1953 1828.8009 2199.7574 262086218 amyA Carbon cycling Carbon degradation Starch Gordonia bronchialis DSM 43247 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Gordoniaceae;genus:Gordonia;species:Gordonia bronchialis; 2083.9135 3638.8469 2977.231 2458.1853 2159.6901 3061.4848 3153.1197 2240.1498 3280.853 3778.0788 1525.274 2938.7775 118619280 akbF Organic Remediation Aromatics BTEX and related aromatics Mycobacterium ulcerans Agy99 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium ulcerans; 1565.2119 1995.4587 2453.5673 1143.2091 969.6096 2373.0245 1844.2635 2587.603 2551.8975 2254.7295 2354.0816 261284238 sigma_70 Stress Sigma factors Geobacillus sp. Y412MC10 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 476.2717 496.8503 583.2504 595.3507 519.9736 481.4525 255020517 glnA Stress Nitrogen limitation Acidithiobacillus caldus ATCC 51756 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus;species:Acidithiobacillus caldus; 1114.33 2735.0621 1377.2964 1385.4499 2584.6587 1640.2112 3997.1564 1775.2126 2254.5934 1574.0004 2478.6904 1337.0638 90107528 fnr Stress Oxygen stress Rhodopseudomonas palustris BisB18 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1723.5115 933.2775 1201.325 1465.6489 1228.54 1133.6866 1187.5585 888.381 990.8119 1366.7623 1188.6173 1348.8462 77868224 phn Organic Remediation Herbicides related compound Marinobacter aquaeolei VT8 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter hydrocarbonoclasticus; 1064.2006 498.1447 864.7214 831.5082 753.9465 1046.4747 531.3291 613.666 696.5966 687.0019 62149224 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 2176.7739 2412.1885 2444.6998 1818.3225 2040.1882 2031.5693 1770.4549 2498.2116 1925.7067 1863.839 3251.6676 2454.5376 194348064 iro virulence Iron oxidation Stenotrophomonas maltophilia R551-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 2764.2459 2444.175 4514.8447 1826.6334 3252.7927 1944.2726 2263.2709 4605.7241 2474.4321 3475.4681 2267.6343 3976.0367 163867064 sigma_70 Stress Sigma factors Burkholderia andropogonis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1271.8908 602.5954 997.336 1027.9855 470.7008 724.586 645.817 810.6284 807.9839 116700355 ahpF Stress Oxygen stress Syntrophobacter fumaroxidans MPOB superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Syntrophobacterales;family:Syntrophobacteraceae;genus:Syntrophobacter;species:Syntrophobacter fumaroxidans; 1991.5799 5178.498 3387.9619 3408.3551 3111.7907 5757.6175 3232.6657 3608.2715 4428.9722 4223.0731 1850.375 3848.3534 256361491 endochitinase Carbon cycling Carbon degradation Chitin Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 1834.919 2105.4779 1591.8992 2215.2185 2800.2855 1945.499 1377.8955 2393.4746 1690.3189 1840.0522 2876.8021 2748.8454 86558194 sigma_70 Stress Sigma factors Synechococcus sp. JA-2-3B'a(2-13) superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 2319.4756 2028.6403 1469.2368 1630.252 2061.5367 1825.7888 2128.8112 1409.9178 1643.6591 1635.6783 1667.788 1575.0043 99030609 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 2891.9064 1623.5417 2190.9696 2791.9802 2349.2192 2094.2991 2820.7125 1834.112 1811.2698 1611.3298 1992.5285 2461.4685 170101416 phenol_oxidase Carbon cycling Carbon degradation Lignin Laccaria bicolor S238N-H82 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Tricholomataceae;genus:Laccaria;species:Laccaria bicolor; 476.8359 471.2718 691.8961 370.7595 732.9425 567.9699 83770743 tfdA Organic Remediation Aromatics Chlorinated aromatics Aspergillus oryzae superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus; 587.1794 457.8284 430.9663 1107.654 388.6513 438.6559 903.8018 479.1673 590.1915 683.1157 110820674 vanA Carbon cycling Carbon degradation Others Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 3053.4433 1156.5525 1608.4015 2639.6363 1806.5025 1461.8874 1434.3634 1533.5387 1565.4889 1488.9679 3616.1593 1375.5556 46123737 groEL Stress Heat shock Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 5515.6236 3688.2689 4225.0291 7091.7154 5498.4739 5161.1457 7535.1252 3729.4232 4291.5497 4705.7428 4688.3053 5061.5789 217980160 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Thauera sp. MZ1T superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Thauera; 4494.2721 1823.243 1790.3632 4127.4478 2844.1389 2606.7015 3012.5635 1518.6141 2391.2704 2863.904 2782.7938 2474.0611 214037762 tfdA Organic Remediation Aromatics Chlorinated aromatics marine gamma proteobacterium HTCC2148 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 1995.7036 20625.788 10277.5989 26527.4759 34516.8394 23635.7508 6715.7724 15128.1619 19570.3761 4289.0444 14112.4124 25025.2552 83573738 CopA Metal Resistance Copper Moorella thermoacetica ATCC 39073 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Moorella;species:Moorella thermoacetica; 4739.6936 2425.9022 3491.2794 4326.5413 3107.43 3259.8127 2921.9831 3677.8348 2839.8942 3078.8805 4716.0777 3201.1615 14276799 dsrA Sulphur sulfite reductase Desulfotomaculum geothermicum superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfotomaculum; 1037.4838 470.9139 656.1379 1421.4606 432.0092 602.3131 575.3677 487.8109 668.7252 720.0653 701.6269 154252063 linB Organic Remediation Pesticides related compound Parvibaculum lavamentivorans DS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Parvibaculum;species:Parvibaculum lavamentivorans; 582.6024 816.8488 776.8551 829.0869 1139.9456 742.5003 811.9891 688.9588 626.1772 473.2975 110286692 sigma_32 Stress Sigma factors Chelativorans sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 2953.3323 1682.6162 1585.7199 2904.4095 1360.1192 1225.0695 1359.7037 1551.5862 1361.9237 1710.5102 3814.4343 1593.8038 238786211 CysJ Sulphur sulfite reductase Yersinia bercovieri ATCC 43970 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia bercovieri; 542.7888 829.4351 576.1181 570.8289 293006 nasA Nitrogen Assimilatory N reduction Klebsiella oxytoca superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella; 996.1257 1633.7612 1237.0776 818.3437 1375.3816 860.4801 986.8296 1848.7824 1044.2922 1056.871 1753.1714 1016.647 169851160 phenol_oxidase Carbon cycling Carbon degradation Lignin Coprinopsis cinerea okayama7#130 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis;species:Coprinopsis cinerea; 1504.8337 1669.9459 845.7037 1225.6339 1829.8606 1171.2369 1895.7266 1137.963 1516.7614 1270.6005 1091.4618 817.1846 115386584 pheA Organic Remediation Aromatics Other aromatics Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 899.3326 935.2144 1432.5174 952.5396 1171.0357 878.1584 884.7827 1755.41 1035.1478 973.7144 1029.9106 1340.3047 225679404 Tet Antibiotic resistance other Paracoccidioides brasiliensis Pb03 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Paracoccidioides;species:Paracoccidioides brasiliensis; 486.8161 1244.7183 787.1677 635.5652 1230.5497 787.972 733.0393 1044.0298 946.6741 900.0047 731.9095 1108.2692 99081901 oxyR Stress Oxygen stress Ruegeria sp. TM1040 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 3774.986 2990.4229 2562.5843 4149.5282 1559.3839 3553.5392 3990.9358 3582.8526 2993.4505 4288.2628 2661.3495 2155.0587 170739921 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 8516.3989 4051.8522 7126.4707 8019.6269 5021.5847 4605.5795 4792.1541 4255.8864 5038.4445 6586.4521 6018.6917 5764.0297 116700254 CopA Metal Resistance Copper Syntrophobacter fumaroxidans MPOB superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Syntrophobacterales;family:Syntrophobacteraceae;genus:Syntrophobacter;species:Syntrophobacter fumaroxidans; 2079.6689 1428.262 1673.0877 2137.3755 933.0367 1421.311 1191.9402 1259.4496 1654.6382 1118.0743 953.4095 187928897 CadA Metal Resistance Cadmium Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 4863.7945 4579.8209 4674.4083 5306.8594 4193.7734 5314.4925 4064.5153 4738.853 5277.7195 4924.8174 3464.7683 5557.8934 111222038 alkK Organic Remediation Others Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 10434.2687 2660.7984 3915.0618 1245.3242 982.7675 2599.4776 2347.1986 3321.7392 3553.7294 2977.3551 765.9764 3056.8483 302891959 per_fun soil_benifit Nectria haematococca mpVI 77-13-4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Nectria;species:Nectria haematococca; 688.9963 776.1363 615.313 1101.3769 902.0378 723.316 791.6522 550.6718 754.8394 828.6176 775.5382 525.8236 254502915 B_lactamase_A Antibiotic resistance Beta-lactamases Labrenzia alexandrii DFL-11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia alexandrii; 1090.5414 1058.8044 1148.8665 2459.1029 1782.9358 1256.1786 1421.0236 1513.1914 4146.7651 1210.4096 932.8272 1046.968 115364090 ppx Phosphorus Phosphorus utilization Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 3419.1241 2478.9494 3195.052 2256.7494 3305.0452 2465.23 2168.4121 3758.2435 2863.693 2634.0315 3560.9027 2787.3509 147919764 bco Organic Remediation Aromatics Aromatic carboxylic acid uncultured methanogenic archaeon RC-I superkingdom:Archaea;phylum:Euryarchaeota; 977.9653 587.3299 1029.9991 975.3164 696.8049 653.5859 731.6347 761.362 219856949 akbF Organic Remediation Aromatics BTEX and related aromatics Pseudomonas resinovorans superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1045.5969 946.6317 1575.0916 1151.1537 1088.5238 1510.3308 1287.5445 1167.8202 1225.6312 1300.2326 872.8619 4437.2914 242797093 scytalone_dehydratase_Fungi soil_borne_pathogen fungi virulence Talaromyces stipitatus ATCC 10500 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus; 2007.6046 1825.3965 2128.6679 2057.5052 1860.3096 1737.5019 1412.4324 2095.2254 1433.3317 1415.0907 3604.6515 2304.4941 120555046 pimF Organic Remediation Aromatics Aromatic carboxylic acid Marinobacter aquaeolei VT8 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter hydrocarbonoclasticus; 1922.2826 629.2146 1195.0585 1795.4579 1703.9124 1191.5226 1054.3089 1622.1057 898.7038 1284.5884 2077.888 1395.5087 148239579 pstB Stress Phosphate limitation Synechococcus sp. WH 7803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 846.181 837.3898 495.2066 777.0689 548.793 724.1542 499.5879 631.2171 967.663 474.5334 32487229 mdlB Organic Remediation Aromatics Aromatic carboxylic acid Nonomuraea sp. ATCC 39727 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptosporangiaceae;genus:Nonomuraea; 3478.5419 5605.5405 4102.4394 5561.1677 2706.0045 5752.6996 5058.6876 3712.5885 6294.4318 6340.9633 2600.7715 5579.0294 10174630 alkJ Organic Remediation Other Hydrocarbons Bacillus halodurans C-125 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus halodurans; 659.9288 457.4971 719.69 711.8595 655.4317 864.1482 453.2718 773.5111 219997419 ArsC Metal Resistance Arsenic Thioalkalivibrio sp. HL-EbGR7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Thioalkalivibrio;species:Thioalkalivibrio sulfidophilus; 1364.6408 1781.371 2223.2909 1559.1482 1935.7875 1854.3853 1382.7015 2316.2131 1678.8214 2168.3235 987.9877 2282.1378 209899248 dmsA Organic Remediation Others Enterobacter cancerogenus ATCC 35316 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter;species:Enterobacter cancerogenus; 674.547 1832.6088 1426.9197 1031.6839 1181.9374 1416.9438 1286.5237 1401.469 1407.3546 1989.2583 1620.4309 12698672 necrosis_Oomycetes soil_borne_pathogen oomycete virulence Phytophthora sojae superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 5627.6277 5850.3174 3393.3342 5641.9335 8113.8329 3878.8759 6885.1694 4552.5258 4632.2811 4678.5581 5281.4002 4385.6727 91796194 sigma_70 Stress Sigma factors Chromohalobacter salexigens DSM 3043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Halomonadaceae;genus:Chromohalobacter;species:Chromohalobacter salexigens; 2149.2213 2877.1925 2403.6241 2461.9566 1311.8671 3781.473 5366.2428 1918.0793 2482.4932 2059.9866 1776.163 1757.7543 262308250 phoB Stress Phosphate limitation Acinetobacter lwoffii SH145 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter;species:Acinetobacter lwoffii; 1972.0224 1641.3431 2074.1158 1763.3098 2216.4076 2018.4109 1509.6196 1835.2498 1877.4474 1835.6526 2774.8177 2025.7686 87281195 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1054.7846 544.1581 1005.2019 820.1667 810.2926 922.444 946.9017 1645.8906 1387.7378 913.8287 1011.0273 1052.7905 218677860 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Rhizobium etli CIAT 894 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 1517.1511 1742.5189 2688.9325 3873.0573 1684.9718 3150.9309 3274.3371 9435.5346 2370.6634 2646.6942 2165.738 5635.646 212527162 ABC_antibiotic_transporter Antibiotic resistance transporter Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 1994.8036 696.7519 998.9935 1416.6528 1047.2393 1394.8256 1355.6664 1016.4163 1284.7782 1527.1958 1453.9399 182636182 ArsC Metal Resistance Arsenic Beijerinckia indica subsp. indica ATCC 9039 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Beijerinckia;species:Beijerinckia indica; 7102.2063 6189.7854 6590.4435 9842.7674 4629.3688 6269.7806 4907.881 4142.1668 6598.6798 8227.7415 8376.0098 5223.6343 123440743 SMR_antibiotics Antibiotic resistance transporter Yersinia enterocolitica subsp. enterocolitica 8081 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia enterocolitica; 1223.4271 1747.221 1155.5111 1804.7996 1142.5206 1829.9916 1123.0385 928.2767 1371.4992 1335.2729 1513.1176 1511.0252 170774621 pilin virulence pilin Leptothrix cholodnii SP-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Leptothrix;species:Leptothrix cholodnii; 2708.5422 1269.6682 1795.8882 2030.6718 724.7649 1073.6072 1278.4372 1240.4943 1407.5992 1939.4671 1471.6271 1947.5629 83318864 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 679.9026 1070.2854 1151.2219 545.462 837.746 582.1585 715.0884 1883.5822 676.3489 662.5836 1741.063 997.6277 260865924 ctsR Stress Protein stress Ammonifex degensii KC4 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Ammonifex;species:Ammonifex degensii; 941.5503 916.2025 1561.3808 24315.6819 1017.6341 1001.0842 663.025 1930.2683 1220.8318 1287.8601 1223.2089 156054490 pnbA Organic Remediation Aromatics Nitoaromatics Sclerotinia sclerotiorum 1980 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Sclerotinia;species:Sclerotinia sclerotiorum; 469.9316 357.1494 1215.9831 417.3336 454.3851 966.6779 146397305 Arylest Organic Remediation Aromatics Other aromatics Geobacter uraniumreducens Rf4 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter uraniireducens; 1953.2978 2360.4819 1883.9975 1734.6546 3369.7162 2011.6656 4427.1408 1531.3478 2337.4639 1964.5916 2051.7252 1184.6348 121720168 ahpC Stress Oxygen stress Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 3379.5257 2609.9557 1011.9918 3201.8786 2051.9337 980.0407 2779.7867 1533.2724 1320.2904 1782.478 1873.1983 2183.3336 111223775 pimF Organic Remediation Aromatics Aromatic carboxylic acid Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 2124.4118 2450.6865 3084.5228 2356.2619 2609.5146 2714.1624 2598.7751 4037.247 2904.6972 3262.9371 2553.0466 2926.8029 254284060 pilin virulence pilin gamma proteobacterium NOR51-B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 2281.2205 958.17 726.7271 1775.4047 1513.1605 932.8237 897.0406 907.3484 927.8086 958.8128 149675743 dehH109 Organic Remediation Chlorinated solvents Methylobacterium sp. CPA1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 652.0709 1545.7357 905.1848 560.8717 1740.656 883.1389 1477.9962 459.9165 1021.1574 804.7772 1044.8781 642.6007 301098452 necrosis_Oomycetes soil_borne_pathogen oomycete virulence Phytophthora infestans T30-4 superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora;species:Phytophthora infestans; 4030.6026 3414.6098 2113.038 2050.1633 2274.3101 2114.2956 1685.2403 1863.719 2445.3564 1805.7042 3772.5114 1429.2216 56314403 fnr Stress Oxygen stress Aromatoleum aromaticum EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 5330.4863 3566.6157 5445.5898 5723.1546 1709.3728 3720.4663 2423.2921 3756.7668 3545.7498 3156.867 3177.9986 2664.8034 189419921 ppx Phosphorus Phosphorus utilization Geobacter lovleyi SZ superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter lovleyi; 702.8584 1230.2427 803.2775 932.9247 1569.2618 1242.6581 807.2402 1031.9134 1803.2903 1171.7514 788.9509 159039501 xylA Carbon cycling Carbon degradation Hemicellulose Salinispora arenicola CNS-205 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora arenicola; 5222.2891 3003.2291 3886.5354 3782.5715 4708.8661 3579.9072 3008.5604 2721.2583 3561.6701 3390.2346 5351.024 4479.7118 6580765 gyrB other category gyrB Zymomonas mobilis superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Zymomonas; 954.0478 701.4777 699.1457 376.6266 1140.3572 428.8385 396.2745 981.6686 649.4573 611.4636 706.5843 163746343 obgE Stress Radiation stress Oceanibulbus indolifex HEL-45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 1100.0917 543.5974 815.8832 674.3428 591.0815 528.6486 815.2694 735.3709 633.9235 664.6047 586.3987 255524908 ABC_antibiotic_transporter Antibiotic resistance transporter Clostridium carboxidivorans P7 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium carboxidivorans; 448.8697 648.9263 505.0277 722.4531 555.3379 427.1524 575.0497 408.8371 1007.3756 526.4141 82795272 type_III_secretion virulence secretion Pseudomonas syringae pv. tagetis superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 7; 5177.1394 8410.8975 9432.253 5571.7475 5954.0896 8228.1042 7844.8246 9590.5889 9701.8949 9493.9366 3467.8674 11002.7419 256760448 narH Stress Oxygen limitation Thiomonas intermedia K12 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Thiomonas;species:Thiomonas intermedia; 2718.0657 976.9462 3346.3789 2663.7303 1860.3096 1104.7761 1843.667 1188.5185 1393.1312 1543.1587 1994.3627 118592525 phzF soil_benifit Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 837.7992 1820.3887 1003.588 828.3852 1844.6111 928.5611 994.572 1323.2149 1069.4423 1449.9635 31429.8001 843.4958 147851197 fnr Stress Oxygen stress Synechococcus sp. RCC307 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 3042.8855 1825.9827 2308.2597 1228.0379 887.0598 2598.8495 2089.5773 2758.1159 2421.942 2178.1165 951.9989 2475.1872 229473037 dsrB Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 1591.5123 1957.5368 2649.6322 1734.9011 1622.5381 2123.8826 2025.3554 2328.3173 2381.6017 2222.6818 1284.9559 2412.3891 302309126 superoxide_dismutase_fungi Fungi function virulence Ashbya gossypii ATCC 10895 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Eremothecium;species:Eremothecium gossypii; 714.9919 1534.7643 1405.8374 780.3331 30484.9589 1637.9977 1667.2893 1432.9038 1807.3441 1753.1549 1544.0515 120561778 silC Metal Resistance Silver Desulfovibrio vulgaris subsp. vulgaris DP4 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 4857.2665 3965.343 4205.0955 6007.6385 4761.4599 5820.4189 3391.0466 4200.8967 4765.4517 5031.1555 6528.9022 7202.7404 255534424 groEL Stress Heat shock Flavobacteriaceae bacterium 3519-10 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae; 2342.1628 1044.7621 1361.0703 1945.9663 1494.8835 1278.1045 1308.0992 1688.4008 1203.4283 1430.3217 1823.6596 1704.4728 151208 endoglucanase Carbon cycling Carbon degradation Cellulose Ralstonia solanacearum superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 4667.0786 7718.5607 7092.0703 3864.3457 9741.2388 5744.2316 4426.0626 6114.437 5421.5897 5802.3887 4147.2952 4515.4022 84664430 bclA Organic Remediation Aromatics Aromatic carboxylic acid Rhodobacterales bacterium HTCC2654 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Maritimibacter;species:Maritimibacter alkaliphilus; 618.1042 1126.5566 1218.1472 894.2566 1000.7584 725.6492 2094.1938 1428.0016 976.1343 1230.3752 1023.424 1322.2878 194684001 type_III_secretion virulence secretion Proteus mirabilis HI4320 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Proteus;species:Proteus mirabilis; 1346.2789 17391.7623 1299.2048 1196.1638 1887.9716 1304.5921 1129.1407 879.5812 1069.3413 1184.604 1900.202 1487.2957 113866392 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 1235.8251 1864.2995 1797.0513 1563.4766 1200.442 2350.7246 1898.1965 1888.1576 2396.8968 2009.0788 2161.1421 226089071 sigma_24 Stress Sigma factors Gemmatimonas aurantiaca T-27 superkingdom:Bacteria;phylum:Gemmatimonadetes;class:Gemmatimonadetes;order:Gemmatimonadales;family:Gemmatimonadaceae;genus:Gemmatimonas;species:Gemmatimonas aurantiaca; 7303.8385 4207.3114 6298.5924 6375.376 3937.4216 3706.542 4165.1149 5139.8615 4561.0012 5244.055 4538.3437 4904.6593 221729505 hrcA Stress Heat shock Diaphorobacter sp. TPSY superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax ebreus; 3087.2255 13457.9049 4631.8003 2785.9944 5697.1129 3543.5335 2886.8269 7069.7425 3599.0554 3218.5951 5805.3773 4300.0103 118591384 bclA Organic Remediation Aromatics Aromatic carboxylic acid Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 1520.0525 7400.1469 1961.3039 1884.0809 2397.2247 2543.9898 3646.718 1707.2108 2337.2892 2198.8414 2583.702 1721.858 116665933 nifH Nitrogen Nitrogen fixation Methanosaeta thermophila PT superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanosarcinales;family:Methanosaetaceae;genus:Methanosaeta;species:Methanosaeta thermophila; 1187.7912 765.1012 1086.8702 1108.7694 826.7969 845.7423 834.7861 1067.5796 1006.1933 220911354 sped_bac soil_benifit Arthrobacter chlorophenolicus A6 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter chlorophenolicus; 1893.4972 1073.3819 1449.2668 1715.2041 992.6248 1498.7098 2041.1155 1927.2907 1200.9121 1912.8463 1062.513 116619921 sigma_24 Stress Sigma factors Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 1377.2269 12677.7849 14816.9135 9872.5459 19839.0685 20654.14 9013.9816 11361.8691 11998.1598 15759.9361 15100.7846 20614.9604 50951895 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Leifsonia xyli subsp. xyli str. CTCB07 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Leifsonia;species:Leifsonia xyli; 1571.3236 749.1858 1094.169 1579.1739 816.2544 595.1213 708.0878 726.649 1186.1003 1272.8926 71554239 vdh Carbon cycling Carbon degradation Others Pseudomonas syringae pv. phaseolicola 1448A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas savastanoi; 11504.4 3590.8776 7589.9168 10906.6542 5692.2972 5466.6429 8218.0052 9330.3001 5398.0239 8453.7951 5057.3712 5488.9845 108463273 alkK Organic Remediation Others Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 756.6144 714.6917 742.3024 682.1 1358.4141 598.8584 543.3816 90337528 sox Sulphur Sulphur oxidation Aurantimonas sp. SI85-9A1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Aurantimonas;species:Aurantimonas manganoxydans; 2725.4266 1855.9532 1580.3112 2395.2314 2074.3818 1860.1584 1386.1426 1346.5035 2008.1485 1623.0434 3106.5734 1523.9611 219543998 ChrA Metal Resistance Chromium Chloroflexus aggregans DSM 9485 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aggregans; 585.4232 1075.1531 628.571 459.3321 1141.5536 783.0664 686.0687 1042.3715 475.6028 681.3433 170076992 sigma_70 Stress Sigma factors Synechococcus sp. PCC 7002 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 863.8714 1119.8922 791.9076 570.2545 737.7711 898.2896 492.8757 616.3253 614.097 656.4644 1664.7128 501.6822 225643846 sigma_38 Stress Sigma factors Sulfurihydrogenibium azorense Az-Fu1 superkingdom:Bacteria;phylum:Aquificae;class:Aquificae;order:Aquificales;family:Hydrogenothermaceae;genus:Sulfurihydrogenibium;species:Sulfurihydrogenibium azorense; 2708.0989 2311.8053 2669.4786 3113.9131 1218.9524 2321.1841 1850.368 2203.9438 2360.0961 2118.2971 2042.1925 60476014 rubisco Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 1138.4544 825.9087 1159.7566 1185.4386 766.8535 950.1491 710.8393 944.2685 672.3335 118419953 gyrB other category gyrB Alcanivorax balearicum superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax; 1579.6113 2135.9453 1672.099 875.9156 1731.2352 2426.4693 1707.816 2157.3481 1910.3004 891.0004 2080.1212 90903257 aoxB Metal Resistance Arsenic uncultured bacterium superkingdom:Bacteria; 538.5308 906.3525 1159.2477 781.3342 1037.6673 930.0405 1244.7429 1370.1013 924.9617 1033.8673 158524034 dsrA Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 681.3398 544.9609 545.1743 490.5495 1030.9437 639.6655 708.5618 678.7992 1064.4099 729.426 525.8528 78169475 rubisco Carbon cycling Carbon fixation Synechococcus sp. CC9902 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 689.7485 645.4359 797.4326 450.5657 615.2119 823.0806 477.683 445.885 451.0351 947.1475 261212165 oxyR Stress Oxygen stress Vibrio sp. RC341 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 2904.9223 1300.9894 2374.0217 2538.0692 1828.8747 1939.4716 1890.0412 1799.3364 1813.0405 1874.8022 2903.5655 1849.0195 83852779 pstA Stress Phosphate limitation Oceanicaulis alexandrii HTCC2633 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Oceanicaulis; 2509.2875 1939.9776 3426.7387 2536.1652 2932.7178 2742.9084 2335.6825 3460.1637 2343.9174 2658.3073 3415.7701 3262.394 149917733 glnA Stress Nitrogen limitation Plesiocystis pacifica SIR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Nannocystaceae;genus:Plesiocystis;species:Plesiocystis pacifica; 7172.2154 4549.105 7941.845 3126.2683 3072.7151 6011.306 4358.6177 9445.3391 5383.0783 5781.3176 2572.6506 6489.6607 189193483 cutinase_fungi Fungi function carbon degradation Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 20012.9543 11634.5009 15905.9355 12977.8432 6656.5034 11000.3946 13644.0881 11807.851 9631.9347 21510.3003 10518.8843 9544.6002 150954317 ABC_antibiotic_transporter Antibiotic resistance transporter Klebsiella pneumoniae subsp. pneumoniae MGH 78578 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella pneumoniae; 2028.3038 2239.5423 1927.9067 1986.9904 2579.6913 1890.9384 1714.8105 2053.5625 2495.9128 2305.9835 2232.3992 158519558 ara Carbon cycling Carbon degradation Hemicellulose Bacillus subtilis superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 566.8161 1158.1326 1399.3528 536.0381 1226.7753 1902.8885 1149.552 1249.8719 948.0828 1660.6392 157407646 vanA Carbon cycling Carbon degradation Others Methylobacterium populi BJ001 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 1758.9593 1310.1385 1841.1254 1072.7305 599.8774 756.9891 1012.4498 774.8639 1003.0375 1069.7674 1034.8011 163758372 oxyR Stress Oxygen stress Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 684.9531 126717171 Catechol Organic Remediation Aromatics Other aromatics Roseobacter sp. CCS2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 1119.7633 1110.7431 771.6977 1349.4733 1413.0991 1684.093 2062.7713 733.4705 850.7801 1138.1068 781.7845 1134.0173 13898399 dsrA Sulphur sulfite reductase uncultured bacterium BMNP superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria; 1361.9678 973.6738 2262.4894 988.6873 789.6264 874.4787 2629.7016 1118.2396 1356.478 1729.5344 108764769 cat_bac soil_benifit Rubrobacter xylanophilus DSM 9941 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Rubrobacterales;family:Rubrobacteraceae;genus:Rubrobacter;species:Rubrobacter xylanophilus; 2005.3614 2938.9175 3078.2805 1781.2261 1840.8572 2968.4193 2344.893 2662.3832 2843.1792 2999.5428 2353.8826 3080.0834 2624008 xylanase_fungi Fungi function carbon degradation Cryptococcus adeliensis superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Tremellomycetes;order:Filobasidiales;genus:Cryptococcus; 2144.3319 1929.2443 2060.5324 1532.0253 921.2176 1416.8178 1114.0651 1130.8554 1581.4484 1503.2915 1230.6519 166200720 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1772.9961 1170.4674 1392.2284 1726.6552 1808.114 1265.9301 1011.5938 1042.9041 1196.5438 1386.203 1627.4266 1604.3503 315049075 dmaW_ergot Fungi function toxin Arthroderma gypseum CBS 118893 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma;species:Arthroderma gypseum; 1645.1072 1313.2137 1844.2029 1683.9463 1133.7613 1540.7968 972.6638 1643.3366 916.282 1277.6987 2350.1348 1493.6538 28852189 trzN Organic Remediation Herbicides related compound Pseudomonas syringae pv. tomato str. DC3000 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 2125.5401 928.8431 1393.9005 1726.1758 938.5729 989.2089 1429.5804 904.4433 996.3976 1227.4887 1739.3573 1341.8152 220924353 sigma_24 Stress Sigma factors Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 3402.7233 2722.4214 3174.3405 3628.262 2973.5851 3640.7194 2902.2142 4045.5626 2663.1856 2899.4356 4713.6992 3903.166 229349623 amyA Carbon cycling Carbon degradation Starch Vibrio cholerae TMA 21 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio cholerae; 1681.1729 1198.6539 1939.044 2033.0962 1351.495 1193.5689 1873.7172 1304.18 1496.0697 1593.5037 1461.2317 118592556 bphA Organic Remediation Aromatics Polycyclic aromatics Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 1980.5564 1371.6851 1849.6019 1931.4332 2189.798 1686.8898 1966.3717 1861.1408 1479.9236 1872.234 1705.899 1497.9109 167731833 iro virulence Iron oxidation Xanthomonas campestris pv. campestris superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas campestris; 3290.6039 1602.6567 2857.5033 3506.5664 2804.5514 2497.3561 2613.0211 1379.6329 2667.4899 3171.5397 3578.753 2470.4632 71736719 Arylest Organic Remediation Aromatics Other aromatics Pseudomonas syringae pv. phaseolicola 1448A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas savastanoi; 597.5929 1675.7862 1018.9708 1037.2588 1490.0299 1597.3315 1598.3303 818.4546 1762.985 1151.7018 2061.0607 307732581 cat_bac soil_benifit Methylobacter tundripaludum SV96 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae;genus:Methylobacter;species:Methylobacter tundripaludum; 1482.2943 1242.2972 1383.7083 1513.8094 1250.097 1315.0466 1039.5697 1444.7255 1261.1837 1206.2669 1948.3473 2443.5616 148868418 oxyR Stress Oxygen stress Vibrio harveyi HY01 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio harveyi; 1930.2748 2243.3516 3085.7877 2626.1854 2523.6279 4180.9405 1606.0827 1559.8655 1984.903 2336.6237 2248.2945 2030.1905 197714537 katE Stress Oxygen stress Streptomyces sviceus ATCC 29083 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces sviceus; 2931.7466 2023.0973 3889.734 2262.8311 2214.379 2240.3323 2397.1858 5248.7878 3156.454 2434.0329 3530.7038 1878.3793 218750926 CODH Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 4379.1573 2483.4603 3733.4055 4824.5559 3413.1525 2864.5479 2730.1665 2441.928 3334.4964 3733.7816 4697.0983 3664.0927 78224098 cytochrome Energy process Energy process Geobacter metallireducens GS-15 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter metallireducens; 916.2707 853.8404 868.4144 774.4991 1248.9973 976.8849 915.6568 844.1324 680.3678 716.9642 995.8974 227487525 xylA Carbon cycling Carbon degradation Hemicellulose Corynebacterium glucuronolyticum ATCC 51867 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium glucuronolyticum; 1504.0278 1729.4069 1948.829 2355.7962 775.7104 2225.4807 3297.5987 11672.8642 1696.1084 1428.1889 1397.8475 3745.3333 70730249 amyA Carbon cycling Carbon degradation Starch Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 8451.3681 679.5222 995.1842 1151.6742 665.4452 878.0689 1006.5187 923.1899 934.7993 1041.2965 153887635 ureC Nitrogen Ammonification Ralstonia pickettii 12D superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 21870.0187 28301.3622 14140.5803 19501.1114 21673.3529 14334.5251 9293.6143 10856.1123 13943.404 11233.0909 33216.9933 16982.1912 119410920 phytase Phosphorus Phosphorus utilization Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 1690.9852 2250.3098 1866.1939 2573.1211 2746.0613 3123.7105 1906.4895 3611.1118 1680.6104 2426.2741 4521.4424 2110.3805 91696778 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 854.6702 2063.0707 669.0802 780.5672 1578.1159 801.008 1491.1869 786.9472 1133.1736 756.739 1411.5416 829.2965 18161111 CopA Metal Resistance Copper Pyrobaculum aerophilum str. IM2 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Thermoproteales;family:Thermoproteaceae;genus:Pyrobaculum;species:Pyrobaculum aerophilum; 1173.7141 845.7616 1335.6553 1223.7643 556.9164 575.4581 655.3056 1069.0736 684.5963 889.5305 948.5874 919.8751 159045149 sigma_32 Stress Sigma factors Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 7643.7697 3367.2839 5438.0875 6587.2904 4283.452 4399.2575 3588.4148 6381.2151 5517.5886 4951.7286 5715.8135 5370.5293 153813412 glnA Stress Nitrogen limitation Ruminococcus obeum ATCC 29174 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Ruminococcus;species:Ruminococcus obeum; 371.4723 527.5083 426.8186 411.7069 156057169 ATP_sulphurylase Fungi function Sulfur Sclerotinia sclerotiorum 1980 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Sclerotinia;species:Sclerotinia sclerotiorum; 742.9135 1907.4968 1280.2599 1105.445 1460.6805 1690.928 1539.1669 835.3522 1628.696 1719.7784 734.7924 1779.836 108463107 glnA Stress Nitrogen limitation Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 1222.0032 2322.9848 1822.7281 1580.3793 894.6436 1293.6591 1264.8105 3606.8069 1479.2518 1901.3449 2410.5566 1716.983 17740053 gyrB other category gyrB Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 2843.4964 2556.9042 3390.957 3770.7368 2259.1235 3230.5283 4317.1643 3308.715 2779.8323 2818.49 2537.9591 3707.3496 89951176 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Saccharophagus degradans 2-40 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Saccharophagus;species:Saccharophagus degradans; 706.4851 708.8938 948.5262 617.2759 614.2307 433.6743 569.4932 726.3329 675.865 110816912 nhh Organic Remediation Aromatics Nitoaromatics Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 7889.7016 3016.9529 3683.7095 6044.0466 5110.3153 2689.2901 3540.1711 2849.3215 3423.669 3385.031 5277.7009 2980.6749 270278858 obgE Stress Radiation stress Streptococcus sp. M143 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus; 469.0585 566.3301 706.6029 498.4446 507.764 684.4449 430.6005 513.5744 110632414 nagG Organic Remediation Aromatics Aromatic carboxylic acid Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 4983.5435 3972.1093 5524.1467 4391.5635 5500.0096 4505.0134 4058.1207 6143.6567 3960.5801 4033.5449 7264.1992 5785.3423 226305479 CysJ Sulphur sulfite reductase Rhodococcus erythropolis PR4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus erythropolis; 2644.1477 3788.2343 3218.635 3560.3292 4322.1959 3751.4408 4583.5603 2492.0397 3998.5324 2752.8369 3431.302 3006.32 86372241 contractile_tail_sheath_protein Bacteria phage STRUCTURAL Stenotrophomonas phage SMB14 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 922.9466 1298.3517 1407.524 959.9362 809.3447 782.5728 822.6906 1662.3282 1142.3646 1020.044 1097.8523 1321.8484 256359843 narH Stress Oxygen limitation Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 1341.7522 2106.5483 1613.0541 1761.4743 951.5601 2466.5461 1973.0283 1627.0442 1932.9779 2068.462 826.8307 1771.1571 46108780 chitin_synthase Fungi function major biomolecule Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 2657.4054 2027.6336 2361.6777 2313.3065 1339.4343 1904.8029 1486.1515 2777.8491 1686.335 1778.0114 2520.3251 2236.7249 338973674 fccAB Sulphur sulfide oxidation Bradyrhizobiaceae bacterium SG-6C superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae; 1055.4562 632.7316 508.2585 946.3072 672.9865 853.8844 933.9403 934.7524 782.0397 782.8686 929.0314 871.0154 256685140 ara Carbon cycling Carbon degradation Hemicellulose Jonesia denitrificans DSM 20603 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Jonesiaceae;genus:Jonesia;species:Jonesia denitrificans; 9995.3754 11052.1789 10045.098 9734.5022 18171.5583 8704.4848 8978.4124 9372.193 11544.1658 9778.9735 9730.7572 10788.0232 167646405 CopA Metal Resistance Copper Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 4412.9865 3064.1577 4007.5621 3877.3652 4613.7366 3656.6853 2604.4414 3221.6127 3252.9596 2780.9708 5303.5873 3924.6709 148750870 single_strand_annealing_protein Bacteria phage REPLICATION Lactobacillus phage LL-H superkingdom:Viruses;order:Caudovirales;family:Siphoviridae; 1868.1908 621.6853 1298.9089 1390.5303 617.6797 817.334 1091.4786 883.4903 868.5041 1948.0348 946.4335 117561083 pimF Organic Remediation Aromatics Aromatic carboxylic acid Aeromonas hydrophila subsp. hydrophila ATCC 7966 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas;species:Aeromonas hydrophila; 3136.9518 3665.7273 6144.1104 2735.3957 3924.567 3776.1486 3190.18 5775.0937 4517.2711 4095.9542 3146.19 4723.4747 223585860 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 6256.0656 7955.2155 6208.0696 7049.5134 8113.2214 25901.4986 4591.8189 4707.8358 13824.084 3775.9238 11219.8742 6683.9323 259032994 xylA Carbon cycling Carbon degradation Hemicellulose Mesorhizobium opportunistum WSM2075 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium opportunistum; 3330.753 3057.1556 3666.6838 3068.9031 2828.137 3672.2921 2588.016 4403.7643 3113.7257 2806.2181 3431.8185 3383.4722 257373006 sid_arc soil_benifit Halomicrobium mukohataei DSM 12286 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halomicrobium;species:Halomicrobium mukohataei; 6693.3272 1878.2909 3511.9837 5210.4015 3369.3939 2540.9237 2698.7266 2692.2807 3242.8542 3734.5186 7024.746 3311.8992 222879992 nrfA Nitrogen Dissimilatory N reduction Campylobacter rectus RM3267 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Campylobacteraceae;genus:Campylobacter;species:Campylobacter rectus; 440.9043 471.2718 368.23 44149.0217 395.0471 446.8998 403.5554 675.7551 62289349 CopA Metal Resistance Copper Brucella abortus bv. 1 str. 9-941 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Brucella;species:Brucella abortus; 781.397 810.6814 758.5686 1335.4676 760.6469 576.4936 493.0097 512.3357 795.6207 167652543 clpC Stress Protein stress Anaerostipes caccae DSM 14662 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Anaerostipes;species:Anaerostipes caccae; 596.1522 890.6409 640.7427 564.5837 519.0093 1187.8568 569.7997 960.8858 589.9012 883.5287 649.3066 114797686 pcc Carbon cycling Carbon fixation Hyphomonas neptunium ATCC 15444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Hyphomonas;species:Hyphomonas neptunium; 1420.8281 1514.9242 1421.0748 1158.9887 1055.7617 910.9875 1117.7966 2516.3088 1177.4512 1359.2472 2415.3375 1082.9055 299767096 per_fun soil_benifit uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 5249.5567 3661.1782 4222.6737 4198.0722 3715.6329 3426.2911 2099.1205 2495.2877 3674.9598 2715.8145 5836.9456 2599.2589 119718977 atzA Organic Remediation Herbicides related compound Thermofilum pendens Hrk 5 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Thermoproteales;family:Thermofilaceae;genus:Thermofilum;species:Thermofilum pendens; 1416.6372 2244.9961 1606.6568 1170.9466 2875.5548 2136.4359 1473.7981 2915.3746 2129.9265 2167.1845 1103.4259 2610.643 119371714 narG Nitrogen Denitrification Thauera aromatica superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Thauera; 3295.9365 3284.8778 1740.6236 2100.1593 3407.7617 2707.0133 2071.7755 2231.2532 2472.0557 2200.963 1958.9662 1874.905 262014334 protease_serine_fungi Fungi function carbon degradation Dactylellina parvicollis superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Orbiliomycetes;order:Orbiliales;family:Orbiliaceae;genus:Dactylellina; 694.9468 1025.1981 848.8904 667.0306 1923.1901 390.8128 850.85 383.7238 190894358 alkK Organic Remediation Others Rhizobium etli CIAT 652 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 982.6531 1291.4452 1576.3129 873.7103 1286.4235 1007.7098 1205.7044 2558.6616 1144.3682 1255.4216 1438.5322 270505625 sigma_24 Stress Sigma factors Streptosporangium roseum DSM 43021 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptosporangiaceae;genus:Streptosporangium;species:Streptosporangium roseum; 2649.0774 3652.5643 4010.2664 3664.718 3503.6843 2907.1434 3638.4939 5167.4713 3705.6548 4033.0201 4390.1119 4759.2475 182415090 linB Organic Remediation Pesticides related compound Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 5433.1628 5850.5659 6391.0199 4868.7167 5176.1618 4729.0735 6859.2726 7336.8595 7022.8991 6337.9763 4295.3829 5751.6981 158522906 silC Metal Resistance Silver Candidatus Desulfococcus oleovorans Hxd3 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfococcus;species:Desulfococcus oleovorans; 2013.0178 2591.6446 3179.0294 2511.4549 3128.1148 2376.2999 2773.0766 4148.9089 2645.2172 3549.1332 3050.476 3322.0336 119897081 pimF Organic Remediation Aromatics Aromatic carboxylic acid Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 4077.441 2709.1437 3150.9392 3226.9177 3438.3307 2777.2032 2261.5389 2348.8099 2692.9662 2260.3351 4283.0342 2820.4459 49473894 pstA Stress Phosphate limitation Bartonella quintana str. Toulouse superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bartonellaceae;genus:Bartonella;species:Bartonella quintana; 931.2074 1370.2834 666.5504 1366.8349 1085.6769 1796.7309 1167.2755 887.9169 1169.7526 1038.9919 657.997 253701113 pstC Stress Phosphate limitation Geobacter sp. M21 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 1840.9098 3080.7676 2708.3572 2695.9742 2477.4804 3469.9934 2480.8726 2629.3385 2940.6225 3517.119 2951.6628 3787.1345 189202886 ATP_sulphurylase Fungi function Sulfur Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 2228.3375 2974.724 1822.6408 2197.9322 4900.4332 2174.734 4186.1743 1133.8435 2658.8115 1938.5515 2068.3742 1519.1136 218674830 ara Carbon cycling Carbon degradation Hemicellulose Rhizobium etli GR56 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 995.3198 576.7232 640.2908 736.1229 499.8391 593.5384 545.237 500.3568 575.5188 688.334 218989010 phenol_oxidase Carbon cycling Carbon degradation Lignin Boletus edulis superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Boletales;family:Boletaceae;genus:Boletus; 2763.7086 2718.0762 1800.3082 1421.31 1752.373 1944.9755 1453.0255 2102.9237 1617.6062 1291.0314 2329.7619 1243.4092 47573016 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Rubrivivax gelatinosus PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 3034.7589 3385.9645 3217.8063 3798.2278 3805.103 3976.3834 2471.077 3268.2262 3053.6638 3750.5201 3780.5837 4016.1627 209901764 amoA Nitrogen Nitrification Archaea superkingdom:Archaea;phylum:Crenarchaeota; 2994.9053 5070.3902 3695.3266 4402.6174 4337.2782 4439.5647 3036.7313 2838.5608 3324.8627 3980.4149 5524.0732 4402.0554 209544809 pstA Stress Phosphate limitation Gluconacetobacter diazotrophicus PAl 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter;species:Gluconacetobacter diazotrophicus; 2334.6004 4198.7229 4171.8291 2625.0759 2498.8668 3241.5361 4043.6338 4164.5597 3922.4648 4379.716 2839.9964 3885.4719 266628875 pstB Stress Phosphate limitation Caulobacter segnis ATCC 21756 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter;species:Caulobacter segnis; 838.4171 314.538 341.9553 708.0935 403.4579 860.5079 602.7565 507.6839 412.2541 494.9688 62003549 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2902.4576 2701.0012 2635.2309 2745.3059 3583.6366 2838.0304 2413.3989 2669.8636 2490.3679 2760.017 4329.0534 3200.5435 254463841 sigma_24 Stress Sigma factors Rhodobacterales bacterium Y4I superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales; 10350.1492 3556.0904 5262.0143 8058.5826 4640.024 2634.6997 3818.4961 2994.3186 3252.5345 3606.7037 9757.2083 2945.1493 148511729 CadA Metal Resistance Cadmium Pseudomonas putida F1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 812.3585 1986.7555 1085.4599 783.1685 1949.2109 975.4042 1346.8227 735.1167 1102.502 855.0932 1421.4397 950.8553 148844004 ahpC Stress Oxygen stress Planctomyces maris DSM 8797 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Planctomyces;species:Planctomyces maris; 1058.465 3307.6488 1428.9697 1247.8582 2703.1368 2087.1051 2172.1055 844.733 1987.9026 2079.5056 874.039 1930.0679 119820741 gyrB other category gyrB Stenotrophomonas maltophilia R551-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 714.6251 389.9359 548.1476 407.84 548.4031 429.1836 691.5176 146192148 nagG Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 6246.7033 7009.4885 7060.9267 5533.9507 4882.4406 7641.9751 7000.6355 6133.7191 7632.8491 8725.7205 4318.927 6944.0367 87283736 sigma_70 Stress Sigma factors Synechococcus sp. WH 5701 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 3451.7509 3372.8906 3141.5103 3318.7272 2625.3743 3449.65 3506.2479 3098.9953 3670.6098 3479.2862 3181.2536 2933.5111 88178809 endoglucanase Carbon cycling Carbon degradation Cellulose Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 3777.9948 6197.7368 7634.4512 2519.2351 4281.8974 4609.3784 5229.8732 11000.4476 5346.9899 5448.9706 2821.5936 7972.6445 227369374 katE Stress Oxygen stress Chryseobacterium gleum ATCC 35910 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Chryseobacterium;species:Chryseobacterium gleum; 1437.0678 1052.2573 1544.0643 1299.0596 1518.6209 1202.746 922.0481 943.8601 1195.0527 1084.8987 2571.8578 1346.1409 145241710 nahB Organic Remediation Aromatics Polycyclic aromatics Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 601.458 829.6168 2397.1299 617.919 1730.7503 576.7234 610.5656 673.8394 653.4401 94470993 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 724.4886 1299.6193 614.0047 126236466 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium sp. JLS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 1226.1807 1202.8335 862.206 1529.0958 702.6202 1522.939 2563.9515 1277.9812 1164.451 1053.6773 889.2706 1599.2556 39983462 MFS_antibiotic Antibiotic resistance transporter Geobacter sulfurreducens PCA superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter sulfurreducens; 18784.329 32840.878 25215.1465 24777.0555 28918.0696 33845.1671 26271.0079 28749.6566 33720.2925 34220.1505 17034.0445 34116.2897 226939578 AceB Carbon cycling Carbon degradation Others Laribacter hongkongensis HLHK9 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Laribacter;species:Laribacter hongkongensis; 2617.1219 692.9911 1263.3214 1932.4742 1028.3463 861.7215 1102.9197 1593.2007 1176.3911 1112.7255 2829.6178 1082.2876 146342512 MFS_antibiotic Antibiotic resistance transporter Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 8779.148 4673.5743 6633.8438 8365.01 4902.443 5765.6191 5209.1236 4638.1273 6230.7365 7658.5318 7284.1396 6301.8297 283811623 sigma_24 Stress Sigma factors Kribbella flavida DSM 17836 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Kribbella;species:Kribbella flavida; 5181.5221 2044.4156 2442.052 3551.1244 2741.5868 2176.5736 1970.8719 2732.3943 2368.6365 2508.4871 4536.2776 2923.2462 112462479 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 1131.577 2535.0422 1928.9826 854.8762 3060.543 1104.9107 1341.6381 2087.0026 1655.2673 2546.7322 1094.633 1987.1532 115253557 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1504.5469 1638.1956 3043.5069 1003.6024 1205.3125 1491.4859 1650.9672 3201.6406 1939.0121 1764.6899 12726.0876 2110.1264 259169017 ahpF Stress Oxygen stress Lactobacillus antri DSM 16041 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus antri; 3859.0184 2573.7541 3627.7325 3898.6032 3692.5971 2957.1572 1944.0602 2565.8032 3094.2487 3286.5094 5648.857 3468.1458 270327272 iro virulence Iron oxidation Acidovorax avenae subsp. avenae ATCC 19860 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax avenae; 8802.9098 3980.2646 6763.0126 7499.6414 6608.4978 5136.767 4947.5909 6711.0929 5616.756 6541.1052 8549.0831 5547.0174 254514049 ppx Phosphorus Phosphorus utilization gamma proteobacterium NOR5-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 696.196 364.4507 580.597 451.1083 750.5888 527.7653 487.9842 739.7605 218751012 CODH Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 2197.1612 3114.4079 2340.421 2098.7622 2954.3696 2653.6044 2501.5305 3325.2252 2705.3956 2873.898 2362.6035 2548.9161 210150998 nplT Carbon cycling Carbon degradation Starch Clostridium nexile DSM 1787 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium nexile; 4186.6791 4622.4639 4430.6829 4702.0521 4888.5266 3968.9202 3262.5457 3780.8482 3553.3741 4033.8074 5904.3466 4796.0228 20278799 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 1120.6969 1648.5299 1124.0949 1566.8736 1135.9017 2016.4366 1289.0701 1151.0316 1430.1865 1658.8654 1477.3623 150258763 pstB Stress Phosphate limitation Victivallis vadensis ATCC BAA-548 superkingdom:Bacteria;phylum:Lentisphaerae;family:Victivallaceae;genus:Victivallis;species:Victivallis vadensis; 953.5319 1036.5686 1294.2178 578.1306 828.2852 1216.8436 944.8944 1267.2568 1587.9364 1466.8025 1098.3132 149357989 linB Organic Remediation Pesticides related compound Marinobacter algicola DG893 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter algicola; 33773.2347 1800.0261 1769.7753 1905.312 2709.3556 2570.8064 1755.9542 1570.9893 2251.1919 2472.4306 2109.7686 2227.4419 84665810 pcc Carbon cycling Carbon fixation Rhodobacterales bacterium HTCC2654 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Maritimibacter;species:Maritimibacter alkaliphilus; 2781.2915 1232.5237 2119.4644 3100.695 2090.8197 2381.9085 2097.1705 3488.8629 1824.2351 2051.3996 2291.6108 2598.2839 67900802 per_fun soil_benifit Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 2132.4578 1166.033 909.9392 1735.6682 1868.8604 1781.8323 2435.4161 1336.1422 1480.4983 1385.2874 1823.3233 1359.3652 112462885 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 2107.5006 860.1097 1432.3283 1772.131 1055.7617 546.5476 1173.2208 8440.1461 472.2115 1038.7478 739.8165 89214401 nagK Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas alcaligenes superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 7147.8627 3195.1575 2874.0201 4074.0274 3762.5388 1702.1602 2419.8854 1987.6668 2367.8443 2277.8552 6185.7828 1900.406 88177857 endochitinase Carbon cycling Carbon degradation Chitin Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 759.4933 2156.9833 2229.2666 1213.5733 3918.9739 1743.0058 1752.8228 2512.5202 2429.5371 2186.7705 1247.3094 2848.6933 209537148 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Rhizobium leguminosarum bv. trifolii WSM2304 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 3125.306 3980.4557 3961.2247 3855.7437 2494.2217 4143.0862 3646.6377 3287.6536 4210.9973 4690.3555 4058.9568 3871.1491 145218055 CadA Metal Resistance Cadmium Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 809.5511 1055.9246 958.4138 677.9042 610.8183 1186.4973 1144.3731 765.0142 1136.8896 1096.8468 1106.484 2828018 bphA Organic Remediation Aromatics Polycyclic aromatics Ralstonia sp. U2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 860.6744 1253.74 802.8439 850.5433 1434.213 899.2618 797.6396 1188.9422 1098.5762 860.1628 1196.9252 118467529 acc soil_benifit Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 2877.7497 5079.5202 3049.9552 3811.8579 3391.9652 4275.0455 5376.1327 1974.9755 4251.5414 3931.0313 5718.7686 2803.7267 118434552 mhpA Organic Remediation Aromatics Aromatic carboxylic acid Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 3677.8839 7135.6908 4752.2599 4874.8532 4869.2827 4480.8141 9187.8473 2950.3317 5971.5127 4701.4214 5040.6261 3014.3878 10639270 ahpF Stress Oxygen stress Thermoplasma acidophilum superkingdom:Archaea;phylum:Euryarchaeota;class:Thermoplasmata;order:Thermoplasmatales;family:Thermoplasmataceae;genus:Thermoplasma; 942.4771 818.174 917.2685 1289.2863 835.4732 689.5557 508.2584 669.0567 793.6107 71383844 nasA Nitrogen Assimilatory N reduction uncultured bacterium superkingdom:Bacteria; 958.5556 785.0306 963.2877 939.0841 822.2369 563.2585 671.7709 525.8728 624.9159 39934082 proO Organic Remediation Aromatics Other aromatics Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1089.2921 2712.2784 2121.0347 1933.0084 1706.2824 3423.6738 2222.4598 2075.0354 2672.0097 2911.3167 1778.4213 2982.6936 211582832 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 395.485 432.1295 404.3777 650.3678 404.9834 437.6351 544.9465 487.8342 256.8506 683.2356 428.0771 218760950 proV Stress Osmotic stress Desulfatibacillum alkenivorans AK-01 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfatibacillum;species:Desulfatibacillum alkenivorans; 1124.8206 1062.0155 1096.4953 884.504 950.8586 1246.4869 1028.9024 1070.8892 919.4039 985.5173 1684.9896 1310.0523 147849120 CopA Metal Resistance Copper Synechococcus sp. WH 7803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 1941.0476 1325.6208 1653.1104 2249.476 1154.8632 1457.2061 1419.3145 1402.2921 1886.0443 1905.6551 2340.4528 1850.1181 27314546 merB Metal Resistance Mercury Staphylococcus epidermidis ATCC 12228 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Staphylococcaceae;genus:Staphylococcus;species:Staphylococcus epidermidis; 3824.484 3248.6125 3588.9121 4116.2158 2585.3033 4155.7093 4853.1795 6619.282 3613.8612 4088.897 3559.9657 3966.5477 257470531 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Fusobacteria;class:Fusobacteria;order:Fusobacteriales;family:Fusobacteriaceae;genus:Fusobacterium;species:Fusobacterium ulcerans; 1394.1247 9383.76 1458.4267 1687.7405 2015.8916 1132.7444 1038.8815 1769.0394 1238.678 1115.6288 2651.6435 1033.8124 56551811 CopA Metal Resistance Copper Zymomonas mobilis subsp. mobilis ZM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Zymomonas;species:Zymomonas mobilis; 608.4696 1321.5177 876.8909 669.9048 621.9286 911.5963 1540.9384 955.8418 1233.1892 1044.9631 118027455 mhpA Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 5770.9313 6243.7501 3844.3708 6531.9798 3754.955 6496.9367 4809.7188 3179.2114 4897.6206 5732.6207 2547.9293 4239.0661 133910667 pimF Organic Remediation Aromatics Aromatic carboxylic acid Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 2535.1849 4562.816 3897.3673 2457.0209 5768.0595 2601.2125 3356.9227 3173.1229 3895.0315 3790.9315 4070.4645 2679.9777 229785523 ara Carbon cycling Carbon degradation Hemicellulose Bifidobacterium angulatum DSM 20098 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium angulatum; 1833.6698 853.6493 2420.9843 1945.4595 1074.1146 1224.8452 1204.8327 1771.7024 1410.593 1209.1925 1365.7507 1774.961 241463896 pstB Stress Phosphate limitation Allochromatium vinosum DSM 180 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Chromatiaceae;genus:Allochromatium;species:Allochromatium vinosum; 1915.6471 1278.7791 1848.5211 2562.4097 1054.8896 1604.7798 1489.2141 949.0113 1936.8803 1822.6102 2427.3498 1661.1747 755163 clpC Stress Protein stress superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus;species:Synechococcus elongatus; 2469.6487 3361.9958 2219.8305 2554.2186 2476.8169 1765.3355 2563.0682 1612.3254 2144.2896 1468.7454 2524.5534 2029.0644 54027542 TerZ Metal Resistance Tellurium Nocardia farcinica IFM 10152 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Nocardia;species:Nocardia farcinica; 9840.998 17743.4985 22849.0923 11619.9734 13628.1426 12539.98 14050.8855 21505.8547 16280.9379 17593.16 14693.7478 22375.5985 227113544 grpE Stress Heat shock Pectobacterium carotovorum subsp. brasiliensis PBR1692 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium carotovorum; 3611.9716 1420.7694 2268.1888 2848.4003 1299.9795 2118.1843 1597.4127 1594.169 1953.2238 2892.2333 2452.3354 1990.6412 156938015 glnA Stress Nitrogen limitation Ignicoccus hospitalis KIN4/I superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Desulfurococcales;family:Desulfurococcaceae;genus:Ignicoccus;species:Ignicoccus hospitalis; 2892.0139 2230.1511 3189.8177 2927.1611 2830.4501 2735.9986 2437.2972 2692.7528 2347.3073 2456.4849 21441.2519 2904.8174 114538805 Catechol Organic Remediation Aromatics Other aromatics Fulvimarina pelagi HTCC2506 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Fulvimarina;species:Fulvimarina pelagi; 2292.3827 1472.9247 1499.5298 1784.2807 1950.1589 1297.9366 1576.9728 1271.6022 1607.9609 1780.8254 1525.4662 1732.2534 190685338 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Cellvibrio japonicus Ueda107 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Cellvibrio;species:Cellvibrio japonicus; 1668.1167 1305.0865 1564.3555 1414.4206 1036.1572 94470881 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 564.7072 1024.03 999.9822 622.7443 801.1635 836.1222 787.3466 1102.0593 932.7447 939.2178 906.4174 56911575 alkJ Organic Remediation Other Hydrocarbons Bacillus clausii KSM-K16 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus clausii; 924.6793 624.2578 618.7813 411.7708 412.1089 592.4939 187928450 Catechol Organic Remediation Aromatics Other aromatics Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 1253.8915 1242.705 2105.9136 1205.6424 1414.9122 959.8497 1349.3117 2424.9579 1060.0532 1280.5684 2111.4743 1668.0272 49333363 exoglucanase_fungi Fungi function carbon degradation Volvariella volvacea superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Pluteaceae;genus:Volvariella; 768.1125 856.7839 759.1938 827.4127 1091.7469 737.0907 635.0147 1455.4056 762.3646 913.3374 968.0233 594.3478 209500047 cellobiase Carbon cycling Carbon degradation Cellulose Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 5316.3324 2465.9776 5004.142 3967.6191 4119.8502 3325.052 3137.1742 3738.453 2938.7792 3499.9226 6056.4103 4934.6096 42523158 pstS Stress Phosphate limitation Bdellovibrio bacteriovorus HD100 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Bdellovibrionales;family:Bdellovibrionaceae;genus:Bdellovibrio;species:Bdellovibrio bacteriovorus; 1901.1133 2050.9398 1591.4194 2124.1437 4835.6485 1676.211 4083.6649 1643.2639 2560.4013 1527.2576 2121.5647 1508.6175 163846858 obgE Stress Radiation stress Chloroflexus aurantiacus J-10-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aurantiacus; 567.2223 2088.25 968.7368 564.1043 1879.0796 1061.4029 1340.4911 2247.9692 1029.3233 1531.6684 1362.606 121589766 glnA Stress Nitrogen limitation Halorhodospira halophila SL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Halorhodospira;species:Halorhodospira halophila; 3446.2171 2091.2445 3006.7802 3844.8541 3796.5522 2653.2903 2091.5731 6043.627 2368.1822 2346.8974 4282.2895 3670.6705 255110064 sox Sulphur Sulphur oxidation Sideroxydans lithotrophicus ES-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Gallionellales;family:Gallionellaceae;genus:Sideroxydans;species:Sideroxydans lithotrophicus; 7600.2893 2751.6146 5215.1681 5609.4789 5565.1546 3376.8706 3918.3101 3096.6966 3629.1795 5672.3219 15230.6376 4170.0062 238716032 pstB Stress Phosphate limitation Yersinia bercovieri ATCC 43970 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia bercovieri; 740.6703 422.4932 627.9168 909.543 544.3899 599.5832 322.5685 4949.7117 901.233 731.9575 904.8519 118039822 silC Metal Resistance Silver Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 495.9876 781.7048 846.4162 711.0111 670.1426 739.0799 648.389 722.3709 772.406 694.5532 695.7284 927.3318 98976683 glnA Stress Nitrogen limitation Sphingopyxis alaskensis RB2256 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingopyxis;species:Sphingopyxis alaskensis; 2002.9704 2741.204 1931.8614 1780.3084 1139.978 2169.4694 2168.9398 2798.4836 2066.4514 2744.6463 1182.3467 2434.0862 239981200 SMR_antibiotics Antibiotic resistance transporter Streptomyces albus J1074 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces albus; 2423.5088 3025.3247 3024.4311 2285.7882 2031.3057 2982.2389 3039.1859 2853.0739 3924.5383 3333.1517 1581.9 3367.7898 118752393 trzA Organic Remediation Herbicides related compound Metallosphaera sedula DSM 5348 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Sulfolobales;family:Sulfolobaceae;genus:Metallosphaera;species:Metallosphaera sedula; 3868.9046 4744.9198 3101.7666 3334.4981 7107.8351 3875.8771 3207.7639 3289.7476 3874.4246 4192.0862 2738.3964 3586.8528 182633432 tfdA Organic Remediation Aromatics Chlorinated aromatics Beijerinckia indica subsp. indica ATCC 9039 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Beijerinckia;species:Beijerinckia indica; 882.6094 448.4626 542.6445 633.9625 370.1337 424.2571 912.4544 13517045 gyrB other category gyrB marine CFB-group bacterium MBIC04474 superkingdom:Bacteria;phylum:Bacteroidetes; 1337.8971 1834.1889 1198.5334 2010.194 1623.7325 1198.6717 1457.9577 914.8409 1499.8006 1777.7769 1425.8602 1183.5774 220717720 Catechol Organic Remediation Aromatics Other aromatics Variovorax paradoxus S110 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Variovorax;species:Variovorax paradoxus; 2358.2413 16470.1165 2858.9863 1469.3609 1103.1037 2809.6284 1851.765 2801.8607 2750.9196 2258.6601 930.1365 2302.8187 146191132 fnr Stress Oxygen stress Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1906.8086 5108.8599 4987.407 5255.7951 8370.616 3294.4365 2985.3103 4370.8528 10980.765 3282.7017 8162.8876 7248.1395 126720458 linB Organic Remediation Pesticides related compound Roseobacter sp. SK209-2-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 1325.0961 958.5332 955.9712 1293.0053 1174.4674 810.9449 914.2574 631.9762 1207.2725 1059.4951 915.0251 849.3458 126708356 dehH109 Organic Remediation Chlorinated solvents Sagittula stellata E-37 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 604.5877 766.8342 1274.6622 757.4046 697.6351 511.2171 653.5736 1605.3534 669.8721 720.3812 960.5036 1197.914 114225966 nitA Organic Remediation Aromatics Other aromatics Alkalilimnicola ehrlichei MLHE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Alkalilimnicola;species:Alkalilimnicola ehrlichii; 1766.0784 1692.5936 2124.7713 1371.0948 1908.9219 1672.9804 1537.5267 2649.3226 1513.5579 1541.908 1547.9052 2204.9208 107102033 ArsC Metal Resistance Arsenic Pseudomonas aeruginosa PACS2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 937.5341 1872.7861 1267.2034 917.967 1519.5309 824.5402 2800.8461 630.3214 1387.9009 875.472 1294.0132 725.2053 196479432 pcc Carbon cycling Carbon fixation Phenylobacterium zucineum HLK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Phenylobacterium;species:Phenylobacterium zucineum; 872.3521 544.6819 655.1804 936.9929 458.0303 616.1714 543.3048 522.6903 73762580 endochitinase Carbon cycling Carbon degradation Chitin Paecilomyces javanicus superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Cordycipitaceae;genus:Isaria; 2872.5237 1609.0726 2550.3421 2717.3561 2163.776 2011.359 2663.7195 2372.4798 1939.5595 2440.4052 1768.4271 1978.9138 83842486 hly virulence hemolysin Sulfitobacter sp. NAS-14.1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sulfitobacter; 2899.3345 1361.8479 2789.0514 2780.5839 2793.498 2347.5389 1123.2221 1730.5236 1704.2161 1402.5337 4263.7425 2447.5577 190688498 CysJ Sulphur sulfite reductase Cellvibrio japonicus Ueda107 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Cellvibrio;species:Cellvibrio japonicus; 928.0509 1532.3687 1875.2447 1286.0058 1907.0638 1854.5647 1566.7299 659.005 1198.3028 1169.2613 1554.6321 1251.4152 84368817 katE Stress Oxygen stress Xanthomonas oryzae pv. oryzae MAFF 311018 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas oryzae; 4157.6587 3609.9022 4206.0115 6061.9903 3191.7809 21990.0492 3529.2055 2416.2065 3886.0852 5036.1358 5539.7132 3752.323 115399816 ABC_multidrug_fungi Fungi function metal resistance Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 1733.7469 1053.529 2336.7861 1864.8084 1182.0852 1057.6353 1082.703 1104.1328 1130.9938 511.7388 99030634 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 1239.9354 581.6976 597.5457 1215.4088 629.8347 630.2534 984.1685 984.4526 655.7885 1032.3606 889.1833 119953925 esaT6 soil_borne_pathogen secretion system ESX-1 Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 961.1883 1380.6559 1077.2305 1014.7263 1096.9419 1330.3169 1357.2147 1602.6904 1114.7916 1375.4944 1038.5114 1515.6942 115399712 patulin_6MSAS Fungi function toxin Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 650.3247 714.0036 458.446 423.4446 766.7491 489.6984 377.498 595.4703 636.108 702.6956 260418101 pstC Stress Phosphate limitation Silicibacter lacuscaerulensis ITI-1157 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria lacuscaerulensis; 1776.0452 839.6834 734.1568 1554.8334 1194.2611 834.9497 1152.5629 1001.7496 1022.4737 986.6452 1043.7409 116070855 sigma_70 Stress Sigma factors Synechococcus sp. BL107 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 959.2944 1002.6862 635.8859 423.0408 694.0192 255519325 nirK Nitrogen Denitrification denitrifying proteobacterium D198b superkingdom:Bacteria;phylum:Proteobacteria; 524.279 488.8502 924.2986 739.3365 553.1895 660.8325 673.6942 632.3039 222111389 CadA Metal Resistance Cadmium Diaphorobacter sp. TPSY superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax ebreus; 3410.2722 3490.6064 3250.113 4214.6736 3161.6732 4072.7168 4687.71 10703.6872 3196.0138 3127.9794 3759.7543 7203.0974 92117399 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Nitrobacter hamburgensis X14 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter hamburgensis; 1205.6024 3089.9932 3025.856 1484.4282 2486.7896 3124.4134 2773.2258 2528.4857 3474.3186 3208.7686 1328.7287 3341.6984 145309489 gyrB other category gyrB Alicyclobacillus fastidiosus superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Alicyclobacillaceae;genus:Alicyclobacillus; 682.1726 491.7952 460.2609 34103393 pimF Organic Remediation Aromatics Aromatic carboxylic acid Chromobacterium violaceum ATCC 12472 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Chromobacterium;species:Chromobacterium violaceum; 679.8528 610.5712 888.7776 429.2389 1036.2767 542.7676 1000.9611 525.7824 46110921 cutinase_fungi Fungi function carbon degradation Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 920.1714 779.5787 1735.7819 1624.2799 1100.4388 2409.5622 804.3212 1481.7913 1115.9973 1073.4404 89055409 glnA Stress Nitrogen limitation Jannaschia sp. CCS1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Jannaschia; 795.4606 2274.5206 1397.0701 901.7218 961.002 1733.8825 1773.9854 2132.095 1707.6991 1589.6223 954.1611 1968.4635 282558706 phzF soil_benifit Streptomyces sp. ACTE superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 4673.3111 4316.9356 5572.7377 5408.0431 3296.2669 6020.0554 6149.5676 4212.5894 5197.3943 6419.67 4196.2814 4133.0112 166860392 B_lactamase_C Antibiotic resistance Beta-lactamases Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 2073.9064 1718.2699 1778.1791 1202.8345 1042.3194 1817.8471 2133.3362 1783.504 2270.1331 2407.453 2000.1578 239911664 pstB Stress Phosphate limitation Thermococcus gammatolerans EJ3 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Thermococcus;species:Thermococcus gammatolerans; 1143.4287 1678.0671 1876.0153 1155.5232 1686.815 1663.2404 1810.5571 1893.5928 2017.4424 2083.2247 167039832 nplT Carbon cycling Carbon degradation Starch Thermoanaerobacter sp. X514 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Thermoanaerobacter; 1128.501 841.5204 1110.5986 985.3725 1456.1303 1019.8543 970.083 1197.3425 962.6332 866.8291 1733.5433 1462.3441 159898137 srt virulence surface protein Herpetosiphon aurantiacus ATCC 23779 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Herpetosiphonales;family:Herpetosiphonaceae;genus:Herpetosiphon;species:Herpetosiphon aurantiacus; 1134.3307 788.5157 936.0593 1083.2277 1112.2138 926.5046 981.4328 1058.0466 752.4106 822.9115 1715.2846 1154.9592 254980038 katE Stress Oxygen stress Nitrosomonas sp. AL212 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas; 2288.5008 3413.017 2339.7376 2259.6396 3152.8949 3102.4426 2438.0542 3073.1901 2509.9847 3142.2389 2501.7781 2978.0932 149905944 cellobiase Carbon cycling Carbon degradation Cellulose Clostridium beijerinckii NCIMB 8052 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium beijerinckii; 951.2619 923.3383 940.4139 841.9595 1378.6237 851.0427 741.3896 725.2033 705.9139 941.354 1831.9 938.9631 39650178 CadA Metal Resistance Cadmium Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1432.2053 1489.2777 1048.7695 1221.0111 3032.2554 1929.6752 941.0735 1378.8981 2396.8502 1127.2392 1515.0395 1084.5086 256672178 B_lactamase_C Antibiotic resistance Beta-lactamases Streptomyces sp. AA4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 1743.7808 1802.0267 914.8099 1211.421 943.4721 1168.9701 943.4395 867.3649 2391.0487 1104.3143 89068265 ppx Phosphorus Phosphorus utilization Oceanicola granulosus HTCC2516 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola granulosus; 3943.1718 3122.1809 3476.8417 4202.7431 4901.7225 3938.0803 4455.4379 2856.9351 3477.4405 3256.0585 5085.8164 3760.2603 189193725 tre_fun soil_benifit Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 2267.7207 1622.8855 1934.4495 1815.5837 1284.4422 1799.3412 1399.3104 2259.1051 1523.5819 1834.374 1697.0019 1663.6054 6689357 xylanase Carbon cycling Carbon degradation Hemicellulose Thermoascus aurantiacus superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Thermoascus; 1238.9414 475.1571 657.6936 920.1997 998.104 588.7393 572.307 564.2196 463.37 900.6635 768.6911 1009.9456 109455731 vanA Carbon cycling Carbon degradation Others Roseobacter denitrificans OCh 114 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter denitrificans; 5634.8756 2742.2361 2085.2385 4228.6177 3002.4131 1646.8967 2335.8545 2596.0033 2146.2932 2276.0239 4574.789 1820.3189 34105604 glnA Stress Nitrogen limitation Chromobacterium violaceum ATCC 12472 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Chromobacterium;species:Chromobacterium violaceum; 8486.2299 5811.7903 8878.5078 8548.0089 6533.6645 6328.1101 5698.7417 10889.0157 7771.5529 6378.7115 11801.678 7215.3971 283843001 arsM Metal Resistance Arsenic Rhodopseudomonas palustris DX-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1917.541 2369.1341 2905.7453 1045.2581 1120.4896 2419.9573 1618.9882 2884.9807 2294.1998 2142.0935 2288.4959 94471315 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 5085.911 4588.0802 4033.5441 5481.5257 5125.7673 4990.8933 4794.9643 4714.9773 5143.8635 5719.2545 4089.6202 3815.7161 167645857 pimF Organic Remediation Aromatics Aromatic carboxylic acid Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 7535.4382 8505.0313 6295.7136 10729.0384 8028.2447 8280.1151 6857.5903 6249.4601 5791.9094 7401.4131 6954.2578 7873.648 254784984 ahpF Stress Oxygen stress Teredinibacter turnerae T7901 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;genus:Teredinibacter;species:Teredinibacter turnerae; 601.9953 1317.937 1082.6828 1054.5313 735.6489 920.1707 1231.868 1162.5791 1178.22 1289.7696 979.6032 1311.9337 26988702 MFS_antibiotic Antibiotic resistance transporter Pseudomonas putida KT2440 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 4801.697 4945.8572 8542.3694 2668.9901 2540.9949 5342.0719 4824.7907 7289.6287 5655.4538 5433.974 1566.2119 7433.4301 111017380 oxdB Organic Remediation Aromatics Nitoaromatics Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 5645.111 3751.5102 2483.5477 3884.9057 4452.9692 2910.3291 3393.4324 3107.542 3676.0898 3903.7349 4501.7302 3083.1457 86360776 rubisco Carbon cycling Carbon fixation Rhizobium etli CFN 42 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 4753.5557 3855.5404 3994.8981 3773.627 3284.1139 3868.5186 3397.8829 5584.6814 3339.8549 3372.0556 6180.1851 18520.3352 83846326 ppx Phosphorus Phosphorus utilization Sulfitobacter sp. EE-36 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sulfitobacter; 4990.7298 10686.442 6067.6472 5986.8046 11398.4728 4841.9486 8230.3586 5432.2281 4920.0797 4299.4256 8254.1811 5037.2589 163761275 pstB Stress Phosphate limitation Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 1414.2731 541.5982 994.8643 1012.6443 709.2122 574.4864 691.4687 708.3252 959.6447 895.5414 206580643 ohbAB Organic Remediation Aromatics Aromatic carboxylic acid Klebsiella pneumoniae 342 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella pneumoniae; 2649.8564 2831.2811 1878.298 1955.8833 2605.7607 2311.4644 2203.0063 1838.2032 3332.551 1759.6761 1546.728 1194.2474 94983853 gyrB other category gyrB Spiroplasma turonicum superkingdom:Bacteria;phylum:Tenericutes;class:Mollicutes;order:Entomoplasmatales;family:Spiroplasmataceae;genus:Spiroplasma; 1030.7676 1502.5894 1107.051 1030.8346 1598.3268 1178.4957 1508.3808 607.9647 1171.0676 995.6006 1425.7881 830.3677 225872268 glnA Stress Nitrogen limitation Acidobacterium capsulatum ATCC 51196 superkingdom:Bacteria;phylum:Acidobacteria;class:Acidobacteria;order:Acidobacteriales;family:Acidobacteriaceae;genus:Acidobacterium;species:Acidobacterium capsulatum; 4147.4636 5438.9813 6842.0929 3097.4076 3780.7968 2624.1106 3558.5464 10403.6949 4309.0114 4439.8027 7262.3734 5215.9579 91782493 ChrA Metal Resistance Chromium Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 1507.0635 3451.13 1896.3269 2357.0153 3370.1333 3411.4096 3132.7027 2334.3211 2468.4446 2884.7406 1689.7945 2846.0704 77979340 CopA Metal Resistance Copper Yersinia intermedia ATCC 29909 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia intermedia; 1015.1862 646.3194 1737.8611 971.8531 745.2207 1615.4241 832.9455 795.8217 885.297 30248392 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Nitrosomonas europaea ATCC 19718 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas;species:Nitrosomonas europaea; 3026.901 18303.7578 3585.3354 3310.5274 3093.1534 2724.4823 2281.2677 2884.1455 2426.9161 2491.9607 4844.1288 4284.3829 184207733 exaA Organic Remediation Chlorinated solvents bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3;genus:Pedosphaera;species:Pedosphaera parvula; 2090.1192 716.3628 1104.0413 1495.0711 1668.8373 986.4868 1068.532 1042.5104 811.0548 1049.3448 2419.1574 1669.6613 118702001 mauAB Organic Remediation Herbicides related compound Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 7076.6043 4680.1494 7115.8423 1434.6377 4715.5399 4012.9964 4163.36 12466.154 5414.1227 4752.6308 6509.9228 6014.0271 266625112 cat_bac soil_benifit Clostridium hathewayi DSM 13479 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium hathewayi; 380.1228 866.8378 1058.5988 788.0738 189341661 BchY other category chlorophyllide reductase Chlorobium limicola DSM 245 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium limicola; 1297.7614 556.5311 883.9135 1079.7759 1236.958 809.9877 812.2183 722.1651 583.0176 917.6588 1293.4847 1194.4946 227197854 amyA Carbon cycling Carbon degradation Starch Corynebacterium striatum ATCC 6940 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium striatum; 373.3394 1600.2611 552.6313 710.6002 710.185 972.413 1529.0272 596.0386 1439.9833 1080.6667 800.4757 541.2724 83576724 proV Stress Osmotic stress Rhodospirillum rubrum ATCC 11170 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum rubrum; 1873.3353 1319.224 1532.4472 1864.5482 1183.4921 1520.86 1841.5336 1535.1318 1518.9386 1249.0151 4173.6315 148831448 aclB Carbon cycling Carbon fixation Erythrobacter sp. SD-21 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 1757.1057 1706.1007 1810.4761 1892.6281 2517.4471 1598.0644 1325.0063 1799.9901 1547.8291 1746.0754 1889.4149 1506.1365 167646252 CadA Metal Resistance Cadmium Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 1930.248 684.7977 1043.6055 1622.3622 1247.253 927.933 977.9631 1697.7816 839.0612 1074.5698 1975.2789 1537.2678 157376939 CysJ Sulphur sulfite reductase Shewanella sediminis HAW-EB3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella sediminis; 766.0574 1420.9967 981.7642 1347.3594 820.7861 975.9653 724.9612 816.1012 525.9286 889.4148 909.4934 145294198 cadBD Metal Resistance Cadmium Corynebacterium glutamicum R superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium glutamicum; 4127.5435 4163.8593 4560.4987 3868.5372 3519.0415 4357.0209 3543.4286 5141.3745 4148.6056 4005.104 3540.674 5390.7845 68514168 gyrB other category gyrB Shewanella amazonensis SB2B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella amazonensis; 555.1971 668.0794 409.0212 670.1615 495.5879 474.5807 538.8448 657.9942 650.2404 62422741 cadBD Metal Resistance Cadmium Brevibacterium linens BL2 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Brevibacteriaceae;genus:Brevibacterium;species:Brevibacterium linens; 1664.6109 553.6654 675.2719 1923.4475 1189.9763 720.7286 1605.3272 832.4027 587.4675 862.7869 775.4661 1058.1187 47571436 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Rubrivivax gelatinosus PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 5408.5414 1838.3939 2464.8499 3835.896 2383.4601 2422.5896 2876.1366 1439.5248 3133.2494 3449.0929 5834.0146 2922.7107 170655523 narH Stress Oxygen limitation Methylobacterium radiotolerans JCM 2831 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium radiotolerans; 3307.6629 820.8627 2272.4925 2911.1624 1538.7938 1155.4779 1418.7869 1109.9255 1422.405 1829.6228 2384.8984 2364.3671 217501870 ChrA Metal Resistance Chromium Methylocella silvestris BL2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Methylocella;species:Methylocella silvestris; 5486.6367 5335.4226 7729.0451 3713.4538 3767.6958 6315.9955 5317.999 7165.9472 7619.0218 5891.6756 1753.5318 6327.5092 169886169 pstB Stress Phosphate limitation Synechococcus sp. PCC 7002 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 852.6285 1198.5902 1075.6602 785.2243 1344.3259 1071.3189 998.6439 754.6409 906.858 999.0399 958.1973 1242.0497 310821233 cat_bac soil_benifit Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 4583.5565 3222.6687 3746.9417 4569.0286 4709.9468 3377.07 2678.0917 4532.7475 3359.7513 3197.1108 6027.0042 4084.9755 157372795 tfdA Organic Remediation Aromatics Chlorinated aromatics Serratia proteamaculans 568 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Serratia;species:Serratia proteamaculans; 2387.47 2475.0502 2140.8956 1344.7271 1829.2288 1764.7978 5723.5053 2635.1641 2585.1001 2823.972 1750.6135 182634092 nmoA Organic Remediation Aromatics Nitoaromatics Beijerinckia indica subsp. indica ATCC 9039 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Beijerinckia;species:Beijerinckia indica; 2697.9844 1722.3857 1541.7961 2381.2873 1350.1085 2287.7587 2560.6595 2370.5007 1873.9294 2609.5881 1130.1173 2189.5268 223894499 xylA Carbon cycling Carbon degradation Hemicellulose bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3;genus:Pedosphaera;species:Pedosphaera parvula; 592.0688 527.1211 733.8844 576.5906 556.0193 368.2745 512.7634 711.945 502.3963 149202711 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 1526.8895 1803.989 849.1205 1770.1722 2565.2252 1219.8648 2649.2899 988.8706 1180.5343 1201.778 1382.3757 1342.2684 116671432 groEL Stress Heat shock Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 1593.2451 2617.856 2752.3101 2780.2551 1522.4507 1727.4662 1746.5601 3669.5192 6010.7114 1792.8963 1421.9442 3130.5498 260770155 iro virulence Iron oxidation Vibrio furnissii CIP 102972 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio furnissii; 620.6662 555.01 540.6506 440.9006 259.9724 429.0596 221736800 MFS_antibiotic Antibiotic resistance transporter Agrobacterium vitis S4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium vitis; 776.548 361.8385 498.1513 312.158 52784430 groEL Stress Heat shock Bacillus licheniformis ATCC 14580 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus licheniformis; 1473.7245 823.5768 1122.2884 1655.0582 801.9504 1559.866 1704.0858 1322.8033 1067.7299 1554.4814 865.2221 1029.4043 84515312 proV Stress Osmotic stress Loktanella vestfoldensis SKA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Loktanella;species:Loktanella vestfoldensis; 2722.9281 4435.1356 2600.8377 1774.487 6174.9122 3052.2344 3219.8305 4388.3556 3759.7408 3463.4195 2217.4035 154248509 CopA Metal Resistance Copper Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 1052.1966 1518.0971 1418.3995 1273.5822 24135.6994 1336.3742 1835.6379 1134.3398 1408.6476 1548.3622 1706.8039 1307.3608 255057591 pstC Stress Phosphate limitation Geobacter sp. M18 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 2165.0177 2022.7915 2543.9011 2051.5605 2150.5422 1901.3331 1647.2279 2322.0836 1915.7724 1761.9987 2980.5884 2474.3083 42565770 cat_bac soil_benifit uncultured Pseudomonas sp. superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1331.9735 777.4762 1451.2006 1665.0848 13431.9923 1600.1034 1700.6562 1402.1105 1205.7348 1656.5875 2344.3686 975.752 148502366 bphA Organic Remediation Aromatics Polycyclic aromatics Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 741.2387 807.2218 778.1689 2245.9655 716.2118 1260.1307 632.6177 813.2239 577.9195 169761742 CopA Metal Resistance Copper Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 4348.4779 6842.3699 4968.1277 4714.3045 8219.8498 5934.311 4746.0246 5998.5709 5669.7004 6257.8235 3947.3144 5712.4785 159139492 cspA Stress Cold shock Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 2221.9303 719.381 1511.5249 1716.7519 1259.3492 1032.9411 1128.9572 927.7078 1096.3746 1599.5157 1220.594 1529.921 170934034 dsrA Sulphur sulfite reductase Thermoproteus neutrophilus V24Sta superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Thermoproteales;family:Thermoproteaceae;genus:Thermoproteus;species:Thermoproteus neutrophilus; 3168.0387 4088.9288 3276.6572 3750.1129 4152.9273 3699.1985 4324.6582 4208.7726 3005.1615 3581.4637 3081.6199 3448.7145 70731834 glnA Stress Nitrogen limitation Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 3146.1933 4017.4856 2853.534 2438.858 5246.0845 3133.1479 2938.397 4461.5622 2985.8437 3545.9619 3812.2241 3376.2627 124485292 pstB Stress Phosphate limitation Methanocorpusculum labreanum Z superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanomicrobiales;family:Methanocorpusculaceae;genus:Methanocorpusculum;species:Methanocorpusculum labreanum; 2566.047 2736.3941 2510.9919 2351.8409 7172.8473 4366.7724 3651.7878 2804.9144 2101.2406 2312.9229 3363.0718 2830.3443 156532308 tfdA Organic Remediation Aromatics Chlorinated aromatics Enterobacter sakazakii ATCC BAA-894 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Cronobacter;species:Cronobacter sakazakii; 7079.9758 3292.9712 9739.7542 4950.6416 5401.2683 4285.4252 4992.9557 13387.0954 5382.2163 5448.8924 12549.7561 7878.4543 227219643 pstB Stress Phosphate limitation Atopobium vaginae DSM 15829 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Coriobacteriales;family:Coriobacteriaceae;genus:Atopobium;species:Atopobium vaginae; 9438.9991 8425.4667 7637.4318 7733.3712 7421.119 6762.7427 5676.6305 7123.1404 7216.4017 7109.4256 6746.6125 6329.2395 3334811 vanA Carbon cycling Carbon degradation Others Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 5495.9453 3347.431 2734.7464 4079.164 3234.7812 3343.6631 2324.7829 2597.9924 2906.6827 5466.1739 2798.0072 154155244 tfdA Organic Remediation Aromatics Chlorinated aromatics Parvibaculum lavamentivorans DS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Parvibaculum;species:Parvibaculum lavamentivorans; 1891.2406 1551.4443 1126.7374 2483.2243 1422.1336 2998.9828 5226.7943 1484.1793 1562.2868 1444.6715 197093940 dmsA Organic Remediation Others Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 591.733 531.3472 859.6567 1019.7007 724.9313 617.8668 436.9182 752.6494 828.9525 192897630 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 896.3506 764.079 901.9409 660.7398 409.6488 392.9674 494.5789 647.1181 807.7311 740.1736 212636204 pcc Carbon cycling Carbon fixation Shewanella piezotolerans WP3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella piezotolerans; 1532.8266 1610.7467 842.1053 1122.1254 1165.8225 1208.5753 772.7671 1265.0582 1067.9098 112802902 merP Metal Resistance Mercury Campylobacter curvus 525.92 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Campylobacteraceae;genus:Campylobacter;species:Campylobacter curvus; 1147.8301 1300.9767 1380.0589 1137.1548 1840.933 1190.6551 915.7371 1083.6834 876.862 1228.5551 1766.9135 1276.9848 51599250 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae; 13382.45 10712.0418 13301.8991 13726.2212 9493.0016 11550.8757 14448.6902 7001.3049 10600.0778 11338.7144 11731.2619 10464.6538 161787520 obgE Stress Radiation stress Gluconacetobacter diazotrophicus PAl 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter;species:Gluconacetobacter diazotrophicus; 2283.6114 957.529 1713.9291 1765.337 1342.6006 1241.6411 1694.4279 1184.9599 2148.4483 1930.6121 2240.2222 1097.6367 217973255 B_lactamase_C Antibiotic resistance Beta-lactamases Shewanella baltica OS223 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella baltica; 1084.2953 1309.5014 1148.8084 1330.3173 773.7183 1153.07 2607.3892 616.0625 1069.0578 1073.9891 1322.146 623.0208 iegcoxL25 CODH Carbon cycling Carbon fixation 1507.4933 671.4562 1410.9553 1261.7064 1008.8748 911.1969 838.9152 1110.4823 1160.8398 936.2844 2182.1788 963.9285 6686566 cda Carbon cycling Carbon degradation Starch Alicyclobacillus acidocaldarius superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Alicyclobacillaceae;genus:Alicyclobacillus; 885.6048 657.1142 892.1314 922.3265 550.6087 642.2607 221632805 sigma_70 Stress Sigma factors Thermomicrobium roseum DSM 5159 superkingdom:Bacteria;phylum:Chloroflexi;class:Thermomicrobia;order:Thermomicrobiales;family:Thermomicrobiaceae;genus:Thermomicrobium;species:Thermomicrobium roseum; 1715.1432 484.2948 677.9032 1215.0787 632.0378 932.0248 976.9479 558.7878 635.8958 799.4973 68233203 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 3532.3718 1743.3727 2503.6703 3346.2094 2405.529 2152.2996 2171.4059 1089.4975 1886.1375 1981.6205 3483.4714 2761.6577 188572653 mcrA Carbon cycling Methane Methane production uncultured archaeon superkingdom:Archaea; 442.6614 305.4917 468.3555 78694823 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2604.1329 5129.3755 4517.9997 3559.7265 2788.7391 5655.8897 4827.9106 4835.8021 5442.4646 4689.7637 1889.1987 5958.9055 167830624 pstB Stress Phosphate limitation Finegoldia magna ATCC 29328 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XI. Incertae Sedis;genus:Finegoldia;species:Finegoldia magna; 646.4293 379.6827 349.0347 660.4603 89896919 CODH Carbon cycling Carbon fixation Desulfitobacterium hafniense Y51 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium;species:Desulfitobacterium hafniense; 572.4576 1032.0196 671.6225 717.1613 683.3194 1008.0837 742.0664 1141.4813 753.1736 830.5494 861.9066 918.7628 116612897 CadA Metal Resistance Cadmium Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 3980.433 3078.9964 3162.309 2051.2044 857.0089 3464.5643 2607.9168 3745.8003 2886.4666 2837.8638 2176.4609 3083.9422 184199347 nirK Nitrogen Denitrification denitrifying uncultured denitrifying bacterium superkingdom:Bacteria; 525.5685 557.2008 581.5259 623.6922 431.0752 445.9562 573.2297 23494189 ChrA Metal Resistance Chromium Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 566.0134 2091.8688 1472.5155 982.2084 1317.574 1842.1809 1713.3538 1408.1021 2098.9752 1903.0087 829.4974 2233.6214 83316658 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 3396.0609 2717.248 2538.8559 2453.2404 2153.0449 2277.9025 1468.0515 1850.4044 2701.8077 1851.4755 3506.5831 2522.756 23491952 nagG Organic Remediation Aromatics Aromatic carboxylic acid Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 1193.4686 2108.0646 2006.7543 1243.3636 2534.6814 1553.3487 1616.5565 2378.9092 1667.2773 2008.8331 2234.4362 270345263 cat_bac soil_benifit Dickeya dadantii Ech586 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Dickeya;species:Dickeya dadantii; 562.4538 297.8367 462.1391 588.3087 475.6359 534.5368 282.8004 438.1156 548.5537 154251518 pimF Organic Remediation Aromatics Aromatic carboxylic acid Parvibaculum lavamentivorans DS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Parvibaculum;species:Parvibaculum lavamentivorans; 2324.1098 2326.6759 2183.6417 1991.0791 2591.9441 2446.1906 2088.9005 2206.512 1901.0831 2379.9333 2756.8833 1975.6387 281316822 gyrB other category gyrB Victivallis vadensis ATCC BAA-548 superkingdom:Bacteria;phylum:Lentisphaerae;family:Victivallaceae;genus:Victivallis;species:Victivallis vadensis; 3981.3598 1774.9488 2166.6887 3070.8207 1585.3205 3434.9807 3055.726 3013.1529 2582.7672 2879.7157 1762.1806 2400.8265 214042877 alkB Organic Remediation Other Hydrocarbons Roseobacter sp. GAI101 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 667.7061 2128.4655 1447.8274 582.9247 1739.3288 1029.9697 1808.6828 628.8083 1304.9138 848.3822 1184.3488 639.6369 167625936 SMR_antibiotics Antibiotic resistance transporter Shewanella halifaxensis HAW-EB4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella halifaxensis; 974.7818 972.1041 1317.4228 838.042 1230.1397 1015.4134 1358.4141 1051.2466 953.4585 923.711 111222817 bphA Organic Remediation Aromatics Polycyclic aromatics Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 4722.9435 2513.0995 3052.754 4022.9083 2887.1581 3520.6653 2588.0848 3755.871 3541.0903 3117.3266 4375.577 4598.8537 145296438 ChrA Metal Resistance Chromium Corynebacterium glutamicum R superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium glutamicum; 1885.3035 869.6794 1106.862 1493.0713 844.6079 1877.7619 1562.8873 1172.323 1003.4743 1452.3531 1335.1672 861.084 68445596 CODH Carbon cycling Carbon fixation uncultured crenarchaeote 10-H-08 superkingdom:Archaea;phylum:Thaumarchaeota;genus:Candidatus Caldiarchaeum; 1006.8178 1531.8718 1509.8383 1334.3718 1966.4072 1116.8458 1465.0463 835.5942 1002.6822 995.9356 1859.6485 2214.0116 82701138 gyrB other category gyrB Nitrosospira multiformis ATCC 25196 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosospira;species:Nitrosospira multiformis; 8142.6183 5596.3136 5838.9556 2675.6334 2833.1992 5477.202 5787.2689 6170.6855 6010.6997 5178.2847 1979.4832 5813.219 254255408 cat_bac soil_benifit Burkholderia dolosa AUO158 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia dolosa; 1692.0665 2534.558 2192.3509 1698.8492 4452.5711 2618.0085 2446.0375 3213.4302 2995.2444 3377.2257 1317.7495 2416.0831 67903834 glucoamylase_fungi Fungi function carbon degradation Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 735.7718 826.0999 771.6775 850.2389 1026.9436 662.4515 464.3225 765.5099 1011.1667 954.065 756.0456 206684172 catB Organic Remediation Aromatics BTEX and related aromatics Rhodobacterales bacterium Y4I superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales; 6502.3372 6611.2109 7632.9422 6772.7424 6747.7059 5905.1653 5465.8702 9343.848 6444.8657 7456.4453 7062.741 8723.3284 19909763 gyrB other category gyrB Rhodomicrobium vannielii superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Hyphomicrobiaceae;genus:Rhodomicrobium; 3965.8455 1240.2584 2387.6743 2919.2028 1434.4785 1508.2369 1795.8018 2464.442 2189.9651 1980.247 3405.2233 2025.6587 121701793 ABC_multidrug_fungi Fungi function metal resistance Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 696.4243 1099.6953 1014.6671 853.9037 1465.1929 742.0861 990.1445 1122.5502 758.1827 1069.556 1168.797 933.7585 119955433 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 4222.8053 1292.3245 2915.036 3369.9883 2051.4218 2138.2257 2001.4859 2342.2736 1815.9061 2291.2326 4906.1604 1985.3131 191639724 SMR_antibiotics Antibiotic resistance transporter Lactobacillus casei BL23 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus casei; 542.4933 448.2102 655.5361 746.0388 377.3485 325.3162 528.3841 595.7524 782.0161 254970956 sox Sulphur Sulphur oxidation Acidithiobacillus caldus ATCC 51756 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus;species:Acidithiobacillus caldus; 1660.017 2507.1869 2527.9222 1779.2674 2392.409 2336.8901 2663.903 2482.2595 2194.0772 3561.9187 1975.0627 2346.1031 161485963 catB Organic Remediation Aromatics BTEX and related aromatics Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 4330.2503 4272.2092 4791.9673 5311.6125 4921.0043 4955.4818 3571.8059 3445.8564 3487.1673 4375.4728 7599.1502 4502.4663 78692510 CopA Metal Resistance Copper Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2139.0799 1577.2904 3598.0574 815.8383 1301.5911 1604.1516 1908.6229 4063.5495 2249.363 2099.5382 908.4663 2353.2302 55377009 P450 Energy process Energy process Haloarcula marismortui ATCC 43049 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloarcula;species:Haloarcula marismortui; 7033.0165 4560.1273 2277.5086 7152.464 4821.0686 2295.0424 6586.3997 2970.8605 2636.4106 3793.7231 4397.9439 3434.7488 118007278 alkB Organic Remediation Other Hydrocarbons Pseudomonas mendocina ymp superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas mendocina; 4495.0914 3058.4809 2539.6701 4332.6504 2609.2302 1798.1048 2546.8838 1465.1738 1872.3568 2167.5419 3316.5965 2382.8509 189188426 Catechol Organic Remediation Aromatics Other aromatics Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 1069.587 828.1577 1433.7387 653.7144 724.1203 776.7848 741.728 1011.8325 814.0743 763.2436 19526.0427 1012.9392 67549530 ChrA Metal Resistance Chromium Burkholderia vietnamiensis G4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia vietnamiensis; 3291.1815 2672.4451 3252.0758 3245.6011 3812.5161 3113.7496 2179.7218 3391.2903 2346.4103 2621.3762 5579.3538 3425.4794 115386048 sidA Fungi function iron Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 2805.3487 1067.4948 1691.9745 2529.4397 1371.931 1632.1049 1923.9013 2638.0657 1512.0436 2123.7135 1326.086 1688.9415 218761931 fnr Stress Oxygen stress Desulfatibacillum alkenivorans AK-01 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfatibacillum;species:Desulfatibacillum alkenivorans; 2181.8215 1623.5799 1696.9906 3094.7914 1530.262 1414.0422 1489.042 1320.0435 1613.5874 1993.5909 1732.3181 1889.4613 167037321 GcdB Organic Remediation Aromatics Aromatic carboxylic acid Thermoanaerobacter pseudethanolicus ATCC 33223 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Thermoanaerobacter;species:Thermoanaerobacter pseudethanolicus; 1835.2951 1437.7935 1986.8789 1490.1674 2678.4326 1477.8458 1285.9158 1569.1011 1410.5697 1205.8872 2621.853 2051.9287 3451441 xylF Organic Remediation Aromatics BTEX and related aromatics Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 741.0507 1706.2919 1345.9973 890.7624 2784.7387 1158.3047 1694.0265 714.3618 1216.0791 1356.2128 119773158 gyrB other category gyrB Shewanella amazonensis SB2B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella amazonensis; 750.5833 651.4138 876.5183 690.7528 540.0078 675.8602 542.6224 481.2628 997.3942 104779489 nmoA Organic Remediation Aromatics Nitoaromatics Pseudomonas entomophila L48 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas entomophila; 1925.5467 810.1717 1101.2643 1556.2854 756.5789 1044.0985 2007.5881 1598.4055 1008.7629 1330.2145 869.0659 838.4285 153009769 ureC Nitrogen Ammonification Ochrobactrum anthropi ATCC 49188 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum;species:Ochrobactrum anthropi; 2389.2232 4692.5926 3660.0974 2739.9022 3505.3527 3825.9232 3328.207 3233.5132 3693.8486 4194.6935 3386.7841 4454.7029 91703634 ArsC Metal Resistance Arsenic Mycobacterium sp. MCS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 2673.2286 5689.449 5645.3915 4340.2388 3622.9587 6596.7849 5548.4932 5108.1362 7647.4801 5947.3255 2388.7423 5819.7418 84616576 movement_Furovirus soil_borne_pathogen virulence movement protein French barley mosaic virus superkingdom:Viruses;family:Virgaviridae;genus:Furovirus; 7517.8284 8768.7894 9063.7408 7386.8149 6494.3235 9972.0451 9305.5204 7281.1557 11533.0411 10268.2985 6510.8597 9399.6553 159141275 fnr Stress Oxygen stress Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 2457.2507 7491.6286 5484.9628 3863.6198 3617.0623 7166.6493 7364.1729 5735.7185 8204.8934 7876.4339 2745.1473 3799.2053 161729057 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae; 629.8038 899.7646 1089.56 602.4847 938.1368 884.7841 606.3506 723.0406 687.4581 563.5817 1208.918 1118.0054 157319195 pilin virulence pilin Shewanella sediminis HAW-EB3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella sediminis; 775.4868 365.0524 576.8253 3776049 tre_fun soil_benifit Encephalitozoon cuniculi superkingdom:Eukaryota;kingdom:Fungi;phylum:Microsporidia;family:Unikaryonidae;genus:Encephalitozoon; 1348.9788 2347.2169 2168.1862 1430.9256 1570.1339 2274.2232 1887.793 2342.5157 2505.4299 2229.1695 926.1485 2248.4661 109290305 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 4201.1928 7281.5038 5991.0968 5004.0757 4060.8861 6605.2651 10192.2952 14039.2978 5673.9989 5486.9588 5394.2923 3400.0883 109452440 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1786.0254 1725.291 1252.4022 1805.2379 3487.7393 1518.123 2380.9325 1639.7658 1669.7469 1522.1099 2367.1281 2372.2632 124008345 iuc virulence aerobactin Microscilla marina ATCC 23134 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Microscilla;species:Microscilla marina; 2185.2736 2646.6415 2460.9242 2275.6657 999.414 2609.0048 3853.2853 2139.2849 2398.1549 2414.4656 885.3066 3841.652 68164616 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 677.1797 534.8064 440.4706 526.2032 514.2218 1161.5502 601.7608 470.409 138896173 obgE Stress Radiation stress Geobacillus thermodenitrificans NG80-2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus;species:Geobacillus thermodenitrificans; 2234.5432 1039.9327 1515.4942 1913.5579 1568.1242 1391.4882 1196.6659 2583.4391 1350.0069 1567.2559 2148.1599 1871.6092 239817212 ureC Nitrogen Ammonification Variovorax paradoxus S110 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Variovorax;species:Variovorax paradoxus; 1117.1776 483.3136 635.0286 967.5247 628.0294 689.6288 623.0783 714.6863 602.6421 108798432 CopA Metal Resistance Copper Mycobacterium sp. MCS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 1241.0905 522.4843 751.2988 1049.5454 749.2037 647.2585 598.2871 671.3631 900.2503 1235.2971 730.4898 262069080 chitin_synthase Fungi function major biomolecule Gibberella moniliformis superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella; 869.4726 983.2793 954.6481 1181.9731 592.5413 503.1258 594.0316 765.2684 728.0702 899.2453 811.5991 631.4546 302679170 p450aro Fungi function organic remediation Schizophyllum commune H4-8 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Schizophyllaceae;genus:Schizophyllum;species:Schizophyllum commune; 1343.1626 790.2933 717.744 853.738 1069.2549 986.3937 828.5539 723.4631 1341.7191 157913480 nirS Nitrogen Denitrification Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 3351.9358 2443.8692 3767.1662 1761.6387 2211.8005 1612.6468 1819.8204 5968.9557 2223.8868 2233.0777 4292.8603 2855.5595 256363168 ABC_antibiotic_transporter Antibiotic resistance transporter Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 1463.0055 1847.7852 2025.3067 1427.2684 2216.1043 1938.8285 1441.9682 1338.0184 1574.2839 1484.9033 2344.4409 1723.7531 37726855 dsrA Sulphur sulfite reductase uncultured prokaryote 4579.7821 7893.1338 6062.1804 5647.8593 9498.9359 7801.2745 7107.1939 4171.8344 8508.5928 8186.9728 4804.5363 7039.1881 12484563 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Pseudomonas fluorescens superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 2141.1619 797.2762 1119.0315 2111.2543 845.7217 570.1594 881.3379 1020.4628 859.2139 1113.0494 1758.0004 1224.8568 70995390 cah Organic Remediation Others Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 2001.0765 1620.3816 2015.478 1867.863 1850.4317 1743.8134 1258.284 1606.588 1604.6876 2017.9003 3159.4996 2232.1521 93453002 CopA Metal Resistance Copper delta proteobacterium MLMS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria; 685.7456 898.8853 742.2698 848.9863 1199.9869 752.75 852.7885 476.9204 861.6252 1119.2356 688.7132 511.3789 148474836 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 430.1852 450.8455 718.4541 415.8014 497.4025 501.0021 505.5592 466.9579 548.3173 83592439 phzF soil_benifit Rhodospirillum rubrum ATCC 11170 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum rubrum; 9340.9404 4657.9137 5591.2319 7748.1282 6159.081 6025.7687 4812.2767 6642.1711 5556.6824 5168.7597 10544.2303 6352.2961 6910981 mnp Carbon cycling Carbon degradation Lignin Dichomitus squalens superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Polyporaceae;genus:Dichomitus; 747.2656 1030.2866 787.8656 1068.2289 1273.1989 2287.1863 825.7414 1210.5691 1007.2696 753.6176 159890846 sigma_32 Stress Sigma factors Herpetosiphon aurantiacus ATCC 23779 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Herpetosiphonales;family:Herpetosiphonaceae;genus:Herpetosiphon;species:Herpetosiphon aurantiacus; 2730.0607 1997.469 2405.7082 2990.6389 747.1198 1576.0662 1572.0191 121605013 cbdA Organic Remediation Aromatics Chlorinated aromatics Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 412.5351 677.0712 558.683 530.0044 242766628 MFS_antibiotic Antibiotic resistance transporter Talaromyces stipitatus ATCC 10500 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus; 421.0647 473.1566 731.8191 500.1249 409.4356 384.1817 150027321 dehH109 Organic Remediation Chlorinated solvents Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 2034.0259 2968.1361 3067.8169 2951.2687 3332.328 2780.9871 1913.3487 2833.1623 3937.2822 2104.7082 3323.2994 3800.4137 146406440 Catechol Organic Remediation Aromatics Other aromatics Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 852.5479 577.62 478.2198 866.2315 679.0005 567.9464 836.9257 829.5557 782.7346 762.626 114226466 atzA Organic Remediation Herbicides related compound Alkalilimnicola ehrlichei MLHE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Alkalilimnicola;species:Alkalilimnicola ehrlichii; 1762.0756 2818.6277 3009.5572 2143.6626 2915.1424 1948.9987 2295.8234 4289.7663 2431.6456 2788.229 2668.3887 3623.4861 83857396 ZntA Metal Resistance Zinc Croceibacter atlanticus HTCC2559 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Croceibacter;species:Croceibacter atlanticus; 933.3969 594.824 658.0883 876.1061 707.5319 510.9312 678.7471 645.0463 822.9003 219939022 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2049.5671 1744.7043 2390.7058 1683.7614 2397.7651 1458.0586 2106.7597 3112.4927 1905.0787 2033.7901 2058.5722 2015.9774 91721366 TerZ Metal Resistance Tellurium Psychrobacter sp. PRwf-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Psychrobacter; 1140.9393 1787.7423 2380.201 1314.7158 2023.5512 1367.2739 1363.271 2489.1105 1629.2319 2273.4445 1076.5904 2313.2416 78693599 atzA Organic Remediation Herbicides related compound Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 3128.2074 4016.8102 3654.965 3435.0927 2689.8462 3886.5111 3527.1409 3036.1752 4748.9335 4702.2477 2249.9522 3678.4567 212527782 exopolygalacturonase_fungi Fungi function carbon degradation Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 769.4423 635.2218 1125.6487 161786135 gyrB other category gyrB Gluconacetobacter diazotrophicus PAl 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter;species:Gluconacetobacter diazotrophicus; 6090.1902 5093.1356 3881.1902 3126.5101 5153.0854 3800.3425 3138.5779 3211.4689 4626.1343 3204.279 5409.9083 3249.2344 187926849 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 10050.4747 4615.0859 5960.5057 8343.998 5590.3707 6438.3379 8212.4536 7603.4077 6446.7776 7257.1761 5400.2263 5291.5545 170694440 nhh Organic Remediation Aromatics Nitoaromatics Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 1506.1971 1211.3201 1146.4858 1319.9346 1676.5793 1073.6147 1610.6418 954.6156 1098.8616 1111.6982 1384.8863 1149.5349 145635346 gyrB other category gyrB Haemophilus influenzae PittAA superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Haemophilus;species:Haemophilus influenzae; 1042.6149 901.4976 864.2997 1126.0461 1118.3661 948.5876 841.7197 673.1791 837.3488 990.3636 2080.9871 1165.4095 24421491 nirS Nitrogen Denitrification uncultured organism 2049.9432 2071.965 1993.8869 1808.9636 2828.7627 1882.2339 1844.9976 1629.804 1907.2221 2723.966 2579.3608 221133787 pstB Stress Phosphate limitation Glaciecola sp. HTCC2999 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Glaciecola; 474.7108 453.8388 589.8233 895.5537 603.4114 518.1102 698.9975 633.8186 687.094 844.2648 221086024 Catechol Organic Remediation Aromatics Other aromatics Variovorax paradoxus S110 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Variovorax;species:Variovorax paradoxus; 787.2669 655.3241 1180.2185 951.8958 1533.4283 758.8073 861.46 810.3084 755.3403 506.9232 1125.4346 108462780 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 1212.7554 1061.3784 1306.537 1267.2014 858.4777 1366.2047 1454.5328 1157.637 1394.4788 148499066 fnr Stress Oxygen stress Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 2217.5783 462.4285 1377.1365 1642.6072 845.2336 988.3863 1181.8464 820.1976 915.4084 1521.7414 1031.232 1339.0276 255712926 siderophore_transporter Fungi function iron Lachancea thermotolerans superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Lachancea;species:Lachancea thermotolerans; 1757.6698 676.5294 1013.3149 1617.075 1091.1971 1284.4161 1362.9727 1765.5292 1097.7958 1360.7659 1354.2909 1431.9956 218666124 ppk Phosphorus Phosphorus utilization Acidithiobacillus ferrooxidans ATCC 23270 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus;species:Acidithiobacillus ferrooxidans; 2316.2519 2615.1419 3704.6464 2813.2251 3712.1955 2633.0596 1546.7929 2966.2735 2548.5411 2769.0758 2001.888 169846951 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Coprinopsis cinerea okayama7#130 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis;species:Coprinopsis cinerea; 862.4878 1490.0889 1764.2212 1285.1292 1747.3581 1373.1239 705.3039 1685.7564 14306.2956 1386.604 964.9826 167588015 TerD Metal Resistance Tellurium Burkholderia ubonensis Bu superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ubonensis; 2693.9769 2547.8421 2464.9008 2489.5388 3449.2928 3071.2512 2570.6673 2442.7949 3084.3587 3391.8146 2476.0715 2609.4826 146190611 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 9227.5315 8176.0057 6603.6163 6688.5699 10528.5524 6559.4988 8564.0849 5153.0672 5343.1108 6164.9186 7390.3044 4701.7639 164518503 tutFDG Organic Remediation Aromatics BTEX and related aromatics Desulfobacula toluolica superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfobacula; 1290.2997 2768.1677 1385.155 1233.5991 1133.9698 1513.8381 2630.0383 1066.0051 1631.4753 1396.1297 1715.8292 1038.6668 163858787 papC soil_borne_pathogen adherence Bordetella petrii DSM 12804 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella petrii; 890.333 1001.4756 702.9559 915.0257 732.5461 940.2672 887.6322 844.825 2853305 gyrB other category gyrB Vibrio alginolyticus superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 720.7275 1375.9921 1340.2789 1020.5752 1812.1018 1356.0118 1242.3404 1442.5267 1299.9863 1298.4124 1673.7398 221735168 ppk Phosphorus Phosphorus utilization Agrobacterium vitis S4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium vitis; 2206.7653 1193.235 2189.5302 980.4277 766.9891 2351.5622 1924.406 2536.0267 2274.1752 1914.7781 2541.0704 125497588 sigma_70 Stress Sigma factors Streptococcus sanguinis SK36 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus;species:Streptococcus sanguinis; 805.4811 611.3623 1013.6784 685.0543 768.3942 641.1513 811.882 813.2297 552.5531 497.3291 73487245 rubisco Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 939.0036 525.8866 619.7331 1002.5629 1145.3435 697.3369 901.8925 942.399 1011.5463 723.5413 218240354 cda Carbon cycling Carbon degradation Starch Alicyclobacillus acidocaldarius LAA1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Alicyclobacillaceae;genus:Alicyclobacillus;species:Alicyclobacillus acidocaldarius; 1669.2316 1535.2868 1602.135 1683.4806 1979.8116 2032.7689 1024.9451 1385.1161 1335.3642 1432.1418 2972.1077 1645.6297 239798446 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio magneticus; 8022.3724 5316.6655 5845.5856 8434.2783 5695.5962 4711.8588 4397.0085 4531.1497 4882.7915 5330.9859 10050.6688 5089.8813 149202894 pimF Organic Remediation Aromatics Aromatic carboxylic acid Roseovarius sp. TM1035 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 2901.1479 893.508 1591.1431 2284.3088 1881.3358 1330.2122 1460.4123 875.4415 1444.0837 1968.9466 3386.436 1912.6003 83858691 pnbA Organic Remediation Aromatics Nitoaromatics Oceanicaulis alexandrii HTCC2633 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Oceanicaulis; 4090.7121 1335.2669 2250.7124 3840.2655 2328.1362 2430.4416 3307.9104 3328.687 2390.5598 3236.3832 1528.6615 2342.6975 76558196 alkK Organic Remediation Others Natronomonas pharaonis DSM 2160 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Natronomonas;species:Natronomonas pharaonis; 1303.9 1134.801 1671.7791 761.2399 966.2159 1410.4527 1234.1621 1876.3196 1607.926 1552.9181 1368.5659 72162533 gyrB other category gyrB Thermobifida fusca YX superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiopsaceae;genus:Thermobifida;species:Thermobifida fusca; 1062.347 643.1677 636.3351 824.591 507.2236 555.9046 462.3979 514.4047 978.6981 542.4415 78188676 ahpC Stress Oxygen stress Chlorobium chlorochromatii CaD3 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium chlorochromatii; 1515.8213 508.1361 1350.8781 1267.8429 1010.1776 946.9935 717.9528 886.7054 996.1031 1108.0387 1227.466 134075486 cellobiase_fungi Fungi function carbon degradation Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus; 1509.5081 1588.7036 1100.8135 1704.3556 1126.3102 1561.4664 1340.709 822.3764 1445.0506 1461.5877 851.8643 1419.966 83815482 arsM Metal Resistance Arsenic Salinibacter ruber DSM 13855 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Rhodothermaceae;genus:Salinibacter;species:Salinibacter ruber; 1333.6122 3114.0639 2115.6842 1629.1562 1061.8288 2048.3335 2319.108 1732.775 2335.7166 2885.4887 2452.1992 254432815 hrcA Stress Heat shock Cyanobium sp. PCC 7001 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanobium; 1083.3013 1665.6813 1901.0377 690.1635 1668.7179 1416.4011 1911.8698 1858.3199 1217.5227 1371.6144 119775353 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Shewanella amazonensis SB2B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella amazonensis; 4645.3048 9954.9811 6064.7248 4958.6684 12120.0917 7645.5646 4727.3052 4379.8423 6577.4554 6370.6828 4524.8419 5845.3801 67854790 sir Sulphur sulfite reductase Crocosphaera watsonii WH 8501 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Crocosphaera;species:Crocosphaera watsonii; 2387.9804 1821.081 2578.1997 3370.139 1010.9017 1743.5891 2877.9604 2627.9223 1997.4198 2240.7156 1419.0613 1659.4307 161018164 ppx Phosphorus Phosphorus utilization Bartonella tribocorum CIP 105476 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bartonellaceae;genus:Bartonella;species:Bartonella tribocorum; 867.2697 854.1335 959.0681 753.72 992.4748 723.1216 827.4049 693.6474 814.1558 810.5502 1097.7801 781.1372 11078729 gyrB other category gyrB Marinobacterium stanieri superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacterium; 929.5553 1308.3164 852.4646 974.7022 2268.224 1103.8189 15259.8625 844.854 1505.4037 575.6415 805.2326 831.8233 110822175 ureC Nitrogen Ammonification Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 4931.6948 2863.8893 4079.3726 4431.8958 3590.5095 3410.3477 3061.9142 4653.1971 3667.1026 3351.4312 4654.0342 4151.852 196247862 Al Metal Resistance Aluminum Geobacillus sp. G11MC16 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 1423.5817 1522.6589 1352.7683 1252.0017 1520.5737 1712.0363 1398.1921 1387.7306 1623.4191 1130.7445 1674.0103 1433.767 56544415 phzF soil_benifit Zymomonas mobilis subsp. mobilis ZM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Zymomonas;species:Zymomonas mobilis; 1094.2554 2465.6462 3025.6669 1210.142 1345.4445 1844.2898 1436.9615 1773.3506 1973.1784 2420.7076 962.7139 1615.5628 148807326 metC Metal Resistance Mercury Pseudomonas aeruginosa superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 3800.8566 1007.1333 3226.0647 3450.5846 1621.3057 1743.604 1921.2058 4007.3857 1541.9581 2073.2412 3579.5938 2220.6444 114537112 nifH Nitrogen Nitrogen fixation Fulvimarina pelagi HTCC2506 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Fulvimarina;species:Fulvimarina pelagi; 2359.5711 5889.8894 3105.3579 2200.6717 4138.4685 4120.233 3894.1882 2412.2484 4162.596 4155.583 1780.5835 4171.9973 117996273 GcdB Organic Remediation Aromatics Aromatic carboxylic acid Chloroflexus aggregans DSM 9485 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aggregans; 4880.9879 3951.3899 4089.0849 4456.5856 5205.7007 4324.6256 3427.5105 5010.491 3422.4691 3928.5133 7476.9051 4582.9791 237685247 ureC Nitrogen Ammonification Teredinibacter turnerae T7901 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;genus:Teredinibacter;species:Teredinibacter turnerae; 2402.9037 1755.3762 2382.2802 2829.0868 1215.2433 1246.6188 2181.4804 1791.1055 1614.5011 1439.5862 2408.8325 270288710 pmoA Carbon cycling Methane Methane oxidation Methylothermus sp. HTM55 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae;genus:Methylothermus; 2050.9372 2724.0525 2629.7131 1993.5789 632.2804 3411.8733 3927.7501 2756.276 2325.6868 2305.0232 1157.7937 1196.6231 312960076 phzF soil_benifit Pseudomonas fluorescens WH6 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 1849.3184 2228.0868 3167.3252 1608.8565 2993.1122 2022.4649 2802.1875 2872.022 2418.0835 1261.2917 1979.9849 247544253 glnR Stress Nitrogen limitation Paenibacillus sp. JDR-2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 510.8601 663.696 838.5093 600.7417 896.3973 554.7883 119950693 pcaG Organic Remediation Aromatics Other aromatics Arthrobacter aurescens TC1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter aurescens; 1029.1826 505.9189 1073.4065 609.3784 961.0462 1101.9104 936.3865 600.8521 674.4201 804.1756 598.8952 213965471 pimF Organic Remediation Aromatics Aromatic carboxylic acid Corynebacterium amycolatum SK46 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium amycolatum; 1151.6046 501.4833 1803.4778 1459.5809 622.0723 904.4389 1161.2234 944.1346 953.5701 997.2132 1237.5181 124485383 rubisco Carbon cycling Carbon fixation Methanocorpusculum labreanum Z superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanomicrobiales;family:Methanocorpusculaceae;genus:Methanocorpusculum;species:Methanocorpusculum labreanum; 2300.8988 1374.8707 1673.742 2087.4754 1175.7756 18083.8941 2418.2681 2425.0789 1410.3717 2163.7006 1453.6327 1290.6348 121530811 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 556.463 1158.7697 804.8187 842.0142 813.8464 1092.5507 737.2029 898.553 475.7831 84501659 FTHFS Carbon cycling Acetogenesis Oceanicola batsensis HTCC2597 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola batsensis; 1846.3902 1292.8469 1866.2157 1780.2536 1793.5721 1559.6567 1356.6182 1095.5456 855.1484 1408.6588 2316.6685 1625.4844 6561867 amyA Carbon cycling Carbon degradation Starch Emericella nidulans superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella; 2781.8959 4817.0427 3945.3766 2957.5011 6944.8779 3478.5484 3751.7968 3677.2417 3599.3466 4412.1769 2022.5353 2347.8059 228878182 AceB Carbon cycling Carbon degradation Others Nakamurella multipartita DSM 44233 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nakamurellaceae;genus:Nakamurella;species:Nakamurella multipartita; 9275.2028 12420.4235 10714.6849 11044.8759 7911.435 10892.6794 9148.0419 7801.0342 11419.4174 13371.8122 9393.644 11725.9014 169243418 akbF Organic Remediation Aromatics BTEX and related aromatics Mycobacterium abscessus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 956.1579 1155.2337 1002.7011 903.5572 2027.2673 901.4379 1368.6964 1276.0203 1086.275 1426.0282 998.6067 1157.1426 2264396 phenol_oxidase Carbon cycling Carbon degradation Lignin basidiomycete CECT 20197 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Trametes; 704.43 1228.0383 914.0132 636.8801 1382.1312 867.0609 869.8447 877.245 858.3635 903.9464 986.3946 227111749 nrfA Nitrogen Dissimilatory N reduction Pectobacterium carotovorum subsp. brasiliensis PBR1692 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium carotovorum; 5018.7092 6003.6422 7272.2727 7521.8177 3234.2882 8283.2708 7828.3157 4109.4126 6933.9478 6363.7261 4392.6104 3572.0448 117648035 groEL Stress Heat shock Acidothermus cellulolyticus 11B superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Acidothermaceae;genus:Acidothermus;species:Acidothermus cellulolyticus; 2311.2417 2125.9934 2700.2151 2239.7645 2948.7955 2314.9193 2245.6985 3497.0454 1959.5841 2401.9368 3298.7462 2406.0997 121609742 tomA Organic Remediation Aromatics BTEX and related aromatics Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 5411.4696 4515.4901 6826.7247 5499.9672 3187.9132 3936.5847 3120.074 5224.3493 4656.5342 4293.1202 5516.6736 4451.1897 77383191 catB Organic Remediation Aromatics BTEX and related aromatics Pseudomonas fluorescens Pf0-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 2076.9824 3155.9741 2869.542 2002.4686 1775.4468 3470.801 2476.8465 2973.1483 3333.646 2909.3179 1695.8727 2709.8181 152983498 cytochrome Energy process Energy process Pseudomonas aeruginosa PA7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 3926.7306 2599.7871 2596.4759 3015.2772 4192.5221 2909.0578 2260.8622 2945.8773 2874.0139 2864.5628 3753.1476 3098.7731 229611246 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 3083.7331 3211.1622 17031.0662 3378.6041 4451.9454 3186.1978 2370.4372 3589.8973 2064.7041 2595.1275 5800.3081 3599.4957 220933747 sigma_24 Stress Sigma factors Thioalkalivibrio sp. HL-EbGR7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Thioalkalivibrio; 7622.7078 11215.2453 11390.2912 5886.5387 5850.8937 11047.477 8675.6902 10281.8048 12939.1492 11981.6562 3646.142 11798.518 38427022 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1443.9854 839.0718 1547.6265 1195.0269 1165.7365 423.8731 869.9479 683.3951 619.5837 786.8885 1004.8771 847.2035 156055248 AceA Carbon cycling Carbon degradation Others Sclerotinia sclerotiorum 1980 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Sclerotinia;species:Sclerotinia sclerotiorum; 837.9201 723.9555 1231.7271 802.8599 521.1967 683.6519 820.6642 715.1083 718.3744 563.152 612.5312 612.6138 227844366 amyA Carbon cycling Carbon degradation Starch Mobiluncus mulieris ATCC 35243 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Mobiluncus;species:Mobiluncus mulieris; 497.6292 1385.6509 1000.1276 700.2175 1400.5219 990.5549 836.2828 899.5532 1141.3744 868.9173 1097.4344 302885782 pec_CDeg Fungi function carbon degradation Nectria haematococca mpVI 77-13-4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Nectria;species:Nectria haematococca; 1163.6668 2664.1752 2309.5973 1254.8576 1100.9404 2022.2397 2630.2723 2069.8669 2989.9907 2979.4879 2417.4014 23014368 aclB Carbon cycling Carbon fixation Magnetospirillum magnetotacticum MS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magnetotacticum; 1616.4292 1754.2358 1867.6042 1634.8338 2236.5806 1796.8933 1700.6964 1030.3277 1531.5847 1379.7768 1520.6973 1795.6488 188989868 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Xanthomonas campestris pv. campestris str. B100 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas campestris; 588.0828 911.1868 597.216 430.9861 528.6756 759.1629 68203850 pcc Carbon cycling Carbon fixation Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 2527.4882 2231.4253 3229.4669 3144.4449 2151.111 3373.8245 3158.2125 3113.6546 2383.1976 3528.7022 3010.5711 2444.1795 262086588 sigma_24 Stress Sigma factors Gordonia bronchialis DSM 43247 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Gordoniaceae;genus:Gordonia;species:Gordonia bronchialis; 2790.506 1635.2394 1874.2342 2630.774 2839.1905 1847.1016 1792.9801 2043.7036 2048.9081 2276.2975 2961.3684 1702.873 114552723 ZntA Metal Resistance Zinc Mariprofundus ferrooxydans PV-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Zetaproteobacteria;order:Mariprofundales;family:Mariprofundaceae;genus:Mariprofundus;species:Mariprofundus ferrooxydans; 771.8467 676.1472 752.1712 880.1468 907.8379 612.9341 674.2888 576.1302 823.7196 943.6863 19918691 mcrA Carbon cycling Methane Methane production Methanosarcina acetivorans C2A superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanosarcinales;family:Methanosarcinaceae;genus:Methanosarcina;species:Methanosarcina acetivorans; 547.4767 826.1636 596.6917 741.814 580.2425 529.1048 507.4705 640.0874 146405702 exaA Organic Remediation Chlorinated solvents Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 3060.8982 1543.9262 2257.2697 3185.6334 1505.4377 1873.7686 1707.6875 1234.9747 2257.2144 2370.2352 3404.7188 1988.0458 240170468 sigma_24 Stress Sigma factors Mycobacterium kansasii ATCC 12478 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium kansasii; 2871.0192 2642.3982 3536.2501 1623.9786 1430.1178 3081.5038 2368.8658 1626.9564 1937.3755 2629.911 1092.8071 1744.9156 206678232 sigma_70 Stress Sigma factors Rhodobacterales bacterium HTCC2083 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales; 1086.0281 838.9061 1016.5718 918.3232 906.645 667.9927 549.9515 1910.7199 962.4468 781.9306 34646.582 1009.7533 221069682 tfdA Organic Remediation Aromatics Chlorinated aromatics Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 1303.497 1973.0445 2267.3601 1309.8395 935.8221 2133.3799 2428.3619 1854.314 2429.141 2408.1453 1194.5032 2180.7244 223891548 sigma_24 Stress Sigma factors bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3; 939.8175 949.983 907.0603 806.4144 1553.241 832.3772 904.9321 865.7218 784.8937 685.1957 1470.4979 1177.5626 260063925 dsrA Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 615.0281 944.5026 922.5786 668.9666 696.4595 849.9064 837.6029 829.9419 256686001 narI Stress Oxygen limitation Jonesia denitrificans DSM 20603 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Jonesiaceae;genus:Jonesia;species:Jonesia denitrificans; 1777.2138 1611.5595 1847.8814 1724.0801 1922.0229 1438.5107 1307.4912 1650.696 1641.7778 1322.1635 2994.4986 1790.7806 260576520 sigma_70 Stress Sigma factors Rhodobacter sp. SW2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter; 5887.0938 2395.766 2353.3466 4702.3877 2358.2629 3034.556 3380.7808 4457.7494 2416.5718 3323.1131 2862.003 3126.0593 218888253 CopA Metal Resistance Copper Desulfovibrio vulgaris str. 'Miyazaki F' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 4964.1406 4761.5553 4966.9427 5328.5016 4716.2887 5644.862 4261.8893 4459.0627 5291.1585 5809.1332 5552.9388 5239.0008 116804622 nasA Nitrogen Assimilatory N reduction uncultured prokaryote 3424.403 2706.2639 3026.2921 3658.1295 4622.7329 3120.2705 2561.3592 2044.8958 3683.4636 3405.5438 3466.2698 3113.8787 78224388 obgE Stress Radiation stress Geobacter metallireducens GS-15 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter metallireducens; 2295.7609 2871.0379 2804.7341 2383.7186 3223.2633 2322.8087 1942.5003 2709.3022 2125.2902 2372.9878 4000.6851 2879.0665 146410979 Catechol Organic Remediation Aromatics Other aromatics Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 5845.2791 3164.6646 2293.9528 4648.5016 3022.1121 4122.3119 3365.7548 3907.6707 4305.1906 4957.3229 3247.79 4198.8716 90436739 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Flavobacterium johnsoniae UW101 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Flavobacterium;species:Flavobacterium johnsoniae; 592.4449 499.1131 648.714 619.8052 627.9818 558.691 673.9287 220708117 xylG Organic Remediation Aromatics Aromatic carboxylic acid Geobacillus sp. Y412MC61 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 1811.8625 2695.8596 1840.539 1684.6723 3711.5945 2652.7444 2266.8957 1977.0393 2097.921 2002.8647 1740.6306 1744.9146 228848109 fnr Stress Oxygen stress Bacillus thuringiensis IBL 200 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus thuringiensis; 1186.5285 1122.1094 1144.1412 1190.7943 1664.4197 1142.1585 904.2463 932.7846 987.5968 1165.3753 2227.6333 1254.2303 209486129 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 4806.1163 2761.5283 3326.0236 3738.5066 4717.5306 3401.2693 2747.1883 3500.4225 2490.4378 2840.5438 5292.2598 3828.7161 149950542 nrfA Nitrogen Dissimilatory N reduction Alkaliphilus metalliredigens QYMF superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Alkaliphilus;species:Alkaliphilus metalliredigens; 946.8829 663.3519 617.4483 694.3001 1128.6991 520.3853 533.6638 910.6286 662.7546 628.8274 598.9814 659.908 48728356 B_lactamase_C Antibiotic resistance Beta-lactamases Laribacter hongkongensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Laribacter; 1401.217 962.8912 1627.7245 1399.6953 1233.9685 606.8897 891.5765 1114.046 943.0513 1141.117 18034205 APS_AprA Sulphur adenylylsulfate reductase Desulfococcus multivorans superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfococcus; 413.0187 1310.6865 732.9064 582.1302 1144.3407 714.417 779.2299 613.6537 719.6247 1038.4128 965.9059 73534215 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 1126.5668 1252.058 846.896 1664.5095 867.9865 1244.0491 1877.0913 585.5442 1321.1758 1137.7942 871.4444 1189.5784 225018167 sigma_70 Stress Sigma factors Clostridium methylpentosum DSM 5476 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium methylpentosum; 1379.5372 2707.7675 2396.3544 1498.7284 1597.7769 1768.596 2211.9875 2439.253 2200.9617 2534.1699 1774.4812 2656.5366 160899137 nagI Organic Remediation Aromatics Aromatic carboxylic acid Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 8087.2907 6576.6749 8796.1852 8515.3814 2346.4091 5360.4962 7617.1144 5243.4861 4553.3869 4197.1101 6890.953 6271.8382 121707620 glucoamylase_fungi Fungi function carbon degradation Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 13929.8427 2861.7613 3654.0926 2723.6706 2778.7664 2947.7946 3059.385 4642.8479 2833.0912 2667.5755 2799.4429 3853.3382 229747887 B_lactamase_C Antibiotic resistance Beta-lactamases Stackebrandtia nassauensis DSM 44728 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Glycomycetaceae;genus:Stackebrandtia;species:Stackebrandtia nassauensis; 2880.4353 3893.0418 3061.5359 3658.4308 4180.4449 3852.3808 3272.628 2486.1207 3894.7869 3756.0363 3248.4627 3007.1921 121554264 nahA Organic Remediation Aromatics Polycyclic aromatics Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 946.4934 581.1303 717.1301 1581.2053 545.8342 787.6702 1015.4959 68135545 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 547.346 576.9638 437.5236 685.6228 718.6991 651.4211 558.537 507.7681 512.8968 576.1274 647.9059 28810059 iro virulence Iron oxidation Vibrio parahaemolyticus RIMD 2210633 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio parahaemolyticus; 1176.132 826.7242 817.9915 1064.2292 1086.8743 667.9478 559.8503 779.1278 587.0598 839.3262 1296.7039 628.049 209531090 cat_bac soil_benifit Gluconacetobacter diazotrophicus PAl 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter;species:Gluconacetobacter diazotrophicus; 1938.7977 1790.0531 1506.1356 1354.6898 3804.0602 2013.9315 1788.8967 2065.3762 1494.8148 1667.2253 1431.0255 1555.5592 133738533 ArsA Metal Resistance Arsenic Herminiimonas arsenicoxydans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Herminiimonas; 1223.2122 2136.6844 2091.5777 1268.8086 800.9266 2179.4602 1339.4795 1409.5019 1237.6318 1357.4101 1187.4561 2171.9906 71735171 TerZ Metal Resistance Tellurium Pseudomonas syringae pv. phaseolicola 1448A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas savastanoi; 2575.0923 2864.8705 1870.1413 1989.8942 3512.3929 3172.4231 2254.0603 1615.0852 3372.4137 3235.8696 1756.6008 260948968 chitin_synthase Fungi function major biomolecule Clavispora lusitaniae ATCC 42720 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Metschnikowiaceae;genus:Clavispora;species:Clavispora lusitaniae; 7243.1648 4137.4907 5623.1024 6189.8567 4057.5871 3565.5641 3606.6525 3631.6207 3931.6908 5080.9467 5718.9608 5368.9775 241215473 phoB Stress Phosphate limitation Asticcacaulis excentricus CB 48 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Asticcacaulis;species:Asticcacaulis excentricus; 2106.1439 1554.8721 1652.209 2448.7339 827.3752 1496.1223 1137.9039 1337.4092 1216.4984 1160.5738 1412.3584 1297.3911 302885356 pec_CDeg Fungi function carbon degradation Nectria haematococca mpVI 77-13-4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Nectria;species:Nectria haematococca; 1117.9835 581.2134 710.7191 736.242 931.1028 539.1553 639.534 1139.7504 1301.1978 727.0587 709.111 145304829 linB Organic Remediation Pesticides related compound Salinispora tropica CNB-440 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora tropica; 4659.8654 2786.1087 3114.9539 3801.0221 3118.8436 2594.7813 2012.5891 2023.4833 2702.6348 2342.1851 4403.5897 2782.9291 258594430 pstB Stress Phosphate limitation Desulfurivibrio alkaliphilus AHT2 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobulbaceae;genus:Desulfurivibrio;species:Desulfurivibrio alkaliphilus; 2412.36 746.4716 1538.1903 1836.6052 1145.6299 896.8538 1265.4643 1305.3611 1124.0758 1666.1013 1954.0892 1039.9096 124261494 CopA Metal Resistance Copper Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 10017.0551 6793.2473 4572.232 9748.4326 8581.8821 5734.8989 8030.2834 4484.3546 5524.2984 6540.6362 7491.544 5516.2295 157837319 Pg_Oomycetes soil_borne_pathogen oomycete carbon degradation Phytophthora parasitica superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 893.2881 1105.3766 664.4015 110633818 sigma_70 Stress Sigma factors Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 1775.8437 2984.1663 2438.7515 1968.8274 1386.3971 2800.4153 2511.9799 1971.9918 2827.1153 3018.6151 1377.3786 3160.3078 259169678 Tet Antibiotic resistance other Lactobacillus antri DSM 16041 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus antri; 1300.1792 1453.3521 1485.95 1520.6992 2351.9114 1545.8969 1334.3889 977.541 1172.745 1528.017 1945.4643 1107.9121 126179296 CadA Metal Resistance Cadmium Methanoculleus marisnigri JR1 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanomicrobiales;family:Methanomicrobiaceae;genus:Methanoculleus;species:Methanoculleus marisnigri; 930.1194 777.3596 1257.3456 1055.3806 1105.6443 951.7284 684.2794 782.9426 698.573 811.3654 966.1735 1046.9131 146324229 tre_fun soil_benifit Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 653.3104 717.889 413.2702 16611903 rubisco Carbon cycling Carbon fixation Nitrosospira sp. 40KI superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosospira; 1188.718 1851.4296 1670.6305 1543.2042 2552.8256 1429.1331 1189.9902 1176.5176 2491.3231 1348.2036 1176.8931 2691.3206 81159429 INF1_elicitin_Oomycetes soil_borne_pathogen oomycete elicitor Phytophthora ramorum superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 497.3068 860.7029 505.1504 1790867 vanA Carbon cycling Carbon degradation Others Comamonas testosteroni superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas; 3410.7289 4585.9692 5295.8186 6526.0351 2333.5144 6359.4136 4148.4258 4620.7576 4858.8296 4930.0656 4066.4284 4248.6101 220723632 endoglucanase Carbon cycling Carbon degradation Cellulose Postia placenta Mad-698-R superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Postia;species:Postia placenta; 1415.3612 1836.6864 1676.1264 1312.7845 978.6343 2020.2505 1317.6539 1640.9036 2330.4047 1760.7704 1173.5058 1493.7087 146194468 perR Stress Oxygen stress Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2431.2995 1461.947 999.3861 1404.7065 1556.9002 997.3078 1189.3938 1031.4655 1115.1119 1435.0061 911.013 1402.1071 186909421 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria; 1663.3617 796.6518 2178.7274 1823.5515 893.0146 2210.9906 1320.2788 893.45 1120.3153 1325.8857 146281451 cytochrome Energy process Energy process Pseudomonas stutzeri A1501 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas stutzeri; 7619.9945 3763.1442 4262.9772 5108.0399 7230.9773 4355.3009 3868.1163 4419.1489 4390.9151 4495.3334 8478.3066 5150.4958 116688011 mcrA Carbon cycling Methane Methane production Methanosarcinaceae archaeon ZC-1 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanosarcinales;family:Methermicoccaceae;genus:Methermicoccus; 543.5276 498.5652 790.0611 416.7055 1079.8783 1096.6914 661.2564 398.1024 536.3468 1186.6122 157679004 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 3006.0138 4202.2271 4358.109 2466.212 3584.0158 4788.3902 3751.3724 6582.9207 4427.2249 4854.8819 2369.0661 5022.8811 227286983 cat_fun soil_benifit Paracoccidioides brasiliensis superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Paracoccidioides; 658.0117 386.1514 780.0023 569.9841 774.0967 421.1314 670.4407 163863401 gyrB other category gyrB Bacillus weihenstephanensis KBAB4 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus weihenstephanensis; 1706.3316 1819.3438 1693.7338 1417.7668 1894.5506 1970.1918 1569.6204 2793.2909 1574.61 1399.1115 2298.4578 1535.7709 118655571 CadA Metal Resistance Cadmium Burkholderia multivorans ATCC 17616 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 2083.0001 1298.2115 2131.7503 1671.3857 2158.3346 1608.8404 1364.0051 902.318 1437.1759 1810.623 1444.2311 16126640 pimF Organic Remediation Aromatics Aromatic carboxylic acid Caulobacter crescentus CB15 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter;species:Caulobacter vibrioides; 795.1248 1522.7354 982.4621 780.8274 683.9261 1028.1401 1034.3507 1353.9718 916.3985 1588.7624 1046.5286 76803782 alkB Organic Remediation Other Hydrocarbons Pseudomonas sp. PT10 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1774.2184 1739.7411 1227.0453 1438.4867 1136.6052 1330.2721 727.9599 1484.4559 1388.6115 883.791 1304.7379 84686266 proV Stress Osmotic stress Rhodobacterales bacterium HTCC2654 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales; 6912.596 7290.4873 7061.5228 11332.6198 5193.6993 7658.6962 5380.8558 9418.3708 6143.1015 6441.3106 6993.6582 9333.8224 254517437 ctsR Stress Protein stress Clostridium sp. 7_2_43FAA superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium; 1433.4679 1334.7954 1176.826 1269.7058 1522.0499 1578.2324 1334.6986 1258.5902 1253.7983 1248.7217 2457.741 1547.8691 151302283 APS_AprB Sulphur adenylylsulfate reductase Desulfobacterium corrodens superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfobacterium; 324.7814 461.2764 412.7342 748.3443 116254540 proX Stress Osmotic stress Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1669.1241 664.5115 630.6211 1267.7744 542.7537 970.678 1338.3576 1424.6971 886.752 1085.0662 813.93 222353995 APS_AprA Sulphur adenylylsulfate reductase uncultured bacterium superkingdom:Bacteria; 1237.8131 965.6308 740.7286 1166.1662 1281.709 1612.6681 1360.7381 810.0903 1189.9862 835.8743 115365673 atzA Organic Remediation Herbicides related compound Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 893.0731 1813.0745 2154.6645 1349.85 3385.9835 1721.9922 1839.0445 1871.2721 1858.8674 2105.3336 820.0077 2274.997 50470529 ZitB Metal Resistance Zinc Arabidopsis lyrata subsp. lyrata superkingdom:Eukaryota;kingdom:Viridiplantae;phylum:Streptophyta;order:Brassicales;family:Brassicaceae;genus:Arabidopsis;species:Arabidopsis lyrata; 366.3277 531.4828 490.4211 406.8962 364.1825 15158561 oxyR Stress Oxygen stress Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 5883.3462 5528.7654 7731.2551 6924.7015 3205.2422 7846.278 7078.6101 5313.6667 6407.4741 7188.0222 5911.8062 6764.5549 170941809 protease_aspartate_fungi Fungi function carbon degradation Podospora anserina S mat+ superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Lasiosphaeriaceae;genus:Podospora;species:Podospora anserina; 4422.1809 2066.1629 3694.7886 3617.4889 3090.7077 2684.4742 2274.6264 2258.0036 2432.3911 2462.3585 5078.5129 2556.002 49610577 pstS Stress Phosphate limitation Pectobacterium atrosepticum SCRI1043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium atrosepticum; 4719.666 9796.2853 6916.3606 5535.5122 12071.688 7161.2052 8277.1571 6161.0263 8486.5414 5205.5643 8746.3251 5253.049 40746284 phospholipase_C_fungi Fungi function carbon degradation Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 732.2214 2340.1193 1882.18 700.6558 1923.4449 23777.5418 1436.3822 2282.2122 1118.5775 1782.7795 1451.1821 1862.6695 296852109 sir Sulphur sulfite reductase Meiothermus silvanus DSM 9946 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Meiothermus;species:Meiothermus silvanus; 907.083 436.0004 823.6764 732.845 547.2017 776.1674 563.5386 675.848 826.7528 727.537 793.565 302189595 impH soil_borne_pathogen secretion system type IV Pseudomonas syringae pv. syringae 642 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae; 714.4639 1217.411 638.7146 1004.8347 1115.1558 2311.8817 15519.6191 1100.5216 1048.3063 1139.5103 157285724 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 906.0085 448.8576 639.5047 996.0292 942.5004 993.597 757.8848 396.2258 929.2161 499.9261 84516744 pimF Organic Remediation Aromatics Aromatic carboxylic acid Loktanella vestfoldensis SKA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Loktanella;species:Loktanella vestfoldensis; 3816.0888 19780.5981 3874.2349 3868.2358 3002.0529 4918.3753 4335.4019 4586.0426 5345.0213 6757.8906 1973.5731 4963.3377 162568547 aoxB Metal Resistance Arsenic uncultured bacterium superkingdom:Bacteria; 1051.4668 1980.9449 920.7129 1228.1749 1479.9245 1241.671 1617.0956 700.5871 1191.9017 1321.0021 996.6846 971.852 149920026 vanA Carbon cycling Carbon degradation Others Plesiocystis pacifica SIR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Nannocystaceae;genus:Plesiocystis;species:Plesiocystis pacifica; 6244.0706 3857.2989 3550.7023 6168.7077 4321.2763 3260.4708 3789.075 2657.4688 3340.449 3555.2189 4497.9103 3945.2488 77458497 tfdA Organic Remediation Aromatics Chlorinated aromatics Pseudomonas fluorescens PfO-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 1388.5234 1467.5219 1664.015 1233.3251 1549.9052 1426.3916 1398.5276 1841.2425 1532.1485 1261.0034 521.8567 205323494 cda Carbon cycling Carbon degradation Starch Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 1509.2126 365.3045 886.7196 1743.3114 717.7954 504.8329 786.319 1098.4529 789.7886 82791407 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 1530.0327 2460.8805 2536.2824 1969.6493 1208.405 1741.8542 1933.9033 2114.3138 1954.2256 2280.1332 2674.7868 254469746 sigma_24 Stress Sigma factors Pseudovibrio sp. JE062 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pseudovibrio; 937.8833 904.6705 919.1136 1024.3694 1086.6279 1088.5934 628.2473 836.9994 684.7267 1429.1997 1080.5024 150837673 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Marinomonas sp. MWYL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Oceanospirillaceae;genus:Marinomonas; 798.4875 849.4697 582.8425 975.7146 1092.2128 1073.7968 921.9945 1013.3759 874.2437 866.6731 113733168 pcc Carbon cycling Carbon fixation Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 4416.4588 1571.1061 3208.6318 4530.9906 2941.2686 2198.5145 2069.7108 1616.1383 2897.4632 3179.6018 4428.287 2696.9097 70732857 katA Stress Oxygen stress Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 18770.6952 18051.3693 26986.6907 19121.1832 10991.1462 20485.7023 24628.9493 26033.8855 21377.6911 17620.7635 22309.6072 22039.8426 85667045 pulA Carbon cycling Carbon degradation Starch Bifidobacterium adolescentis superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium; 990.4842 733.5507 769.1242 1088.5423 579.82 434.0737 588.116 754.0332 209909111 dmsA Organic Remediation Others Enterobacter cancerogenus ATCC 35316 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter;species:Enterobacter cancerogenus; 1562.3642 554.277 1005.0274 1516.3708 683.7176 836.6486 1531.4245 1734.627 999.9796 1294.1357 814.3008 223017319 ureC Nitrogen Ammonification Actinobacillus minor 202 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Actinobacillus;species:Actinobacillus minor; 1259.4391 1309.0045 718.236 1319.2908 1375.4574 1159.6806 2382.5269 802.5012 1045.5037 953.4361 1054.8002 666.4309 146304352 universal_stress_Family_protein_III Bioleaching other category Metallosphaera sedula DSM 5348 787.0923 1648.7337 1440.9939 1339.2481 1430.478 1874.5164 1474.2684 1877.3848 1489.1884 1826.8535 1503.6759 1956.6537 69154804 pcaG Organic Remediation Aromatics Other aromatics Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 9191.3718 9694.4341 7776.4875 11490.8262 8775.1556 9518.0021 7188.2081 7168.598 7113.4579 7646.874 8752.6676 7399.5936 24350146 sigma_24 Stress Sigma factors Shewanella oneidensis MR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella oneidensis; 561.5136 463.1126 523.541 522.5721 557.3291 480.1238 114544475 fnr Stress Oxygen stress Roseovarius sp. HTCC2601 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pelagibaca;species:Pelagibaca bermudensis; 4633.5918 5811.9559 5295.2516 5304.887 4439.8493 5807.8706 4786.3654 4532.1059 6290.81 6276.6613 4923.7704 6232.8933 84712744 proO Organic Remediation Aromatics Other aromatics Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 3078.6019 3870.6913 4769.4747 3046.2063 2887.5183 4528.9135 3283.995 4350.4813 4202.9479 3873.1054 2536.5417 4732.5106 255956199 glx Carbon cycling Carbon degradation Lignin Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 1820.8419 884.6646 1097.9202 1937.3642 857.3123 948.9316 815.3611 858.7134 822.0654 1390.4798 16582.9649 1623.6442 218274293 ara Carbon cycling Carbon degradation Hemicellulose Roseburia intestinalis L1-82 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Roseburia;species:Roseburia intestinalis; 833.9845 402.8569 460.5833 497.2886 312.6333 726.2806 356.27 496.974 880.5498 480.6718 254818537 CDH Carbon cycling Carbon degradation Cellulose Mycobacterium intracellulare ATCC 13950 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium intracellulare; 878.2573 969.0204 1050.3761 836.9997 803.6364 926.8262 844.9773 789.0291 687.2969 660.2385 1206.5156 886.5986 120326584 chnB Organic Remediation Other Hydrocarbons Marinobacter aquaeolei VT8 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter hydrocarbonoclasticus; 470.6677 879.9626 755.2536 751.1586 722.2066 809.0454 742.009 488.8337 878.0968 724.0324 822.9247 121701467 chitin_synthase Fungi function major biomolecule Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 5615.2913 1547.8509 3347.4548 4156.5413 2526.2254 2247.0177 3101.951 3433.5948 2323.8463 2993.7028 6266.6496 2281.3825 219867666 nrfA Nitrogen Dissimilatory N reduction Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio desulfuricans; 2202.6012 1323.8496 1702.472 2462.9246 1330.0493 2259.7306 2095.4385 1989.5793 1568.9137 2262.345 1211.1283 1415.558 123987382 obgE Stress Radiation stress Microscilla marina ATCC 23134 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Microscilla;species:Microscilla marina; 5214.3909 4188.9621 4799.5278 6952.0144 3281.9525 5058.0371 3881.5365 3635.2035 5971.1982 5490.2976 5420.6232 4675.4939 39934830 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 2845.6456 2127.1148 2201.7288 3839.0601 1881.7149 2610.5154 2980.5387 3215.2095 2021.5448 2852.2984 1792.1874 1834.0513 126355143 ArsC Metal Resistance Arsenic Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 2884.8545 3063.2593 2725.572 2928.6815 2384.2754 3731.4144 3968.9626 2635.1243 2945.5267 3080.7006 4627.6672 2460.7133 238885302 sped_bac soil_benifit Selenomonas flueggei ATCC 43531 superkingdom:Bacteria;phylum:Firmicutes;class:Negativicutes;order:Selenomonadales;family:Veillonellaceae;genus:Selenomonas;species:Selenomonas flueggei; 2010.8686 1687.5985 1398.1896 2124.1437 1444.4512 1861.9083 1273.7 1168.0744 1491.4017 1429.4842 1402.7966 1538.2428 83771612 nitA Organic Remediation Aromatics Other aromatics Aspergillus oryzae superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus; 1875.2696 3957.7711 2742.2068 2226.0294 2192.3859 3882.5043 3234.9912 2960.6427 4427.8933 3072.3977 2098.4169 3794.0567 157083036 dmsA Organic Remediation Others Citrobacter koseri ATCC BAA-895 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter;species:Citrobacter koseri; 646.7785 998.0606 500.1944 641.851 1147.0251 569.1321 698.9192 1042.5324 149120187 sox Sulphur Sulphur oxidation Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 1423.1788 1119.9814 583.7458 1622.0472 1388.0086 1111.7757 808.4675 845.9918 14562.9914 830.8843 1096.579 843.0563 78515503 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 4637.9573 3085.2785 5187.7175 2491.7989 1928.8863 4251.265 3574.8456 4914.5525 3715.3933 4002.6362 1603.6423 5021.0135 157804864 AprA Sulphur adenylylsulfate reductase sulfur-oxidizing bacterium AII2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 2044.1001 1341.8548 1318.3824 1807.1419 4068.868 1218.3093 3149.8163 1398.6366 1762.3326 1570.2596 1563.4251 1290.6348 11078891 gyrB other category gyrB Pseudomonas mendocina superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1631.9973 594.0084 1127.2754 1488.0443 1310.7485 693.4932 950.6295 1209.2773 635.6475 938.9532 1673.3136 1289.907 91690603 phn Organic Remediation Herbicides related compound Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 3482.2425 2657.2815 3055.4584 3151.2252 2857.0314 2993.845 2746.4198 2680.1401 2631.4015 3073.5206 4156.1123 3356.2409 84511701 gyrB other category gyrB Loktanella vestfoldensis SKA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Loktanella;species:Loktanella vestfoldensis; 935.1834 539.8001 1195.6401 1142.4558 837.9111 560.3321 727.6726 520.24 679.6795 517.9825 89898407 amyA Carbon cycling Carbon degradation Starch Chlamydophila felis Fe/C-56 superkingdom:Bacteria;phylum:Chlamydiae;class:Chlamydiae;order:Chlamydiales;family:Chlamydiaceae;genus:Chlamydophila;species:Chlamydophila felis; 557.897 537.6466 584.7054 677.3426 685.405 479.6746 370.6499 391.1859 507.4859 571.1081 791.995 148518215 PobA Organic Remediation Aromatics Aromatic carboxylic acid Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 3758.2307 5887.5084 5321.8398 4522.4982 3060.9074 6364.2353 4696.1529 5507.4684 6844.3474 5921.5836 4568.7348 6082.5586 146406798 nahA Organic Remediation Aromatics Polycyclic aromatics Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1672.1598 921.5119 778.3277 1291.6994 1019.3689 867.7489 1165.7575 1172.5167 893.9316 937.7808 1676.4609 1171.6715 90411472 SMR_antibiotics Antibiotic resistance transporter Photobacterium profundum 3TCK superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Photobacterium;species:Photobacterium profundum; 2519.5497 4894.7978 2690.3428 3128.7612 2637.6696 4042.6098 6007.1073 2572.7752 4877.2932 2381.424 3272.0549 2407.1708 220710253 ArsC Metal Resistance Arsenic Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 1056.5576 1284.2202 2019.6799 725.7086 803.581 1483.2151 1124.002 1799.2396 1610.2558 1650.8814 1981.0973 17129953 nirA Nitrogen Assimilatory N reduction Nostoc sp. PCC 7120 superkingdom:Bacteria;phylum:Cyanobacteria;order:Nostocales;family:Nostocaceae;genus:Nostoc; 1055.8054 1806.4993 1763.1598 1323.5233 1709.0125 1680.997 1388.0352 1487.9419 2037.2941 1524.4884 1532.2652 1546.6332 222080795 Tet Antibiotic resistance other Agrobacterium radiobacter K84 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 1729.3142 2594.9959 2604.24 2300.965 1781.7224 2783.2455 2784.1684 2204.8174 2759.3068 1923.9793 2264.7753 1812.2031 63029775 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1107.4257 489.7346 560.877 888.6269 515.7174 396.2191 870.9803 610.6848 368.2218 549.4228 1260.5197 169761882 katE Stress Oxygen stress Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 636.1939 1064.4366 1075.0496 986.2492 1077.66 1349.3712 997.3707 652.1661 838.9738 1015.0191 1152.556 77378612 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 713.7788 1949.458 1093.4711 789.539 2748.0899 1218.9973 1232.6136 1647.1131 1211.4661 1542.3435 1422.7262 50121017 hrpY2 soil_borne_pathogen secretion system type III Pectobacterium atrosepticum SCRI1043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium atrosepticum; 2001.9227 2867.5337 2376.3335 2259.982 3414.0057 1783.9411 2238.2314 1472.2266 2271.9969 2131.2844 2580.6268 2740.0292 139003420 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 851.2181 477.1207 556.7214 479.7894 715.1864 867.354 863.8045 146401797 NADH_ubiquinone_oxidoreductase Bioleaching Electron transport Acidiphilium cryptum JF-5 4411.8783 4791.6977 7545.3533 4189.8674 3611.583 4666.1375 4184.6946 7622.5567 4979.6058 4819.0041 3968.2399 7715.9732 111018069 pulA Carbon cycling Carbon degradation Starch Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1064.1872 1364.4601 1030.2389 1536.3692 1629.6858 1205.5965 1176.421 938.9526 1177.6026 1236.0143 1199.8608 1243.4916 295667207 ABC_multidrug_fungi Fungi function metal resistance Paracoccidioides brasiliensis Pb01 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Paracoccidioides;species:Paracoccidioides brasiliensis; 3027.2906 5041.6684 4197.8694 3030.7554 5967.2674 4157.1152 5256.4268 2997.1752 4714.1382 3751.2347 3522.0789 4380.4819 145234412 MFS_fungi Fungi function virulence drug resistance Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 968.0119 2239.2365 1335.0737 888.0379 2214.8909 1750.1399 1897.3936 1553.6923 1877.8435 1365.3776 1069.0771 251827891 ahpC Stress Oxygen stress Gallionella ferruginea ES-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Gallionellales;family:Gallionellaceae;genus:Gallionella;species:Gallionella capsiferriformans; 851.2584 1134.457 1029.4392 968.6616 869.4653 927.1702 1621.2326 1599.7612 1379.2574 1434.8776 1431.5424 184197333 sigma_24 Stress Sigma factors Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 3820.508 4008.5934 4952.7813 3932.3686 7423.5553 3282.7108 4339.8868 3345.4878 5484.3322 3049.9594 6398.2204 6762.9825 67154952 amyA Carbon cycling Carbon degradation Starch Azotobacter vinelandii AvOP superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Azotobacter;species:Azotobacter vinelandii; 1783.2584 1427.5485 1159.4222 1564.9148 1013.4802 966.2659 1209.2373 1189.8379 931.9266 1091.7438 2007.5679 1084.7457 307630517 sped_bac soil_benifit Ferrimonas balearica DSM 9799 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Ferrimonadaceae;genus:Ferrimonas;species:Ferrimonas balearica; 1249.5126 565.4636 1077.7248 1107.9517 854.6352 1413.4038 766.8029 806.6643 632.4476 756.4327 31618253 ZntA Metal Resistance Zinc Mycobacterium bovis AF2122/97 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium bovis; 378.6721 1109.0865 955.6513 537.3257 827.3373 884.6943 945.8809 500.1485 665.6086 889.1062 580.8428 732.8268 111153558 gdh Nitrogen Ammonification Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 1484.645 3082.6025 1613.5485 1876.2459 822.8059 3184.762 2820.9648 1853.4183 3102.4146 2444.3916 2177.3051 50952851 mnp Carbon cycling Carbon degradation Lignin Trametes versicolor superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Trametes; 1899.5393 2463.7221 2786.1507 2007.6052 1584.0092 2641.3403 2097.1304 1946.1962 2644.6172 2355.2052 2489.1411 2603.3443 158111560 Catechol Organic Remediation Aromatics Other aromatics Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 1150.0733 1336.8215 1053.582 1639.765 1607.9772 1558.9463 1748.3954 1387.5551 1319.976 1241.2905 1150.5863 1925.1723 117959694 phenol_oxidase Carbon cycling Carbon degradation Lignin Ganoderma lucidum superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Ganodermataceae;genus:Ganoderma; 2039.6406 2580.1508 3061.5213 1417.7897 1527.5129 3425.7527 2386.5873 3431.4402 2348.3557 2326.3064 1463.9152 3183.0211 39995807 cytochrome Energy process Energy process Geobacter sulfurreducens PCA superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter sulfurreducens; 3976.3764 5153.4844 5166.4753 4454.7912 7645.3759 4104.9925 5099.082 3506.2446 4484.3862 3556.4695 5006.7274 4261.7794 150376384 pimF Organic Remediation Aromatics Aromatic carboxylic acid Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 1214.508 2734.8072 1356.345 1161.8515 1768.792 1406.4744 1644.2342 2102.7542 1678.8331 1979.711 1430.0593 87286838 phoB Stress Phosphate limitation Blastopirellula marina DSM 3645 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Blastopirellula;species:Blastopirellula marina; 3634.2692 1970.152 2196.1893 2809.8555 2520.0256 1905.0522 1791.271 1743.9836 2048.081 1999.364 3702.5758 2643.7655 94422934 sod_CuZn soil_benifit Sphingomonas sp. SKA58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 1825.0462 2154.2182 2350.1624 1995.7568 25115.7288 2982.4932 2411.7874 2247.4971 2615.5706 2543.2147 1528.1088 2520.5176 163841735 alkK Organic Remediation Others Renibacterium salmoninarum ATCC 33209 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Renibacterium;species:Renibacterium salmoninarum; 918.9013 1779.294 1066.0787 1252.8989 1067.7821 1861.9831 1228.536 1407.9327 1460.1418 1427.0108 961.873 1479.6125 116624684 CopA Metal Resistance Copper Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 1056.8934 1938.3593 757.2164 825.1937 2091.5591 743.5818 1464.794 864.7898 1052.6561 786.922 1334.8789 945.0602 239505528 glnA Stress Nitrogen limitation Kosmotoga olearia TBF 19.5.1 superkingdom:Bacteria;phylum:Thermotogae;class:Thermotogae;order:Thermotogales;family:Thermotogaceae;genus:Kosmotoga;species:Kosmotoga olearia; 1203.8831 526.0258 940.6912 587.9753 461.899 617.4286 753.1324 829.6657 564.633 84704832 mer Metal Resistance Mercury Parvularcula bermudensis HTCC2503 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Parvularculales;family:Parvularculaceae;genus:Parvularcula;species:Parvularcula bermudensis; 2491.9732 1777.2934 2132.0992 2665.826 2565.9583 2211.5713 1504.6415 1729.5674 1835.8607 2136.6555 3483.5915 2595.4963 109454675 cspA Stress Cold shock Roseobacter denitrificans OCh 114 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter denitrificans; 1484.9539 1829.3977 1918.8486 1337.4811 977.5726 1225.0546 1457.6365 958.0895 1483.5037 1546.1066 1357.8063 1558.4241 288315539 CysJ Sulphur sulfite reductase Enterobacter cancerogenus ATCC 35316 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter;species:Enterobacter cancerogenus; 620.4109 647.7439 601.8785 694.0265 1180.3782 880.8037 600.6873 1015.7338 227237956 narI Stress Oxygen limitation Mobiluncus curtisii ATCC 43063 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Mobiluncus;species:Mobiluncus curtisii; 2238.7409 2083.1147 2591.4888 2293.0821 2144.1528 2482.2203 1676.391 2637.8236 1755.3957 2154.036 4157.9861 2413.6525 71900916 pilin virulence pilin Xylella fastidiosa Ann-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xylella;species:Xylella fastidiosa; 17561.0497 7819.7366 13958.1533 12531.8929 10614.2875 7633.7492 12529.1246 12144.1924 8734.885 12014.9322 9920.984 9367.8923 146339446 fnr Stress Oxygen stress Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 7065.3749 12428.8718 11661.1763 9115.1823 7471.0998 10322.7102 18185.0021 4043.868 11057.45 8121.9841 9377.091 6299.3167 133915200 ppk Phosphorus Phosphorus utilization Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 459.4383 605.1694 755.6461 702.9981 1007.8145 944.665 499.7007 997.8246 583.4023 749.0871 595.0639 41406647 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium avium subsp. paratuberculosis K-10 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium avium; 2699.744 5304.6875 3218.6738 4363.5246 8313.2445 5771.2426 4100.4573 7149.4491 3706.9012 3794.5047 4226.3842 5159.6416 224965930 pstC Stress Phosphate limitation Erwinia pyrifoliae Ep1/96 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Erwinia;species:Erwinia pyrifoliae; 2568.591 4761.7272 4255.9837 1962.7183 5700.2223 3290.8918 3416.5908 3204.3156 3849.4027 3786.5765 1584.0622 2559.7784 90304036 ChrA Metal Resistance Chromium Coccidioides immitis RS superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Coccidioides;species:Coccidioides immitis; 585.6303 677.8147 548.4166 804.7433 835.7723 968.6951 668.059 627.435 736.6172 606.5441 118666721 proO Organic Remediation Aromatics Other aromatics Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 755.4458 532.7038 569.9677 512.0323 527.8716 917.8359 114316807 katE Stress Oxygen stress Granulibacter bethesdensis CGDNIH1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Granulibacter;species:Granulibacter bethesdensis; 13998.2313 12369.8681 12417.6173 15482.0886 13377.1361 12357.4085 10166.4821 9921.6341 13466.2558 13642.8926 25533.6905 11889.2032 146156953 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Flavobacterium johnsoniae UW101 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Flavobacterium;species:Flavobacterium johnsoniae; 1727.7292 1094.9295 2159.3172 635.6875 857.1796 757.1621 1163.8381 2736.9213 936.7842 1229.9844 1270.7092 1898.5247 38259442 silC Metal Resistance Silver Serratia marcescens superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Serratia; 691.9379 1162.1848 831.0942 1026.3281 1273.2655 1006.2441 1253.1912 848.7879 1059.0747 832.1462 1206.5877 1136.3381 112821460 proO Organic Remediation Aromatics Other aromatics Sphingomonas sp. KA1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 3494.8285 5762.5148 6213.3619 4269.7788 5169.5828 4820.8154 5173.4053 7696.8406 4983.2286 6928.1231 3934.7736 6566.0813 39937527 sox Sulphur Sulphur oxidation Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 2660.75 3491.4219 3473.4831 2333.1816 2158.8086 3567.5682 3291.0492 3197.6946 3699.4809 3515.3212 3750.1945 56476525 silC Metal Resistance Silver Azoarcus sp. EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 3268.8167 3549.6426 5340.7456 3198.5775 3032.1227 3828.2713 3751.6821 4919.9752 3762.3618 3820.8464 3620.9402 5396.4834 167364425 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Rhizobium leguminosarum bv. trifolii WSM1325 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 4647.3868 4163.7446 3289.1079 6481.1072 6977.6589 7451.7311 4532.8849 5381.378 3788.5952 5517.7112 5393.8118 6251.2397 163734781 xylA Carbon cycling Carbon degradation Hemicellulose Roseobacter litoralis Och 149 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter litoralis; 908.3725 1990.6802 1818.2208 1304.155 3863.669 1128.6164 2595.2881 1045.8334 1620.2972 1079.1369 1189.9629 268590951 fnr Stress Oxygen stress Providencia rettgeri DSM 1131 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia rettgeri; 3227.4184 2417.301 4330.8475 1498.249 1347.5111 3339.5447 2585.1828 3901.5096 3061.9812 2907.8886 3328.8311 15795659 nitA Organic Remediation Aromatics Other aromatics Rhodococcus rhodochrous superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 1402.896 1366.9321 2659.0393 1980.0457 3683.6292 822.3117 2269.006 1461.9298 1778.6411 1390.491 1161.9499 1821.3351 167588349 fnr Stress Oxygen stress Burkholderia ubonensis Bu superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ubonensis; 4028.4534 5004.7533 5529.1919 6123.095 3458.0107 5804.7298 7462.0484 8885.4075 5368.587 4329.0427 4860.4656 4520.5106 154643 ABC_transporter_II Bioleaching other category Acidithiobacillus ferrooxidans 5293.2654 7260.2238 7374.6161 4979.6941 8415.2657 5186.9304 5471.4018 6979.3235 6055.3501 7755.5682 4212.2818 7162.2986 73669221 arsM Metal Resistance Arsenic Methanosarcina barkeri str. Fusaro superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanosarcinales;family:Methanosarcinaceae;genus:Methanosarcina;species:Methanosarcina barkeri; 1001.0823 742.3159 1027.7664 926.641 596.1533 846.0592 678.275 576.1447 506.7558 995.075 984.1013 262201363 CysJ Sulphur sulfite reductase Gordonia bronchialis DSM 43247 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Gordoniaceae;genus:Gordonia;species:Gordonia bronchialis; 2599.2167 1856.3355 2127.1704 2771.6394 895.9503 2355.9145 3091.0084 1807.3373 1556.228 3010.084 1671.5598 969.8471 108805171 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rubrobacter xylanophilus DSM 9941 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Rubrobacterales;family:Rubrobacteraceae;genus:Rubrobacter;species:Rubrobacter xylanophilus; 2921.1754 4620.3486 3487.1502 3136.8154 5806.1682 3970.8047 3235.6939 4236.7012 3885.6891 3695.034 2393.2589 3450.0054 86169120 ureC Nitrogen Ammonification Synechococcus sp. RS9917 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 2735.1784 4430.9815 3481.4071 5777.5064 3399.5395 4250.8014 6086.1487 4405.1684 4200.2453 3590.6054 4239.7899 3875.1314 153886762 CopA Metal Resistance Copper Ralstonia pickettii 12D superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 756.8025 1741.7417 1403.7437 1129.6075 1294.4623 2080.7337 2007.9551 1426.4038 2561.6477 2161.4226 839.804 1555.6736 196256713 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Cyanothece sp. PCC 7822 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 6403.4313 5452.6286 6036.9689 6600.1935 4396.2992 5883.9831 6102.2185 6716.3219 5244.2812 5867.9692 6829.9065 4997.7097 84382810 cadBD Metal Resistance Cadmium Janibacter sp. HTCC2649 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Intrasporangiaceae;genus:Janibacter; 5445.2921 2587.6307 4475.8789 4903.4947 3772.9286 3258.1974 3257.0629 2841.4901 3736.2682 4394.5116 3902.7007 3822.2482 78367707 CopA Metal Resistance Copper Shewanella sp. PV-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella loihica; 860.4192 682.6841 1531.1291 771.4309 804.3342 655.902 481.0264 781.6087 780.479 116229449 sigma_24 Stress Sigma factors Candidatus Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 1620.8887 1952.1467 2551.985 2168.5373 2257.3602 1829.7074 2320.3582 4022.1287 2869.9368 2806.8323 2241.6397 3005.5442 206589642 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia solanacearum superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 6990.9063 15379.4869 10782.308 6341.5157 17519.4072 9406.503 9995.1334 10792.1331 10244.6454 10121.951 11788.2963 6382.0953 27355922 exaA Organic Remediation Chlorinated solvents Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 3783.4752 1912.4791 2779.6879 3441.8319 3454.4843 2683.0234 2424.8635 2504.9429 1987.3901 2203.1628 5230.0841 2765.4753 6460178 fnr Stress Oxygen stress Deinococcus radiodurans R1 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus radiodurans; 4614.5448 5248.8751 5674.8921 4525.5937 6159.3275 4709.4359 5029.2016 6809.1859 4878.5862 5804.8676 4649.1452 5142.6547 283577634 sigma_24 Stress Sigma factors Rhodopseudomonas palustris DX-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 4588.9429 5594.8865 3390.5644 3200.1116 8121.81 5507.5483 3596.8455 3912.0767 6370.7334 5214.7878 1813.0888 3383.376 16410502 CadA Metal Resistance Cadmium Listeria monocytogenes superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Listeriaceae;genus:Listeria; 822.6745 526.6073 689.6293 563.4764 773.9131 1252.0786 425.6491 619.2225 441.3092 620.6884 90327694 phn Organic Remediation Herbicides related compound Photobacterium profundum 3TCK superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Photobacterium;species:Photobacterium profundum; 3085.2509 2724.4475 2881.9151 2526.1523 3541.0535 2123.3591 2696.2032 3519.5956 1930.0773 2677.7034 3974.2241 15141335 pcc Carbon cycling Carbon fixation Sinorhizobium meliloti 1021 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium meliloti; 3977.9748 3172.0553 3466.0243 5093.1096 2897.984 3751.037 2863.4391 2732.9511 4002.4231 3555.1965 4022.055 4167.3833 56964737 AceA Carbon cycling Carbon degradation Others Bacillus clausii KSM-K16 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus clausii; 1703.3631 1512.21 1280.4053 1742.1882 2004.5538 1584.3794 1785.1574 1459.9205 770.9033 1485.5844 2283.5866 1543.4885 266619825 nplT Carbon cycling Carbon degradation Starch Clostridium hathewayi DSM 13479 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium hathewayi; 885.0003 570.5557 575.7782 971.5106 748.8637 746.4235 1092.8489 879.0244 588.3412 607.8121 835.4556 903.5336 218439766 sigma_70 Stress Sigma factors Cyanothece sp. PCC 7424 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 2048.9626 1163.1433 1348.4791 1718.6284 977.1176 1494.1521 2132.1318 2085.5823 1190.2417 1770.8426 845.5391 187426354 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Akkermansia muciniphila ATCC BAA-835 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobiaceae;genus:Akkermansia;species:Akkermansia muciniphila; 1798.9741 1681.686 2085.2094 2139.6904 821.4029 1546.7643 1374.5691 2295.5995 1502.1769 1326.7305 1398.6163 997.8474 56550646 ChrA Metal Resistance Chromium Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 1240.4727 1761.8749 1589.1076 1697.1233 1432.8479 2202.792 1545.6935 1541.0191 2057.5749 2291.1433 1075.5334 1745.1481 149376813 pilin virulence pilin Marinobacter algicola DG893 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter algicola; 906.8278 2144.4574 1826.0285 1207.0807 1293.5333 1959.3635 1723.9867 1690.9427 2406.9498 1931.137 824.9568 2081.3709 58041826 nagI Organic Remediation Aromatics Aromatic carboxylic acid Klebsiella pneumoniae superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella; 633.8701 1235.7348 982.4912 702.3954 680.2101 1619.2575 1659.9599 1370.3247 1614.8687 1100.3084 520.1807 1420.584 84509018 pcaG Organic Remediation Aromatics Other aromatics Loktanella vestfoldensis SKA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Loktanella;species:Loktanella vestfoldensis; 1310.737 2461.25 2364.7019 1396.1202 1630.065 1674.147 1579.0718 2882.8383 1831.4691 1822.5879 2910.1002 2119.7116 90903267 aoxB Metal Resistance Arsenic uncultured bacterium superkingdom:Bacteria; 2650.7698 2684.4614 2041.2711 2836.593 3534.5504 2513.4939 2435.657 2477.1152 2585.1553 2774.7957 1863.6846 2194.3606 220698133 pheA Organic Remediation Aromatics Other aromatics Aspergillus flavus NRRL3357 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus flavus; 3102.0547 1873.2406 1864.4273 3153.0972 1880.0844 1705.6151 1795.1365 1445.1533 1681.5356 1930.1543 1665.2412 1717.1203 21108741 glnA Stress Nitrogen limitation Xanthomonas axonopodis pv. citri str. 306 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas axonopodis; 1255.584 1169.6137 1463.501 1112.8006 1655.0158 1196.174 1100.9698 1929.179 938.7179 955.6024 2067.9898 1236.3096 242129521 gyrB other category gyrB Dickeya dadantii Ech703 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Dickeya;species:Dickeya dadantii; 1659.0096 674.6031 539.8908 537.254 466.0206 956.4915 1022.3596 219847774 BchY other category chlorophyllide reductase Chloroflexus aggregans DSM 9485 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aggregans; 1341.7724 1674.1934 2442.2047 1186.3906 2546.4079 2095.3161 1452.0391 1841.0296 1845.1799 1730.1018 2009.8263 1394.2934 iegcoxL125 CODH Carbon cycling Carbon fixation 462.5035 753.3192 617.9489 621.6519 376.0848 712.9108 579.0657 90331507 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid marine gamma proteobacterium HTCC2207 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 578.0992 855.395 1023.0127 544.7497 1073.8764 830.9148 1012.014 1029.3699 1081.6493 1112.2104 197333186 amyA Carbon cycling Carbon degradation Starch Streptomyces sp. Mg1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 3093.2834 3244.1144 14904.7661 3266.0241 2996.0806 3413.0099 2130.5374 2459.0314 1963.9524 3101.3697 6325.7982 3313.4097 89339444 ZntA Metal Resistance Zinc Mycobacterium flavescens PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 3124.2046 2630.0889 3814.6231 1560.6138 1819.3318 2846.6751 2959.0893 2808.8852 3236.4123 2844.5749 1532.5535 3542.7811 163258514 phoB Stress Phosphate limitation Bordetella petrii superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella; 3534.4672 1384.6315 1851.3709 3167.6348 1987.8504 2315.4876 3521.3369 1994.0882 1998.0687 2448.6837 1941.3146 156861660 ChrA Metal Resistance Chromium Bacteroides uniformis ATCC 8492 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides uniformis; 745.9223 723.1273 520.9951 518.3143 655.1266 350.554 538.1831 494.4624 364.9083 559.7973 85712934 grpE Stress Heat shock Idiomarina baltica OS145 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Idiomarinaceae;genus:Idiomarina;species:Idiomarina baltica; 969.9999 479.0448 621.4978 616.0511 437.8722 614.5373 488.8448 811.527 605.3611 151590210 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Methylobacterium extorquens PA1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 1932.1554 1266.2405 1296.4611 2624.6375 1319.5687 1360.564 1007.0931 1658.5173 1761.7866 1537.2077 142850505 CorC Metal Resistance Cobalt Aeromonas salmonicida subsp. salmonicida A449 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas;species:Aeromonas salmonicida; 2061.1726 2206.743 1498.3667 1406.3797 3489.9196 1582.5099 4946.3521 1217.3025 1633.7167 1658.8431 1771.5022 1451.5504 16329402 hrcA Stress Heat shock Synechocystis sp. PCC 6803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechocystis; 2777.114 2495.7441 3055.9963 2149.5252 2105.1658 2939.2396 1981.8374 3278.0186 2615.1396 2432.7785 1841.7021 2637.1602 171281444 ahpF Stress Oxygen stress Streptococcus infantarius subsp. infantarius ATCC BAA-102 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus;species:Streptococcus infantarius; 6711.0712 5434.6106 5807.6812 4788.6821 4217.5677 4990.988 5151.371 7144.4621 4822.0888 5277.3087 6392.4184 5916.5549 154685192 nagG Organic Remediation Aromatics Aromatic carboxylic acid Bacillus amyloliquefaciens FZB42 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus amyloliquefaciens; 1539.2607 1246.0053 996.2165 1645.0727 1624.946 23917.8308 697.711 906.3679 818.6639 1454.3296 1684.389 1137.7388 144897605 dmsA Organic Remediation Others Magnetospirillum gryphiswaldense MSR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum gryphiswaldense; 3873.1089 2325.0576 4620.9684 3717.8507 2015.5503 4300.9049 3864.6294 2261.8165 3345.3881 8217.4014 3393.211 3082.3218 194560427 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Burkholderia cenocepacia PC184 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia cenocepacia; 8059.6202 11694.9898 10744.0401 11034.1097 10039.7756 13611.8971 11295.582 10572.5858 15643.0887 14365.5257 8476.9612 14059.8925 84712064 nagG Organic Remediation Aromatics Aromatic carboxylic acid Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 5011.1334 2585.0694 3186.6627 4614.3674 3034.3599 2116.1801 2380.554 1759.3318 2190.3262 2801.5729 6321.8342 2499.1226 67919377 nifH Nitrogen Nitrogen fixation Chlorobium limicola DSM 245 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium limicola; 953.9215 1764.7929 2294.8833 1191.2874 1774.84 1413.4739 1992.4818 2577.1933 1934.3874 1825.4018 1109.6244 2095.0208 67155823 atzA Organic Remediation Herbicides related compound Azotobacter vinelandii AvOP superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Azotobacter;species:Azotobacter vinelandii; 5463.6272 2948.7037 3679.0278 4644.3102 3029.9044 4023.4658 5051.8209 5184.4536 3063.845 3804.6104 3522.3913 3075.1672 152070183 mer Metal Resistance Mercury Beggiatoa sp. PS superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Thiotrichales;family:Thiotrichaceae;genus:Beggiatoa; 1381.6058 1206.9111 1017.1679 1326.6464 1528.6315 1142.9147 752.8369 748.8308 748.2112 830.7392 2513.2138 1039.1543 221734314 grpE Stress Heat shock Agrobacterium vitis S4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium vitis; 2667.7617 2286.1036 2229.6737 3051.3017 3552.0885 2888.2492 1479.5294 2734.2383 2713.3356 1525.7785 1874.9325 219546809 ppx Phosphorus Phosphorus utilization Candidatus Methanosphaerula palustris E1-9c superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanomicrobiales;genus:Methanosphaerula;species:Methanosphaerula palustris; 6336.2027 4242.5446 6855.1348 6293.8483 3263.6376 4097.5742 4571.6657 6183.1529 3957.563 4786.6103 4527.7488 5310.1893 24380394 CadA Metal Resistance Cadmium Streptococcus mutans UA159 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus;species:Streptococcus mutans; 1290.1722 2977.3745 2428.9955 1443.1575 3160.0237 2068.7388 2220.7852 2365.7922 1835.3715 2488.4433 1677.4939 1791.0416 78356360 ZntA Metal Resistance Zinc Desulfovibrio desulfuricans G20 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio alaskensis; 3244.7326 3974.2373 4770.1435 3427.2577 1868.576 4379.0515 1996.938 3951.9239 3857.8714 3828.6182 5736.2825 4548.9091 221066517 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 1799.2428 563.1572 1052.935 1297.5254 644.642 805.6354 753.5481 701.8178 863.6871 1012.7076 1166.1541 850.2109 116672125 alkK Organic Remediation Others Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 1669.4196 1313.1968 1524.9012 2013.1526 1095.6716 1239.8763 1496.8876 924.2338 1424.9561 1530.4289 854.507 1353.886 269218475 ABC_antibiotic_transporter Antibiotic resistance transporter Actinomyces sp. oral taxon 848 str. F0332 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Actinomyces;species:Actinomyces sp. oral taxon 848; 7732.0064 6469.5482 5422.4575 10014.5755 6441.0093 9026.6881 8503.35 7391.123 4883.6418 8079.2241 7564.9632 5143.8631 256666162 Tet Antibiotic resistance other Streptomyces sp. AA4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 3761.4999 1501.5254 1611.8235 3110.612 1548.4822 1515.7375 1599.8674 1479.8321 1789.7542 1905.2197 2947.6507 1570.5268 192361526 nmoA Organic Remediation Aromatics Nitoaromatics Cellvibrio japonicus Ueda107 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Cellvibrio;species:Cellvibrio japonicus; 1165.3324 1474.8871 1686.0133 1009.1651 994.3992 672.0309 754.9647 1893.314 872.7966 950.4603 1346.8193 1368.408 119371704 narG Nitrogen Denitrification Castellaniella defragrans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Castellaniella; 2326.3261 2507.0977 3157.8309 2398.5462 2064.409 1931.2456 2106.4155 3824.3368 2426.8113 3170.3114 1956.852 3168.2176 110835546 pstS Stress Phosphate limitation Alcanivorax borkumensis SK2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax;species:Alcanivorax borkumensis; 1094.5979 1381.7135 1081.7959 1319.5374 1506.8091 1298.4451 1843.0591 1235.7857 1166.1051 1028.631 1450.4854 1280.363 283851053 sigma_70 Stress Sigma factors Desulfovibrio sp. FW1012B superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio; 1007.5566 1415.6724 1365.8684 1229.3392 700.4778 15491.1908 2044.224 500.6839 1419.819 892.8358 1002.5227 897.1893 17430780 silC Metal Resistance Silver Ralstonia solanacearum superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 6872.3528 2885.1948 4533.1644 5571.0573 2776.8515 2225.4059 3084.9407 2775.1466 3487.8313 5004.1327 4224.246 5233.1783 194347574 iro virulence Iron oxidation Stenotrophomonas maltophilia R551-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 5699.8207 4104.3643 6422.2071 3608.9417 2234.3623 5722.874 4577.5729 6753.7241 5507.4773 5147.7891 3018.9076 6155.3604 133912646 ureC Nitrogen Ammonification Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 2243.8787 16827.682 1432.4447 2243.6546 2221.8869 1598.4383 1566.2137 2216.3286 1251.6083 1496.2931 2481.0929 1945.4069 226939884 hly virulence hemolysin Laribacter hongkongensis HLHK9 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Laribacter;species:Laribacter hongkongensis; 4928.0681 4277.9307 1695.5512 3623.2967 3205.2233 2836.5946 2301.4782 1740.1223 2636.562 2497.1084 4303.4792 2145.8305 218288552 pstC Stress Phosphate limitation Alicyclobacillus acidocaldarius LAA1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Alicyclobacillaceae;genus:Alicyclobacillus;species:Alicyclobacillus acidocaldarius; 929.6493 548.6562 545.3524 713.958 564.6746 413.7655 849.4778 565.4627 537.6087 674.803 568.2564 86280862 sigma_24 Stress Sigma factors Rhizobium etli CFN 42 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 4279.2389 3215.2461 2243.1518 3806.6586 3367.0749 2833.3267 2514.6983 2536.8901 3462.6405 2533.606 4101.1956 2246.0012 83655380 vanA Carbon cycling Carbon degradation Others Burkholderia thailandensis E264 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia thailandensis; 1464.6577 3327.043 2607.3369 1810.8402 1180.8188 2329.9055 2720.7953 2857.2014 2605.5758 3039.4741 1582.4045 2591.1157 94471277 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3043.3422 4601.1583 4625.2721 3169.6484 3107.8281 4907.0683 5021.3101 4605.9783 6330.0087 5257.6446 2641.313 4772.7876 20142114 dsrA Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 1584.3395 1940.1815 2126.5742 1277.938 1898.2477 1493.9387 1467.0306 1722.9585 1153.1282 1761.2283 3051.7973 1913.1496 239992254 pstB Stress Phosphate limitation Streptomyces roseosporus NRRL 11379 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces filamentosus; 3795.7876 3086.2087 4405.6531 3309.3631 3498.7013 3322.0009 2862.8025 4892.9403 3404.9725 3421.3946 6241.0028 3879.7592 296026659 phzF soil_benifit Tsukamurella paurometabola DSM 20162 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Tsukamurellaceae;genus:Tsukamurella;species:Tsukamurella paurometabola; 1336.7778 2383.7053 2596.1197 1394.5656 1965.3834 2188.4564 2594.5941 1930.0329 2184.1464 2326.822 1654.5504 2695.4999 106881492 TerZ Metal Resistance Tellurium Psychromonas ingrahamii 37 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Psychromonadaceae;genus:Psychromonas;species:Psychromonas ingrahamii; 1602.6208 1739.6519 1701.367 1844.8237 1734.9113 1727.4213 1313.1231 1308.8834 1506.0211 1477.3101 2548.1455 1968.1889 81343965 tape_measure_protein Bacteria phage STRUCTURAL Enterobacteria phage RTP superkingdom:Viruses;order:Caudovirales;family:Siphoviridae;genus:T1-like viruses; 523.4701 382.2904 553.9835 635.5226 333.7616 409.9233 326.7051 477.4172 209498679 pstC Stress Phosphate limitation Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 9346.1522 4334.8474 8464.1906 8791.4687 5178.3042 5949.6113 5167.2917 5540.4402 5635.1031 6301.2163 9845.4507 5818.808 91688107 dehH109 Organic Remediation Chlorinated solvents Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 3408.835 4152.4165 4058.363 4144.8299 4086.235 5162.6115 3794.7413 2873.2396 4704.3181 4548.6086 3629.4209 4566.8161 2196840 gyrB other category gyrB Shewanella oneidensis MR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella oneidensis; 1037.645 1048.704 991.0844 548.0244 516.3509 771.2581 648.3896 561.4787 833.3075 904.8145 848.8239 39981909 cap virulence capsule Geobacter sulfurreducens PCA superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter sulfurreducens; 1127.6145 1729.8911 1214.5123 1255.159 951.8824 1785.7359 1723.0691 1401.5416 2145.9671 1760.5024 1578.918 167664045 obgE Stress Radiation stress Clostridium scindens ATCC 35704 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium scindens; 657.2058 27084.1817 761.7843 890.5857 1266.3832 875.6159 671.2836 741.9435 621.2727 818.6571 1432.2267 658.1069 254818779 narI Stress Oxygen limitation Mycobacterium intracellulare ATCC 13950 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium intracellulare; 917.1841 747.8988 1174.9649 582.6066 889.615 823.7803 1160.6061 1033.0859 862.9097 898.2329 117164963 ppx Phosphorus Phosphorus utilization Streptomyces ambofaciens ATCC 23877 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces ambofaciens; 2071.7169 2408.4449 2477.7998 2717.7396 3184.6522 2376.2849 3306.1669 2035.6118 1896.4585 2089.801 3051.1006 2403.0099 209550717 fnr Stress Oxygen stress Rhizobium leguminosarum bv. trifolii WSM2304 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 15836.88 11234.3337 16590.5853 18521.5603 11368.2892 12979.7097 12785.8398 16526.7501 14345.2457 14490.2884 13186.6484 14382.5066 197789551 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 1220.1227 1109.1982 689.614 1303.1899 1185.2262 628.9727 1065.1341 658.9467 253986247 pstB Stress Phosphate limitation Methylovorus sp. SIP3-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Methylophilales;family:Methylophilaceae;genus:Methylovorus;species:Methylovorus glucosotrophus; 1044.576 393.4656 611.5744 943.6088 565.2879 750.0497 819.8708 518.0748 391.6409 670.1661 257323051 pec_CDeg Fungi function carbon degradation Colletotrichum gloeosporioides superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Glomerellaceae;genus:Glomerella;species:Glomerella cingulata; 1143.9213 908.3276 963.3282 1540.3278 979.2979 767.6763 785.2862 589.9259 1099.7994 990.1514 965.4527 788.0034 219720558 cnrC Metal Resistance "Cobalt,Nickel" Stenotrophomonas sp. SKA14 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas; 1751.6388 1331.2912 1659.0134 2088.2357 635.2002 922.8628 908.3904 1102.7779 1430.8913 1393.8409 872.7418 1175.0428 192292585 MFS_antibiotic Antibiotic resistance transporter Rhodopseudomonas palustris TIE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 7705.9612 5833.5673 5390.6161 5461.3128 7391.6214 7497.8563 5581.5848 5084.8354 7600.7679 10456.797 4197.2183 5039.2913 116106596 SMR_antibiotics Antibiotic resistance transporter Lactococcus lactis subsp. cremoris SK11 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Lactococcus;species:Lactococcus lactis; 1789.8267 926.2691 539.7511 1838.112 838.3892 1512.9631 3198.2206 927.6351 1262.2671 1263.8299 993.659 91802638 aoxB Metal Resistance Arsenic Nitrobacter hamburgensis X14 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter hamburgensis; 814.6688 1710.9939 507.424 1555.0232 646.6501 1317.5162 622.8496 560.3837 791.4779 1185.9746 482.7728 118468324 CDH Carbon cycling Carbon degradation Cellulose Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 7456.3891 5085.5411 5657.0521 7174.3389 6136.4623 4756.294 5597.2532 4159.028 4463.7443 5133.7305 6480.829 5626.4178 77964467 alkK Organic Remediation Others Burkholderia sp. 383 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1419.5789 1230.676 1294.0869 1450.8555 1915.3492 1273.857 1155.029 1011.9414 1231.6071 1443.5763 1883.7451 1749.6111 56312640 cat_bac soil_benifit Aromatoleum aromaticum EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 1842.7097 3091.0763 2939.3315 1718.2997 2298.2559 1846.5033 2338.0109 3681.0545 2249.4912 2604.3064 2080.2183 2732.3803 73538380 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 6466.5766 4109.1937 4120.4902 5316.5436 2945.4397 2153.526 3130.4086 2255.1591 2390.618 3219.6559 6939.0743 2944.9433 167541078 mcrA Carbon cycling Methane Methane production uncultured bacterium superkingdom:Bacteria; 6381.7247 1720.2067 3606.1414 4769.3823 3259.9973 2311.599 2870.7686 2040.9014 3059.5931 3919.7365 6166.0106 2620.2557 150026841 fnr Stress Oxygen stress Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 1877.4322 4294.6999 2028.4618 1676.6181 3985.939 2294.9526 3058.6356 1966.9927 2499.8617 1872.0329 2341.7502 1623.1087 118701836 nagI Organic Remediation Aromatics Aromatic carboxylic acid Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 1985.3338 5373.663 2413.9472 1529.1643 3624.2859 2706.6245 3256.9941 2400.713 2422.9322 2135.1703 2613.2042 1612.3974 194292621 ArsC Metal Resistance Arsenic Cupriavidus taiwanensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus; 1914.4785 851.5595 1290.0886 1323.5096 1264.5631 961.2556 1089.5913 1080.9963 940.372 1032.4388 1261.4839 972.3464 254819312 oxyR Stress Oxygen stress Mycobacterium intracellulare ATCC 13950 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium intracellulare; 5935.4232 2420.9453 4378.5661 5719.9494 4495.1163 3777.8686 3703.0368 2587.0341 3794.443 4559.3395 8033.3229 4093.4346 145217052 limEH Carbon cycling Carbon degradation Others Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 2655.0279 903.9059 1969.2795 1244.7125 797.3288 1143.077 1383.8573 857.0588 1023.3604 1644.7003 1226.9716 82736341 nhh Organic Remediation Aromatics Nitoaromatics Pseudomonas putida F1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 2805.0935 2605.2537 2834.7344 3340.9359 3334.186 3524.9578 2697.5796 2292.9608 3155.2192 3335.1617 3321.93 3460.9089 255325921 pstS Stress Phosphate limitation Corynebacterium tuberculostearicum SK141 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium tuberculostearicum; 921.5952 531.1493 842.595 1027.3418 688.1089 1116.1793 788.5747 112462627 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 1441.8228 11000.7263 1589.6456 1258.1861 1772.1288 1896.6218 1638.4073 1025.8613 1520.1862 1983.0274 1657.5054 2120.7003 196202824 sigma_70 Stress Sigma factors Cyanothece sp. PCC 7822 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 494.3786 450.3219 446.0293 521.725 554.8309 513.6827 427.9368 516.3478 500.7759 86557162 sigma_70 Stress Sigma factors Synechococcus sp. JA-2-3B'a(2-13) superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 9474.6724 3712.2291 5677.7709 6930.5641 3858.2465 4434.6391 4711.0519 3534.0723 3986.8485 5271.0332 8233.0154 4647.2327 119954994 TerC Metal Resistance Tellurium Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 1989.874 811.688 1318.615 1990.086 995.6102 1295.9522 1875.6781 1393.5739 1648.3131 708.6056 901.6935 73538369 tfdA Organic Remediation Aromatics Chlorinated aromatics Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 15550.0601 9020.2 11704.5331 16003.106 11923.14 12652.511 10558.2987 10772.621 16014.6898 12630.8066 14431.3871 12333.187 170143145 ChrA Metal Resistance Chromium Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 2113.3839 1176.8132 2296.0756 2451.3638 1337.8417 1905.4909 1074.5653 1966.1938 7578.6204 1757.8113 2115.7507 1988.4441 88918533 ppx Phosphorus Phosphorus utilization Geobacter uraniumreducens Rf4 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter uraniireducens; 1719.0923 1221.9983 1303.0432 1227.2571 1542.3582 1728.4832 1172.8767 1044.7561 1193.0375 1301.0924 2493.1532 1532.434 149186124 AceB Carbon cycling Carbon degradation Others Erythrobacter sp. SD-21 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 1817.766 1960.7734 2358.6535 2227.1217 2751.9387 2093.8504 2246.5014 1331.3913 1815.9643 1418.8426 3088.3147 2289.1138 23493700 TerC Metal Resistance Tellurium Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 982.5457 1240.08 774.562 826.5908 1080.94 727.7131 442.3849 803.639 604.6147 480.5928 886.1474 678.1972 39975535 exochitinase Carbon cycling Carbon degradation Chitin Magnaporthe grisea 70-15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe;species:Magnaporthe oryzae; 1963.1101 1589.9778 990.6915 2108.4052 2125.8 1414.3489 2272.2234 1521.495 1253.6644 1666.6038 1264.463 1512.2269 121495628 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 848.9883 521.4508 849.1523 1145.2911 700.4778 636.3452 666.7472 366.4831 653.383 731.9161 1184.461 2286.6687 149385868 P450 Energy process Energy process Pichia stipitis CBS 6054 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Debaryomycetaceae;genus:Scheffersomyces;species:Scheffersomyces stipitis; 691.727 1026.5912 968.4514 716.371 496.7883 684.3168 37575471 bphA Organic Remediation Aromatics Polycyclic aromatics Mycobacterium flavescens superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 2348.9058 1946.8076 2353.303 2099.2827 2523.6659 2248.7377 1838.0925 1962.0905 1601.6356 1727.0701 4052.398 2796.4692 73534161 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 782.1224 497.9865 336.87 459.2386 279.82 459.0846 88696577 endochitinase Carbon cycling Carbon degradation Chitin Bionectria ochroleuca superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Bionectriaceae;genus:Bionectria; 898.4461 1309.5014 662.7701 988.8654 1697.1439 847.0045 878.7571 1168.563 1077.2386 840.8729 229538994 sigma_24 Stress Sigma factors Planctomyces limnophilus DSM 3776 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Planctomyces;species:Planctomyces limnophilus; 2412.0779 721.6874 1478.4767 1958.0749 866.1222 1234.836 1890.0068 1999.1417 1152.138 1650.2449 1084.5186 1246.7599 72609101 amyA Carbon cycling Carbon degradation Starch Burkholderia cepacia AMMD superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ambifaria; 1299.521 1569.3731 1611.5566 1619.6227 1797.9103 1830.6483 1027.8948 1461.7085 1369.096 1346.7712 839.8704 271502546 sigma_32 Stress Sigma factors Dickeya dadantii Ech586 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Dickeya;species:Dickeya dadantii; 736.7481 1203.5343 865.582 763.4863 1489.8024 959.4758 1835.9246 671.1214 1005.408 894.7229 1279.5023 897.6012 148259190 NADH_ubiquinone_oxidoreductase Bioleaching Electron transport Acidiphilium cryptum JF-5 772.4914 2531.4233 2225.341 973.4009 3158.7155 1776.8519 1625.9392 2384.1907 1942.3669 1889.8434 921.1513 1487.5017 259345394 AceB Carbon cycling Carbon degradation Others Silicibacter sp. TrichCH4B superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 814.4452 1145.9897 423.3901 405.2974 214037946 atzA Organic Remediation Herbicides related compound marine gamma proteobacterium HTCC2148 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 677.7131 571.1723 791.7622 432.7863 629.0573 580.0946 391.1118 475.0087 446.3956 386.4407 161163802 chnB Organic Remediation Other Hydrocarbons Sorangium cellulosum 'So ce 56' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Polyangiaceae;genus:Sorangium;species:Sorangium cellulosum; 45945.9251 44633.3823 48587.2532 60759.3302 43270.8741 56619.0319 44285.0807 42723.0103 54811.4723 60803.3055 49791.7354 58788.3489 90023392 pstB Stress Phosphate limitation Saccharophagus degradans 2-40 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Saccharophagus;species:Saccharophagus degradans; 1697.4528 1848.2057 1298.0562 1806.6761 2391.461 1158.3794 1126.6803 1270.4887 927.0107 1121.0055 2565.6835 1817.5999 39647574 badK Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1055.389 1379.0503 822.4696 1072.0094 903.4598 1892.12 955.0456 1064.8008 1132.7309 1155.9285 886.628 1219.6935 118435049 fnr Stress Oxygen stress Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 924.6525 1105.0881 740.6293 535.6135 1283.7122 579.2528 2159.8324 1021.5884 699.3547 1330.4825 688.4278 39301 nplT Carbon cycling Carbon degradation Starch Alicyclobacillus acidocaldarius superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Alicyclobacillaceae;genus:Alicyclobacillus; 1131.9397 1021.5388 1034.7316 1111.9057 1288.8882 1016.7061 855.6446 852.7581 817.2253 799.0451 1402.3962 1087.8401 262191504 pilin virulence pilin Vibrio cholerae CT 5369-93 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio cholerae; 1163.6869 623.945 1228.0379 882.6028 781.125 396.6099 1233.1588 222111334 CopA Metal Resistance Copper Diaphorobacter sp. TPSY superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax ebreus; 2515.1473 2514.1476 2749.7984 2426.7391 3183.2397 2117.2682 2625.7072 2709.0149 2199.8987 2447.6718 4268.211 2446.9878 113529744 B_lactamase_C Antibiotic resistance Beta-lactamases Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 1433.3067 1520.6711 1673.1895 1442.2535 2911.7676 1591.4238 1271.9794 2298.3351 1824.3865 1852.1232 1867.3844 2065.9632 260221223 vanA Carbon cycling Carbon degradation Others Curvibacter putative symbiont of Hydra magnipapillata superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Curvibacter; 7332.812 11041.8701 14898.0293 8062.3905 9061.5584 6899.2459 7117.8612 14709.342 9183.7768 8322.299 15091.6553 11782.8861 87135843 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Novosphingobium aromaticivorans DSM 12444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium;species:Novosphingobium aromaticivorans; 1676.297 1479.8057 1313.4826 1484.1953 1927.3506 1435.8186 866.2201 1407.3275 1587.7267 1066.8984 1666.5867 1616.5309 91682484 rubisco Carbon cycling Carbon fixation Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1988.2755 2995.265 3089.2045 2540.6717 6547.5429 2124.451 3183.921 2756.6028 2128.0044 2250.7766 2656.2803 2643.3947 256805197 phoB Stress Phosphate limitation Streptomyces viridochromogenes DSM 40736 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces viridochromogenes; 1354.0562 841.5485 786.94 593.4925 664.8048 817.3394 1436.1907 702.009 117647704 nitA Organic Remediation Aromatics Other aromatics Acidothermus cellulolyticus 11B superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Acidothermaceae;genus:Acidothermus;species:Acidothermus cellulolyticus; 2070.9782 2915.2036 1994.9919 3339.3059 1863.9087 2246.7934 5289.1973 1596.1541 2909.6946 1471.4589 1355.2135 78220137 obgE Stress Radiation stress Desulfovibrio desulfuricans subsp. desulfuricans str. G20 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio desulfuricans; 2771.4456 2320.088 2238.2084 2357.0701 2618.5583 2151.821 2109.4666 2480.7101 2195.3119 2112.2791 2004.9973 2145.2263 133778496 endochitinase Carbon cycling Carbon degradation Chitin uncultured bacterium superkingdom:Bacteria; 1888.2183 1229.3253 1804.6846 1609.7742 1224.1224 1520.7404 1408.9569 2545.2743 1969.1478 1610.202 1775.6825 1601.8647 116619828 sigma_24 Stress Sigma factors Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 2211.9098 1399.0051 1512.1065 2277.1724 1390.0563 2047.8149 2082.0298 2368.6488 1831.1313 1892.568 1872.3334 1951.1607 74422794 cbdA Organic Remediation Aromatics Chlorinated aromatics Pseudomonas fluorescens superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 569.2506 928.4481 867.6147 584.5973 861.2055 1190.5523 643.152 856.0163 1453.0119 1333.4934 229209680 sigma_70 Stress Sigma factors Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiopsaceae;genus:Nocardiopsis;species:Nocardiopsis dassonvillei; 1431.4128 1791.1445 1012.8966 1824.661 2092.6539 1458.1756 1244.8518 1616.1152 1165.7327 1544.8755 2634826 pcc Carbon cycling Carbon fixation Bacillus subtilis subsp. subtilis str. 168 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus subtilis; 3054.6119 1066.3607 1456.493 1858.8226 1592.146 1252.1255 1626.1801 2243.9021 8979.8125 1139.5585 1119.1315 257054115 srt virulence surface protein Saccharomonospora viridis DSM 43017 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharomonospora;species:Saccharomonospora viridis; 3916.3878 5031.7802 4950.3023 3313.8833 6481.9429 4370.347 3951.8834 5016.0347 4421.1558 3674.5994 4133.1928 4639.268 213692769 cellobiase Carbon cycling Carbon degradation Cellulose Bifidobacterium longum subsp. infantis ATCC 15697 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium longum; 3630.7768 1065.01 2338.2546 3083.1485 2404.7137 1801.5148 1874.3384 1258.227 2552.3635 2754.9753 3591.0776 1730.4956 18312527 AceB Carbon cycling Carbon degradation Others Pyrobaculum aerophilum str. IM2 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Thermoproteales;family:Thermoproteaceae;genus:Pyrobaculum;species:Pyrobaculum aerophilum; 578.5458 848.3101 820.2887 837.3297 1343.148 1122.4694 700.3606 621.1221 854.7291 804.8442 1198.6836 1021.4807 256371060 glnA Stress Nitrogen limitation Acidimicrobium ferrooxidans DSM 10331 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Acidimicrobiales;family:Acidimicrobiaceae;genus:Acidimicrobium;species:Acidimicrobium ferrooxidans; 685.2621 739.4377 544.8672 599.2804 974.103 669.0247 569.2903 919.5011 717.4696 724.3118 561.527 576.7312 224817399 sigma_32 Stress Sigma factors Thioalkalivibrio sp. K90mix superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Thioalkalivibrio; 3735.1995 2784.2866 3720.2909 4854.2111 2713.4319 3514.7127 5832.7484 4484.0641 2951.1532 3235.4899 3364.0931 3167.1602 262274973 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Grimontia hollisae CIP 101886 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;species:Grimontia hollisae; 2136.7964 4911.0318 3328.917 2207.0822 7065.2078 4046.2293 3114.488 4542.2654 4065.1526 4722.9392 1880.8862 3471.5652 225194061 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 800.9948 1278.8938 831.7313 678.5891 1183.9661 1133.911 1236.9723 619.6056 1347.5956 1244.0541 1601.5351 221533447 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Rhodobacteraceae bacterium KLH11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 689.4933 493.2391 638.291 677.7741 730.8504 485.5629 377.1332 683.3309 443.0453 169832167 glnA Stress Nitrogen limitation Candidatus Desulforudis audaxviator MP104C superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Candidatus Desulforudis;species:Candidatus Desulforudis audaxviator; 1059.1501 1029.9807 1967.4832 1145.4007 2026.471 1192.42 1244.3973 1195.3332 1110.0038 819.5057 2242.7688 2450.4552 209401916 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 7049.8137 8442.8795 8155.1175 7480.417 10494.4632 7448.179 10912.1208 6192.679 9334.7062 6791.8031 9416.3472 7985.7726 94984918 pcc Carbon cycling Carbon fixation Deinococcus geothermalis DSM 11300 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus geothermalis; 1129.3741 1646.8224 1400.8794 1382.2172 2275.5993 1563.5154 1705.5655 1762.4305 1687.6746 2198.2384 1864.7705 157285680 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 1893.8868 2741.994 2242.0614 2737.9982 1535.1663 2893.5631 3216.3665 11058.7176 2210.9215 2073.9447 2176.9654 1406.934 95930284 sigma_38 Stress Sigma factors Desulfuromonas acetoxidans DSM 684 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Desulfuromonadaceae;genus:Desulfuromonas;species:Desulfuromonas acetoxidans; 605.612 672.2462 683.9722 403.4982 410.682 225172592 glnA Stress Nitrogen limitation Desulfonatronospira thiodismutans ASO3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfohalobiaceae;genus:Desulfonatronospira;species:Desulfonatronospira thiodismutans; 766.2185 387.0051 617.9302 625.2235 487.5764 678.8802 545.1935 694.7877 189348143 B_lactamase_C Antibiotic resistance Beta-lactamases Burkholderia multivorans ATCC 17616 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 1673.4225 1406.229 749.8876 816.7479 641.656 826.0803 535.5831 771.9478 1259.8741 1111.4551 259488988 MFS_fungi Fungi function virulence drug resistance Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 2232.797 3438.3492 3065.9995 2523.0978 2775.3158 3401 2741.9235 3035.11 2884.3465 3516.0135 2551.7492 3068.5894 119451215 pimF Organic Remediation Aromatics Aromatic carboxylic acid marine gamma proteobacterium HTCC2143 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 3648.0105 3481.9032 3844.8361 3721.234 2123.8282 3748.4346 2983.4062 3101.9498 2931.0821 2942.3818 5636.1239 4108.2381 92910784 ophC Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium sp. JLS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 1104.6856 1324.767 1107.1818 1639.8129 760.2571 1039.5517 2260.5869 1343.3443 1203.8477 1199.9578 747.3419 240867959 iro virulence Iron oxidation Ralstonia pickettii 12D superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 8381.7132 4651.6698 6433.7224 8589.1837 5077.3257 5546.2302 6647.5475 7854.7408 6038.0165 6560.3784 5895.0611 6935.2343 158138777 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 756.0771 634.0058 917.0926 619.8815 1077.3756 1096.251 628.0294 796.4853 818.3844 871.0501 1498.3184 826.7972 209504640 ophC Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 854.4419 386.6228 723.5854 1128.0281 1092.1201 431.8248 909.6971 262195769 grpE Stress Heat shock Haliangium ochraceum DSM 14365 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Haliangiaceae;genus:Haliangium;species:Haliangium ochraceum; 2499.9386 4475.4785 2686.8533 2015.0292 3905.6391 2743.6114 3524.9271 2198.85 2773.9496 2146.0799 2590.7892 2321.1651 170027465 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 555.327 534.8204 563.1044 411.6779 589.9743 352.8262 53687606 ureC Nitrogen Ammonification Nostoc punctiforme PCC 73102 superkingdom:Bacteria;phylum:Cyanobacteria;order:Nostocales;family:Nostocaceae;genus:Nostoc;species:Nostoc punctiforme; 1118.7223 856.9496 1037.9884 911.0087 1211.3816 1197.879 731.9454 723.0029 1004.4445 1596.9154 1135.1159 224472738 phenol_oxidase Carbon cycling Carbon degradation Lignin Laccaria bicolor superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Tricholomataceae;genus:Laccaria; 695.5915 391.1638 473.2229 110171816 cap virulence capsule Ruminococcus flavefaciens superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Ruminococcus; 1233.8442 974.0282 886.6704 677.8265 29830060 PobA Organic Remediation Aromatics Aromatic carboxylic acid Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 1842.2166 2447.9975 2388.6781 1851.8232 3304.211 2277.9531 2193.5664 1767.282 2132.2908 1908.1001 1739.3213 2135.4829 52784548 bglH Stress Glucose limitation Bacillus licheniformis ATCC 14580 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus licheniformis; 1720.8653 979.8515 2204.8694 1522.6717 16290.4344 1100.1845 763.8025 1082.4246 871.5734 890.2675 950.9418 681.5639 116068046 pstB Stress Phosphate limitation Synechococcus sp. RS9916 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 2318.607 1866.79 2304.7775 1889.5296 1683.9796 2034.1599 1389.0355 1567.9794 1736.5419 1812.419 3072.3865 1772.2557 254470730 narJ Stress Oxygen limitation Pseudovibrio sp. JE062 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pseudovibrio; 54004.9811 39632.5749 65690.181 36909.4327 14736.8489 53160.0912 44180.6328 56462.8808 54539.9161 49171.8775 23199.3103 66885.7838 111224847 AceB Carbon cycling Carbon degradation Others Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 3746.2946 1615.5904 2296.3227 3245.7244 2353.8453 2050.6566 1951.6822 9573.3059 1821.8703 1575.5079 2901.091 2159.0685 148717971 coat_Aureusvirus soil_borne_pathogen structural Maize white line mosaic virus superkingdom:Viruses;family:Tombusviridae;genus:Aureusvirus; 2479.817 2047.0278 3585.1609 1150.0168 1999.6622 3265.7503 2567.7137 3051.8623 3181.1381 2992.4075 1813.7615 3323.709 227485802 ahpC Stress Oxygen stress Anaerococcus lactolyticus ATCC 51172 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XI. Incertae Sedis;genus:Anaerococcus;species:Anaerococcus lactolyticus; 1079.1105 464.1997 295.7632 525.2719 739.2323 568.9629 1192.1811 837.5793 463.1617 477.2652 608.8074 134292982 phtA Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia vietnamiensis G4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia vietnamiensis; 2074.2825 2111.0846 1747.5008 1985.8535 2374.2808 4139.5363 1727.2192 2429.2925 1864.4732 2055.3209 1312.8125 157804813 APS_AprA Sulphur adenylylsulfate reductase Chromatium okenii superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Chromatiaceae;genus:Chromatium; 2057.9623 2893.7769 2750.0128 2238.7303 3505.849 2990.3303 3637.9891 2269.9021 3622.2076 3221.9729 2049.7552 2560.9938 121534013 cda Carbon cycling Carbon degradation Starch Thermosinus carboxydivorans Nor1 superkingdom:Bacteria;phylum:Firmicutes;class:Negativicutes;order:Selenomonadales;family:Veillonellaceae;genus:Thermosinus;species:Thermosinus carboxydivorans; 794.1174 508.5184 464.4363 957.6351 888.0836 618.4861 417.4908 599.8154 731.7598 1029.3101 556.9703 78516023 pheA Organic Remediation Aromatics Other aromatics Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 6942.0127 7221.5629 5984.5831 7146.5192 7885.5742 7209.529 5973.8896 4407.9645 8166.5567 6958.306 6079.7863 6591.9255 117675817 gyrB other category gyrB Okibacterium fritillariae superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Okibacterium; 571.6953 1047.7779 1093.6138 882.9088 709.8639 85083355 endoglucanase Carbon cycling Carbon degradation Cellulose Neurospora crassa OR74A superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Sordariaceae;genus:Neurospora;species:Neurospora crassa; 7316.0127 5595.7211 6031.4511 7733.7616 6767.3753 5691.9668 4751.8486 9099.6572 6404.8094 5204.6235 21813.5952 5521.5942 192897590 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 4535.4689 1809.532 2737.9305 3989.9109 2874.0381 2564.6893 3339.1094 3233.1359 2579.82 3915.9064 2252.9793 2337.1084 212171528 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 537.2278 662.9952 667.0421 846.0124 698.4287 814.26 499.2891 666.7618 658.7647 67738337 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Burkholderia pseudomallei 668 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia pseudomallei; 1267.9551 3103.2072 2033.5506 1716.4094 1377.6757 2934.1694 2425.242 2178.7691 2755.1831 3085.6473 897.335 2507.5543 126708209 exaA Organic Remediation Chlorinated solvents Sagittula stellata E-37 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 1239.3981 595.9438 991.6365 1293.4299 964.6043 860.6446 979.8786 1093.2095 855.428 890.3792 1194.2871 863.7647 115437134 scytalone_dehydratase_Fungi soil_borne_pathogen fungi virulence Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 1940.2282 730.1375 1136.3626 1622.3348 1236.5008 932.4647 961.5836 946.0941 869.4883 1087.8467 2223.5011 1004.8921 217507504 fnr Stress Oxygen stress Thauera sp. MZ1T superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Thauera; 1345.9968 1233.7724 1280.8996 1594.6385 931.2464 897.3962 666.9007 1244.8752 1247.3817 906.7882 212686596 ppk Phosphorus Phosphorus utilization Providencia alcalifaciens DSM 30120 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia alcalifaciens; 1225.4688 3099.7235 1248.2875 1415.6803 786.6501 1696.1029 2005.5808 955.1481 877.8405 1332.3138 1180.7372 1174.9123 108767070 catB Organic Remediation Aromatics BTEX and related aromatics Rubrobacter xylanophilus DSM 9941 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Rubrobacterales;family:Rubrobacteraceae;genus:Rubrobacter;species:Rubrobacter xylanophilus; 991.3035 882.8877 814.2348 528.8505 648.8531 409.161 903.6572 81176593 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1903.5714 1469.2548 959.5334 1714.9301 2133.6872 907.8467 2386.6906 1594.3264 1326.08 1256.0469 1257.4958 1782.1293 66876305 phtA Organic Remediation Aromatics Aromatic carboxylic acid Rhodococcus sp. TFB superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 1421.7952 1069.7503 1605.5954 682.3412 1316.7366 1165.1572 1278.9011 1642.2088 1383.1658 1527.3255 223470353 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 4829.7437 4140.6806 2021.0176 4392.8647 3658.8112 3577.9329 2478.6244 2533.1822 3890.3137 2888.0458 6049.6114 3128.3801 114707536 BchY other category chlorophyllide reductase Fulvimarina pelagi HTCC2506 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Fulvimarina;species:Fulvimarina pelagi; 933.088 2123.4067 1506.4361 1111.6637 783.1791 1326.8471 1081.9292 1621.4278 1115.4963 1375.5 1636.2231 82949451 gyrB other category gyrB Nocardia sp. Hou_blue superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Smaragdicoccus; 3334.7827 1618.4957 1707.8807 1803.7449 1702.0923 991.4291 1797.1698 995.7627 1717.0314 2926.9174 2020.4542 226356151 nplT Carbon cycling Carbon degradation Starch Deinococcus deserti VCD115 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus deserti; 657.3804 1768.5775 1604.2141 809.8649 895.135 1654.4047 1575.8831 1671.8784 1860.5448 1761.5744 1609.1199 255950816 Sulfhydryl_oxidase Fungi function carbon degradation Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 1580.9814 3187.1807 4186.0197 2489.2101 1754.0983 1777.9287 1683.4471 4021.0393 2657.7514 2134.0425 4167.3798 3455.8966 222081546 dnaK Stress Heat shock Agrobacterium radiobacter K84 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 4534.166 4243.118 5758.3778 4081.2049 4199.3665 5061.0732 3577.2199 4590.4848 3948.5235 4009.3807 6086.7133 5504.9552 145320698 vip virulence virulence protein Enterobacter sp. 638 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter; 722.3621 1337.5478 1139.7212 804.4419 743.9709 1379.6876 1234.0015 843.2926 1419.4345 1640.8093 675.0432 1391.4439 91777081 CysJ Sulphur sulfite reductase Methylobacillus flagellatus KT superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Methylophilales;family:Methylophilaceae;genus:Methylobacillus;species:Methylobacillus flagellatus; 1670.3062 1392.8973 1749.3473 1829.2405 1428.9802 1508.4762 2650.9875 934.0867 1489.4175 1277.8662 1138.9823 1163.487 3157622 nifH Nitrogen Nitrogen fixation unidentified nitrogen-fixing bacteria superkingdom:Bacteria; 17441.5893 1363.5554 1326.7571 2406.9154 2317.462 1977.6699 1876.6554 2416.9448 1223.7907 1295.6431 1874.8801 1788.8993 33414625 helicase_family_4 Bacteria phage REPLICATION Bacteriophage Aeh1 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 2719.8656 2898.2305 4564.0172 1751.3518 1737.5087 3801.0807 2644.7821 3772.9502 3903.0926 3490.9671 1486.5944 4215.3916 212540166 ureC Nitrogen Ammonification Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 1164.2108 990.1971 1332.5226 1242.8526 2444.3973 1637.2723 239800037 pilin virulence pilin Variovorax paradoxus S110 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Variovorax;species:Variovorax paradoxus; 1553.3377 990.4406 1549.7201 2039.7395 761.5274 1643.711 1041.8064 1018.5866 1108.9671 1458.7961 1091.9182 854.9211 68196062 SMR_antibiotics Antibiotic resistance transporter Enterococcus faecium DO superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Enterococcaceae;genus:Enterococcus;species:Enterococcus faecium; 432.509 618.2355 593.4864 801.4954 497.8912 351.2537 565.1005 435.2041 146190810 SilA Metal Resistance Silver Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2344.8896 2732.1822 2253.3876 2129.0885 3404.2794 2325.972 2719.0978 1205.2708 2594.9404 3098.9801 1308.9564 1844.2911 260905595 AceB Carbon cycling Carbon degradation Others Brevibacterium linens BL2 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Brevibacteriaceae;genus:Brevibacterium;species:Brevibacterium linens; 2663.3828 2267.9455 1652.0345 2523.9059 1450.9922 2771.5796 5933.457 1906.5198 3116.836 2125.1205 2197.6506 1881.9497 119962147 dnaK Stress Heat shock Arthrobacter aurescens TC1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter aurescens; 1515.2572 2303.2551 1836.2401 1098.5946 1191.1897 2176.4091 2278.274 2616.98 2340.2946 2102.6313 2554.0108 127514182 cytochrome Energy process Energy process Shewanella loihica PV-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella loihica; 1100.9245 708.2196 656.5554 789.0546 66846637 pectinase Carbon cycling Carbon degradation Pectin Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 1228.2493 825.845 661.8908 1199.2665 661.8307 825.0994 1178.7625 1153.9553 517.8999 816.704 70999544 endochitinase Carbon cycling Carbon degradation Chitin Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 1357.4008 789.4905 1170.574 1238.585 722.7276 1105.6527 731.3668 742.9149 951.9676 259348848 glnA Stress Nitrogen limitation Silicibacter sp. TrichCH4B superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 1116.8015 1668.4974 1520.5685 848.8356 1297.0218 967.6419 1247.9608 2562.1114 1038.8987 1491.6255 2179.5841 1328.3163 218267437 atzA Organic Remediation Herbicides related compound Clostridium hylemonae DSM 15053 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium hylemonae; 1071.7093 1735.3662 1593.6003 1047.8538 1448.4417 1087.2858 1585.8534 1638.5394 1257.5321 1459.6339 13093906 catB Organic Remediation Aromatics BTEX and related aromatics Mycobacterium leprae superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 947.4605 1395.399 895.9825 1555.9712 836.8193 2356.5583 1246.2265 823.883 584.5567 9295226 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 359.9608 413.1264 2348.4399 402.4053 303.072 369.7782 380.8609 476.4881 2286.4516 571.4251 429.7387 31747606 nitrogen_fixation_genes Bioleaching Nitrogen Leptospirillum ferrooxidans 2007.0673 1547.4432 2132.7971 930.5824 1025.7678 2004.6511 1552.9312 1911.7972 1804.3387 1691.4044 1946.9312 118424479 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2398.4844 7024.8815 6596.1575 10245.5705 5925.7839 9599.9775 2928.1541 5412.0139 3761.9774 5636.0421 10962.0422 6520.8057 295661957 tre_fun soil_benifit Paracoccidioides brasiliensis Pb01 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Paracoccidioides;species:Paracoccidioides brasiliensis; 1404.7631 1205.9809 1308.9608 1447.4448 1205.58 1551.1914 1061.5122 921.6677 1318.2402 1425.107 1993.5376 1593.1721 148655157 srt virulence surface protein Roseiflexus sp. RS-1 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus; 1290.7363 2177.0273 1934.464 1702.616 1084.22 2246.0755 2590.4477 1459.0974 2522.251 2346.7969 1245.1471 2163.9984 239911413 ABC_antibiotic_transporter Antibiotic resistance transporter Thermococcus gammatolerans EJ3 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Thermococcus;species:Thermococcus gammatolerans; 644.7368 640.5045 552.953 1347.7954 1113.9865 656.8311 831.3578 1319.8477 922.7842 702.7368 18312473 sped_ara soil_benifit Pyrobaculum aerophilum str. IM2 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Thermoproteales;family:Thermoproteaceae;genus:Pyrobaculum;species:Pyrobaculum aerophilum; 1827.961 1562.3902 1616.1365 1748.3247 2722.3618 1789.5647 1386.3261 1715.587 1586.6434 1398.8881 2390.2078 1762.0663 3413304 exochitinase Carbon cycling Carbon degradation Chitin Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 776.8032 814.708 729.5041 840.124 1119.4632 1484.8898 746.9789 990.6139 792.8291 653.0367 438.5685 218675778 APS_AprA Sulphur adenylylsulfate reductase gamma proteobacterium symbiont of Robbea sp. 3 SB-2008 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 2135.4129 851.1899 1884.4773 1739.2158 564.3306 1023.4887 763.8025 1109.4776 1123.668 1219.4098 858.423 592.6999 91799470 glucoamylase Carbon cycling Carbon degradation Starch Nitrobacter hamburgensis X14 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter hamburgensis; 983.3516 2522.6819 1660.2057 1462.7998 1727.4412 1315.8692 1476.0577 2381.4188 1172.3723 1771.1552 1590.7651 1427.203 90954571 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 9865.4045 5795.7092 7691.1843 9379.6541 6186.8946 7300.1791 6787.7366 8438.7357 6839.6147 6776.5832 7077.7683 6712.2621 30180381 CueO Metal Resistance Copper Nitrosomonas europaea ATCC 19718 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas;species:Nitrosomonas europaea; 1036.2883 1323.1869 2244.9693 794.9633 703.6452 1442.6985 1297.6727 1730.5236 1857.7141 1452.4983 1788.4187 147677280 sped_bac soil_benifit Pelotomaculum thermopropionicum SI superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Pelotomaculum;species:Pelotomaculum thermopropionicum; 1762.3846 2879.397 2327.728 1825.0582 2656.5912 2218.8999 2012.5776 2365.659 2260.0567 2243.8534 2501.5859 2240.6112 44662845 sigma_70 Stress Sigma factors Meiothermus ruber DSM 1279 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Meiothermus;species:Meiothermus ruber; 2014.9655 3226.861 2611.0444 1831.7974 5148.7273 2823.0143 3597.6713 2237.7774 2917.2082 2091.61 2890.5442 2457.6922 118471089 nmoA Organic Remediation Aromatics Nitoaromatics Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 831.9562 1244.0047 1066.9947 796.1823 1950.576 1108.3656 954.2771 902.8627 820.0851 1286.5872 1116.9892 4883833 bco Organic Remediation Aromatics Aromatic carboxylic acid Clostridium symbiosum superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium; 1135.8888 662.5619 1038.2356 725.1196 1004.8894 1467.5462 735.2903 815.3406 116222759 sigma_24 Stress Sigma factors Candidatus Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 1033.6421 692.2138 877.6324 1379.8476 684.3812 853.3609 784.77 507.2537 747.3725 974.6301 1016.6491 1127.1649 254394851 katE Stress Oxygen stress Streptomyces pristinaespiralis ATCC 25486 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces pristinaespiralis; 1182.3377 2917.2551 2337.4259 1459.4028 2837.1618 1210.2628 1281.3277 2338.025 1651.6794 2284.1866 2563.9805 88778168 pstA Stress Phosphate limitation Reinekea sp. MED297 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;genus:Reinekea;species:Reinekea blandensis; 395.6103 1111.8899 476.7367 880.0258 763.9373 763.0454 646.7106 782.4125 808.5738 569.453 146274109 pstB Stress Phosphate limitation Pelotomaculum thermopropionicum SI superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Pelotomaculum;species:Pelotomaculum thermopropionicum; 1956.4544 1212.6962 1418.0796 1701.26 764.5609 707.2829 901.9843 915.2162 966.92 1325.6586 1400.0404 70730631 pimF Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 2367.3215 1667.6564 2478.7787 2531.0971 2877.0147 2280.2506 1607.2542 2972.882 2085.1946 2086.6744 3187.5844 2262.171 158509264 pbrA Metal Resistance Lead Desulfococcus oleovorans Hxd3 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfococcus;species:Desulfococcus oleovorans; 1313.8667 1095.503 1010.3052 1070.5301 1503.6618 1116.0382 766.2686 865.4434 1269.2215 724.9482 886.0753 614.9325 268317698 sigma_24 Stress Sigma factors Rhodothermus marinus DSM 4252 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Rhodothermaceae;genus:Rhodothermus;species:Rhodothermus marinus; 1145.3854 974.1811 567.0109 1771.1311 4570.7821 1107.2589 723.9549 773.6446 1009.2405 932.5325 2546.656 843.6194 53828149 dsrA Sulphur sulfite reductase uncultured Desulfovibrio sp. superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio; 4599.8365 1320.2944 1951.8387 4513.9508 2596.4326 1834.3887 2531.1007 3231.284 2149.1356 2396.5211 2225.5912 2463.6108 177839905 amyA Carbon cycling Carbon degradation Starch Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 1010.3908 1256.5051 1250.7156 725.9825 845.7455 1436.7908 1294.5758 1757.0804 1437.5603 1455.2564 1294.6446 184208503 ara Carbon cycling Carbon degradation Hemicellulose bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3;genus:Pedosphaera;species:Pedosphaera parvula; 554.2332 287.957 630.9991 414.8974 634.5215 673.2037 559.8634 145590808 CopA Metal Resistance Copper Pyrobaculum arsenaticum DSM 13514 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Thermoproteales;family:Thermoproteaceae;genus:Pyrobaculum;species:Pyrobaculum arsenaticum; 1510.9185 1048.1899 10079.7348 1701.5476 1376.14 1130.6505 795.6553 1194.5343 937.3433 1177.9264 2068.9748 1519.6629 118441024 phoB Stress Phosphate limitation Methylophilales bacterium HTCC2181 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Methylophilales; 605.2459 612.3478 705.1229 438.9754 901.7874 62512284 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 3908.906 2504.8041 3641.4432 4190.4427 3453.0433 3226.2956 3884.0714 10510.8661 2413.8343 3503.2614 4104.8197 4154.8731 199652761 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 1144.2705 775.9579 551.0628 1246.6528 1121.3997 782.3036 655.6038 587.5172 715.9669 721.7881 1199.8367 581.6179 164606904 phdI Organic Remediation Aromatics Polycyclic aromatics Arthrobacter phenanthrenovorans superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 4833.6457 4004.2875 2935.1295 4002.7483 3893.4876 4286.9619 4300.7986 4149.3422 3485.0035 3728.377 4628.3799 2670.3129 154940270 amoA Nitrogen Nitrification Archaea superkingdom:Archaea;phylum:Crenarchaeota; 896.4581 520.9983 451.9034 387.291 283.9069 870.9639 650.7348 91691552 ahpF Stress Oxygen stress Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 2212.9172 2596.3741 2063.7239 1478.1044 1843.1279 950.9843 599.8835 963.0281 1106.0958 254431180 clpC Stress Protein stress Cyanobium sp. PCC 7001 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanobium; 4524.7902 5594.071 6981.6429 4059.7683 2939.7708 4839.2864 5010.9754 7615.6815 5846.9972 5333.9226 4553.0468 6856.6578 335421035 sir Sulphur sulfite reductase Salinisphaera shabanensis E1L3A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Salinisphaerales;family:Salinisphaeraceae;genus:Salinisphaera;species:Salinisphaera shabanensis; 1567.4551 647.2709 1195.5337 625.5272 922.8028 1116.5828 922.852 1099.002 690.1054 160705492 katE Stress Oxygen stress Phaeosphaeria nodorum SN15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Phaeosphaeriaceae;genus:Phaeosphaeria;species:Phaeosphaeria nodorum; 1884.6588 885.0979 1087.7025 1934.2731 1359.1078 1160.2938 962.1294 1334.9602 1628.1622 269838361 sigma_24 Stress Sigma factors Sphaerobacter thermophilus DSM 20745 superkingdom:Bacteria;phylum:Chloroflexi;class:Thermomicrobia;order:Sphaerobacterales;family:Sphaerobacteraceae;genus:Sphaerobacter;species:Sphaerobacter thermophilus; 2202.4065 2730.2072 2412.028 2164.702 2946.0748 2634.5651 2893.5523 2308.1274 3123.7263 3408.4248 4947.9632 3047.5995 161385502 sped_bac soil_benifit Phaeobacter gallaeciensis 2.10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 2538.6102 2485.9578 2903.2736 1440.4728 1864.5566 2236.1445 1383.0571 4456.9021 2679.0806 2447.4959 3987.9881 1919.0408 157285638 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 483.5252 515.704 709.1894 468.7715 637.299 613.7956 507.5442 622.5407 372.0767 239803879 hrcA Stress Heat shock Variovorax paradoxus S110 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Variovorax;species:Variovorax paradoxus; 2824.3286 3352.579 9127.8607 3158.252 4111.6407 3454.8726 3126.7841 3465.7679 3269.7166 3871.9887 2888.8384 4287.9258 146406801 nmoA Organic Remediation Aromatics Nitoaromatics Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2318.1996 844.5383 1734.0227 2145.2926 1263.0843 1120.3606 1355.7044 824.3494 1262.966 1424.0796 1931.8184 1761.5582 197758060 pcpB Organic Remediation Herbicides related compound Streptomyces sp. Mg1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 3831.7643 2333.0663 3056.9268 2735.3711 2284.406 2766.1655 2442.5391 2750.5689 3220.2262 3328.3502 2773.5681 2722.6784 211589156 alkJ Organic Remediation Other Hydrocarbons Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 2300.254 2712.1764 3018.499 2690.1802 2890.2129 3459.5239 2106.5913 2813.4278 2558.6914 1566.284 4284.4927 91788126 pstB Stress Phosphate limitation Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 1856.5181 1694.505 2252.6461 1810.032 2190.2245 2358.8609 1862.4553 1965.6249 1636.7687 1540.8695 2925.9805 2430.3785 50547497 ppx Phosphorus Phosphorus utilization Yarrowia lipolytica superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Dipodascaceae;genus:Yarrowia;species:Yarrowia lipolytica; 2267.2778 1648.9631 1182.7435 1608.0346 947.1999 1449.5472 1097.5977 1413.8065 968.6661 46578818 dsrA Sulphur sulfite reductase Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 995.481 1385.1498 1072.0544 1330.8652 1210.2251 1648.3474 1227.0276 992.6351 1283.8409 1927.6977 1067.1248 1396.882 224539027 sigma_24 Stress Sigma factors Bacteroides cellulosilyticus DSM 14838 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides cellulosilyticus; 2301.7316 2838.2768 2815.1788 2228.7517 2468.0765 2596.5013 2241.6839 2187.0242 2112.7792 2870.6262 4464.5401 2677.8217 114226933 ZntA Metal Resistance Zinc Alkalilimnicola ehrlichei MLHE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Alkalilimnicola;species:Alkalilimnicola ehrlichii; 623.8263 592.5405 532.9854 493.5682 198268323 hdnO Organic Remediation Aromatics Heterocyclic aromatics Octadecabacter antarcticus 238 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Octadecabacter;species:Octadecabacter antarcticus; 567.9847 1375.3677 902.7567 1022.1915 1402.152 1940.9231 766.9146 1086.8691 1084.0724 814.3619 898.9745 229817372 sigma_24 Stress Sigma factors Bifidobacterium angulatum DSM 20098 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium angulatum; 3522.9289 5849.5656 6112.6978 4243.3357 5612.4586 4135.3014 6433.4553 4333.7593 5306.906 4355.3285 5561.4555 4185.7365 154705969 phoB Stress Phosphate limitation Coxiella burnetii Dugway 5J108-111 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Legionellales;family:Coxiellaceae;genus:Coxiella;species:Coxiella burnetii; 1104.7796 534.1952 768.6092 605.628 926.4298 705.1451 671.7848 1007.2554 810.3596 94556491 pilin virulence pilin Deinococcus geothermalis DSM 11300 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus geothermalis; 971.8401 826.8772 361.1276 594.0105 627.3053 188575037 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Xanthomonas oryzae pv. oryzae PXO99A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas oryzae; 503.738 874.2157 635.55 601.9651 578.8715 567.307 529.2134 1187.756 670.7924 669.0937 936.1427 822.1008 110824271 pcpE Organic Remediation Herbicides related compound Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1613.4969 1399.706 1860.0364 2305.8961 1541.6378 1188.0976 1042.8043 947.2683 1353.6996 1100.1074 2231.4292 989.3437 111017396 CDH Carbon cycling Carbon degradation Cellulose Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 885.2287 1023.1762 651.6016 623.2912 1565.9439 651.6507 859.8197 1239.2959 983.4731 1070.3824 787.7507 841.2025 56312526 bbsG Organic Remediation Aromatics BTEX and related aromatics Azoarcus sp. EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 858.7805 2128.2616 1906.6645 1412.8449 1433.8211 2271.232 2220.5673 1382.5016 2228.989 2913.5835 2149.964 110679874 phoB Stress Phosphate limitation Roseobacter denitrificans OCh 114 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter denitrificans; 4144.4413 3232.6334 2284.9238 3118.0361 5116.3255 1899.3898 5203.6752 2548.6756 1777.517 1998.5037 3451.2304 1593.1141 86747905 pstB Stress Phosphate limitation Rhodopseudomonas palustris HaA2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 3897.2736 4047.8001 4393.4254 3574.917 2319.6044 3980.3468 3359.6411 4378.7932 3570.0146 3653.9973 4277.7248 4338.4059 154161980 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 2175.8978 1535.3632 779.5781 1742.4895 1404.8258 959.401 1013.9796 1095.8724 907.9297 961.9896 1974.7744 940.0205 189496744 amyA Carbon cycling Carbon degradation Starch Chlorobium phaeobacteroides BS1 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium phaeobacteroides; 1353.1293 665.9259 629.0363 1271.7741 799.5426 924.4631 1596.9769 1527.7892 703.8637 978.9626 630.0211 1081.6284 78061482 atzB Organic Remediation Herbicides related compound Burkholderia sp. 383 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 742.2956 1767.7492 1386.6307 935.5683 1818.2763 1041.7802 1074.7374 1593.588 1030.162 1225.1047 628.6758 1114.3938 29160313 exoglucanase_fungi Fungi function carbon degradation Verticillium tenerum superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;genus:Verticillium; 1504.2292 2024.5882 1708.8403 1571.8595 1386.2833 1950.5841 1568.7486 2124.0698 1948.3196 2227.3382 1257.2075 1807.1221 213925440 NirB Nitrogen Assimilatory N reduction Pseudomonas syringae pv. tomato T1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 3518.5768 4854.7224 3897.0474 2492.1551 4143.6823 3025.0588 3055.3819 3226.0549 3271.4873 3163.176 3593.2638 2604.1339 108766795 nitA Organic Remediation Aromatics Other aromatics Rubrobacter xylanophilus DSM 9941 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Rubrobacterales;family:Rubrobacteraceae;genus:Rubrobacter;species:Rubrobacter xylanophilus; 1158.3745 1069.0622 1156.7033 1159.6599 989.8071 1120.9739 970.339 873.1344 1063.0348 1373.3905 1247.474 257813519 glnA Stress Nitrogen limitation "Enterococcus faecium 1,230,933" superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Enterococcaceae;genus:Enterococcus;species:Enterococcus faecium; 448.3458 1004.6103 835.1626 683.2325 969.0029 772.0585 775.2612 863.7657 588.6906 840.0632 665.073 803.0677 66048001 endochitinase Carbon cycling Carbon degradation Chitin Pseudomonas syringae pv. syringae B728a superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae; 2052.1058 1201.572 1673.582 2010.9884 1763.9762 1263.4922 1397.2343 1404.0109 1145.6379 1646.292 2461.657 1821.0879 260423532 katE Stress Oxygen stress Citreicella sp. SE45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Citreicella; 528.9132 669.4665 622.4657 694.8664 637.1153 480.0122 516.3363 85704480 ureC Nitrogen Ammonification Roseovarius sp. 217 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 1848.002 1992.5279 2626.1073 1553.4089 1542.908 1363.6695 1513.5195 4082.4443 1643.2572 1787.4247 3138.2619 2300.2782 78610846 srt virulence surface protein Lactobacillus sakei subsp. sakei 23K superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus sakei; 698.5063 1179.1196 1032.9868 622.2786 1128.8887 766.2405 799.7846 862.4415 787.6661 703.5868 1030.9198 828.9807 14523471 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Sinorhizobium meliloti 1021 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium meliloti; 1281.7635 812.5056 1636.201 872.6396 1058.5758 1664.1196 1123.9942 1106.048 1343.8751 56698515 bclA Organic Remediation Aromatics Aromatic carboxylic acid Silicibacter pomeroyi DSS-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria pomeroyi; 1052.8638 2453.5026 1110.5259 1652.8255 1374.4715 2165.4312 3512.4934 1269.4719 1917.6596 1960.5047 880.3335 1616.9291 194347816 B_lactamase_C Antibiotic resistance Beta-lactamases Stenotrophomonas maltophilia R551-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 1100.1857 1660.3677 1136.4099 1228.9127 1489.1767 1376.1131 1222.1183 662.3858 1168.0238 1310.7402 116617179 gyrB other category gyrB Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Leuconostocaceae;genus:Leuconostoc;species:Leuconostoc mesenteroides; 1325.9558 1244.7693 1368.122 1452.6499 690.9032 1570.5149 1991.4724 1330.6711 1228.0076 1788.0166 1127.7628 1375.9539 156742214 CadA Metal Resistance Cadmium Roseiflexus castenholzii DSM 13941 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus;species:Roseiflexus castenholzii; 2442.3482 3378.1235 6355.2382 3826.157 4977.0021 2434.4321 3770.2049 2714.7705 2724.9636 1768.782 3027.9166 3880.4596 156110458 mannanase Carbon cycling Carbon degradation Hemicellulose Bacteroides ovatus ATCC 8483 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides ovatus; 1344.761 2158.8055 1772.4214 2002.1124 2194.0543 2324.581 1664.1236 1478.0164 2177.99 2383.1213 1517.9225 2101.1455 46560120 serine_protease_inhibitor_Oomycetes soil_borne_pathogen oomycete virulence Phytophthora infestans superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 7159.9249 10546.0955 6610.4207 6736.0592 6680.0132 8307.0364 12207.8436 5313.0252 9128.456 6704.9058 8094.97 4585.2724 118003262 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 2058.9025 1595.215 2754.4474 697.1492 1144.1132 1623.52 1661.4969 2716.223 1829.7101 2168.9377 969.1525 1934.7781 60476302 dsrB Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 475.0762 845.3666 478.3506 517.0671 529.4637 1281.213 734.3955 518.8602 439.6671 56567522 endochitinase Carbon cycling Carbon degradation Chitin Torrubiella confragosa superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Cordycipitaceae;genus:Torrubiella; 1125.2504 516.5172 1042.2833 219883278 merB Metal Resistance Mercury Arthrobacter chlorophenolicus A6 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter chlorophenolicus; 3329.7322 1567.895 2487.9532 3614.6398 2010.3364 2321.844 2261.8142 3155.0149 2488.737 2995.9584 1670.767 867.7196 120589311 avrBs1 soil_borne_pathogen secretion system type III Acidovorax citrulli AAC00-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax citrulli; 1350.1339 1186.2427 1057.8639 1461.9505 1742.9691 1007.0218 1426.0705 813.5282 869.0107 1017.9559 1553.3348 1249.8772 163782567 CueO Metal Resistance Copper Hydrogenivirga sp. 128-5-R1-1 superkingdom:Bacteria;phylum:Aquificae;class:Aquificae;order:Aquificales;family:Aquificaceae;genus:Hydrogenivirga; 2109.7572 1379.7639 1813.5537 2242.0657 1671.7381 2142.563 2152.6864 2500.2101 1723.6465 1810.3606 1683.5481 1485.0436 119495437 chitin_synthase Fungi function major biomolecule Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 9355.8503 19020.4172 19217.5796 10555.1894 9756.7287 19977.9513 15721.289 18542.2567 20593.9565 14533.3723 4849.6305 21878.6157 118725530 endoglucanase Carbon cycling Carbon degradation Cellulose Clostridium cellulolyticum H10 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium cellulolyticum; 517.6001 384.3225 1482.3458 77543338 arhA Organic Remediation Aromatics Heterocyclic aromatics Sphingomonas sp. FCIB superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 2649.027 4773.6065 3440.1622 2874.816 6933.2304 5280.4371 3247.2215 4873.2891 3451.8565 4079.8634 3119.5387 5050.0391 238491150 iro virulence Iron oxidation Aspergillus flavus NRRL3357 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus flavus; 2435.7053 657.0444 1218.0309 2107.8436 896.6518 907.6223 1089.1669 700.5711 736.5506 981.6537 2721.435 872.32 70993186 endopolygalacturonase_fungi Fungi function carbon degradation Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 990.1887 715.9805 896.0647 788.5271 739.6931 1385.9476 1078.2849 683.9324 948.5676 119964148 gyrB other category gyrB Arthrobacter aurescens TC1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter aurescens; 1753.7476 1944.8899 1788.4876 1723.0596 1328.1155 1600.4275 1385.3512 2576.3905 1564.161 1569.9414 3010.7633 2332.5767 89350104 pcaG Organic Remediation Aromatics Other aromatics Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 13880.5196 18698.1325 13785.0317 17958.8934 16677.509 23845.5127 18037.2083 18052.3242 16996.2952 16143.2245 21833.8719 15273.2828 78609630 fnr Stress Oxygen stress Lactobacillus sakei subsp. sakei 23K superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus sakei; 744.0284 431.3482 665.4141 578.2684 697.0284 490.0841 627.7656 716.9966 447.9482 448.9806 865.9428 561.8865 52631724 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 5568.1036 3761.0289 5288.0691 2387.4375 2484.1732 3851.7078 3710.848 5220.0886 4199.5114 4658.2966 1669.9262 5267.3444 81300845 phtA Organic Remediation Aromatics Aromatic carboxylic acid Synechococcus elongatus PCC 7942 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus;species:Synechococcus elongatus; 1312.9802 662.8988 796.7439 591.8209 551.8341 702.0464 1152.2994 965.1643 811.9526 67537640 vacuolar_iron_transport Fungi function iron Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 3701.471 5991.575 4680.8274 4203.8115 8413.1233 4327.4673 4232.9613 4072.2041 5380.7485 5650.0448 2320.9929 4593.8414 336300524 CysJ Sulphur sulfite reductase Paenibacillus mucilaginosus KNP414 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus;species:Paenibacillus mucilaginosus; 986.7366 549.2296 760.3133 943.1842 946.2245 1252.5144 568.0777 871.7016 910.6798 978.45 602.1889 254820030 CDH Carbon cycling Carbon degradation Cellulose Mycobacterium intracellulare ATCC 13950 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium intracellulare; 500.9336 492.346 363.1254 601.5218 603.4848 493.3672 119718511 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 2210.58 1640.0178 2314.7152 2263.064 708.0426 1625.24 1245.0817 1797.4603 1444.0487 1061.3599 1403.7095 1093.2185 227845044 SMR_antibiotics Antibiotic resistance transporter Halogeometricum borinquense DSM 11551 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halogeometricum;species:Halogeometricum borinquense; 923.5698 909.2403 998.8185 1347.0406 685.5399 1014.1704 62731974 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 899.6147 571.7202 911.6257 694.218 892.6149 780.8528 663.4953 718.6791 687.7299 681.4549 1380.6219 911.3198 118619890 CopA Metal Resistance Copper Mycobacterium ulcerans Agy99 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium ulcerans; 1053.8175 670.9973 745.788 473.9164 611.1452 666.086 389.6208 480.3695 694.5112 114564663 pimF Organic Remediation Aromatics Aromatic carboxylic acid Shewanella frigidimarina NCIMB 400 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella frigidimarina; 1479.1646 1697.0917 996.42 2213.3557 4494.6423 1215.3629 2523.4042 1635.4325 1387.5165 915.8164 1975.4951 1545.0403 197330419 amyA Carbon cycling Carbon degradation Starch Streptomyces sp. Mg1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 1849.634 2443.7545 1653.343 2184.6046 1298.9842 2633.077 1834.8331 1333.3946 1853.2351 2022.7744 1173.678 2296.6598 118053356 CadA Metal Resistance Cadmium Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 3451.8318 4221.7105 4944.7482 2975.4038 2946.3308 5438.0315 4104.9077 4297.5251 5297.4353 4589.5001 1939.8906 4938.9627 152030471 AceB Carbon cycling Carbon degradation Others Anaeromyxobacter sp. Fw109-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter; 5486.9188 7724.5752 5329.7538 5544.0047 8180.8627 5964.9565 5834.0675 5745.8498 7198.1457 6996.7856 2402.7246 5301.4922 171096323 cap virulence capsule Burkholderia ambifaria MEX-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ambifaria; 9627.72 15731.0413 11292.7603 11394.5189 14663.5892 13385.06 15005.1339 21273.9973 5769.4391 4856.7289 16799.3001 16949.5082 95113224 ppx Phosphorus Phosphorus utilization Pseudomonas superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae; 33601.1962 33350.9539 41407.9508 24392.5112 22467.353 40123.9813 29039.2671 42461.0457 37987.8454 36486.6419 19838.8208 45508.8383 126236917 CopA Metal Resistance Copper Mycobacterium sp. JLS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 1132.5441 950.8097 1025.4378 487.5864 546.9478 527.9913 670.266 842.1746 89340989 ureC Nitrogen Ammonification Mycobacterium flavescens PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 3156.0929 1280.1936 1532.6363 3519.0722 1955.6382 1436.5016 1760.8405 1673.1978 1360.8637 1929.7076 2152.124 2195.8712 148263805 Arylest Organic Remediation Aromatics Other aromatics Geobacter uraniumreducens Rf4 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter uraniireducens; 8968.0598 5918.5729 4560.266 7844.3259 2375.4213 5241.2217 5195.5887 4067.9555 4410.6018 5333.811 3113.6847 3366.7736 121611775 fnr Stress Oxygen stress Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 3617.3177 4170.8295 5087.8458 2775.8993 1458.4623 4028.536 2999.6136 5297.5438 4677.2809 3751.1119 957.4765 4916.1808 307946534 fccAB Sulphur sulfide oxidation Roseibium sp. TrichSKD4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseibium; 570.2413 378.5568 423.6965 564.1874 384.2093 610.7208 430.9045 721.5789 542.577 218757427 obgE Stress Radiation stress Desulfovibrio vulgaris str. 'Miyazaki F' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 1469.6142 2473.1516 2238.0194 1243.9544 1149.9148 2388.6239 1987.6987 1794.3858 2981.4987 2607.1426 2479.5952 157919012 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Salinispora arenicola CNS-205 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora arenicola; 16105.4588 24265.614 25175.0611 18045.9411 18979.6517 22242.0192 16226.6099 18151.5308 22340.8427 22343.7529 18348.5987 21063.3079 283822861 obgE Stress Radiation stress Rhodomicrobium vannielii ATCC 17100 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Hyphomicrobiaceae;genus:Rhodomicrobium;species:Rhodomicrobium vannielii; 4250.9729 2085.5358 2850.3353 4743.357 2351.0203 2981.7603 2466.9477 1906.7013 3435.7373 3584.4415 4426.8455 3584.0056 14023474 ChnA Organic Remediation Other Hydrocarbons Mesorhizobium loti MAFF303099 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium loti; 1232.9506 1417.3289 1038.8317 949.7864 1306.6058 1279.3459 1161.9914 1493.522 1156.0404 1110.4141 1124.2536 260222065 AceB Carbon cycling Carbon degradation Others Curvibacter putative symbiont of Hydra magnipapillata superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Curvibacter; 6678.8319 5433.8779 7243.6462 6295.2155 2477.1107 3508.4012 5842.2553 12645.6724 5889.0034 5444.084 4163.3917 4334.3755 161339353 catechol_B Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 1664.2751 858.7973 952.8888 1982.977 1469.6294 944.8635 1256.7584 908.813 830.7905 1147.8105 1706.852 1536.1966 148557259 mauAB Organic Remediation Herbicides related compound Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 9266.418 11596.7957 20910.1066 15621.6984 8705.1001 20969.613 14913.2918 20277.3194 21722.5326 15746.6257 8061.5037 20221.9681 163747557 CadA Metal Resistance Cadmium Oceanibulbus indolifex HEL-45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 6650.8811 3384.1933 4914.2298 6543.4994 4466.4116 4660.2148 3797.173 4476.5715 4828.7054 4388.9395 11006.1823 4718.4075 71914232 phzF soil_benifit Thermobifida fusca YX superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiopsaceae;genus:Thermobifida;species:Thermobifida fusca; 1528.7701 3077.7476 2089.9202 1556.6415 3468.0972 2192.2777 1837.0143 2047.8613 2535.391 2404.5274 1256.6309 1850.8871 256393616 narJ Stress Oxygen limitation Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 7408.9194 10506.0712 10451.8401 8876.5714 5622.7916 12012.6063 11085.3442 12150.523 15329.3479 10882.6096 6659.4519 10110.5377 46850308 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1760.9876 2533.7679 2169.5675 2036.9452 2400.8839 2410.9686 1861.423 1870.2796 2508.8664 2411.3724 2466.0535 2113.0651 16506204 nasA Nitrogen Assimilatory N reduction uncultured marine bacterium superkingdom:Bacteria; 2752.4255 2232.7505 7638.0716 5576.5226 2999.8536 3189.5331 2485.0822 3925.5124 2769.8724 4799.5857 3259.466 3303.9344 56686446 sir Sulphur sulfite reductase Synechococcus elongatus PCC 6301 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus;species:Synechococcus elongatus; 6928.2043 13891.4878 3519.9337 9348.8073 12524.7451 11367.2574 5945.9481 9236.7462 9026.5744 7017.3877 13975.6644 9915.7306 188991080 ptlB soil_borne_pathogen secretion system type IV Xanthomonas campestris pv. campestris str. B100 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas campestris; 3542.5535 4079.7202 3158.4415 4059.4259 3744.2997 3996.4846 3114.7747 2487.9969 3077.5674 1934.1961 4252.8834 3948.2013 229469673 cat_bac soil_benifit Exiguobacterium sp. AT1b superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;genus:Exiguobacterium; 1694.1216 826.1508 1138.2643 629.2214 845.8949 1039.8659 752.1252 873.9868 1299.2025 979.1302 110819013 chnB Organic Remediation Other Hydrocarbons Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 5484.004 2852.0642 4668.7161 5716.6483 4258.5771 4518.8031 6871.9969 4143.8009 4005.4402 3526.6439 3910.3406 4465.5263 91684421 ureC Nitrogen Ammonification Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 2367.6976 3556.5873 2362.87 3205.6591 3019.4388 3721.3637 3086.0074 2031.4116 3157.1879 3980.2028 2037.0942 3442.2054 163867291 amoA Nitrogen Nitrification 1198.631 2033.0365 1718.0292 1390.6001 2210.1699 1447.4695 1680.1934 1381.7511 1482.2456 1838.4666 2225.7594 1839.8738 149914287 sigma_70 Stress Sigma factors Roseobacter sp. AzwK-3b superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 4674.3589 5550.2153 7187.0277 5069.3992 7802.5314 5388.1822 4597.2099 3962.7209 4628.3554 4435.5818 7537.6232 6340.1979 121588763 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Halorhodospira halophila SL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Halorhodospira;species:Halorhodospira halophila; 737.4197 1278.1547 1567.7927 818.5093 729.07 1002.3555 1215.695 1259.3527 1031.6182 1403.9019 1158.7066 1436.9804 67904346 pheA Organic Remediation Aromatics Other aromatics Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 838.1936 795.8638 907.598 658.027 1376.4273 1265.0417 569.3634 948.612 145693266 mmoX Carbon cycling Methane Methane oxidation uncultured bacterium superkingdom:Bacteria; 2523.0421 2007.5768 2770.2663 2004.5095 2387.1003 2071.5356 1684.8388 2034.5103 1821.9053 1943.4982 3139.0787 2382.7273 158334322 hrcA Stress Heat shock Acaryochloris marina MBIC11017 superkingdom:Bacteria;phylum:Cyanobacteria;genus:Acaryochloris;species:Acaryochloris marina; 1412.8359 607.1828 879.8134 1190.041 635.9207 819.7691 1415.8505 1363.5705 641.8564 963.2514 901.7875 807.4209 78093566 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1411.9628 1490.6369 1573.4631 1438.7195 1143.154 1186.7212 1554.8543 951.9394 916.1402 917.8839 839.4035 148499101 oxdB Organic Remediation Aromatics Nitoaromatics Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 3463.5313 2960.2316 3518.6912 3600.3304 869.369 3351.7191 2443.8467 2154.0037 2569.8369 17140.5409 2263.0696 1975.0962 88702209 Arylest Organic Remediation Aromatics Other aromatics Congregibacter litoralis KT71 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;genus:Congregibacter;species:Congregibacter litoralis; 2960.5858 1251.4081 1774.9804 2008.2215 26170.5218 1619.3921 1624.0122 1361.658 4661.9975 1976.6179 1686.7194 1217.7435 118760441 tfdA Organic Remediation Aromatics Chlorinated aromatics Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 6668.8132 4473.6308 8231.0645 4968.6128 6289.2382 6276.6306 4449.978 11146.8246 5517.7905 5813.6556 8357.0064 7159.305 239832724 AceB Carbon cycling Carbon degradation Others Ochrobactrum intermedium LMG 3301 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum;species:Ochrobactrum intermedium; 1259.3988 3449.69 2202.9792 2026.1105 2798.4275 2758.089 2307.3625 1212.7029 2608.3483 2589.723 1561.9596 2851.6458 115371102 atzA Organic Remediation Herbicides related compound Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 5795.5124 6132.593 7392.8291 6643.5498 5918.057 7267.3492 5339.4336 6776.4268 7265.5484 7103.4906 7398.1958 7651.0553 15838132 ahpF Stress Oxygen stress Xylella fastidiosa 9a5c superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xylella;species:Xylella fastidiosa; 2568.2418 3198.4069 5875.5515 2279.7476 1608.9568 3709.3538 2520.5252 2869.7293 3968.7577 3590.8622 2963.3447 119473813 ABC_multidrug_fungi Fungi function metal resistance Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 1703.9675 755.0729 902.4223 1717.5463 1261.2452 1155.8818 1287.9689 1690.87 1076.3734 1319.1039 1092.2305 790.6949 15899375 CopA Metal Resistance Copper Sulfolobus solfataricus P2 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Sulfolobales;family:Sulfolobaceae;genus:Sulfolobus;species:Sulfolobus solfataricus; 588.2137 609.5656 648.272 559.4617 777.777 534.8329 630.5872 617.0516 536.0375 368.7049 987.5553 867.1429 145246158 amyA_fungi Fungi function carbon degradation Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 5734.7984 4320.4398 5120.0217 7203.0626 4837.317 5957.583 5561.4775 5676.2623 7858.1977 5547.6708 5386.6284 4148.7805 325498938 igaA soil_borne_pathogen regulation Escherichia fergusonii ECD227 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia;species:Escherichia fergusonii; 469.2466 499.9452 1259.1786 667.9478 1151.1176 621.9901 394.1086 717.1719 90439596 pcaG Organic Remediation Aromatics Other aromatics Vibrio angustum S14 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Photobacterium;species:Photobacterium angustum; 1243.5218 590.7831 975.3087 1140.9901 516.2723 746.1842 710.4724 763.5645 1008.4086 1116.7597 870.2984 32261764 nrfA Nitrogen Dissimilatory N reduction Helicobacter hepaticus ATCC 51449 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Helicobacteraceae;genus:Helicobacter;species:Helicobacter hepaticus; 2128.6564 1506.7817 1595.883 2058.1216 959.6179 1988.0047 2064.0331 2491.6524 2869.0282 2277.9557 1551.1005 1737.9798 259029725 fnr Stress Oxygen stress Mesorhizobium opportunistum WSM2075 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium opportunistum; 518.8658 548.7085 1074.0577 488.3043 273.8348 167840286 type_III_secretion virulence secretion Burkholderia thailandensis MSMB43 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia thailandensis; 2124.5327 2047.4504 2325.7575 4556.7537 1955.0112 2550.4395 2226.9077 2195.3003 1761.4404 2426.557 2559.3253 171059243 sigma_70 Stress Sigma factors Leptothrix cholodnii SP-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Leptothrix;species:Leptothrix cholodnii; 5012.9602 7088.3267 4374.9603 7295.2881 3969.8613 6632.65 4826.9127 4361.0847 5789.4398 5139.6822 4290.9143 6063.6284 227980505 amyA Carbon cycling Carbon degradation Starch Tsukamurella paurometabola DSM 20162 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Tsukamurellaceae;genus:Tsukamurella;species:Tsukamurella paurometabola; 4883.043 2887.9048 2836.2611 4025.4423 4581.6287 2677.9383 2948.4335 4356.8843 2818.9611 3185.7546 5235.3935 3114.9361 78037339 pilin virulence pilin Xanthomonas campestris pv. vesicatoria str. 85-10 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas euvesicatoria; 1740.5571 1367.7859 2008.3828 1077.0912 1468.9469 1460.4366 1231.9598 2143.7998 1424.63 1268.3412 1745.5188 170720362 nitA Organic Remediation Aromatics Other aromatics Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 4028.2251 3099.1169 3630.6695 4015.991 5001.1653 3411.2002 3666.3436 2949.085 2739.9347 3755.3998 4326.0623 4674.2168 120435539 CopA Metal Resistance Copper Gramella forsetii KT0803 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Gramella;species:Gramella forsetii; 1070.3795 2863.1914 925.4237 968.6753 505.4291 680.6548 432.1346 670.7225 14490.743 1001.2013 966.5239 151559696 CopA Metal Resistance Copper Ochrobactrum anthropi ATCC 49188 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum;species:Ochrobactrum anthropi; 500.8127 649.4198 550.5841 84517008 PobA Organic Remediation Aromatics Aromatic carboxylic acid Loktanella vestfoldensis SKA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Loktanella;species:Loktanella vestfoldensis; 1218.9474 1175.265 1349.6641 1326.1533 1247.013 1155.3732 1059.7401 1351.7628 1156.8675 1543.9515 1014.9795 1580.4971 84780040 pnbA Organic Remediation Aromatics Nitoaromatics Sodalis glossinidius str. 'morsitans' superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Sodalis;species:Sodalis glossinidius; 2648.7684 2356.6209 2468.8773 2536.7405 4164.2155 2889.3155 1847.8996 1895.3717 2190.2097 2204.6368 3415.5779 2547.4468 197789546 ZitB Metal Resistance Zinc Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 1134.7135 745.4395 1054.6652 1049.7372 900.5779 940.5711 1356.0561 758.7503 961.4042 812.5267 921.2234 968.0757 7160915 nirK Nitrogen Denitrification nitrifying uncultured bacterium wB75 superkingdom:Bacteria; 2414.3345 2445.4748 2284.1386 2290.459 2637.935 2202.8518 1692.6156 2231.7858 1630.0706 1564.3079 3830.5789 2380.1593 167629840 sped_bac soil_benifit Heliobacterium modesticaldum Ice1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Heliobacteriaceae;genus:Heliobacterium;species:Heliobacterium modesticaldum; 4546.6647 2410.6876 2361.7722 4845.0543 2708.0094 1949.769 2986.9619 2312.497 2243.09 3179.4958 3675.0075 2347.1193 27125563 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 3510.1682 4408.3252 3741.344 2535.494 4291.5857 4084.5772 3795.7392 2475.1906 3128.217 2603.9155 4414.8332 3681.2719 261194902 ureC Nitrogen Ammonification Ajellomyces dermatitidis SLH14081 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces dermatitidis; 2241.7492 1272.1021 2027.596 2782.9124 1212.6898 1380.9515 1108.5402 1517.434 1201.5704 1121.2232 1797.9052 1224.0054 255336405 glnA Stress Nitrogen limitation Hyphomicrobium denitrificans ATCC 51888 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Hyphomicrobiaceae;genus:Hyphomicrobium;species:Hyphomicrobium denitrificans; 4860.3827 1752.5091 735.1042 1258.6245 873.9588 1380.2261 1559.4807 819.6771 924.9838 1449.1148 1027.9407 1370.0764 115353433 endochitinase Carbon cycling Carbon degradation Chitin Chaetomium globosum superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium; 830.3712 554.6541 1047.1484 474.9018 1205.7232 605.1992 574.6557 197210241 CODH Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 1927.9846 2086.0837 1867.9156 1675.9812 1111.1805 2234.8358 1922.4847 2219.7422 2320.1594 1971.928 1287.4064 1947.5698 1592313 nifH Nitrogen Nitrogen fixation Methanocaldococcus jannaschii DSM 2661 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanococci;order:Methanococcales;family:Methanocaldococcaceae;genus:Methanocaldococcus;species:Methanocaldococcus jannaschii; 786.7834 741.8191 990.6187 598.5325 391.8967 624.2671 564.5554 509.3264 774.0583 677.4217 422.6253 52747747 nitA Organic Remediation Aromatics Other aromatics Pseudomonas sp. superkingdom:Bacteria;phylum:Proteobacteria; 726.2574 1294.5926 650.0771 831.5219 1104.0283 1625.8015 932.9005 895.4071 1016.9844 1142.5861 622.6384 197118551 CopA Metal Resistance Copper Geobacter bemidjiensis Bem superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter bemidjiensis; 2483.8198 1236.1298 1424.3898 2081.3526 1083.6702 2044.719 2422.0533 1981.5662 1585.0591 1644.1369 1300.764 1720.2925 170690758 Catechol Organic Remediation Aromatics Other aromatics Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 1050.3922 988.2616 1228.5865 731.1259 962.6388 674.2444 767.5245 1728.4901 799.4665 776.6712 841.0052 965.2673 167360492 nagG Organic Remediation Aromatics Aromatic carboxylic acid Rhizobium leguminosarum bv. trifolii WSM1325 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1601.3582 1221.2465 2270.079 1625.0607 2168.459 1508.7455 1466.5145 1113.8473 1198.0931 1300.7239 1710.3355 2354.1228 116611733 katE Stress Oxygen stress Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 3053.0537 2822.82 3427.422 3215.6994 4086.235 3675.8767 2680.489 3738.9493 2993.2874 4413.0032 3242.9851 4316.8462 28193601 bphB Organic Remediation Aromatics Polycyclic aromatics Ralstonia sp. SBUG 290 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 2540.3765 1168.556 1850.1932 2413.8942 938.6108 1268.4128 1777.6043 1235.58 1433.6812 1692.3421 1273.1838 1582.8264 227496266 glnA Stress Nitrogen limitation Actinomyces urogenitalis DSM 15434 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Actinomyces;species:Actinomyces urogenitalis; 1615.0591 3130.7821 2054.5165 2077.216 2514.1671 2397.3434 4705.4315 1664.0833 2971.7834 1935.7375 1934.0767 1624.784 161382499 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Oceanibulbus indolifex HEL-45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 758.3472 1631.285 1003.6025 685.0817 1093.3395 1165.4388 1017.3289 1612.4586 964.6368 1216.8303 742.6725 940.4599 108462023 MATE_antibiotic Antibiotic resistance transporter Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 9158.6239 8046.9746 8682.7627 11432.4474 6933.6538 9265.1362 6378.2839 7475.8045 17742.8444 8480.0251 7990.9915 9148.3945 84686388 AceB Carbon cycling Carbon degradation Others Rhodobacterales bacterium HTCC2654 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Maritimibacter;species:Maritimibacter alkaliphilus; 1576.1861 719.2026 823.531 1102.4727 1134.3301 633.971 681.4221 757.4604 616.5332 574.4241 149919858 sigma_24 Stress Sigma factors Plesiocystis pacifica SIR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Nannocystaceae;genus:Plesiocystis;species:Plesiocystis pacifica; 16389.7265 10696.1009 14583.2058 18154.8912 8017.9686 17156.6969 20852.0021 11525.1799 12738.8341 21451.3973 13775.9479 10722.0942 222149091 pstB Stress Phosphate limitation Agrobacterium vitis S4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium vitis; 1512.7185 1011.9245 1249.4798 1713.2864 1261.2039 1410.8839 1845.2963 946.4528 1089.9348 887.1564 1405.0527 295700213 cat_bac soil_benifit Burkholderia sp. CCGE1002 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 923.6638 1007.9106 1044.869 763.9384 936.9217 1000.6512 970.5777 1091.6544 906.2633 108757988 CopA Metal Resistance Copper Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 469.8242 1200.0459 859.5636 538.5131 152993065 ArsC Metal Resistance Arsenic Sulfurovum sp. NBC37-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;genus:Sulfurovum; 880.022 1518.7427 1040.4601 3768.9216 1331.4087 1268.4466 1194.9525 1069.0896 1535.0853 839.2497 116193587 AceB Carbon cycling Carbon degradation Others Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 1309.0714 782.8899 996.7399 1047.0594 1126.3651 888.1343 852.4902 1104.6359 970.1273 992.6192 916.3596 27530062 gyrB other category gyrB Legionella pneumophila subsp. fraseri superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Legionellales;family:Legionellaceae;genus:Legionella;species:Legionella pneumophila; 1678.7417 1862.1078 1423.8954 1843.7279 2311.4897 2011.0823 1305.094 1669.385 1510.6574 1511.6246 2670.3587 1467.3152 157085868 TerC Metal Resistance Tellurium Citrobacter koseri ATCC BAA-895 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter;species:Citrobacter koseri; 8550.0736 7883.7043 8781.2677 5705.9779 9584.9932 8228.2466 7309.6205 9983.2409 8653.8317 8818.2122 12638.9595 8476.7865 159185808 pcc Carbon cycling Carbon fixation Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 672.9312 709.1614 735.4653 769.1297 900.7865 861.0784 768.0579 508.4521 912.6942 911.0818 921.7976 120401609 tfdB Organic Remediation Aromatics Chlorinated aromatics Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 1788.2149 4016.3005 2605.374 1889.916 4000.5947 15196.3447 2828.1108 1746.8644 2258.6938 2088.5281 36764.7031 1505.0379 62003555 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2537.9923 21029.3631 3123.8812 2533.5216 4222.0421 3893.4358 3932.2923 3778.9176 3918.6789 4407.3418 3470.4391 83749274 nagG Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia solanacearum UW551 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 3762.0104 1275.0583 2008.0193 3855.908 1726.0382 1252.2152 2155.7031 1766.1586 1630.886 1998.225 3161.3255 1771.212 317161325 sid_bac soil_benifit Staphylococcus pseudintermedius HKU10-03 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Staphylococcaceae;genus:Staphylococcus;species:Staphylococcus pseudintermedius; 863.4281 701.6433 735.4653 543.5718 887.42 884.3803 698.6974 742.585 548.6188 1602.2729 751.871 114320293 pstB Stress Phosphate limitation Alkalilimnicola ehrlichii MLHE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Alkalilimnicola;species:Alkalilimnicola ehrlichii; 621.0288 587.6229 764.0936 487.399 998.0868 880.3859 536.764 457.1858 536.4661 680.0396 260910382 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Prevotella sp. oral taxon 472 str. F0295 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Prevotellaceae;genus:Prevotella;species:Prevotella sp. oral taxon 472; 4512.0698 8079.7867 7435.0567 4252.1226 10585.9619 5851.2289 5977.3994 7218.1893 5631.3521 7037.3868 5042.7402 4528.0085 82702765 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Nitrosospira multiformis ATCC 25196 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosospira;species:Nitrosospira multiformis; 1470.2321 1243.0108 1171.6354 1487.4964 1583.7848 1555.8877 896.8112 1394.3638 1308.758 855.2607 2249.8801 1465.4613 119856034 atzB Organic Remediation Herbicides related compound Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 5756.2095 8172.2467 5131.3625 4219.865 11331.4129 7224.5601 5046.7281 5484.5064 7047.8395 6308.6755 3393.283 4368.1365 17232133 ahpC Stress Oxygen stress Nostoc sp. PCC 7120 superkingdom:Bacteria;phylum:Cyanobacteria;order:Nostocales;family:Nostocaceae;genus:Nostoc; 1258.5794 991.9315 920.8177 1252.94 952.9615 1101.3511 749.3729 754.0124 1011.926 256828085 narI Stress Oxygen limitation Desulfomicrobium baculatum DSM 4028 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfomicrobiaceae;genus:Desulfomicrobium;species:Desulfomicrobium baculatum; 959.7511 685.7108 634.4987 853.448 471.6873 822.3755 562.8733 254514274 B_lactamase_C Antibiotic resistance Beta-lactamases gamma proteobacterium NOR5-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 498.2336 604.2902 514.6122 825.3632 561.2574 363.1217 87302506 nifH Nitrogen Nitrogen fixation Synechococcus sp. WH 5701 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 937.9908 2768.8935 1072.3307 1426.6109 3312.174 959.1098 2449.9833 728.5239 1576.4855 1277.6093 1849.9185 1035.474 86748877 NiR Nitrogen Assimilatory N reduction Rhodopseudomonas palustris HaA2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 3686.8567 2060.5732 3014.7042 3308.5687 3156.9712 2563.8243 2608.0487 1752.8742 2471.7004 2745.7629 3583.7861 2410.3774 86569733 TehB Metal Resistance Tellurium Frankia sp. CcI3 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 3119.9086 4166.9047 3439.2863 3257.3879 4557.5027 4570.8584 2907.1865 3812.2406 3773.0613 3128.8001 4068.1818 4185.2216 260650061 hrcA Stress Heat shock Streptomyces scabiei 87.22 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces scabiei; 1910.9592 1169.3588 2080.7022 2275.1178 756.3528 1110.6988 938.9987 1535.5843 1346.1977 1305.4138 1105.7324 875.9728 226360048 AceB Carbon cycling Carbon degradation Others Rhodococcus opacus B4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus opacus; 4019.8164 1606.5941 2094.442 3262.0929 2073.2252 2878.6517 3081.6258 3529.8843 2400.2284 2812.0135 2279.094 2484.5114 111021049 pcc Carbon cycling Carbon fixation Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 2464.1549 4035.0958 4887.7534 3238.8619 2417.0754 4781.4654 3608.7974 4898.8049 5584.4768 3598.3884 1691.4522 5331.8178 119482658 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 596.8004 611.7461 743.5929 1052.737 822.0855 704.5907 442.8437 773.112 619.7855 545.9612 1082.9329 1259.4211 187718162 sigma_24 Stress Sigma factors Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 2647.0222 2418.2821 3547.4455 2486.7309 3006.3188 2730.4199 2636.9939 4709.5788 2781.5097 2869.0852 2587.7621 4022.3559 167573108 MFS_antibiotic Antibiotic resistance transporter Burkholderia oklahomensis C6786 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia oklahomensis; 2462.3147 3640.3696 2687.5803 1886.2862 4179.2125 2479.9769 2206.7227 2645.1104 2555.1126 2621.8824 27611.1859 2022.8711 163745729 phzF soil_benifit Oceanibulbus indolifex HEL-45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 3428.8894 10762.6807 8105.865 5982.1885 14142.7708 9316.7802 5445.2153 8346.259 8224.1491 7366.4733 9249.8087 8543.4708 121998209 sigma_38 Stress Sigma factors Halorhodospira halophila SL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Halorhodospira;species:Halorhodospira halophila; 2728.0727 2772.0919 2981.8159 2498.8121 1432.1085 3185.794 4291.9412 2672.3692 2615.8851 2615.417 2185.9987 1072.9908 206568620 phn Organic Remediation Herbicides related compound Klebsiella pneumoniae 342 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella pneumoniae; 2325.9903 2092.4423 2803.838 1640.0594 1850.4128 1621.9197 1893.7805 4665.6282 1737.6951 1629.8215 3277.2682 2186.9177 77458206 cytochrome Energy process Energy process Pseudomonas fluorescens PfO-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 6525.5309 5436.1652 5488.9175 8875.8591 4475.7586 7574.4176 6351.6959 7379.866 5225.6662 6957.4909 6199.8853 6560.0802 198283059 trzE Organic Remediation Herbicides related compound Acidithiobacillus ferrooxidans ATCC 53993 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus;species:Acidithiobacillus ferrooxidans; 2447.2034 1892.983 2949.6836 1945.9115 3032.1985 1574.7176 1783.5172 2991.8615 1968.9848 1960.2926 2930.9776 2701.7434 52631734 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1163.6802 917.3493 1224.879 415.7603 824.3906 804.4988 1004.0857 789.7979 732.6084 914.8079 242213349 per_fun soil_benifit Postia placenta Mad-698-R superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Postia;species:Postia placenta; 1221.9092 2024.6519 3260.7995 917.8027 1502.2778 1829.7672 1521.6978 2451.9988 2116.0409 2107.846 761.1234 2404.5892 159899376 sped_bac soil_benifit Herpetosiphon aurantiacus ATCC 23779 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Herpetosiphonales;family:Herpetosiphonaceae;genus:Herpetosiphon;species:Herpetosiphon aurantiacus; 1088.2377 1436.4747 2137.6969 1183.5963 2475.9731 1226.4306 2145.9936 2371.6748 1467.4398 2696.0499 1486.7746 2010.1 229917621 AceA Carbon cycling Carbon degradation Others Exiguobacterium sp. AT1b superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;genus:Exiguobacterium; 1008.0402 1131.9755 704.1938 758.2394 689.7295 413.4312 510.0163 153005121 cap virulence capsule Anaeromyxobacter sp. Fw109-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter; 12549.8222 10055.3033 10509.7654 8768.4432 9329.8737 8356.4819 8084.4229 7637.8565 7886.3299 7497.2436 15311.1681 8489.6125 240139145 sox Sulphur Sulphur oxidation Methylobacterium extorquens AM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 5550.0506 4844.4392 5212.8127 6396.3469 5402.3111 5388.1224 3774.8749 4333.9832 4735.8052 5287.191 6682.1311 6163.1055 83574852 pstC Stress Phosphate limitation Rhodospirillum rubrum ATCC 11170 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum rubrum; 1937.7298 3623.2564 3178.5642 1978.676 2890.7794 2291.8118 2097.1247 3656.7491 2445.1933 3685.3862 1181.1216 3522.8967 26278822 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 969.6372 1387.0335 1445.9809 838.6584 887.7423 1089.5432 1258.8346 2123.737 1334.9099 1372.3231 2137.3969 1405.2724 171090037 CopA Metal Resistance Copper Geobacillus sp. WCH70 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 642.4668 1176.9151 646.3549 719.6406 881.0117 616.7629 1603.4919 680.0059 858.5965 805.0117 206688121 CopA Metal Resistance Copper Rhodobacterales bacterium Y4I superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales; 15775.5212 15163.2712 7921.955 11846.4003 11499.8684 9969.0239 7709.1629 8519.0475 9423.2789 7729.3829 20326.208 8166.8474 90954635 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 16117.0643 7243.9515 9198.7981 11730.6014 10130.0609 5671.6188 8690.5671 7062.5404 7770.9239 10567.4924 21214.0372 8124.3732 257056603 proV Stress Osmotic stress Saccharomonospora viridis DSM 43017 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharomonospora;species:Saccharomonospora viridis; 1709.4344 1081.9109 1565.9026 1855.905 1084.8077 1292.7767 1316.7477 1577.453 1112.7996 1511.0998 999.5917 1237.724 192360773 mip soil_borne_pathogen intracellular survival Cellvibrio japonicus Ueda107 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Cellvibrio;species:Cellvibrio japonicus; 648.1658 1249.2419 723.6738 736.831 1887.0426 957.8904 974.1206 433.8074 1029.1136 1149.4073 694.1679 73538235 benD Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 1033.3198 944.9497 851.4932 1385.6553 859.9082 1195.5309 1847.0966 998.3954 826.3396 648.302 118729447 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 2695.2845 5549.6632 4945.3734 3078.0667 2263.6169 4138.4796 4819.4111 6117.9956 4026.8276 4885.8688 2581.2514 4576.1404 193201727 bphA Organic Remediation Aromatics Polycyclic aromatics Bordetella sp. IITR02 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella; 2107.1581 1952.8397 1773.7882 1823.6747 1671.8803 1515.8511 1972.7664 1968.076 2239.8684 1969.1471 2291.9712 2128.8639 120577985 ara_fungi Carbon cycling Carbon degradation Hemicellulose Penicillium capsulatum superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium; 3109.3888 727.8056 2484.3474 2443.9398 1872.7471 1385.6552 1499.7323 1012.5345 1298.6584 1783.885 2333.5097 2329.3634 194348083 iro virulence Iron oxidation Stenotrophomonas maltophilia R551-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 1279.1174 618.1923 842.5777 1456.5126 744.3324 616.229 650.8437 647.3244 749.9469 843.9603 1018.7393 852.9299 192292049 CadA Metal Resistance Cadmium Rhodopseudomonas palustris TIE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 5961.9386 11360.4085 8198.4234 8257.5666 8009.3989 10399.8548 10787.6459 9746.4934 12045.4778 16263.1521 5266.4093 12172.0654 260578346 pstS Stress Phosphate limitation Corynebacterium jeikeium ATCC 43734 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium jeikeium; 728.5275 1622.9683 689.3461 858.6567 1465.7807 1335.5666 1393.2427 752.91 1226.5165 1354.9035 1491.6077 146303719 thioredoxin Bioleaching Sulphur Metallosphaera sedula DSM 5348 1550.3558 1489.8086 1397.5399 1207.8203 1796.1316 1711.0143 1277.7834 1191.8417 1511.6592 1440.1928 2419.686 1523.3243 27381192 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 446.7876 646.7739 688.2847 494.9045 973.4015 633.0099 633.8907 724.8886 457.6867 568.0261 571.252 56809505 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 488.667 482.1667 451.7433 394.6799 1244.8177 533.3298 535.2123 961.3455 468.2697 504.8687 780.7677 949.0838 78212641 nitA Organic Remediation Aromatics Other aromatics Synechococcus sp. CC9605 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 3147.8857 4694.574 5118.6841 2849.3043 3157.7296 5039.581 5522.3755 5364.4199 6448.1173 5844.5085 1532.0009 5519.1545 1652838 sigma_70 Stress Sigma factors Synechocystis sp. PCC 6803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechocystis; 1789.5447 1984.7932 2332.8023 1709.6018 1277.0006 2054.0667 2900.3503 2311.335 1753.2931 1630.1006 1587.3056 1428.9058 134268267 alkH Organic Remediation Other Hydrocarbons Geobacillus thermodenitrificans NG80-2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus;species:Geobacillus thermodenitrificans; 3027.5323 3742.6159 3860.2043 2864.4401 6105.179 3360.992 3322.7414 2938.6027 3062.5054 4489.6385 2933.0437 4264.8692 126035091 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 1705.7406 2731.6471 2027.255 1970.6492 1847.6699 1942.9265 3168.8913 1773.3728 2291.1827 1799.0379 2118.3615 1820.6073 21646975 fccAB Sulphur sulfide oxidation Chlorobium tepidum TLS superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobaculum;species:Chlorobaculum tepidum; 1332.1481 1181.4515 718.3233 1200.8209 1960.0937 723.6547 1143.0311 644.1773 722.933 784.0411 1475.0386 884.5006 222450795 GcdB Organic Remediation Aromatics Aromatic carboxylic acid Chloroflexus sp. Y-400-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus; 3535.9717 1050.509 2460.7498 2870.5903 1332.9691 1705.4356 1780.294 1684.1159 1793.4236 2101.1238 3053.0947 2361.6618 120325894 hly virulence hemolysin Marinobacter aquaeolei VT8 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter hydrocarbonoclasticus; 795.4069 909.194 592.2679 671.3294 935.0653 776.9941 743.9475 599.7458 655.7536 612.2787 530.8377 187426375 sigma_24 Stress Sigma factors Akkermansia muciniphila ATCC BAA-835 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobiaceae;genus:Akkermansia;species:Akkermansia muciniphila; 771.7661 1039.869 1068.8121 546.1606 1008.5318 1039.2078 1194.9798 1023.852 1391.6984 1129.9554 1070.7799 295794902 spe soil_benifit Thiomonas intermedia K12 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Thiomonas;species:Thiomonas intermedia; 1583.2112 1171.9838 1380.5532 1236.734 826.541 1098.1655 811.0311 1014.4833 1099.1704 1122.6357 1058.7162 967.2449 152983308 pimF Organic Remediation Aromatics Aromatic carboxylic acid Janthinobacterium sp. Marseille superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Janthinobacterium; 1203.601 1465.6092 1155.3177 1866.5094 1191.2085 1044.2523 1217.8472 1280.4344 1265.2556 1737.8836 163261088 CysJ Sulphur sulfite reductase Bordetella petrii superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella; 5210.7821 5527.5803 6159.1878 6931.7557 4913.8376 6332.926 7212.1121 6512.5223 5577.8602 7143.2113 6733.3035 5965.4558 268163197 oxyR Stress Oxygen stress Photobacterium damselae subsp. damselae CIP 102761 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Photobacterium;species:Photobacterium damselae; 3008.66 2587.618 1586.9558 2021.2616 2106.7646 1607.6813 1683.038 1690.3253 1846.0885 1601.0455 3188.0168 1462.4539 167647614 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 2205.4489 2534.3541 1855.6164 2409.9562 1228.1039 3249.4031 2229.1241 1799.0982 2129.0644 2469.6055 1870.6277 1742.1819 126319242 CadA Metal Resistance Cadmium Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 5849.161 2055.1321 4296.418 5036.3196 1837.8426 2358.6664 3635.1445 4021.8987 2552.3751 4710.5444 1590.717 2170.2054 77799789 benD Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia gladioli superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 2926.723 2891.2985 2542.8543 2940.9271 4803.1329 1271.3244 3365.2616 3688.2082 3652.7919 3683.4767 2196.8097 2898.8027 241764667 ahpC Stress Oxygen stress Acidovorax delafieldii 2AN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax delafieldii; 4302.9558 2100.0241 3807.993 4502.6778 3545.8882 3176.7305 2923.9445 6654.2149 2918.1401 3160.3509 4048.0256 4191.1952 221737432 nmoA Organic Remediation Aromatics Nitoaromatics Agrobacterium vitis S4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium vitis; 696.7507 2018.2041 1177.8873 757.9799 2371.5535 1372.5086 2969.4355 805.8419 1820.6356 1009.3242 1746.0121 1176.3679 19909539 gyrB other category gyrB Caulobacter fusiformis superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 768.0856 1545.0476 1037.0579 776.1292 1343.8708 903.629 895.1366 1082.7151 853.3661 988.7333 1122.2075 160899702 katE Stress Oxygen stress Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 4758.8016 3467.1305 2113.0961 4225.6869 5826.7014 3161.7062 2243.7028 2423.3843 3434.009 2692.3979 4684.8813 2753.8691 158318237 glnA Stress Nitrogen limitation Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 7388.5829 7169.6624 7646.2573 4903.8509 4226.6114 8307.9936 5993.7904 8766.1926 7944.9008 6560.7469 4180.7375 7056.4772 261376676 cap virulence capsule Geobacillus sp. Y412MC61 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 2789.5389 3716.2516 3547.0238 3051.5483 2841.6552 3425.1096 2734.2385 2667.237 2984.5973 3489.5378 3549.443 3796.5687 28853959 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas syringae pv. tomato str. DC3000 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 5693.1717 2419.1614 3573.6747 4547.2495 2672.119 2964.5008 2658.7185 2529.1998 2885.1037 4188.8926 3621.8051 3170.1676 32307979 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1649.3384 1310.9031 1162.7081 1568.1748 2297.7251 1445.5103 1907.9577 1218.1256 1183.1359 1213.6702 6308.9883 1605.5862 126714306 oxyR Stress Oxygen stress Roseobacter sp. CCS2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 746.2447 1135.9733 1127.0864 648.6874 1090.8938 665.495 856.9636 1975.6352 1018.4083 1053.5657 1671.4397 1157.3761 154351471 B_lactamase_B Antibiotic resistance Beta-lactamases Bacillus amyloliquefaciens FZB42 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus amyloliquefaciens; 649.512 1126.6394 909.4739 730.7972 821.5736 1063.2949 1124.7476 977.0326 1523.0518 1059.7184 1491.039 1181.5038 157885102 amoA Nitrogen Nitrification Archaea superkingdom:Archaea;phylum:Crenarchaeota; 3089.2135 1064.7009 2127.0886 1139.7126 837.9797 621.0915 902.5843 803.6951 1355.272 1891.601 116804546 nasA Nitrogen Assimilatory N reduction uncultured prokaryote 2548.9262 1549.2526 1436.9228 2631.815 2940.0362 1444.8522 3075.6613 1354.3107 1552.314 1672.0642 2328.9691 2287.0677 83645847 exochitinase Carbon cycling Carbon degradation Chitin Hahella chejuensis KCTC 2396 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Hahellaceae;genus:Hahella;species:Hahella chejuensis; 2473.827 1487.7825 1836.263 2059.7965 1630.046 1676.383 1457.1319 1773.6754 1738.0039 1819.1095 2677.3979 1740.6507 170143520 ahpC Stress Oxygen stress Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 372.829 743.7192 566.0967 651.1519 606.9242 588.4693 417.614 655.4151 76667400 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 3725.6357 3476.9336 2907.6645 3874.0847 2258.3272 4040.9646 3049.4747 2780.5088 2790.6658 3319.7185 3032.9861 3766.8931 34558427 sped_bac soil_benifit Wolinella succinogenes DSM 1740 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Helicobacteraceae;genus:Wolinella;species:Wolinella succinogenes; 4236.2645 10435.9107 8318.4032 6565.4017 7349.4933 10992.9763 8111.0912 8804.0305 10262.0256 10522.9382 2895.4212 10360.5626 148834499 dmsA Organic Remediation Others Vibrio shilonii AK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio shilonii; 647.6516 1361.6057 1156.8051 898.6672 884.0642 873.7613 787.5114 1028.9842 900.0085 871.8652 774.1688 973.0468 146401347 oxyR Stress Oxygen stress Acidiphilium cryptum JF-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Acidiphilium;species:Acidiphilium cryptum; 3571.6613 1926.5979 1777.9174 3352.8801 2246.3637 4411.2075 3681.0255 2365.6953 2147.2601 2094.3904 2183.5722 2767.5077 46122639 tre_fun soil_benifit Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 344.93 416.7877 480.1782 2474.2722 592.2545 863.8059 162954939 ppx Phosphorus Phosphorus utilization Renibacterium salmoninarum ATCC 33209 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Renibacterium;species:Renibacterium salmoninarum; 2601.93 3627.729 3282.3761 2399.4776 2716.5981 3563.5001 3104.8989 3165.5457 3786.4285 3314.7159 2883.8413 3257.2856 92116257 pstB Stress Phosphate limitation Nitrobacter hamburgensis X14 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter hamburgensis; 10372.9707 9209.9239 11317.7682 14652.078 11112.6388 9462.5592 8908.0541 6402.8091 10778.3647 12329.9824 12747.6708 8624.5328 239905010 narI Stress Oxygen limitation Desulfovibrio magneticus RS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio magneticus; 948.4197 14092.4857 1481.6172 735.4939 1934.1296 568.8741 572.0794 1001.6787 117307079 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria; 686.7839 2085.4976 1468.2809 814.7126 612.368 70731603 pimF Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 1230.0492 782.7503 489.0908 585.3787 1508.8411 257803373 grpE Stress Heat shock Enterococcus gallinarum EG2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Enterococcaceae;genus:Enterococcus;species:Enterococcus gallinarum; 441.8042 687.6775 717.131 515.9173 823.4783 802.3768 15087.2521 719.648 512.3167 542.414 149244360 tre_fun soil_benifit Lodderomyces elongisporus NRRL YB-4239 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Debaryomycetaceae;genus:Lodderomyces;species:Lodderomyces elongisporus; 607.412 1296.3639 975.5704 864.9165 1775.6363 936.8918 901.6402 959.0578 935.3397 1050.1376 1178.4415 148556166 vanA Carbon cycling Carbon degradation Others Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 4717.3825 3269.9818 2495.3247 3697.9071 4015.3642 2978.0512 2672.0239 2632.0377 3370.3402 2658.5641 4726.4563 2895.2597 74038476 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 2879.5084 4858.6513 4120.5484 3660.6909 3175.817 4986.1721 4310.9245 3704.5005 5236.1969 5297.7768 3003.8202 5394.2588 78093540 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1693.9917 1544.6207 1889.319 1305.5454 1522.6023 1344.3385 1508.6102 2417.9556 1604.3265 1351.1572 1684.8214 1713.9962 153092753 pstC Stress Phosphate limitation Mannheimia haemolytica PHL213 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Mannheimia;species:Mannheimia haemolytica; 1152.2359 1080.2629 1330.9154 1198.3006 3301.2154 1477.9205 776.1559 835.0617 1637.7356 1151.8639 1801.0042 1156.099 iegcoxL90 CODH Carbon cycling Carbon fixation 1260.7017 783.7563 827.5875 788.2241 1555.0042 826.3125 845.4475 1015.4395 828.5772 940.4384 717.6937 258405703 hly virulence hemolysin Desulfohalobium retbaense DSM 5692 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfohalobiaceae;genus:Desulfohalobium;species:Desulfohalobium retbaense; 827.2731 1284.0673 1122.0703 1277.3866 1604.899 1250.1293 1021.83 1141.9928 606.4322 118648765 nitA Organic Remediation Aromatics Other aromatics Burkholderia cenocepacia MC0-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia cenocepacia; 19708.4173 16339.9188 21201.3616 21930.8331 13784.5872 21719.4166 16113.7428 18921.7256 30873.1294 22687.0319 16949.4298 24976.6564 146410739 Catechol Organic Remediation Aromatics Other aromatics Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1202.5062 1551.1449 1737.6648 790.4568 1969.1563 1210.1208 957.093 1536.6132 1137.8157 988.2141 662.3342 1071.6656 222438035 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia alexandrii; 690.2589 1276.8678 696.1796 1168.0427 584.9575 953.9868 912.2846 647.6875 1008.1688 1067.0101 644.6761 993.2196 209401830 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2076.5862 2823.1386 2256.7027 2533.9394 1518.4408 3428.0036 2954.7593 1639.6327 2717.5687 2495.735 3709.3507 2289.9859 162568567 aoxB Metal Resistance Arsenic uncultured bacterium superkingdom:Bacteria; 2800.8355 1080.8618 972.3863 1859.7403 1415.0829 833.7682 1106.7164 1110.5791 960.9674 1115.2603 1964.9243 1162.718 83265614 mmoX Carbon cycling Methane Methane oxidation Methylomicrobium buryatense superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae;genus:Methylomicrobium; 2476.9425 2463.7221 3196.0406 1417.8308 1031.8348 2670.5798 2423.6476 2593.8246 3198.8212 2323.1798 1366.111 2484.4565 51891899 pstB Stress Phosphate limitation Symbiobacterium thermophilum IAM 14863 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XVIII. Incertae Sedis;genus:Symbiobacterium;species:Symbiobacterium thermophilum; 4118.5438 3389.9657 3745.6477 3776.2158 4617.4243 3306.1323 2631.7979 3544.9904 3035.4565 2818.088 7123.0066 3858.1033 56962348 xylA Carbon cycling Carbon degradation Hemicellulose Bacillus clausii KSM-K16 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus clausii; 5252.6596 3452.3278 6471.4523 5608.7118 1150.2541 2052.2719 2969.3437 4524.8918 3589.4566 3904.9967 1136.9162 3453.7818 126719189 fnr Stress Oxygen stress Roseobacter sp. SK209-2-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 525.0551 826.2018 704.8599 757.7603 767.6909 603.8343 719.8452 806.7205 258570505 AceA_fungi Fungi function carbon degradation Uncinocarpus reesii 1704 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Onygenaceae;genus:Uncinocarpus;species:Uncinocarpus reesii; 4449.5425 1829.06 3567.6117 2172.6159 2029.5804 2482.1455 2392.8672 1927.38 1794.8448 2977.7459 3187.1519 2021.3675 182678157 nmoA Organic Remediation Aromatics Nitoaromatics Beijerinckia indica subsp. indica ATCC 9039 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Beijerinckia;species:Beijerinckia indica; 3779.9559 3775.0839 3447.1085 3483.171 3246.1948 4545.2009 3399.2364 5119.8289 3517.6526 3334.6145 5080.6991 4090.5645 90195276 nhh Organic Remediation Aromatics Nitoaromatics Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 1981.6803 1775.0252 2175.1216 2415.9146 2387.0624 1981.9026 1941.9095 1997.1566 1580.6325 1989.6268 2305.8574 2326.0264 147676615 ctsR Stress Protein stress Pelotomaculum thermopropionicum SI superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Pelotomaculum;species:Pelotomaculum thermopropionicum; 701.949 1044.3416 680.1426 725.0511 706.5448 1086.2752 663.9656 657.8466 734.6635 880.9882 920.3832 115372250 mhpA Organic Remediation Aromatics Aromatic carboxylic acid Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 3363.2928 2859.3466 3411.3414 3477.4865 4448.5612 3594.4372 2297.6759 3392.7308 2657.07 3023.9806 5172.329 4197.5189 169813161 grpE Stress Heat shock Shewanella woodyi ATCC 51908 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella woodyi; 932.2014 1462.6032 1162.9117 1400.5034 1348.7281 1890.5917 1741.6475 1504.099 1207.7629 253779412 phoA Stress Phosphate limitation Photorhabdus asymbiotica superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Photorhabdus; 3954.0251 2638.6264 3765.4796 3768.2987 4484.6127 3273.4379 2297.4063 3987.1111 2435.2334 2921.5675 5630.6944 4111.6025 229829028 groEL Stress Heat shock Shuttleworthia satelles DSM 14600 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Shuttleworthia;species:Shuttleworthia satelles; 10399.889 16750.2418 12488.0369 11198.7265 18513.6452 15456.9795 13520.5385 12322.6094 13972.4798 11264.1783 12126.4426 10950.4906 221183584 akbF Organic Remediation Aromatics BTEX and related aromatics Burkholderia multivorans CGD2M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 1038.4419 621.4799 1183.3018 885.8274 524.902 820.4998 849.301 696.8976 858.298 520.9074 153159 amyA Carbon cycling Carbon degradation Starch Streptomyces venezuelae superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 849.0689 1719.1746 1223.803 681.1231 1885.2793 1173.1413 1473.1557 645.7024 1388.2736 887.3977 1280.3912 676.5082 119355986 narI Stress Oxygen limitation Chlorobium phaeobacteroides DSM 266 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium phaeobacteroides; 1976.1932 2740.3124 1916.4486 2618.4394 2342.8867 2724.6941 2178.6493 1930.1655 2536.9678 2801.5108 1479.6873 2825.7989 121552068 pimF Organic Remediation Aromatics Aromatic carboxylic acid Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 2838.0429 6826.0339 4884.9764 1848.8617 7776.3104 3225.2849 2775.074 4478.5324 3083.3828 2886.7834 1967.3748 3538.5241 145570144 nitro Organic Remediation Others Pseudomonas stutzeri A1501 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas stutzeri; 1125.0086 694.2144 1014.8997 1498.3312 903.1375 704.7253 833.1056 376.4329 917.843 900.4067 1121.012 729.325 94972084 AceB Carbon cycling Carbon degradation Others Deinococcus geothermalis DSM 11300 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus geothermalis; 1342.0477 3751.4083 2139.9643 2429.8434 2778.2727 1498.4083 2339.7821 2118.9008 218461097 pcc Carbon cycling Carbon fixation Rhizobium etli Kim 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 3186.5439 4251.8594 4106.3967 3127.6243 3259.4854 4876.7818 4212.659 4272.2151 4873.8567 4502.7815 3393.5473 4091.6631 219678850 glnA Stress Nitrogen limitation gamma proteobacterium NOR51-B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 746.3699 441.9894 605.2081 813.0851 523.0737 434.8989 697.7225 15860.9453 485.8072 676.8767 769.2197 614.2754 146401287 glycosyl_transferase_EPS Bioleaching EPS Acidiphilium cryptum JF-5 820.6328 1878.036 1131.2156 1023.6297 3408.4884 1549.95 1469.4394 1818.9575 1749.7401 2451.6498 1637.5963 24412837 metalloprotease_fungi Fungi function carbon degradation Microsporum canis superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma; 3537.3015 6080.4798 5747.3278 4256.9442 3928.0176 3891.7009 3484.9878 8089.5032 4000.501 4670.1777 9225.4477 5987.8945 13476731 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mesorhizobium loti MAFF303099 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium loti; 1664.6512 1150.9457 1851.6314 1175.0172 1094.89 1177.4533 1039.1397 1182.8213 1315.5864 1169.1447 86751345 iro virulence Iron oxidation Rhodopseudomonas palustris HaA2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 5845.6955 8472.491 6340.9895 6167.1051 9754.5546 6360.64 9267.336 4020.9788 8664.0595 6180.976 8461.5614 5185.8017 227076546 pcc Carbon cycling Carbon fixation Corynebacterium accolens ATCC 49725 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium accolens; 15428.3501 10169.9353 13991.536 18045.7631 7380.3215 11782.5038 8286.081 10597.109 10800.2997 12780.705 12197.099 10527.2733 194292224 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Cupriavidus taiwanensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus; 2687.9236 2588.8285 2847.66 1210.2859 1603.4079 2519.9251 2002.9426 3082.1472 2730.2195 2482.0002 1286.2052 3192.9084 120611836 pimF Organic Remediation Aromatics Aromatic carboxylic acid Acidovorax avenae subsp. citrulli AAC00-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax citrulli; 1221.0361 745.4182 686.1254 527.206 626.6165 1578.0321 628.2254 170693330 proO Organic Remediation Aromatics Other aromatics Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 1888.8362 1798.7009 1887.6033 896.9002 1911.7725 1577.2595 2187.2542 1783.557 1631.5746 2248.4249 302417550 cat_fun soil_benifit Verticillium albo-atrum VaMs.102 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Plectosphaerellaceae;genus:Verticilium;species:Verticillium albo-atrum; 1006.2269 863.5311 1295.032 1462.4299 941.5874 740.426 632.0497 812.5356 764.3508 744.2941 1592.4228 675.1784 21223143 linC Organic Remediation Pesticides related compound Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 1275.7593 3146.3981 11003.4681 4326.6466 5460.4694 3169.4992 4801.0943 2604.0065 3389.0132 3678.8222 4862.1953 3401.0656 83955301 pcaG Organic Remediation Aromatics Other aromatics Sulfitobacter sp. NAS-14.1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sulfitobacter; 1656.9276 2877.0269 3584.0268 1275.1437 1449.5134 1361.9345 2884.5787 3369.1637 2035.3604 2154.8233 2049.659 3122.1181 224818394 pilin virulence pilin Thioalkalivibrio sp. K90mix superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Thioalkalivibrio; 1219.9615 1066.7048 818.0205 1341.4123 1047.2991 1464.1057 1225.2308 943.3309 927.9431 781.7139 89160899 gyrB other category gyrB Lactobacillus brevis superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus; 1557.0182 1340.6825 988.9467 1772.268 872.5557 1529.3403 1800.4358 1768.9063 1188.9021 1301.2822 1154.6465 1247.0483 78698435 CODH Carbon cycling Carbon fixation Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 846.0064 2068.4098 874.9281 754.6788 1900.447 1306.5963 1059.1494 1467.6309 1353.2686 1465.6858 992.8351 222454334 CopA Metal Resistance Copper Halorubrum lacusprofundi ATCC 49239 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halorubrum;species:Halorubrum lacusprofundi; 2036.5646 2011.0173 2750.2455 1402.7772 2398.8173 1737.0083 1712.2756 3999.4211 1923.717 1821.9626 3013.0216 2167.2392 187250513 obgE Stress Radiation stress Elusimicrobium minutum Pei191 superkingdom:Bacteria;phylum:Elusimicrobia;class:Elusimicrobia;order:Elusimicrobiales;family:Elusimicrobiaceae;genus:Elusimicrobium;species:Elusimicrobium minutum; 4454.7005 1772.0562 2651.217 3943.0106 2579.9946 1912.8644 2170.2015 1882.1781 2195.743 3112.19 3860.0811 2869.9098 126360004 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 3502.9148 7857.8114 4654.0748 2418.7911 7933.5798 5011.0594 4887.5213 3205.2598 5134.7696 5726.1107 2993.177 3165.8968 37726849 dsrA Sulphur sulfite reductase uncultured prokaryote 1403.1378 3060.2776 1968.1956 1589.1457 3206.4556 2365.0228 2291.9924 1921.6743 1819.7036 2433.8728 1404.6225 2025.7961 224803028 pcc Carbon cycling Carbon fixation Opitutaceae bacterium TAV2 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae; 1697.7886 659.7331 596.4969 1462.5532 933.0177 447.6085 692.5379 646.1624 445.2223 672.2761 2100.3269 811.8839 224017048 fnr Stress Oxygen stress Bacteroides coprophilus DSM 18228 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides coprophilus; 1248.5589 1034.4406 1470.4363 1309.6067 1161.4006 856.6081 1036.041 956.1097 736.7512 743.4893 771.4833 56419238 amyA Carbon cycling Carbon degradation Starch Geobacillus kaustophilus HTA426 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus;species:Geobacillus kaustophilus; 4811.9593 4924.1056 6874.1088 2972.2122 3726.9897 4805.9937 4317.5772 6280.7981 5239.3188 4593.5424 2881.7752 6229.3915 307716687 coat_unassigned_Secoviridae soil_borne_pathogen structural Strawberry latent ringspot virus superkingdom:Viruses;order:Picornavirales;family:Secoviridae; 1661.3468 1330.1826 1741.4814 1676.8784 1896.2 1804.7902 1252.4571 1458.5164 1235.4629 1422.9518 3075.2453 2239.7598 218549937 nplT Carbon cycling Carbon degradation Starch Escherichia fergusonii ATCC 35469 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia;species:Escherichia fergusonii; 1016.0996 1432.5011 1109.1519 947.9737 1986.3274 1120.1013 1532.3804 1153.1579 1131.4262 1503.1344 1319.7435 1426.1731 67903810 ABC_multidrug_fungi Fungi function metal resistance Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 6723.8991 9018.4033 11651.9437 9336.7809 9021.2883 9540.7357 7558.2721 7623.8518 11348.4054 9943.4107 10637.5418 9947.6446 121714807 ChrA Metal Resistance Chromium Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 621.3951 635.3861 625.8041 655.6073 463.7544 493.7245 142853666 cat_bac soil_benifit Aeromonas salmonicida subsp. salmonicida A449 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas;species:Aeromonas salmonicida; 2659.6217 2628.1648 2101.1738 3118.9538 3194.3405 2757.087 2956.692 10632.9682 2496.437 2563.6717 2475.327 1434.1653 22778488 alkJ Organic Remediation Other Hydrocarbons Oceanobacillus iheyensis HTE831 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Oceanobacillus;species:Oceanobacillus iheyensis; 421.6825 338.5102 395.7836 229765280 fnr Stress Oxygen stress Streptosporangium roseum DSM 43021 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptosporangiaceae;genus:Streptosporangium;species:Streptosporangium roseum; 11868.7242 6826.0339 8085.7133 9200.4083 9889.654 8066.7935 8451.2523 6982.2609 9646.0881 8454.2865 6766.5536 7576.7684 187919819 ahpF Stress Oxygen stress Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 476.0837 534.8064 541.1033 729.8391 439.5691 119116128 bphC Organic Remediation Aromatics Polycyclic aromatics uncultured bacterium superkingdom:Bacteria; 1449.4389 2119.8388 1379.4046 1310.3874 2861.8281 1675.7623 1477.3424 2575.3534 1693.6505 1435.2684 1191.8605 1827.0478 151592184 ureC Nitrogen Ammonification Methylobacterium extorquens PA1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 5639.362 6548.7687 7414.1344 4923.6438 6664.656 5535.1277 4457.7434 5810.9465 5596.1956 5600.3764 4357.2943 5916.0468 260606365 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Vibrio coralliilyticus ATCC BAA-450 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio coralliilyticus; 748.5685 668.1049 1105.8442 903.8175 1011.1062 758.2681 483.2839 827.6956 1217.8396 253985313 SMR_antibiotics Antibiotic resistance transporter Methylovorus sp. SIP3-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Methylophilales;family:Methylophilaceae;genus:Methylovorus;species:Methylovorus glucosotrophus; 1986.1666 2615.3203 1332.5148 1597.2273 1616.9071 1330.8404 1014.771 1230.3025 1248.335 1019.9547 3167.0914 1002.228 219675063 alkK Organic Remediation Others gamma proteobacterium NOR5-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 1710.9523 1148.0915 1061.3897 1732.7642 1912.1261 1234.664 1581.7673 1616.8827 1193.1074 1365.6233 1446.3532 1428.5144 209546959 BADH Organic Remediation Aromatics Other aromatics Rhizobium leguminosarum bv. trifolii WSM2304 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 2548.671 1865.319 2170.3962 3040.8231 1860.0632 2730.39 3349.2606 2621.3376 2120.3394 2241.1399 2244.8109 2042.989 119695411 TerC Metal Resistance Tellurium Mycobacterium sp. KMS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 7047.1742 2948.1048 4224.3312 5848.9116 3507.4003 2664.7169 3370.102 2753.7583 3653.2579 5139.2356 7328.128 3965.9435 29293344 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 1589.9004 426.7875 894.4837 965.881 536.0955 828.9267 764.1201 944.3831 700.1713 192360117 ArsC Metal Resistance Arsenic Cellvibrio japonicus Ueda107 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Cellvibrio;species:Cellvibrio japonicus; 717.916 491.5071 448.1666 735.7625 837.2152 418.2794 927.0238 489.0852 447.8751 781.4963 716.911 76874226 sigma_70 Stress Sigma factors Pseudoalteromonas haloplanktis TAC125 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Pseudoalteromonadaceae;genus:Pseudoalteromonas;species:Pseudoalteromonas haloplanktis; 1388.1876 580.1303 1249.9676 611.3492 534.638 218989014 phenol_oxidase Carbon cycling Carbon degradation Lignin Cystoderma carcharias superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Agaricaceae;genus:Cystoderma; 1860.7224 3652.7681 3320.7603 2206.9726 2833.9197 3093.7829 3829.2896 3022.5458 3243.9026 4249.1021 1891.6973 3277.9528 85693864 mer Metal Resistance Mercury Idiomarina baltica OS145 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Idiomarinaceae;genus:Idiomarina;species:Idiomarina baltica; 2068.0365 1053.5035 2027.1532 1449.7734 1587.7663 1372.374 1713.0441 1147.6787 1275.9779 1354.9705 1325.7737 2219.0789 297546143 cat_bac soil_benifit Ktedonobacter racemifer DSM 44963 superkingdom:Bacteria;phylum:Chloroflexi;class:Ktedonobacteria;order:Ktedonobacterales;family:Ktedonobacteraceae;genus:Ktedonobacter;species:Ktedonobacter racemifer; 693.2677 579.1368 655.8923 548.4036 306.8409 695.8262 405.7664 507.7793 160361326 alkH Organic Remediation Other Hydrocarbons Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 11797.4792 6031.8032 8975.1227 9434.3483 5341.8871 5857.331 5747.0084 7060.5674 7567.9878 9470.5339 6066.7169 6347.1464 227015885 vanA Carbon cycling Carbon degradation Others Pseudomonas nitroreducens superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1771.4111 1132.9151 1302.0691 1688.6857 1318.5219 1534.2908 2063.7348 1951.124 1124.9145 2224.6024 1106.1888 1397.7059 71369384 CopA Metal Resistance Copper Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 1681.3744 2102.1648 1424.1862 2509.3729 931.7268 1965.7647 1815.3585 1205.404 1887.0228 2065.6927 954.089 2156.8576 158110300 pcc Carbon cycling Carbon fixation Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 6666.8655 11038.4933 7152.729 7455.7409 6508.5052 8604.2029 15122.7381 4961.8802 10444.8091 6571.0201 8433.9572 5950.9956 222525449 sigma_70 Stress Sigma factors Chloroflexus sp. Y-400-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus; 9074.3362 17037.2169 10756.9075 14394.318 4033.8498 14287.7867 18372.0701 13624.3634 14597.3054 13404.2731 10523.2568 6238.1665 118592910 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 625.757 1894.0916 1272.3213 945.8826 1542.1117 891.9631 1188.1206 1009.6295 1017.5113 1239.5317 907.9618 1182.3415 84500768 xylA Carbon cycling Carbon degradation Hemicellulose Oceanicola batsensis HTCC2597 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola batsensis; 1872.0055 3872.144 2234.6317 1964.8141 2623.2034 2699.3707 2692.3148 2453.3545 3053.9317 3240.0793 1531.136 1987.9222 156235625 hrcA Stress Heat shock Roseiflexus castenholzii DSM 13941 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus;species:Roseiflexus castenholzii; 918.0169 881.3946 456.8133 399.6248 391.3682 637.4033 138896077 dnaK Stress Heat shock Geobacillus thermodenitrificans NG80-2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus;species:Geobacillus thermodenitrificans; 389.3642 471.0134 109452555 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 7550.9122 9620.9096 10801.6165 3890.8915 4165.0687 10135.7566 7920.1119 11596.5588 10221.7553 8212.3095 3866.4716 9177.8641 116694335 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 6784.0489 3620.1982 5948.2926 6830.6954 4363.594 4380.7266 4159.873 4051.7116 6154.4825 5479.7453 7932.2266 5920.9081 254442050 amyA Carbon cycling Carbon degradation Starch Verrucomicrobiae bacterium DG1235 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales; 733.0408 634.8255 1089.3012 836.8492 734.2112 625.6093 481.3573 648.8154 974.4979 1323.2079 209885826 pstB Stress Phosphate limitation Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 963.942 1593.3291 1676.6789 979.195 2709.128 1125.3261 1201.6899 1470.306 1341.1304 1468.4439 746.06 1226.4772 240170041 pstB Stress Phosphate limitation Mycobacterium kansasii ATCC 12478 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium kansasii; 6096.7854 4968.471 4183.1893 5429.9226 4987.3311 4653.7836 4272.1666 6326.6612 4423.5205 4413.9077 7492.5851 4580.2616 70986018 exoglucanase_fungi Fungi function carbon degradation Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 2022.9443 698.343 1406.3754 1835.8793 1035.475 1075.7908 940.444 2088.3259 1183.3339 1222.1902 2014.8234 1342.0899 255325506 obgE Stress Radiation stress Corynebacterium tuberculostearicum SK141 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium tuberculostearicum; 2514.8081 1663.6043 2371.6373 2449.1448 1159.3925 2337.5781 1923.6833 2811.1568 1841.2425 2412.3439 2012.97 171911085 pstB Stress Phosphate limitation Verrucomicrobium spinosum DSM 4136 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobiaceae;genus:Verrucomicrobium;species:Verrucomicrobium spinosum; 2555.7632 977.0142 1051.3212 2614.2959 1316.0193 1541.3202 1074.1467 1145.742 998.576 1495.8911 1859.7445 1342.2066 259039642 cat_bac soil_benifit Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella pneumoniae; 1604.0446 582.6279 796.0223 1677.166 876.5752 854.019 656.4641 1167.3118 685.4234 1132.3896 1607.8946 1175.6401 94499906 pstB Stress Phosphate limitation Oceanobacter sp. RED65 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Oceanospirillaceae;genus:Bermanella; 1015.9921 432.7637 330.9198 676.8358 643.021 588.9697 433.7997 678.0072 212541757 endoglucanase Carbon cycling Carbon degradation Cellulose Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 1211.1499 436.0577 564.2211 834.7396 620.9995 604.2745 620.2471 317.9534 923.4816 19909709 gyrB other category gyrB Ralstonia sp. superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 551.557 1207.7139 718.5174 779.9384 1287.0933 870.0168 523.3311 877.3047 866.684 1132.548 83757783 amyA Carbon cycling Carbon degradation Starch Salinibacter ruber DSM 13855 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Rhodothermaceae;genus:Salinibacter;species:Salinibacter ruber; 1747.1255 1665.9999 1705.4526 1088.8072 1981.044 1904.4515 1836.4064 2329.2575 2058.1108 1726.7854 1056.2416 1686.6757 148242895 alkK Organic Remediation Others Synechococcus sp. RCC307 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 1299.9852 1393.0246 640.0272 632.5088 120609111 AceB Carbon cycling Carbon degradation Others Acidovorax avenae subsp. citrulli AAC00-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax citrulli; 2873.5311 2428.1449 3068.762 2686.9065 3945.8775 2548.3271 2278.3084 2455.4485 2116.7632 2275.7448 4237.0992 3605.8675 167647574 ara Carbon cycling Carbon degradation Hemicellulose Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 5141.6819 5028.0594 5288.8833 6039.0607 4103.3744 5334.3844 5321.0271 15569.5926 4496.3496 4423.857 7012.5175 8873.4729 133738387 sigma_38 Stress Sigma factors Herminiimonas arsenicoxydans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Herminiimonas; 1111.6569 1139.7961 1792.9803 1013.0552 702.1083 1723.8917 1182.0184 1239.9375 1571.9774 1321.8843 1748.5125 186473234 ChrA Metal Resistance Chromium Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 956.4602 1540.0525 884.4078 668.6584 1044.7842 1183.6855 1669.5031 969.7217 901.2782 639.8487 1058.5 969.0781 163670351 linB Organic Remediation Pesticides related compound Chloroflexus aurantiacus J-10-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aurantiacus; 3967.135 1275.1602 1656.7162 3281.3106 1236.2944 565.5679 1402.7171 1049.6704 707.6379 1294.5488 3079.6178 1272.6729 118439399 nhh Organic Remediation Aromatics Nitoaromatics Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 866.6921 1280.7925 758.5856 911.1594 962.0637 784.6667 786.9723 1671.7453 731.8677 987.3523 2010.8593 1031.4367 58426136 sigma_24 Stress Sigma factors Xanthomonas oryzae pv. oryzae KACC10331 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas oryzae; 2317.4407 5081.2531 3366.2945 2895.0062 5368.5538 3624.5027 4657.3031 1452.6095 931.414 3958.472 3084.1221 2436.598 28900726 Arylest Organic Remediation Aromatics Other aromatics Vibrio parahaemolyticus RIMD 2210633 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio parahaemolyticus; 1212.7753 2420.2445 2487.1099 1334.454 2404.9792 2107.6251 1533.5924 2019.2832 1801.9856 1783.0363 1087.8821 1757.823 212707618 ArsC Metal Resistance Arsenic Providencia rustigianii DSM 4541 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia rustigianii; 762.3097 1244.1831 1084.3258 652.3857 1542.1876 637.6567 1525.9991 784.5868 892.6813 755.4996 1213.795 920.5892 219860405 katE Stress Oxygen stress Arthrobacter chlorophenolicus A6 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter chlorophenolicus; 2276.5326 2198.4348 3175.3073 1423.077 733.0894 3007.1112 2426.8364 3280.04 2642.9922 2664.5829 1189.4101 3548.4938 115390368 RgaE_fungi Fungi function carbon degradation Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 2258.3587 4332.4943 2679.191 3384.631 4301.7859 4332.8067 3790.3941 4101.6659 1817.6534 2722.9387 4658.9232 4085.6346 22750432 Pg_Oomycetes soil_borne_pathogen oomycete carbon degradation Phytophthora cinnamomi superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 1334.09 624.2383 631.6193 348.5119 590.4595 20467215 mmoX Carbon cycling Methane Methane oxidation uncultured type I methanotroph superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae; 1261.4808 998.8509 867.5764 197209502 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1681.549 870.0999 1281.1904 1609.8838 1084.239 1082.0575 844.7708 938.299 799.9791 1116.0755 1877.8831 1629.9336 206685403 pstB Stress Phosphate limitation Rhodobacterales bacterium Y4I superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales; 1351.1682 1587.9135 2021.541 790.0321 663.1528 1632.5985 1347.6829 2098.5782 1899.3707 1624.2829 1676.7747 153832734 pilin virulence pilin Vibrio harveyi HY01 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio harveyi; 940.8653 508.4929 795.51 469.078 614.8692 190343178 ppx Phosphorus Phosphorus utilization Candidatus Nitrospira defluvii superkingdom:Bacteria;phylum:Nitrospirae;class:Nitrospira;order:Nitrospirales;family:Nitrospiraceae;genus:Nitrospira; 2079.239 959.9731 1096.0882 1324.4 902.872 995.341 1108.2534 1212.7513 969.1799 1606.2491 1015.8323 1056.1412 118424400 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 455.3172 518.5965 461.5922 936.2029 485.2939 426.5957 466.2551 296421794 ABC_multidrug_fungi Fungi function metal resistance Tuber melanosporum Mel28 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Pezizomycetes;order:Pezizales;family:Tuberaceae;genus:Tuber;species:Tuber melanosporum; 1933.6598 1787.36 2326.1723 2736.2861 2105.9115 1210.1282 2000.6371 1368.4364 1313.5224 1476.1935 2259.7302 2340.4866 21219061 linB Organic Remediation Pesticides related compound Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 5199.4677 6103.5565 3957.2554 5738.4685 2866.7197 7325.0913 4401.6425 4524.3471 4501.0675 5511.2235 4015.8806 5744.7083 255932517 ABC_multidrug_fungi Fungi function metal resistance Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 1508.3664 1226.6818 1233.0334 669.5057 158108159 TerZ Metal Resistance Tellurium Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 2706.1109 4364.0364 2801.0974 2740.7789 6020.2498 2553.1206 4206.9124 2313.6469 3063.117 2633.9979 2299.0104 2377.4129 262307598 sid_bac soil_benifit Acinetobacter lwoffii SH145 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter;species:Acinetobacter lwoffii; 603.7683 420.2257 372.3341 615.6661 369.8481 314.4918 530.8771 256653814 phoB Stress Phosphate limitation Acetobacter pasteurianus IFO 3283-12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Acetobacter;species:Acetobacter pasteurianus; 904.9742 531.0601 1335.4808 1031.5332 493.2313 806.8708 682.22 615.852 805.6632 262352243 CysJ Sulphur sulfite reductase Vibrio sp. RC586 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 17589.4798 1008.6583 769.1514 1513.1868 689.1689 663.8476 445.8092 928.5028 258584767 hly virulence hemolysin Vibrio mimicus VM573 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio mimicus; 902.1937 2530.9391 1476.0631 1057.49 2530.9842 1677.4823 1569.0698 1917.2562 1959.3627 2060.4779 1789.1602 11037223 pcaG Organic Remediation Aromatics Other aromatics Agrobacterium tumefaciens superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium; 3214.2413 5200.5235 4657.5934 3721.186 2805.3762 5039.3866 4990.5183 4827.317 5265.8901 5266.4382 1620.2552 5850.8731 90023478 phoB Stress Phosphate limitation Saccharophagus degradans 2-40 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Saccharophagus;species:Saccharophagus degradans; 6441.2432 3375.9616 2644.1508 2681.6563 4262.8241 4524.7557 5114.3451 5367.1071 3049.61 4805.7496 4347.4442 3726.9182 217331421 aoxB Metal Resistance Arsenic Ochrobactrum tritici superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum; 1509.8056 1287.5651 1539.1136 1496.8792 781.3035 1189.4512 1425.8353 1661.8077 1385.0294 1358.901 748.6306 1237.4151 213923821 ppk Phosphorus Phosphorus utilization Pseudomonas syringae pv. tomato T1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 2423.7909 3807.3099 2474.0534 3063.0953 3054.2106 4542.6883 3865.4268 3272.9667 3040.6019 5593.4803 3605.4693 91691216 nmoA Organic Remediation Aromatics Nitoaromatics Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 1983.0503 3962.2466 2925.2863 1944.4458 4963.5116 3088.3538 2553.33 2827.7396 3222.9229 2682.6613 2095.8423 3070.9788 242373631 katE Stress Oxygen stress Staphylococcus epidermidis M23864:W1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Staphylococcaceae;genus:Staphylococcus;species:Staphylococcus epidermidis; 4633.5918 2566.5035 3225.0615 4581.0413 3879.5381 2518.6987 2715.1979 2566.711 2029.8854 2413.3266 6566.789 2765.3517 229541805 proV Stress Osmotic stress Bacillus coagulans 36D1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus coagulans; 865.2146 609.6548 9580.8564 1770.0054 567.5014 1186.5262 558.2975 411.6065 657.3611 604.5804 150036090 sox Sulphur Sulphur oxidation Chlorobium limicola superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium; 772.0526 738.3514 1055.9134 819.2755 743.9246 694.7193 747.0131 1210.1192 866.4259 83853339 pcc Carbon cycling Carbon fixation Oceanicaulis alexandrii HTCC2633 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Oceanicaulis; 983.1367 2031.9669 959.862 523.1871 726.6679 90420336 trzN Organic Remediation Herbicides related compound Aurantimonas sp. SI85-9A1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Aurantimonas;species:Aurantimonas manganoxydans; 8148.5957 6194.857 6083.4807 7151.9572 3347.6979 6205.1096 4652.0605 5199.3782 5101.5235 5321.4609 5512.157 5671.2814 77019718 pstB Stress Phosphate limitation Rhodococcus erythropolis PR4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus erythropolis; 866.4638 1363.9376 783.1694 612.7168 629.2513 633.8562 1755.3616 543.0369 699.3547 1254.2283 99037959 glnA Stress Nitrogen limitation Ruegeria sp. TM1040 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 998.5167 717.3549 709.7595 1151.9245 1022.023 545.6846 783.3522 1493.7315 702.8498 251774068 pcc Carbon cycling Carbon fixation Geobacter sp. M21 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 712.1804 1014.8808 955.3169 829.0016 823.9041 757.2762 1593.4096 736.8839 1104.6453 881.2339 1056.634 914.6568 197119301 nrfA Nitrogen Dissimilatory N reduction Geobacter bemidjiensis Bem superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter bemidjiensis; 2267.7009 1936.4798 2126.5451 2347.1874 2513.9017 2178.4955 1443.8206 1672.9679 1766.7009 1725.9925 3403.5175 2349.7078 169157706 pat1 soil_borne_pathogen enzyme protease Clavibacter michiganensis subsp. sepedonicus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Clavibacter;species:Clavibacter michiganensis; 3252.295 4011.4753 6078.5664 1952.9246 1535.9689 3995.0339 4165.8032 5311.4758 4269.5449 4483.1508 2224.9185 4656.5295 283439430 sigma_24 Stress Sigma factors Pirellula staleyi DSM 6068 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Pirellula;species:Pirellula staleyi; 5743.8921 3113.6689 3161.3058 3749.5194 3593.4008 2291.9614 2827.7896 3638.1933 2878.8832 2395.4379 5035.0764 2797.0322 15788813 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 1304.7193 835.7332 2365.6034 1285.8818 972.8818 2472.4066 1376.7062 6060.537 1806.6278 242220117 phenol_oxidase Carbon cycling Carbon degradation Lignin Postia placenta Mad-698-R superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Postia;species:Postia placenta; 1069.5198 653.3873 661.1395 1225.408 590.3054 757.425 655.9184 719.613 864.4023 1005.1893 63029761 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 4189.9231 2036.9357 2745.1421 3445.0782 1075.7261 4191.4399 5264.3413 4601.5239 2865.9296 4533.3217 1458.846 1270.3384 120607213 pimF Organic Remediation Aromatics Aromatic carboxylic acid Acidovorax sp. JS42 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax; 1591.8884 801.4685 1135.9991 1467.5939 707.7772 818.2525 1050.9481 714.846 1022.9397 1163.678 749.4679 113528035 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 2967.3378 1079.1543 1760.47 2337.8388 1946.367 1471.4445 1420.84 1213.4775 2303.5422 2131.5412 20818.9987 1858.742 256375271 amyA Carbon cycling Carbon degradation Starch Actinosynnema mirum DSM 43827 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinosynnemataceae;genus:Actinosynnema;species:Actinosynnema mirum; 5217.4938 4989.717 4308.195 6661.8049 3726.7053 3148.7622 3995.1835 2930.057 3628.0146 4696.5864 4107.5585 3435.2157 159186182 xylA Carbon cycling Carbon degradation Hemicellulose Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 1515.5124 2685.7356 1899.5111 1798.8549 1055.2878 1758.5304 2568.5969 2477.1031 2339.6423 2708.5787 1556.1216 1941.8502 158331693 nmoA Organic Remediation Aromatics Nitoaromatics Azorhizobium caulinodans ORS 571 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Azorhizobium;species:Azorhizobium caulinodans; 2671.5899 1277.0207 2873.2059 2486.0186 1727.8204 1395.4815 1720.5915 1267.8015 1390.8015 1915.2918 1158.6344 1913.3281 148657565 hrcA Stress Heat shock Roseiflexus sp. RS-1 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus; 9534.4595 3149.1951 6565.8136 7651.2045 5732.1691 6513.4185 4735.8735 4154.1742 6767.3447 6200.9863 9193.3749 6881.8017 169155556 TerC Metal Resistance Tellurium Clavibacter michiganensis subsp. sepedonicus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Clavibacter;species:Clavibacter michiganensis; 6584.9531 10621.0472 12675.2764 4886.1669 12859.6842 5649.4795 9761.4275 15748.4695 5482.5033 11491.7729 18748.0077 13087.3264 157406278 nhh Organic Remediation Aromatics Nitoaromatics Methylobacterium populi BJ001 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 1335.6539 2020.6507 1618.172 1101.6371 2330.3734 1504.5427 1345.9165 1758.3271 1545.4993 1361.7113 1285.6767 1419.4579 219945439 CopA Metal Resistance Copper Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 5289.276 5205.2064 6893.1556 2687.1667 1871.7233 5780.2314 4101.7305 6157.7703 5998.7479 5189.8419 1920.9833 6008.6578 121555473 obgE Stress Radiation stress Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 2498.0849 13612.0053 11051.1577 18466.4415 32826.9444 22578.9843 4852.9386 9186.3924 7234.2341 16195.7738 33284.5265 25639.5444 118053493 mhpA Organic Remediation Aromatics Aromatic carboxylic acid Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 7071.9433 3269.9945 4543.8073 6304.5598 5845.4523 3536.0553 3421.9818 2501.469 4143.5034 3822.633 5872.55 3601.9676 89099726 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bacillus sp. NRRL B-14911 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 2648.9028 1477.3336 2235.9548 2931.4484 2370.5487 1357.4626 1932.2516 1525.7799 1035.6953 1748.7665 2796.8723 2322.3416 114315506 vanA Carbon cycling Carbon degradation Others Granulibacter bethesdensis CGDNIH1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Granulibacter;species:Granulibacter bethesdensis; 554.7942 945.4466 719.0105 579.5818 787.9014 708.4873 825.7465 659.1667 695.0077 397.2618 77974163 SilA Metal Resistance Silver Yersinia frederiksenii ATCC 33641 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia frederiksenii; 1759.6578 1749.247 1371.4661 1694.9112 2399.5188 1570.642 1724.3652 1197.7178 1677.7556 1846.272 2172.7851 2357.1164 124483586 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Herbaspirillum seropedicae superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Herbaspirillum; 4326.3415 2945.0849 4658.015 5972.7098 2426.4666 3283.0248 2541.7107 3241.4516 3702.4979 4657.5149 4089.8764 4332.6658 254476185 sox Sulphur Sulphur oxidation Ruegeria sp. R11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 1504.6859 1833.8448 2004.6073 1120.1836 1480.8914 1063.751 1205.9339 2942.4155 1438.1194 1591.9672 1429.512 1905.7341 153005821 AceB Carbon cycling Carbon degradation Others Anaeromyxobacter sp. Fw109-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter; 2886.191 4139.4318 5354.6163 3655.9858 3679.3159 5568.1362 4998.4786 4909.8924 6072.8061 6090.4105 2511.0396 5726.8516 1799532 nagG Organic Remediation Aromatics Aromatic carboxylic acid Sphingomonas sp. superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 611.9118 1448.2806 866.0134 540.0652 2252.2222 1200.4365 1291.8688 1790.694 1193.6432 1405.9788 1195.7442 76803774 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 984.4262 877.5925 860.5368 1014.0917 976.5559 880.84 1901.4753 963.2281 254461693 sox Sulphur Sulphur oxidation Rhodobacterales bacterium HTCC2083 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 3432.9862 5453.4441 4777.1007 5040.1686 5952.8581 4694.5993 5408.4647 5777.2361 6262.7536 5556.8608 2724.354 5261.206 114046494 iro virulence Iron oxidation Shewanella sp. MR-7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella; 532.8086 698.6106 14275996 pheA Organic Remediation Aromatics Other aromatics uncultured microorganism PCRTD03 superkingdom:Bacteria; 1089.2519 1375.5716 1336.106 1272.6644 1307.4875 1556.8748 1370.0499 1844.098 1155.9822 2483.999 1395.0126 1666.8599 209401908 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 491.5175 1106.923 654.6134 686.7279 850.4715 701.2989 679.8134 936.1617 217501990 gyrB other category gyrB Methylocella silvestris BL2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Methylocella;species:Methylocella silvestris; 2931.1422 1882.3303 2107.7601 3228.8628 2138.2564 1953.1715 1901.282 1570.251 1911.008 2486.6455 2683.5963 2757.5517 167754493 sigma_70 Stress Sigma factors Alistipes putredinis DSM 17216 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Rikenellaceae;genus:Alistipes;species:Alistipes putredinis; 897.5932 853.9551 1015.0825 1062.7768 549.7293 1044.651 665.9045 691.4867 636.309 548.427 169793622 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 537.9397 1049.2347 558.2563 694.8531 780.8379 449.3129 1074.3873 666.5987 634.1985 716.5265 184195160 katE Stress Oxygen stress Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 1339.8179 772.6831 906.598 1235.4757 952.4613 706.0219 797.7192 744.255 640.8866 145224138 SMR_antibiotics Antibiotic resistance transporter Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 3926.6366 5273.8251 5809.1206 3629.4332 3875.4618 5437.9118 3410.2134 5015.7079 5684.0169 5084.3525 4307.6114 5205.1369 159184775 sigma_24 Stress Sigma factors Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 1295.1429 1041.7676 1010.4361 1244.79 1071.5361 1087.7858 1408.6242 958.2832 806.5374 1179.7466 1273.7028 158306363 nirA Nitrogen Assimilatory N reduction Acaryochloris marina MBIC11017 superkingdom:Bacteria;phylum:Cyanobacteria;genus:Acaryochloris;species:Acaryochloris marina; 2146.602 1856.9344 1986.8498 1755.2967 3043.9914 2438.6078 1461.4332 1821.8867 2258.0298 1650.2561 1195.0851 13472330 MFS_antibiotic Antibiotic resistance transporter Mesorhizobium loti MAFF303099 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium loti; 20339.113 32291.1641 27087.1198 30916.866 18214.805 34018.3161 23635.5817 26728.1704 36995.1697 30862.7043 21198.0608 31146.9989 115421723 CopA Metal Resistance Copper Bordetella avium 197N superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella avium; 5387.7079 1548.3989 4193.9001 4638.9545 2011.7584 2427.6598 3195.8348 2465.2288 2827.5463 3186.1007 3313.9298 2946.5226 15074184 P450 Energy process Energy process Sinorhizobium meliloti superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium; 2682.0805 4284.0216 2026.2663 3141.1712 1573.4708 5020.9604 3514.9824 2435.9848 3505.6542 3711.2142 984.7444 3725.49 113954287 sigma_70 Stress Sigma factors Synechococcus sp. CC9311 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 626.6203 562.2539 901.7971 595.1712 759.7879 1002.4505 642.6855 3372194 nifH Nitrogen Nitrogen fixation unidentified bacterium superkingdom:Bacteria; 526.8043 541.107 237846178 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 6544.4033 8963.7505 9382.0974 6870.4456 9659.5042 6109.853 6418.7164 9807.6805 7486.4219 9935.1922 5338.1708 9194.6588 194017634 TerD Metal Resistance Tellurium Bacillus pumilus ATCC 7061 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus pumilus; 762.3141 595.9056 605.0607 839.7131 529.0936 832.7959 578.5963 526.462 550.6065 843.672 756.6936 71841647 narI Stress Oxygen limitation Pseudomonas stutzeri superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas stutzeri; 10281.9669 10015.3554 10485.5862 12236.3825 17015.0646 9131.1577 12163.9011 8794.7708 9853.7537 8135.6072 12610.8747 9353.8716 71383949 nasA Nitrogen Assimilatory N reduction uncultured bacterium superkingdom:Bacteria; 592.1494 1509.292 1080.8944 1128.2651 1403.8121 1446.0287 3297.0263 1130.5409 1225.5848 1503.6759 861.9383 157146778 ahpF Stress Oxygen stress Citrobacter koseri ATCC BAA-895 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter;species:Citrobacter koseri; 3572.9911 3378.8797 3490.2762 3368.2488 3402.8006 3284.0718 4493.4043 5803.6598 3108.4138 2973.793 5115.1023 3093.9668 99083067 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 578.2672 551.8864 518.638 493.3575 569.5878 500.8475 590.0833 582.5775 580.8117 10762.733 561.1244 158524008 dsrA Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 605.3031 942.1208 1213.5963 660.1522 896.9551 571.3709 978.3187 1240.6879 835.2637 1536.8273 1359.3103 295411379 sir Sulphur sulfite reductase Bacillus tusciae DSM 2912 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Alicyclobacillaceae;genus:Kyrpidia;species:Kyrpidia tusciae; 1831.9101 912.6346 975.3087 1750.8861 1345.0653 987.1898 1236.3644 735.6493 778.9722 840.2863 1165.8179 1023.6642 256686366 proV Stress Osmotic stress Jonesia denitrificans DSM 20603 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Jonesiaceae;genus:Jonesia;species:Jonesia denitrificans; 763.0216 668.3088 590.4504 764.4988 839.2234 1130.9415 689.9314 648.2983 497.3982 1012.3625 154156095 sigma_32 Stress Sigma factors Parvibaculum lavamentivorans DS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Parvibaculum;species:Parvibaculum lavamentivorans; 726.7855 1002.3167 1128.3513 575.1591 849.1976 782.2737 1064.8845 1136.107 1198.9668 1177.3011 1063.7489 256577271 dsrB Sulphur sulfite reductase Desulfomicrobium baculatum DSM 4028 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfomicrobiaceae;genus:Desulfomicrobium;species:Desulfomicrobium baculatum; 1980.928 1093.2603 1018.7818 1687.9186 1227.5351 1682.3132 2279.6619 952.7394 781.463 978.8063 1081.6596 2167.2118 18034308 dsrB Sulphur sulfite reductase Desulfonatronum lacustre superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfonatronumaceae;genus:Desulfonatronum; 402.0578 429.1958 569.639 475.4719 786.1235 387.5204 420.7467 530.4806 56180218 pstC Stress Phosphate limitation Idiomarina loihiensis L2TR superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Idiomarinaceae;genus:Idiomarina;species:Idiomarina loihiensis; 2421.696 1279.5564 1027.8544 981.8797 1586.9131 1128.6314 966.8025 1020.838 1162.9832 1049.6611 1204.6176 987.9738 23978276 gyrB other category gyrB Pleurocapsa sp. PCC 7327 superkingdom:Bacteria;phylum:Cyanobacteria;order:Pleurocapsales;genus:Pleurocapsa;species:Pleurocapsa minor; 1278.2174 1416.386 949.4139 1628.6494 1584.8086 1408.9421 15711.1178 907.6631 869.6164 1183.733 1932.5151 1155.3849 196201459 gyrB other category gyrB Cyanothece sp. PCC 7822 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 662.6421 723.3694 1007.1502 912.6327 588.0442 833.827 978.9184 809.7351 774.6692 110633336 SMR_antibiotics Antibiotic resistance transporter Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 1050.0759 578.832 1160.5091 671.2033 504.7681 1275.5141 221532705 sigma_24 Stress Sigma factors Rhodobacteraceae bacterium KLH11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 1842.9783 2585.9742 2571.0318 2000.003 4731.0298 2757.7002 2000.8895 2722.4204 2582.7789 3464.7148 25767.6341 2324.9827 209874334 AceA Carbon cycling Carbon degradation Others Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 480.1671 570.7012 11421.6376 82798482 gyrB other category gyrB Acholeplasma cavigenitalium superkingdom:Bacteria;phylum:Tenericutes;class:Mollicutes;order:Acholeplasmatales;family:Acholeplasmataceae;genus:Acholeplasma; 503.4425 591.3438 782.8786 552.9006 836.2293 744.6885 640.7843 559.52 496.1631 810.4051 1089.78 886.327 218515847 nagL Organic Remediation Aromatics Aromatic carboxylic acid Rhizobium etli 8C-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 4022.3417 10498.9863 7613.2091 5312.0782 9535.907 7560.3138 7105.049 6047.4156 7973.7668 7154.0204 4393.8597 9839.5573 3378416 xylF Organic Remediation Aromatics BTEX and related aromatics Novosphingobium aromaticivorans superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium; 1719.7773 708.8683 944.2087 1174.8504 615.8994 524.4234 732.8673 660.3486 791.8132 15389.8058 733.7834 816.8825 78036584 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Xanthomonas campestris pv. vesicatoria str. 85-10 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas euvesicatoria; 2936.045 5190.9602 3878.9457 3903.1508 2281.9191 5618.2847 6319.6137 3192.7319 4077.9082 3705.0168 4097.276 3673.1561 312173667 impJ soil_borne_pathogen secretion system type IV Erwinia amylovora ATCC BAA-2158 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Erwinia;species:Erwinia amylovora; 413.744 636.5671 479.3829 450.9218 778.4406 620.5364 632.2045 729.9456 554.2691 492.7974 121583395 TerD Metal Resistance Tellurium Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 828.1865 559.4109 701.3557 842.8361 655.7523 623.4379 470.3609 459.9649 487.891 902.4725 942.5092 846.1461 83309233 linC Organic Remediation Pesticides related compound Magnetospirillum magneticum AMB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magneticum; 3307.804 3039.5199 2900.671 2274.3645 2879.7449 2860.1433 2467.7851 2835.3412 2599.8737 2698.7801 2995.6278 3286.5973 49609584 xylA Carbon cycling Carbon degradation Hemicellulose Erwinia carotovora subsp. atroseptica SCRI1043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium atrosepticum; 1076.3568 1794.3047 1601.2045 2189.1795 2470.1356 3182.4147 1238.3639 1795.0312 1245.2825 1397.5592 1207.1009 121711237 tre_fun soil_benifit Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 1463.4622 703.8096 821.7308 1618.4174 804.4644 784.9016 1173.6979 790.9833 186471716 phtA Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 389.4045 393.0833 442.6246 288.0657 568.0596 206591648 iro virulence Iron oxidation Ralstonia solanacearum superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 921.0929 416.1601 500.6834 515.9987 356.3694 653.8643 4753.2335 630.9491 1048.6979 675.6567 51891570 obgE Stress Radiation stress Symbiobacterium thermophilum IAM 14863 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XVIII. Incertae Sedis;genus:Symbiobacterium;species:Symbiobacterium thermophilum; 8253.1661 9609.6197 6597.4806 9021.8474 5898.6907 11909.8715 14003.7486 11510.8969 8761.3747 8763.2398 8297.9299 6705.1625 116180228 amyA_fungi Fungi function carbon degradation Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 1829.3714 2297.3808 2784.2533 2053.396 1861.9781 2144.0138 2508.8714 3265.1638 2605.238 2319.7517 2645.3491 2680.1562 161379865 CopA Metal Resistance Copper Oceanibulbus indolifex HEL-45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 1830.92 7140.6731 3021.8747 2036.6271 10762.3614 3204.4958 2905.0836 4983.68 3406.3487 6102.554 2138.1657 2548.887 256673164 grpE Stress Heat shock Streptomyces sp. AA4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 3801.6625 6760.5372 5744.2454 4175.1563 7045.7426 5345.5119 5574.9206 6729.794 5238.4568 7168.28 3085.624 6961.7926 254391488 amyA Carbon cycling Carbon degradation Starch Streptomyces clavuligerus ATCC 27064 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces clavuligerus; 1459.4594 1384.0199 1252.6348 1207.1355 2701.184 20719.4819 1295.3672 1606.5517 1831.8185 2147.8331 1159.6694 118589379 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 17838.713 1357.1204 1128.3077 1283.1704 1407.3284 1367.5731 823.9409 1016.9647 1009.4269 1043.6387 1964.7801 1152.4324 218667876 SMR_antibiotics Antibiotic resistance transporter Acidithiobacillus ferrooxidans ATCC 23270 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus;species:Acidithiobacillus ferrooxidans; 595.0642 891.7368 749.2633 855.9271 824.09 542.4076 837.0892 824.5451 134134413 amyA Carbon cycling Carbon degradation Starch Burkholderia vietnamiensis G4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia vietnamiensis; 2769.8875 3040.1316 3329.6731 2382.3557 2692.1972 3553.5542 2362.2819 3304.7811 3504.5126 2915.4036 2460.0473 3442.5075 iegcoxL103 CODH Carbon cycling Carbon fixation 1030.5855 737.8959 1181.7677 796.5511 875.8666 646.516 849.9118 827.9617 126736898 phn Organic Remediation Herbicides related compound Roseobacter sp. SK209-2-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 414.6305 1020.7424 540.7979 683.1504 1094.6208 734.5534 715.3625 943.3076 1034.3147 870.3974 242782750 tre_fun soil_benifit Talaromyces stipitatus ATCC 10500 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus; 5032.5445 4125.2087 6521.7008 5221.9759 9032.1142 6456.9286 5707.5967 5933.1028 8741.5832 3362.8314 5976.2643 6963.5229 219674599 grpE Stress Heat shock gamma proteobacterium NOR5-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 995.6556 1983.2003 1317.8444 1184.6989 1113.1902 1862.1924 1616.6942 1585.7081 2130.5322 1977.4442 890.5439 2008.0813 197712962 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Streptomyces sviceus ATCC 29083 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces sviceus; 2872.9803 2051.87 2932.8033 3066.1088 3918.7654 2369.2555 2413.1065 1782.5236 2840.6164 2732.2404 3784.4757 2970.0598 88935953 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Geobacter uraniumreducens Rf4 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter uraniireducens; 860.7416 784.2533 1040.4892 1194.9173 923.1583 1093.0763 733.1142 1029.1335 801.5984 78198479 fnr Stress Oxygen stress Synechococcus sp. CC9605 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 687.2098 485.2632 716.0987 691.8031 660.903 632.1612 493.4125 653.8515 571.8268 118592546 nreB Metal Resistance Nickel Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 1861.4075 2902.6394 3937.6126 1754.2694 3465.4239 2414.4982 1823.2615 3251.1108 2980.1124 3042.8463 1822.3381 3726.3689 259503187 sigma_70 Stress Sigma factors Lactobacillus antri DSM 16041 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus antri; 921.6033 584.1548 859.5458 824.4098 465.2718 638.9376 548.3837 810.5167 1001.2973 904.6871 134142921 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 1378.9059 1098.1426 1771.2784 1004.7328 641.9593 1220.8279 749.9485 111151378 nmoA Organic Remediation Aromatics Nitoaromatics Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 745.7208 830.3814 644.7552 498.5343 535.7858 397.4097 601.3763 663.2201 62512303 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2180.8409 3881.9812 2527.4569 1799.0466 6304.4437 3375.7837 3106.8259 3120.2031 3871.9667 4750.1741 1396.8625 2528.8806 283847514 sigma_24 Stress Sigma factors Bacillus cellulosilyticus DSM 2522 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus cellulosilyticus; 719.8368 1080.3648 952.4848 571.584 1320.6644 1114.4528 686.6881 824.5467 784.9232 1358.5673 735.8204 145221152 cumA Organic Remediation Aromatics Other aromatics Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 2968.4437 1933.2113 4362.0783 1391.8055 1689.2567 2631.4093 16684.1168 3707.6718 2949.8718 3299.3509 967.9992 3682.3979 159173941 gyrB other category gyrB Vibrio campbellii AND4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 594.9567 540.9342 516.6706 763.7849 509.9197 659.0507 575.5097 471.7004 490.0061 861.282 742.2746 126728076 pobA Organic Remediation Aromatics Aromatic carboxylic acid Sagittula stellata E-37 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 4109.9942 2568.8354 2834.9088 4330.5296 1936.7544 2970.5655 2677.696 3131.7989 2610.0549 2925.4851 2679.428 3021.8033 159180690 atzC Organic Remediation Herbicides related compound alpha proteobacterium BAL199 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 3082.8063 2305.587 3149.2817 3376.2755 1972.4553 3334.6988 4298.3072 6221.2572 3214.8618 2821.2705 2518.6114 6082.7713 2547079 pstC Stress Phosphate limitation Enterobacter cloacae superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter; 1447.0077 617.9772 707.8135 1317.154 1239.0815 897.6465 956.7661 1024.7235 708.663 997.2756 1784.6196 1248.3666 257437579 pstB Stress Phosphate limitation Faecalibacterium prausnitzii A2-165 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Faecalibacterium;species:Faecalibacterium prausnitzii; 2121.3761 2921.8552 2620.0153 1572.0238 1395.2701 1588.0437 2343.0234 3046.3912 1896.5517 1954.2738 2094.8013 2765.9422 119864846 pimF Organic Remediation Aromatics Aromatic carboxylic acid Psychromonas ingrahamii 37 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Psychromonadaceae;genus:Psychromonas;species:Psychromonas ingrahamii; 1669.836 1793.8077 1918.9213 1206.551 2366.8895 1651.2789 1112.4458 1268.1283 1339.3015 1377.1359 2791.4427 1599.7774 22299223 ppx Phosphorus Phosphorus utilization Thermosynechococcus elongatus BP-1 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Thermosynechococcus;species:Thermosynechococcus elongatus; 2410.9093 1138.0504 1338.3015 2432.6667 1505.7094 1703.1473 2013.5411 1800.3653 1289.9916 1880.2626 1786.3494 1366.4099 21648290 narI Stress Oxygen limitation Chlorobium tepidum TLS superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobaculum;species:Chlorobaculum tepidum; 1389.6652 2089.2948 1424.5061 1424.3645 3795.3578 1803.6685 1891.3602 1639.6327 1748.0627 2905.1417 1691.8665 158320061 ChrA Metal Resistance Chromium Alkaliphilus oremlandii OhILAs superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Alkaliphilus;species:Alkaliphilus oremlandii; 1096.6396 969.6447 775.9287 983.1398 935.0258 836.58 674.8967 943.0923 791.7666 755.8011 1585.9361 843.8775 3426122 nahA Organic Remediation Aromatics Polycyclic aromatics Sphingomonas sp. superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 1521.342 1183.4776 1378.0395 475.0292 472.0731 400.6745 1475.8793 924.9835 133948830 Catechol Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 4155.1334 6453.9513 4490.9708 4765.725 6202.8775 4655.339 8406.9198 2623.4074 6396.7105 4479.5217 4247.8382 2974.0422 111018866 nagG Organic Remediation Aromatics Aromatic carboxylic acid Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 909.3397 836.8418 976.53 1239.6626 1055.7428 896.4949 1095.705 893.0411 790.2988 1059.3387 1339.4677 1029.8575 256777008 Tet Antibiotic resistance other Streptomyces hygroscopicus ATCC 53653 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces himastatinicus; 10341.8942 913.9088 630.4908 1025.8985 526.0021 110819980 alkK Organic Remediation Others Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 742.9178 1349.1818 1402.915 796.6742 1291.8459 774.1973 962.3406 1344.5426 1058.7252 1714.9657 1578.7532 302683558 chitin_synthase Fungi function major biomolecule Schizophyllum commune H4-8 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Schizophyllaceae;genus:Schizophyllum;species:Schizophyllum commune; 2365.6559 2866.7819 1823.7749 2907.1079 1770.5552 2581.9189 2218.147 1818.0859 3518.9223 2708.5117 1416.4185 2897.402 256372657 clpC Stress Protein stress Acidimicrobium ferrooxidans DSM 10331 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Acidimicrobiales;family:Acidimicrobiaceae;genus:Acidimicrobium;species:Acidimicrobium ferrooxidans; 4237.4331 2488.3152 4977.2876 5396.5372 2506.2421 2564.2107 2707.249 3656.9428 3349.1274 2837.7522 4033.3706 3392.8788 9626674 coat_Tombusvirus soil_borne_pathogen structural Cucumber necrosis virus superkingdom:Viruses;family:Tombusviridae;genus:Tombusvirus; 1499.0444 579.1761 1134.9086 1506.8647 1028.5909 875.4065 767.4959 922.8661 875.6971 1051.846 1139.4279 94311241 CopA Metal Resistance Copper Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 1818.7465 3225.4848 2063.1385 2160.0038 1630.7097 2307.6954 4504.8516 1766.0497 2861.4797 1953.2465 2527.8928 984.0052 239837931 pstA Stress Phosphate limitation Micrococcus luteus NCTC 2665 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Micrococcus;species:Micrococcus luteus; 2245.8935 6040.4299 5018.0417 3494.992 3419.7314 5645.7893 5495.9596 4191.6248 5484.7852 10295.479 2271.4302 6479.7323 216773 dehH Organic Remediation Chlorinated solvents Moraxella sp. B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Moraxella; 626.2845 1051.7195 982.5203 687.3134 693.7661 1430.2249 1331.269 1059.5273 1538.0673 1384.3383 77920195 ArsC Metal Resistance Arsenic Pelobacter carbinolicus DSM 2380 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter carbinolicus; 2053.355 2144.8014 2627.9248 2190.6999 2824.4589 2321.1561 1638.2811 2748.3235 1877.6804 2122.8091 2967.4469 2374.0072 120325139 fnr Stress Oxygen stress Marinobacter aquaeolei VT8 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter hydrocarbonoclasticus; 488.522 686.2248 619.0596 862.3176 594.6876 469.1106 550.166 658.9099 602.1477 86159488 cytochrome Energy process Energy process Anaeromyxobacter dehalogenans 2CP-C superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter;species:Anaeromyxobacter dehalogenans; 12202.0466 9508.8006 5780.347 7147.1904 7242.7322 5294.8549 4601.2359 4687.6095 6406.6121 5660.2621 16233.6408 3773.4846 218782130 dsrB Sulphur sulfite reductase Desulfatibacillum alkenivorans AK-01 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfatibacillum;species:Desulfatibacillum alkenivorans; 958.1997 648.6152 1137.5257 770.4283 703.7215 1136.0707 778.51 797.9936 31194.9837 1126.5469 94496327 oxyR Stress Oxygen stress Sphingomonas sp. SKA58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 474.136 1339.6503 1336.5858 600.9241 979.9061 1090.9448 1207.6917 1410.6396 1340.8896 1372.5345 188522324 cat_bac soil_benifit Xanthomonas oryzae pv. oryzae PXO99A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas oryzae; 510.1885 598.767 565.7343 984.7669 888.1627 548.7623 728.5478 735.668 575.4266 126709539 gyrB other category gyrB Sagittula stellata E-37 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 4132.2851 4102.695 4591.1043 1903.6683 1447.4468 3988.9616 3371.9602 5076.774 4859.8198 3832.5265 1444.9358 4627.2659 295658698 hmgB_fungi Fungi function carbon degradation Paracoccidioides brasiliensis Pb01 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Paracoccidioides;species:Paracoccidioides brasiliensis; 629.2091 847.233 572.9114 931.4513 739.6921 459.258 854.3451 183220771 pimF Organic Remediation Aromatics Aromatic carboxylic acid Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' superkingdom:Bacteria;phylum:Spirochaetes;class:Spirochaetes;order:Spirochaetales;family:Leptospiraceae;genus:Leptospira;species:Leptospira biflexa; 777.9449 485.2569 558.0637 685.5504 363.0613 843.4076 765.1802 218220999 ppx Phosphorus Phosphorus utilization Mitsuokella multacida DSM 20544 superkingdom:Bacteria;phylum:Firmicutes;class:Negativicutes;order:Selenomonadales;family:Veillonellaceae;genus:Mitsuokella;species:Mitsuokella multacida; 2634.9063 1996.2615 2874.8779 2818.2247 1167.2248 1912.984 1320.0511 1986.2022 2527.9124 1911.6962 1534.2833 1331.2413 115252358 ChrA Metal Resistance Chromium Clostridium difficile 630 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium difficile; 1220.7208 714.8828 563.1888 542.791 1072.0101 542.3449 754.5345 359.4868 608.5288 458.1482 85710402 AceB Carbon cycling Carbon degradation Others Erythrobacter sp. NAP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 1507.359 1546.6531 2340.0139 1337.0428 1405.8306 2214.084 1411.8359 1953.7627 1743.1701 1691.5831 1923.602 1937.4147 60475994 rubisco Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 1552.9885 4399.0614 2750.3472 2278.848 3337.4471 3739.9245 3512.1952 2374.6525 3252.1733 4056.0565 1772.1268 4203.3346 256783106 cat_bac soil_benifit Streptomyces lividans TK24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces lividans; 3380.1033 3354.7835 2914.5126 3848.3881 1273.8343 4805.0066 5069.4277 1909.1948 4608.4707 3881.3015 3358.9999 2720.0349 217969707 fnr Stress Oxygen stress Thauera sp. MZ1T superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Thauera; 1095.565 868.1885 692.3994 1219.4632 12433.8882 1143.7073 1106.6132 1168.1833 902.2451 1342.3859 809.557 834.5423 134298297 hly virulence hemolysin Desulfotomaculum reducens MI-1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfotomaculum;species:Desulfotomaculum reducens; 870.5472 779.5131 1088.8185 879.6277 911.9916 992.3946 627.7426 474.3206 643.9881 796.6257 1242.2402 712.9286 125714209 mannanase Carbon cycling Carbon degradation Hemicellulose Clostridium thermocellum ATCC 27405 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium thermocellum; 3494.2912 3400.8861 4458.824 3377.1796 3681.5437 3080.5017 3262.4539 4965.9715 3795.0021 4616.7127 2511.0035 4297.5247 46371007 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 8102.496 13288.7394 7523.9512 9607.1563 12006.6189 9951.5849 10682.4983 8758.2158 10672.5574 11520.1692 5213.0266 7426.8386 256780510 MFS_antibiotic Antibiotic resistance transporter Streptomyces hygroscopicus ATCC 53653 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces himastatinicus; 2201.0162 2634.4851 1937.9535 2045.4925 778.4027 2983.57 3776.6872 1876.368 2782.0456 2258.2916 1589.1314 1156.7032 22596902 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 734.075 1778.6059 1524.5959 1188.863 1898.4752 1719.5842 1536.7582 1362.0817 1468.9076 1709.6839 2018.8063 146411339 CusF Metal Resistance Copper Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 9126.8878 8446.339 8653.6546 7649.1636 9986.3476 8800.7285 7542.8561 10382.6697 10041.0337 8529.5818 8715.3573 8991.063 146424875 exoglucanase_fungi Fungi function carbon degradation Pleurotus sp. 'Florida' superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Pleurotaceae;genus:Pleurotus;species:Pleurotus pulmonarius; 488.1594 454.3879 322.9141 539.5182 442.2117 399.6611 316.1221 618.9698 111150741 pimF Organic Remediation Aromatics Aromatic carboxylic acid Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 1072.7973 619.1806 1070.1191 903.3897 876.8989 1215.7652 762.8918 862.6936 42555706 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 982.1293 595.1128 776.1275 632.2322 464.4651 1705.8888 722.1642 657.715 1437.2479 629.3514 254431172 ureC Nitrogen Ammonification Cyanobium sp. PCC 7001 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanobium; 1366.8113 1388.0465 1154.6174 792.8795 950.6264 640.8876 1880.5018 700.3886 63081906 nosZ Nitrogen Denitrification unidentified bacterium superkingdom:Bacteria; 2606.591 3644.2689 4582.4969 2434.9131 3786.4278 2541.2528 2182.0388 5203.6147 2862.6446 2900.8538 5737.772 4125.4584 91698538 pcaG Organic Remediation Aromatics Other aromatics Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 5247.0986 2418.2821 2832.4808 3828.9102 3075.2367 2522.1536 2771.6658 2607.3087 2355.6363 2653.9747 4063.3292 2859.5007 110821649 pcbC soil_benifit Rhodococcus jostii RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 6319.4459 5764.4199 5349.2221 7747.4228 6175.3009 6570.9703 9045.4107 4042.5063 6464.4025 6093.8553 5683.116 5537.6383 60475948 rubisco Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 4159.4049 6939.6721 4720.0841 5849.0623 5355.9551 6335.1246 5545.4651 5247.7831 6771.7364 7121.593 3974.6064 6392.422 73541483 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 750.4759 666.168 621.3033 495.0278 672.5992 605.1233 916.245 626.0604 803.0687 763.9992 119879226 BADH Organic Remediation Aromatics Other aromatics Stenotrophomonas maltophilia R551-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 2106.7618 1912.2625 1499.0791 1699.3971 1751.7853 1675.8221 1318.9156 1244.6581 1527.956 1512.0824 2840.5009 1930.6446 325921572 sir Sulphur sulfite reductase Xanthomonas gardneri ATCC 19865 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas gardneri; 3335.2528 1360.2295 2043.9609 3050.8908 1744.8461 2079.0437 1787.1303 3475.4877 4801.3654 2006.7003 1742.985 2777.6833 260935546 pstA Stress Phosphate limitation Vibrio orientalis CIP 102891 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio orientalis; 893.9865 857.2809 987.1875 1114.0197 1177.0648 969.6311 980.303 958.4889 897.5272 942.4483 1127.2344 887.4393 157681309 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bacillus pumilus SAFR-032 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus pumilus; 870.3457 1536.8159 2014.1986 942.2801 1134.7092 1261.3834 1257.1484 2105.6471 1490.1552 1893.5507 1372.2133 1869.261 239910448 pstB Stress Phosphate limitation Thermococcus gammatolerans EJ3 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Thermococcus;species:Thermococcus gammatolerans; 1711.7179 3263.9546 4426.3719 1793.0471 1603.825 1443.6258 2685.2032 4242.5475 2440.7084 2376.254 3056.8665 4422.2419 50119447 phn Organic Remediation Herbicides related compound Erwinia carotovora subsp. atroseptica SCRI1043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium atrosepticum; 3548.4234 2188.2918 2900.3511 3534.2217 1569.9466 1809.4169 2204.9385 2169.5794 2654.6001 1479.5953 2256.7604 46917304 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3690.3894 3085.4441 3323.7264 3385.0419 4513.4691 3699.7818 2793.8033 3184.162 2854.8864 3075.0169 5748.7032 3884.5656 260881154 ahpC Stress Oxygen stress Mitsuokella multacida DSM 20544 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Veillonellaceae;genus:Mitsuokella;species:Mitsuokella multacida; 502.8409 1035.4473 444.6621 1085.9832 804.409 1515.3088 468.0264 897.7952 676.2514 139478503 mer Metal Resistance Mercury uncultured soil bacterium superkingdom:Bacteria; 474.7136 16776.7202 1132.1607 649.0024 726.9653 974.8661 1892.9993 771.4625 1458.919 1009.1216 311278267 CysJ Sulphur sulfite reductase Enterobacter cloacae SCF1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter;species:Enterobacter cloacae; 2642.0254 3613.4319 3395.7696 2771.9818 3753.5078 3746.9539 3139.126 2781.2592 3357.8059 2617.1924 3173.3138 2867.2594 148628414 bphA Organic Remediation Aromatics Polycyclic aromatics uncultured bacterium superkingdom:Bacteria; 690.2494 571.2233 1254.4814 463.4551 746.2473 569.1298 687.5832 444.9415 801.5277 627.2662 164374967 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1653.0322 1139.8598 1545.0384 1962.0609 860.3458 1322.2705 986.9672 923.4834 1031.49 1482.8152 1279.9348 1257.1141 83635256 ureC Nitrogen Ammonification Hahella chejuensis KCTC 2396 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Hahellaceae;genus:Hahella;species:Hahella chejuensis; 3751.7481 1233.8361 1649.65 3064.287 1735.4421 1575.0915 1974.6341 1702.9259 1689.3637 1602.9215 4416.1786 1467.8645 91978108 CopA Metal Resistance Copper Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 961.645 616.5231 1071.909 1063.2361 2524.5178 1088.5037 1328.3441 606.1336 764.7119 890.798 781.3522 994.4829 222450337 phn Organic Remediation Herbicides related compound Chloroflexus sp. Y-400-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus; 975.1311 1495.0713 1311.6942 1108.2941 1215.2873 2039.7535 1850.5492 1534.7491 1646.4956 1731.3245 864.1649 1949.8424 119183920 phospholipase_C_fungi Fungi function carbon degradation Coccidioides immitis RS superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Coccidioides;species:Coccidioides immitis; 894.8193 1175.1312 775.2624 934.6232 1651.5841 1341.0406 890.1814 1244.0287 1290.8419 1304.4535 1143.781 63256651 vanA Carbon cycling Carbon degradation Others Pseudomonas syringae pv. syringae B728a superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae; 3679.4689 1778.007 2007.5976 3618.8313 2274.0636 1843.2877 1890.7294 1924.8577 1427.7091 2252.1277 2160.4845 2714.6656 16503575 pstB Stress Phosphate limitation Salmonella enterica subsp. enterica serovar Typhi superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 6643.6277 6777.5867 6617.7196 4402.3708 8776.4828 6336.0818 5448.8399 6169.7777 5742.7392 5406.9177 5792.0916 5303.0073 254475115 grpE Stress Heat shock Ruegeria sp. R11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 428.9335 1476.8622 555.4538 546.0929 1075.4228 1006.3937 812.7574 1242.9393 970.0419 1206.0882 821.7849 158138798 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 3779.1231 1377.2154 2666.5126 3151.9785 1977.5744 1331.4686 1937.8491 1424.0919 2443.2479 2437.5913 2064.242 2292.0114 148500643 ChrA Metal Resistance Chromium Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 7269.3444 6217.0163 5964.5332 6526.7884 9300.4485 7451.0132 6174.9053 6808.738 9290.9004 7546.0298 7846.0511 6421.5483 125497164 atzA Organic Remediation Herbicides related compound Streptococcus sanguinis SK36 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus;species:Streptococcus sanguinis; 1165.1846 531.5188 586.392 1059.1611 1130.2467 1373.6515 1258.9049 698.0742 993.9927 520.8113 119670771 ArsC Metal Resistance Arsenic Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 1538.6025 482.3324 729.5501 1191.3148 692.2219 603.8845 1156.999 563.0147 887.8556 1967.8553 800.6619 221156620 sigma_70 Stress Sigma factors Thermomicrobium roseum DSM 5159 superkingdom:Bacteria;phylum:Chloroflexi;class:Thermomicrobia;order:Thermomicrobiales;family:Thermomicrobiaceae;genus:Thermomicrobium;species:Thermomicrobium roseum; 3242.2611 1092.1262 2017.9934 2802.6369 1486.0294 20205.5776 2755.6304 3373.5939 1934.469 1700.9964 1572.0499 2210.4549 116254793 atzD Organic Remediation Herbicides related compound Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1998.5378 3114.0766 2875.5613 2635.9654 2761.2099 2844.7159 4869.1346 2627.3534 3237.2511 2386.9068 2181.0736 3259.4279 171089977 ArsC Metal Resistance Arsenic Geobacillus sp. WCH70 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 1224.9046 939.5213 1373.458 626.6892 933.1315 694.929 706.1416 2236.8333 1293.8241 874.5563 2136.1957 968.2542 15986719 glucanase_inhibitor_Oomycetes soil_borne_pathogen oomycete virulence Phytophthora sojae superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 822.1641 1605.6979 1545.2856 1074.3517 1676.478 1624.4623 1404.8161 927.8409 1132.8008 1303.9063 1089.4197 1452.2783 112463111 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 3292.4173 1843.8095 2730.937 3517.7299 1141.4968 1208.8868 1561.3733 1878.5952 2340.3296 2165.7441 2115.1741 3032.4871 85699296 oxyR Stress Oxygen stress Nitrobacter sp. Nb-311A superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter; 635.3916 525.3131 850.4727 726.6213 547.7163 1062.5344 705.9541 151563041 ahpC Stress Oxygen stress Ochrobactrum anthropi ATCC 49188 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum;species:Ochrobactrum anthropi; 538.6217 1031.0256 515.512 743.2551 680.6651 788.4656 771.7513 443.0769 852.1663 1067.9704 903.204 182636084 sigma_70 Stress Sigma factors Beijerinckia indica subsp. indica ATCC 9039 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Beijerinckia;species:Beijerinckia indica; 2998.0619 7024.8943 5549.1982 3458.6798 8353.4197 4573.1094 5349.3242 5880.5945 5113.6967 7625.6429 2323.8038 6602.7878 114193779 endoglucanase Carbon cycling Carbon degradation Cellulose Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 3261.523 842.9073 1998.7285 2929.8184 1579.9929 1316.9759 1190.0935 1832.8411 1485.717 1531.8359 2490.967 1338.492 82947026 nosZ Nitrogen Denitrification Magnetospirillum magneticum AMB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magneticum; 2202.655 1795.2731 2119.1009 2863.084 900.4073 1748.8088 1257.4122 1730.7536 1956.998 1504.0426 1600.5191 1369.7056 283783990 pap virulence adhesin Citrobacter rodentium ICC168 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter;species:Citrobacter rodentium; 1054.85175 750.3772 819.94705 848.58905 1423.3303 1040.6436 911.8257 889.7972 916.0957 740.62595 1828.969 904.4399 197783213 exochitinase Carbon cycling Carbon degradation Chitin Streptomyces sviceus ATCC 29083 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces sviceus; 2567.6239 1762.8433 2383.2979 3218.6855 1271.2937 2001.6299 2579.8607 2854.1269 2352.1649 2648.7935 918.7648953 1855.5012 162149105 sigma_70 Stress Sigma factors Gluconacetobacter diazotrophicus PAl 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter;species:Gluconacetobacter diazotrophicus; 2993.4143 1201.4191 1892.6048 2870.3026 1837.5961 1392.0116 1478.3747 1915.2106 1317.518 1817.6412 14395.98957 1728.7379 144942856 pcc Carbon cycling Carbon fixation Geobacter bemidjiensis Bem superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter bemidjiensis; 838.5294236 559.8187 486.7338698 491.8261608 707.367 29366713 lysin Bacteria phage LYSIS Pseudomonas phage gh-1 superkingdom:Viruses;order:Caudovirales;family:Podoviridae;genus:T7-like viruses; 1412.6613 980.7435 1116.836 1359.4246 789.2732 600.0305 955.0876 1174.5855 729.493 974.6782 491.7005 149810707 gyrB other category gyrB Roseobacter sp. AzwK-3b superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 3188.4244 3947.4015 2864.6421 2966.1168 6730.8627 3074.9081 4778.7262 2490.9261 3301.926 2936.0616 3871.1805 2478.5653 55978420 xylF Organic Remediation Aromatics BTEX and related aromatics Thermus thermophilus HB8 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Thermus;species:Thermus thermophilus; 1156.0372 2598.0286 1406.0846 501.1916829 1734.6838 1078.5278 1191.3552 1160.8966 1160.467 1092.3914 1716.3657 1052.2961 254481517 limEH Carbon cycling Carbon degradation Others marine gamma proteobacterium HTCC2148 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 803.6812 466.4423971 492.308587 1036.4095 797.002 415.5125482 491.809 467.9053441 723.0378 790.8861 260647178 txtA soil_borne_pathogen toxin Streptomyces scabiei 87.22 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces scabiei; 1741.3362 1028.715 1526.1371 1005.5353 2091.8814 833.3943 2179.4121 1323.8806 1044.7698 1050.0706 1501.1654 238616632 phenol_oxidase Carbon cycling Carbon degradation Lignin Moniliophthora perniciosa FA553 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Marasmiaceae;genus:Moniliophthora;species:Moniliophthora perniciosa; 1856.55165 1368.7097 2541.6329 992.87195 1831.6997 1719.59175 1467.6443 1955.3726 1690.92465 1583.8492 2034.7398 2816.8343 148243371 hrcA Stress Heat shock Synechococcus sp. RCC307 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 3811.5218 1382.7329 2988.8384 3182.4829 2086.3831 2057.1028 1912.0869 2038.1537 1827.4269 2595.5184 2764.2709 2532.4648 221084261 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Variovorax paradoxus S110 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Variovorax;species:Variovorax paradoxus; 4030.3742 23757.40663 5418.5319 3110.2833 4713.8145 3929.9591 3333.2596 6626.7624 3967.8374 3057.7089 6325.2697 5931.2897 157322102 proO Organic Remediation Aromatics Other aromatics Serratia proteamaculans 568 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Serratia;species:Serratia proteamaculans; 600.0744 662.7785 644.6953 4533.85571 1091.8986 733.4264 429.9271 517.2761 507.2063 543.1473 711.2002691 125973625 ArsC Metal Resistance Arsenic Clostridium thermocellum ATCC 27405 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium thermocellum; 682.9786 636.9111 1021.7623 820.5468 744.8995 949.6286 862.0329 941.7895 747.9598 169239696 akbF Organic Remediation Aromatics BTEX and related aromatics Mycobacterium abscessus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 2131.2153 823.1691 1069.3792 1782.64385 1351.284 1121.4972 1101.3139 1353.8992 972.70365 1380.698 2066.8607 1274.2109 88701121 atzA Organic Remediation Herbicides related compound Congregibacter litoralis KT71 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;genus:Congregibacter;species:Congregibacter litoralis; 2706.2318 2086.4915 2258.7963 2597.0918 2386.5126 2507.9451 1865.9308 2059.6872 1340.9906 2997.3989 2981.9818 2535.1838 262401925 oxyR Stress Oxygen stress Vibrio sp. RC586 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 1431.4396 488.8809 811.9285 1202.1496 904.7208 1487.4706 922.1277 731.2736 579.5834 21056.79416 544.4052 239735891 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria; 4052.8465 6406.5363 4613.9894 4810.3242 1658.8266 5462.2308 6134.7595 4468.6916 5604.5829 4636.8347 3415.0734 2466.934 56680868 bclA Organic Remediation Aromatics Aromatic carboxylic acid Silicibacter pomeroyi DSS-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria pomeroyi; 2699.7977 2101.362 2863.9588 2962.3089 1981.5938 2955.7065 1912.0296 2394.9877 2064.6225 2223.9883 1956.6598 2673.2763 126234866 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium sp. JLS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 2480.6095 2837.5249 2489.916 2786.0081 2531.8943 3200.7204 2350.6396 2214.864 2866.4072 3250.319 1752.8591 3049.2268 225039490 Tet Antibiotic resistance other Blautia hydrogenotrophica DSM 10507 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;genus:Blautia;species:Blautia hydrogenotrophica; 1332.6854 3414.274246 1600.652 1602.1036 1717.2031 1951.0178 1469.2215 1448.6635 1377.7896 1593.095 2412.5747 1637.8984 147886176 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured bacterium superkingdom:Bacteria; 1407.651 2538.4062 2183.191 2104.4329 2278.0072 3052.2643 2725.739 2010.1929 2399.7391 3173.4045 1504.2285 2216.2637 119698615 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 4449.1127 4898.646 6860.6162 2488.1828 2532.3683 5556.2609 6060.4668 7562.4227 5619.843 6300.7697 2557.347 6438.7961 38505868 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Synechocystis sp. PCC 6803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechocystis; 885.9943 1220.39915 953.36135 952.64915 1543.4484 1007.11155 1227.78465 669.9836 1070.4266 950.41 1440.67135 1015.6376 90422793 phn Organic Remediation Herbicides related compound Rhodopseudomonas palustris BisB18 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 2631.884 16593.6995 17811.9021 14602.0135 14855.2891 13310.3933 11504.6957 23750.011 13515.1192 15271.1583 21995.1011 11077.762 133915560 pnbA Organic Remediation Aromatics Nitoaromatics Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 6474.8106 8535.2948 6381.293 5232.5915 7632.1042 5779.3489 4739.1195 5334.3287 5703.7036 5435.7383 5385.9798 4798.2336 67903304 tre_fun soil_benifit Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 1505.868 1575.1327 1832.106 1419.858 2386.7211 1694.9662 2171.7614 1098.1359 1818.9814 1213.6367 1416.6588 2214.9042 188582648 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 9794.3208 11177.9861 11480.2615 10291.6901 11924.9222 11491.4544 11479.0138 8921.4783 9920.5021 9168.6489 15140.6655 11724.2947 219947767 pheA Organic Remediation Aromatics Other aromatics Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 852.2793 735.2727551 769.4732 721.0503246 1607.2188 986.6065 1003.7023 1056.4972 1562.5417 1175.3135 119775798 sped_bac soil_benifit Shewanella amazonensis SB2B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella amazonensis; 8046.9804 8597.4275 9096.3674 9078.8291 8178.6128 8018.6343 10649.0855 5633.0703 7898.8292 7434.1196 8721.6518 7650.4974 85823169 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Roseobacter sp. MED193 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 3540.955 2410.059 1210.6593 3321.5402 3923.6569 1750.4989 4456.3784 1930.8251 2029.6175 2521.9203 2724.1258 2533.0141 238697007 Tet Antibiotic resistance other Yersinia kristensenii ATCC 33638 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia kristensenii; 9374.1585 3943.0563 5536.3453 6946.056 6088.2482 3348.7428 4635.3255 3703.9679 3685.2808 4170.2893 8910.7014 1945.276775 60476036 rubisco Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 1330.1467 917.1964 1376.6421 1457.0468 778.2205 697.0113 1150.1843 832.5611 817.5404 859.9605997 663.2587 197714697 nagG Organic Remediation Aromatics Aromatic carboxylic acid Streptomyces sviceus ATCC 29083 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces sviceus; 13408.3341 9429.7075 13242.2291 15972.6564 6653.2423 17041.5384 20480.3974 8286.7786 13127.629 20858.1461 10524.6022 9009.0661 114569132 sigma_24 Stress Sigma factors Maricaulis maris MCS10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Maricaulis;species:Maricaulis maris; 8542.2023 26289.639 6084.7893 7518.0646 6718.3114 5501.1769 4857.997 5279.8716 5396.2649 5906.259 10012.8301 6658.3626 13898429 dsrA Sulphur sulfite reductase uncultured phenanthrene mineralizing bacterium superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria; 2530.1881 782.8644 1478.3604 2393.574 1141.4778 718.6795 1152.3449 1340.4998 888.6857 1138.9667 2909.6438 1073.4989 89092388 ahpF Stress Oxygen stress Oceanospirillum sp. MED92 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Oceanospirillaceae;genus:Neptuniibacter; 814.6151 998.6723 786.1961674 1068.3522 765.7377 821.519 902.8216 2284.3304 1072.2846 1240.6595 1410.8203 118470071 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 1261.3599 1112.3359 1421.1182 1493.8218 698.9821 1483.6166 876.9424 608.0512 919.9479 1197.4823 892.122 159031049 nitro Organic Remediation Others Microcystis aeruginosa PCC 7806 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Microcystis;species:Microcystis aeruginosa; 590.6047 991.855 743.5929 966.1686 702.2978917 1069.24 865.486 777.5664 1041.8809 1206.5014 1122.798 86569205 pimF Organic Remediation Aromatics Aromatic carboxylic acid Frankia sp. CcI3 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 1480.3063 1330.8452 1448.8161 1538.2594 1093.2827 1300.7932 918.467 1111.2812 959.1152 1303.683 1812.8005 965.2742 118698615 rubisco Carbon cycling Carbon fixation Burkholderia ambifaria MC40-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ambifaria; 709.8432 1214.9262 1115.6147 977.2225 2655.7001 1415.7622 1310.7373 1466.7352 1134.8394 1542.8683 1175.8873 227181737 sigma_24 Stress Sigma factors Corynebacterium glucuronolyticum ATCC 51866 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium glucuronolyticum; 976.2594 469.8064401 876.8328 1028.3828 574.6278 851.8382 491.9928 654.2423 671.3059 18892757 CopA Metal Resistance Copper Pyrococcus furiosus DSM 3638 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Pyrococcus;species:Pyrococcus furiosus; 654.2335 642.7034 788.8268 928.8656 519.6026703 1182.4301 403.3432342 902.1958485 1116.4811 270276196 obgE Stress Radiation stress Bifidobacterium gallicum DSM 20093 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium gallicum; 520.5851142 747.6567 644.6974323 741.3785 853.6326407 899.6207 940.7078 683.8551 605.7913 442.0126404 1039.592543 602.504772 227079989 pstB Stress Phosphate limitation Corynebacterium lipophiloflavum DSM 44291 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium lipophiloflavum; 1511.2409 1218.0609 1454.6465 477.0163 1177.0299 891.95935 1367.3834 881.0848 884.0255 1104.2319 167350237 pobA Organic Remediation Aromatics Aromatic carboxylic acid Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 14159.589 8096.7725 13270.6828 16018.1048 7907.3208 9495.6425 8271.5367 5830.1197 9249.2089 9716.1176 17065.3966 9165.6698 226946860 pstB Stress Phosphate limitation Azotobacter vinelandii DJ superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Azotobacter;species:Azotobacter vinelandii; 3198.86805 1830.16225 2309.2629 3243.38215 2074.98845 2448.16485 2096.20705 2271.1731 1985.7068 2393.46705 2114.6096 3104.77415 254384162 SMR_antibiotics Antibiotic resistance transporter Streptomyces sp. Mg1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 650.7142 740.9668 735.9015 521.6557543 750.1151 742.9985 499.6202 729.5971 596.344 491.9603 651.4991351 797.4924 160897573 fnr Stress Oxygen stress Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 4475.4534 1479.5636 3030.5086 3835.7179 1863.8361 2183.5732 2432.6976 2865.4081 2355.8459 3055.8329 2113.084 2500.0015 62825697 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1043.2597 434.7515833 557.0967461 905.6393 785.8024 913.0737 374.6519891 620.6015 721.146454 756.0482 302418412 mannanase_fungi Fungi function carbon degradation Verticillium albo-atrum VaMs.102 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Plectosphaerellaceae;genus:Verticilium;species:Verticillium albo-atrum; 1854.9868 1420.6165 1679.4851 2231.1624 649.7231913 971.7399 1096.4964 977.9163 1074.8357 1423.8563 954.4975 14455.97657 21106322 AceA Carbon cycling Carbon degradation Others Xanthomonas axonopodis pv. citri str. 306 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas axonopodis; 816.8449 598.5815 818.0351 754.0213 1011.5102 736.7442 652.6417721 742.9808 677.9375 590.5006727 625.4535 89241792 amyA Carbon cycling Carbon degradation Starch Actinoplanes sp. SE50/110 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Actinoplanes; 807.1199 1121.485 1362.4807 974.6115 751.6784 1113.3752 1045.8997 915.057 269835191 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Vibrio harveyi 1DA3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio harveyi; 1398.4768 699.5217 851.56825 517.3042984 973.1915 694.4221 663.9544 696.8981 732.1102429 282863332 sigma_24 Stress Sigma factors Streptomyces sp. ACTE superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 4097.0387 4669.4329 1536.2857 4722.9751 3178.4713 2477.9877 2461.1323 2348.2894 3137.3148 2468.7792 5469.3451 2677.5745 170720005 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 2110.2542 1584.027 1276.4505 2370.4252 2457.3075 1937.8862 3544.3233 1278.0901 1567.3061 1706.9928 2126.73 1597.2781 92441842 CopA Metal Resistance Copper Mycobacterium sp. KMS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 2261.1795 631.4971265 1213.3492 1913.6401 1324.8734 1177.3291 1988.8113 1126.6294 972.3018 1095.183 1093.9843 671.527856 21693597 phoB Stress Phosphate limitation Pseudomonas syringae superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 4693.8894 1728.4767 3149.6888 3758.2858 2453.0606 1855.2378 2342.3811 1533.805 2014.8816 2698.1157 5719.4893 2025.5763 56478646 xylC Organic Remediation Aromatics BTEX and related aromatics Azoarcus sp. EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 1047.6789 1143.8036 1333.0091 1008.3022 1337.2729 912.1242 897.14955 1300.46485 1120.3073 1054.80515 779.9586777 1108.9695 157917566 exochitinase Carbon cycling Carbon degradation Chitin Salinispora arenicola CNS-205 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora arenicola; 2851.8916 2950.9082 4381.2995 3284.7487 3721.1312 2103.339715 1974.5653 1616.9129 3094.703 3347.5229 1612.2671 2064.6311 133738758 CopA Metal Resistance Copper Herminiimonas arsenicoxydans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Herminiimonas; 3020.1043 1914.4033 1127.7552 2306.8139 1368.7268 1051.8608 1577.3742 1150.6806 1906.7911 1453.6037 1882.4478 1362.8395 119879899 cellobiase Carbon cycling Carbon degradation Cellulose Salinispora arenicola CNS205 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora arenicola; 2121.1881 3367.6152 2971.4201 2148.3883 2008.2509 3943.1356 3639.3426 2671.655 3800.8382 3902.0711 2082.4767 2822.2173 94425130 pstC Stress Phosphate limitation Sphingomonas sp. SKA58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 1236.8594 475.2347822 1080.3923 834.2006 458.3021746 1025.8207 715.1848938 632.127672 749.1459 1095.9101 110823964 TerD Metal Resistance Tellurium Rhodococcus jostii RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 3764.624498 3113.25475 3152.599668 4119.360053 1807.40305 2346.99305 3440.9536 3914.5823 3174.21865 2976.9978 2508.2407 3869.014433 148252823 trzN Organic Remediation Herbicides related compound Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 841.0409 1323.5692 2496.2988 1328.1805 2412.6009 941.0795 1420.6106 1170.1321 852.0032 676.7427 1387.1085 1059.4644 142054 nifH Nitrogen Nitrogen fixation uncultured marine bacterium superkingdom:Bacteria; 905.5652 828.6229 824.0835 1411.393 1549.7714 1354.591 620.4246 798.8457 4118.2951 1264.6562 1116.5194 1276.6964 295418813 dspE soil_borne_pathogen secretion system type III Pectobacterium carotovorum superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium; 1094.074 535.6983575 784.1315537 1074.9133 615.6719248 839.1076 765.6377 619.7784906 525.0758 726.6344 964.0832212 1064.5591 118757826 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Shewanella pealeana ATCC 700345 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella pealeana; 1173.3918 865.2195 1234.1261 1053.4903 1455.8838 850.938 1188.3041 980.8939 949.5397 1160.2053 1221.4787 241319382 MFS_antibiotic Antibiotic resistance transporter Neisseria flavescens SK114 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Neisseria;species:Neisseria flavescens; 1388.2145 1057.6133 492.3538 454.5905707 417.6959 639.0894 1334.831 579.4619684 161389594 pstB Stress Phosphate limitation Phaeobacter gallaeciensis BS107 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 10497.9582 8756.289 7594.9911 8561.8571 10076.2917 8376.3787 7775.61 6500.4301 7392.1005 8121.9506 8347.8049 7742.9847 91682196 fnr Stress Oxygen stress Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 928.9777 1405.695 904.6904 961.1279 1885.45 1122.5591 1161.2803 1403.4057 1277.4224 1520.7476 1214.434 194465247 amoA Nitrogen Nitrification Archaea superkingdom:Archaea;phylum:Crenarchaeota; 631.2911 1154.501 787.0805 828.9879 629.191469 1537.5037 800.4434 1142.9004 495.7567501 631.4385931 397.1931174 255268780 ahpC Stress Oxygen stress Bryantella formatexigens DSM 14469 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;species:Bryantella formatexigens; 6033.3178 8760.0353 8720.0856 8661.0683 6341.7182 10585.7913 8689.8215 8193.1521 10098.4396 10146.9639 6269.6047 10002.78 120401878 atzA Organic Remediation Herbicides related compound Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 2978.1687 1089.9599 1805.0917 2807.746 1486.8068 1469.7993 1748.0742 3214.8222 2014.0778 2021.3172 3399.0249 1549.6406 145239601 ABC_multidrug_fungi Fungi function metal resistance Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 787.5401292 1526.6728 1563.0238 559.9822 718.7939 1295.4987 1112.1074 1058.8454 1680.2426 1353.9767 1314.1308 82568121 gyrB other category gyrB Thermoactinomyces sp. MBIC08001 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Thermoactinomycetaceae;genus:Mechercharimyces; 958.9451 831.7321 960.6965 1023.9174 1275.4459 831.1148335 821.2224 941.4703 710.6179743 683.4423923 31964.44359 737.9602038 39918803 gyrB other category gyrB Pseudomonas stutzeri superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 519.3493358 1128.2258 1026.5895 1416.5617 1209.1112 820.8668 1125.6126 1371.7671 1366.7064 1250.6324 89210693 amyA Carbon cycling Carbon degradation Starch Halothermothrix orenii H 168 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Halanaerobiales;family:Halanaerobiaceae;genus:Halothermothrix;species:Halothermothrix orenii; 1353.2099 1554.3496 1604.4322 1256.5972 1844.4026 1205.8208 1114.3097 1275.3304 1101.6399 1192.3647 2558.0437 1602.1394 84787750 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Erythrobacter litoralis HTCC2594 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter;species:Erythrobacter litoralis; 1663.2139 1926.9037 1996.1405 1516.001 1469.0607 1475.4677 1351.0552 2253.7066 1609.3239 1503.4619 1989.3573 2199.2219 157846118 AceB Carbon cycling Carbon degradation Others Shewanella pealeana ATCC 700345 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella pealeana; 9624.8992 9160.1388 9612.6064 9740.7894 10219.8154 7290.3079 7903.8012 8137.5088 7974.5939 9618.9695 16146.3834 7586.999 83758157 pstB Stress Phosphate limitation Salinibacter ruber DSM 13855 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Rhodothermaceae;genus:Salinibacter;species:Salinibacter ruber; 2989.308533 1989.405933 2470.772333 2155.501867 2029.510833 2071.7849 1683.0915 3976.76595 2183.437833 2013.984533 3821.4896 2209.283133 197696888 TerC Metal Resistance Tellurium Streptomyces sp. SPB74 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 3190.681 5100.0803 3424.9939 3908.7942 2901.9276 5582.4345 4082.5637 3535.5733 4021.0031 4427.3521 2935.4462 4446.1225 158452061 acc soil_benifit Rhizobium sp. TAL1145 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium; 1642.9714 1471.2427 1591.7829 2314.2653 1124.8503 1414.9247 1376.5879 1149.7848 1622.8599 1965.8534 1463.723 939.9106 21673844 sox Sulphur Sulphur oxidation Chlorobium tepidum TLS superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobaculum;species:Chlorobaculum tepidum; 1289.9707 804.2719 937.1425 1232.1609 947.8398 770.547 554.5451 635.2165 729.1803 544.1012895 145216441 alkB Organic Remediation Other Hydrocarbons Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 2127.0849 3121.7986 3377.2753 2117.61 2143.4703 2307.7253 2914.5046 4184.6286 2500.4092 3677.8823 2566.14 3635.0213 92012039 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bacillus amyloliquefaciens FZB42 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus amyloliquefaciens; 939.4952 644.5184 708.0875 607.8414 781.0024 1223.1277 1077.486 828.1229 819.2824 91697326 metC Metal Resistance Mercury Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 6047.462 3318.5819 5887.4884 3679.0182 1435.5592 5390.8743 4127.6188 5306.1621 4856.3134 4810.0598 3416.2986 4509.3462 91783709 cbdA Organic Remediation Aromatics Chlorinated aromatics Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 3481.8462 3196.8204 4159.66685 2764.58515 2957.74445 2974.62615 2559.82215 3635.06435 2958.13675 2859.51555 3464.27575 3807.06705 70985510 ABC_multidrug_fungi Fungi function metal resistance Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 1846.8871 1502.9334 2606.0429 2273.2412 1485.0625 1265.1973 1320.6247 1386.9197 1197.2156 1284.8117 1725.8074 1584.713 256688381 cap virulence capsule Kytococcus sedentarius DSM 20547 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Dermacoccaceae;genus:Kytococcus;species:Kytococcus sedentarius; 6892.9848 4047.4051 6330.7973 6707.8971 5833.0907 5001.0835 3942.799 4521.2242 5338.5794 4813.6889 8058.3565 6796.0981 156061277 lactase_fungi Fungi function carbon degradation Sclerotinia sclerotiorum 1980 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Sclerotinia;species:Sclerotinia sclerotiorum; 1242.0039 638.8670796 996.0429 1042.5849 675.5964 803.179 629.8771 891.529 163782530 fnr Stress Oxygen stress Hydrogenivirga sp. 128-5-R1-1 superkingdom:Bacteria;phylum:Aquificae;class:Aquificae;order:Aquificales;family:Aquificaceae;genus:Hydrogenivirga; 1474.3961 1063.6721 1261.6929 1111.1569 1458.4623 1504.3184 1099.8342 1377.3331 1267.777 1130.3797 2375.0002 1571.8183 111152950 TerD Metal Resistance Tellurium Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 20978.6962 15554.2935 19510.4969 22021.456 14444.4928 17200.1349 15849.9391 21510.5027 16436.09 20334.2051 14780.897 17091.0338 115423778 grpE Stress Heat shock Bordetella avium 197N superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella avium; 2128.9251 1209.2175 1590.6052 2228.2723 2143.0153 1612.7963 1366.1385 1635.3235 1234.2281 1483.9095 2388.8144 1918.7387 197758194 nagG Organic Remediation Aromatics Aromatic carboxylic acid Streptomyces sp. Mg1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 5883.3328 6014.3969 6677.5059 7328.5867 6417.2719 6898.2139 5022.9274 5737.3041 6635.77 6408.5259 7848.5016 6730.1828 238588935 ATP_sulphurylase Fungi function Sulfur Moniliophthora perniciosa FA553 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Marasmiaceae;genus:Moniliophthora;species:Moniliophthora perniciosa; 955.5602 1011.1218 818.5003 1436.1033 1566.8539 1280.3181 1326.9562 1414.8119 2207.6831 947.2387 1106.909475 3288.6915 124266965 pimF Organic Remediation Aromatics Aromatic carboxylic acid Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 3801.6759 5414.2353 5090.8264 4548.811 2720.4848 6081.3613 5787.3148 5498.6442 7793.0685 7266.3326 4598.8136 4958.2155 118746907 rd Organic Remediation Chlorinated solvents Geobacter lovleyi SZ superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter lovleyi; 755.4996 964.9852 1010.4797 850.2328 1103.881 1091.4202 803.8909 761.3103 825.5951 943.7325 1354.8675 920.5343 88806433 amyA Carbon cycling Carbon degradation Starch Robiginitalea biformata HTCC2501 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Robiginitalea;species:Robiginitalea biformata; 1158.4148 886.13 1012.6316 1804.101 828.4288 815.7282 571.6606 905.8446 1173.3817 1035.3403 718.5177 49610658 CopA Metal Resistance Copper Erwinia carotovora subsp. atroseptica SCRI1043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium atrosepticum; 1127.3727 1559.8799 1331.5261 843.384 979.7782 1544.3115 1852.7285 1607.4837 1830.9915 1710.8006 939.1698 2127.0447 84779128 SMR_antibiotics Antibiotic resistance transporter Sodalis glossinidius str. 'morsitans' superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Sodalis;species:Sodalis glossinidius; 1016.3413 2592.6767 1410.8535 1225.586 1786.102 2051.6837 1780.0761 970.6537 1883.5748 1979.1527 894.7723 2147.808 240864774 sigma_38 Stress Sigma factors Ralstonia pickettii 12D superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 4542.9507 3008.186 3274.4715 2869.7319 4246.05435 2807.9932 2403.448567 4909.73505 3987.01155 2570.911267 5638.6705 4454.9112 153004428 sigma_24 Stress Sigma factors Anaeromyxobacter sp. Fw109-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter; 1076.1285 971.4133085 773.5771145 794.355 676.642026 115361309 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Burkholderia cepacia AMMD superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ambifaria; 746.0567 1725.9664 1608.9831 886.9832 804.4137722 883.7521 1715.7969 1645.8058 1594.4598 1237.1644 1532.8459 119479243 pectinase Carbon cycling Carbon degradation Pectin Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 1446.2823 3740.5006 2337.5276 2011.2487 2163.4726 2299.1853 2593.5102 3719.2193 2479.1965 2941.321 1341.7981 2724.4568 227238296 ahpC Stress Oxygen stress Mobiluncus curtisii ATCC 43063 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Mobiluncus;species:Mobiluncus curtisii; 1549.4692 2349.0518 1773.6137 1762.8988 2636.7785 2425.7454 1853.9788 1529.2417 1923.3442 1723.3517 2490.8709 1841.8512 152965603 glnA Stress Nitrogen limitation Kineococcus radiotolerans SRS30216 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Kineosporiaceae;genus:Kineococcus;species:Kineococcus radiotolerans; 2784.9854 3877.9546 2947.1683 3517.949 2601.3431 4304.4795 2986.9505 2828.2238 3547.3574 3786.2527 2076.2303 3517.5685 81159381 INF1_elicitin_Oomycetes soil_borne_pathogen oomycete elicitor Phytophthora ramorum superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 896.485 1071.8273 942.5949 883.7643 918.8776884 1475.4154 1259.4375 1010.021 941.555 840.5021 206595436 alkK Organic Remediation Others Ralstonia solanacearum IPO1609 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 2553.7752 2525.3323 2992.2116 1958.1434 2419.8624 2109.5246 2196.3651 4316.5167 2492.022 2341.7496 2234.8647 2602.9667 33413585 endochitinase Carbon cycling Carbon degradation Chitin Trichoderma atroviride superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Hypocreaceae;genus:Hypocrea; 3381.7689 3067.2605 3404.4642 3140.2124 4256.7949 3770.196 2342.7481 2734.8393 2810.1778 3023.439 4559.0769 3642.4643 92394373 CopA Metal Resistance Copper Psychrobacter cryohalolentis K5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Psychrobacter;species:Psychrobacter cryohalolentis; 998.2077 612.9721713 829.1249 868.7433642 463.4919685 438.4047166 1175.3854 485.5976 566.1613 843.0953296 735.1475 229213768 obgE Stress Radiation stress Dethiosulfovibrio peptidovorans DSM 11002 superkingdom:Bacteria;phylum:Synergistetes;class:Synergistia;order:Synergistales;family:Synergistaceae;genus:Dethiosulfovibrio;species:Dethiosulfovibrio peptidovorans; 1305.2835 2797.3986 2080.455 1522.384 1831.4532 1759.6222 1995.6246 3249.4162 1715.6553 2770.6753 1320.1039 2256.0051 158304027 ArsC Metal Resistance Arsenic Acaryochloris marina MBIC11017 superkingdom:Bacteria;phylum:Cyanobacteria;genus:Acaryochloris;species:Acaryochloris marina; 2276.8416 1217.6021 1074.2063 2136.1016 962.4808 1481.5549 2362.7751 2362.1367 1078.0159 2052.6391 959.4946 1080.4612 110283656 AceA Carbon cycling Carbon degradation Others Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 1172.1493 1422.7318 1139.9102 1127.8542 898.7310405 687.8098 808.869 1401.543303 692.72145 676.78735 1531.5444 956.4718 85724083 silC Metal Resistance Silver Syntrophus aciditrophicus SB superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Syntrophobacterales;family:Syntrophaceae;genus:Syntrophus;species:Syntrophus aciditrophicus; 468.5857 767.2802 501.4539533 681.7258 506.3703928 821.0404 687.9728 498.0182 686.0292 740.5254 815.4910628 635.9863 220694706 cellobiase_fungi Fungi function carbon degradation Aspergillus flavus NRRL3357 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus flavus; 8256.4167 7203.3283 4976.0226 7196.4878 6933.0851 5286.285 5758.2952 4168.9051 5465.448 4229.2481 6956.9966 7256.3515 242207992 iron_permease_high_affinity Fungi function iron Postia placenta Mad-698-R superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Postia;species:Postia placenta; 15688.6277 6367.3274 7372.3479 14818.0098 9404.1761 8524.1119 10427.6528 14306.0397 9356.7868 10083.6166 10290.8188 10411.3036 221729791 CopA Metal Resistance Copper Diaphorobacter sp. TPSY superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax ebreus; 606.1593 453.5517629 426.7263814 16132294 AceA Carbon cycling Carbon degradation Others Coccidioides immitis superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Coccidioides; 1314.2563 1494.5106 1065.0755 1469.1554 875.8926 1358.3899 978.6742 953.4293 1157.415 1398.542 1176.6837 171911022 CysJ Sulphur sulfite reductase Verrucomicrobium spinosum DSM 4136 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobiaceae;genus:Verrucomicrobium;species:Verrucomicrobium spinosum; 937.97735 1526.45615 1631.97 1877.8348 1879.18385 2035.87985 1787.97335 1658.9813 1419.15495 1198.3834 2359.9128 1831.17435 86607670 phn Organic Remediation Herbicides related compound Synechococcus sp. JA-2-3B'a(2-13) superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 3456.3181 4595.1353 4276.8576 2733.0945 2864.1791 2298.7067 2590.8033 5109.1973 2978.3884 2950.5556 3442.982 3519.1248 315277587 CysJ Sulphur sulfite reductase Paenibacillus vortex V453 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus;species:Paenibacillus vortex; 1433.938 1589.5637 1551.7848 1618.4311 1726.9862 1727.2568 2250.8372 1008.54615 1331.55495 1487.2259 1765.3519 1293.4636 83721555 vanA Carbon cycling Carbon degradation Others Burkholderia thailandensis E264 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia thailandensis; 2677.9165 4845.4841 4654.7581 3581.6288 2042.9468 5164.7801 3943.5101 4939.5721 5647.0549 3917.8605 2322.4104 5218.4984 46850256 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 726.019853 1001.0562 846.8261793 631.9178 13872.89633 587.5956 572.4702414 134293473 fnr Stress Oxygen stress Burkholderia vietnamiensis G4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia vietnamiensis; 3016.3835 1573.2468 4166.9439 2093.064 2039.9954 1873.2751 1695.5635 2150.6871 1640.4032 1639.6591 2965.9574 2226.8102 161389811 CadA Metal Resistance Cadmium Phaeobacter gallaeciensis BS107 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 3603.486867 4392.112433 3862.986233 3670.562233 4101.845 3328.5069 3108.6649 2901.567633 2693.7699 3412.533967 3323.731501 2714.175767 88781172 ppx Phosphorus Phosphorus utilization Polaribacter irgensii 23-P superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Polaribacter;species:Polaribacter irgensii; 934.8476 1639.9796 1418.3704 798.6329891 791.7352158 1211.5084 1945.0477 830.3220921 1088.2598 1461.2867 315182643 pcbC soil_benifit Vibrio furnissii NCTC 11218 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio furnissii; 456.2709041 628.4373 661.9329 624.2455 653.5736 333.522968 433.8879 545.6374 899.9857 260430987 pcc Carbon cycling Carbon fixation Silicibacter lacuscaerulensis ITI-1157 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria lacuscaerulensis; 626.442 809.2797 658.2335698 923.4162 1708.9722 647.3189361 25990955 exoglucanase Carbon cycling Carbon degradation Cellulose Piromyces sp. E2 superkingdom:Eukaryota;kingdom:Fungi;phylum:Neocallimastigomycota;class:Neocallimastigomycetes;order:Neocallimastigales;family:Neocallimastigaceae;genus:Piromyces; 2109.1662 31331.26903 1900.4707 1179.8363 1523.8348 1649.3794 1424.3729 4745.0927 1952.7927 1688.1327 3031.1121 1432.998 158521938 pstA Stress Phosphate limitation Desulfococcus oleovorans Hxd3 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfococcus;species:Desulfococcus oleovorans; 1746.0375 5804.3868 5914.6046 3046.4665 5085.0422 3705.8989 2972.7962 5530.5874 4166.8362 4369.4094 2246.2043 5570.1152 158316224 CDH Carbon cycling Carbon degradation Cellulose Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 2314.9087 1923.1702 1905.6758 2114.9389 2027.874 2112.5158 1277.1869 1608.682 1667.8831 1979.4988 3322.6988 1836.4544 118473535 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 6243.2378 1692.8867 3684.2911 6610.6036 3425.2107 2739.9321 3812.6578 3474.4104 2632.3101 3589.9242 4984.7929 3635.0076 225178397 nplT Carbon cycling Carbon degradation Starch Clostridium sp. M62/1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium; 1543.88135 1625.5614 1656.1128 1579.3246 2779.6765 1725.2153 1482.6416 1602.95065 1370.06635 1407.2909 2491.7598 1785.25335 36783554 pulA Carbon cycling Carbon degradation Starch Photorhabdus luminescens subsp. laumondii TTO1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Photorhabdus;species:Photorhabdus luminescens; 372.5737773 532.1546 613.7718456 411.7593081 423.966592 335.0806686 593.4298 448.7304486 167358732 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Rhizobium leguminosarum bv. trifolii WSM1325 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 2270.1926 2897.5424 2010.0257 1112.691 3465.0258 2131.3009 1733.2202 1956.9704 2585.8425 1931.3603 1040.1567 83749259 catB Organic Remediation Aromatics BTEX and related aromatics Ralstonia solanacearum UW551 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 1909.4817 616.4608739 1131.917183 1732.4082 823.1791 1069.4152 793.6529 997.2654 1358.7671 1078.1541 34017076 pmoA Carbon cycling Methane Methane oxidation uncultured bacterium superkingdom:Bacteria; 4728.5985 5791.8609 6369.6759 5133.531 3938.1231 6491.6721 6319.8775 7002.2611 7252.9306 7146.0922 4465.5491 6919.9501 122088729 dmsA Organic Remediation Others Yersinia enterocolitica subsp. enterocolitica 8081 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia enterocolitica; 894.6716 1002.2147 718.7902364 1042.5469 1145.1731 682.3409 781.8555952 906.8813 697.1996 1066.6739 33591786 bphA Organic Remediation Aromatics Polycyclic aromatics Bordetella pertussis Tohama I superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella pertussis; 1977.58005 2334.3512 2205.7563 2544.643967 1860.2254 6621.245999 2031.78165 2002.8274 1701.895025 2215.90935 2105.02375 1785.6539 220904110 hydrogenase Energy process Energy process Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio desulfuricans; 8389.874676 8812.556545 10859.10466 8019.169657 10876.13757 11261.75556 16537.5104 8115.971676 10083.76143 7699.181499 17965.8868 8626.968869 121530665 ArsC Metal Resistance Arsenic Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 2310.7044 1293.7007 1256.4733 1879.7661 639.978007 932.8985 941.8548 793.8345 996.881 1502.1666 840.0203 1059.6429 197929084 mannanase Carbon cycling Carbon degradation Hemicellulose Streptomyces sviceus ATCC 29083 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces sviceus; 456.4052279 377.7806857 390.5278613 472.0450281 468.8792 519.067302 148259562 glnA Stress Nitrogen limitation Acidiphilium cryptum JF-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Acidiphilium;species:Acidiphilium cryptum; 10795.9672 9272.9613 8822.7779 10947.3632 11456.5459 12011.4247 13369.7891 8857.2167 10827.6747 9025.1489 21057.3066 10494.9748 126460036 APS_AprA Sulphur adenylylsulfate reductase Pyrobaculum calidifontis JCM 11548 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Thermoproteales;family:Thermoproteaceae;genus:Pyrobaculum;species:Pyrobaculum calidifontis; 1103.1408 2893.2991 1771.0257 994.0568 2683.7033 1835.2562 1674.4468 2208.945 2346.6549 2437.8258 3107.253814 184196454 atzC Organic Remediation Herbicides related compound Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 737.0746974 628.374 1048.6519 1117.269 371.9494438 555.944 220931438 fnr Stress Oxygen stress Halothermothrix orenii H 168 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Halanaerobiales;family:Halanaerobiaceae;genus:Halothermothrix;species:Halothermothrix orenii; 589.4361 404.1821171 939.8323 762.3084 790.5744 1063.1754 619.7145 425.5926379 926.3463 736.6423217 118468557 vdh Carbon cycling Carbon degradation Others Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 1516.775 2667.0933 1880.1881 1516.179 2654.6194 2058.4937 1783.196 1515.4428 1980.6104 1945.6198 1502.9071 1812.67 114316333 iro virulence Iron oxidation Granulibacter bethesdensis CGDNIH1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Granulibacter;species:Granulibacter bethesdensis; 1276.8607 1065.3668 1079.1642 1300.7855 1380.9178 1343.1793 1551.0386 1871.8289 1207.587 980.5036 1571.7136 3281.0563 242780882 cat_fun soil_benifit Talaromyces stipitatus ATCC 10500 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus; 575.7351 611.9994 936.6337 543.0438814 485.3512 967.4945 570.3552 498.9058 711.8712 50084865 pcaG Organic Remediation Aromatics Other aromatics Acinetobacter sp. ADP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter; 924.0212 1300.467 605.5696 1127.4022 624.5828909 1327.909 1060.964419 782.3233 912.1001 752.909 999.4541 139478549 mer Metal Resistance Mercury uncultured soil bacterium superkingdom:Bacteria; 1436.0738 1969.209 1217.046148 1610.9659 2071.9739 1665.0985 1534.3379 971.4526 2049.8866 1863.3343 1634.0122 312211588 per_fun soil_benifit Leptosphaeria maculans superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Leptosphaeriaceae;genus:Leptosphaeria; 581.3767 520.2099509 556.8181 645.6935 365.262974 121555348 ChrA Metal Resistance Chromium Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 3739.968 2080.5535 2540.5134 4045.0983 1083.8408 3893.7649 5296.2629 2388.8871 3288.0637 4624.8754 2872.3095 2111.6232 15026876 pcpE Organic Remediation Herbicides related compound Burkholderia cepacia superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 596.3268 1302.4548 703.3912 527.2451 920.9215 423.544016 1061.0878 502.5358591 449.1467179 414.3310182 750.480492 119955831 pcc Carbon cycling Carbon fixation Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 1218.39 850.5783 1267.8703 1008.1884 1039.2256 794.4320039 920.5455 980.3138 1462.9346 90336970 cap virulence capsule Aurantimonas manganoxydans SI85-9A1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Aurantimonas;species:Aurantimonas manganoxydans; 2849.080554 1948.72535 1432.94625 2237.69615 2296.7392 1891.0157 1655.8019 1349.0817 1651.97645 1618.8616 3849.6784 1670.97965 149277880 arsM Metal Resistance Arsenic Pedobacter sp. BAL39 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Sphingobacteriaceae;genus:Pedobacter; 1989.3635 1303.63985 949.63925 1871.5819 1342.05075 1139.3775 1804.0489 1146.4441 1106.54995 1157.98315 1278.0609 1516.86145 110648691 ureC Nitrogen Ammonification Alcanivorax borkumensis SK2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax;species:Alcanivorax borkumensis; 396.0267036 872.1005 610.0061066 449.4158 636.394661 879.3879 497.7925331 404.4153 752.7388045 645.6676 111116458 todC Organic Remediation Aromatics BTEX and related aromatics Pseudomonas putida superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 2843.436 2639.2508 2620.91675 2277.9669 2276.84115 2648.3772 2101.94785 2081.6202 2171.1812 2626.723 3584.7351 2387.41685 83361863 ZntA Metal Resistance Zinc Rhodobacter sphaeroides ATCC 17025 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 3262.1274 1538.2367 2227.2893 3021.5918 2873.2797 1932.4122 1116.3112 2257.9189 1880.9654 1329.560935 3724.4622 2787.5844 165880035 exoglucanase Carbon cycling Carbon degradation Cellulose uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 335.5810174 419.485964 374.6130455 432.4735 360.1767234 264.1088059 336.2354266 194348351 CopA Metal Resistance Copper Stenotrophomonas maltophilia R551-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 1611.2981 2163.6349 1589.3693 1643.4701 883.1336266 2696.4243 7653.6814 4734.3199 2305.7439 1883.3669 1882.7736 149203618 cbdA Organic Remediation Aromatics Chlorinated aromatics Roseovarius sp. TM1035 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 1871.9249 1206.0446 1265.9675 2201.1238 874.5465 1753.2957 2625.1681 886.9406 1331.4035 1034.0579 1367.8408 1229.4709 213583157 ppx Phosphorus Phosphorus utilization Salmonella enterica subsp. enterica serovar Typhi str. E98-0664 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 821.7745 774.5039 793.2361724 511.7169725 468.4574198 473.7548 582.7158 442.6269 1292.884 793.1118 167770669 obgE Stress Radiation stress Anaerotruncus colihominis DSM 17241 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Anaerotruncus;species:Anaerotruncus colihominis; 3219.4933 2585.7575 2513.9643 2563.1904 2758.8968 2177.7253 2229.8467 3261.3147 2112.6511 2697.6914 4972.3482 2546.2246 34582632 exoglucanase_fungi Fungi function carbon degradation Trichoderma viride superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Hypocreaceae;genus:Hypocrea; 26646.0645 35807.3958 40720.4853 17626.0846 27270.5808 35344.535 28541.2183 42270.8471 36183.6814 33833.4377 17472.061 43558.2131 160346438 CadA Metal Resistance Cadmium Burkholderia multivorans ATCC 17616 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 622.778621 475.3821304 505.6191 536.1709 393.9299194 613.7805112 294787646 sped_bac soil_benifit Simonsiella muelleri ATCC 29453 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Simonsiella;species:Simonsiella muelleri; 1198.1878 490.9257 774.1156 563.4405 396.6955153 370.1678 830.7948 417.242279 120325254 atzA Organic Remediation Herbicides related compound Marinobacter aquaeolei VT8 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter hydrocarbonoclasticus; 1002.3315 971.3522 1090.7086 922.1448 1443.1999 1001.2188 873.6872 1041.5 913.3698 914.0744 1500.6008 1083.1527 99038912 oxyR Stress Oxygen stress Ruegeria sp. TM1040 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 698.5466 498.03 457.1810753 852.8079 712.156833 593.301 463.9707 463.9447 560.3937329 655.666 553.4941844 190994620 Arylest Organic Remediation Aromatics Other aromatics Geobacter sp. M21 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 621.0055476 621.0212 510.6865567 756.9389 765.2623995 606.1901 599.5009 519.1282 212696749 ChrA Metal Resistance Chromium Anaerococcus hydrogenalis DSM 7454 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XI. Incertae Sedis;genus:Anaerococcus;species:Anaerococcus hydrogenalis; 1614.1054 1323.3653 1262.1582 1550.2311 1883.5161 1421.8345 1087.1826 1272.8853 1120.4995 859.8018 2254.7571 1734.7527 313902822 spe soil_benifit Thermaerobacter subterraneus DSM 13965 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XVII. Incertae Sedis;genus:Thermaerobacter;species:Thermaerobacter subterraneus; 3773.401 2299.0628 2334.5761 2979.1295 2658.8094 2626.9374 1770.3838 1462.8861 2927.203 2292.4721 3948.1793 2166.4016 171689570 pheA Organic Remediation Aromatics Other aromatics Podospora anserina superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Lasiosphaeriaceae;genus:Podospora;species:Podospora anserina; 2642.4082 2348.6759 2536.26785 2924.2024 1782.9073 2212.04995 3103.86655 3576.859 2464.20435 3298.8316 2211.3206 2432.0607 157316835 GcdB Organic Remediation Aromatics Aromatic carboxylic acid Shewanella sediminis HAW-EB3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella sediminis; 3105.8158 2218.8229 2735.4879 2793.6102 4258.4255 2840.5879 2016.4545 2572.6421 2252.8926 2347.612 5157.2655 3436.9185 110623048 arsB Metal Resistance Arsenic Zimmermannella faecalis superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Pseudoclavibacter; 912.3216 1005.2984 1199.682 965.6755 1390.4544 1105.6585 940.4325 855.9899 874.1012 746.7228 1737.099 18178.82204 56068670 merP Metal Resistance Mercury Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 469.2465781 629.5857385 474.5637345 1266.5728 1416.5961 366.9067361 474.1569107 82716369 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Pseudomonas putida F1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 796.0696872 824.4816 905.8245 1158.0709 586.4805476 758.4633 814.0535 803.6252 1055.8101 1174.6349 261196714 vdh Carbon cycling Carbon degradation Others Ajellomyces dermatitidis SLH14081 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces dermatitidis; 1484.5106 1137.075 1467.5802 722.7274087 904.4504 1071.0466 1142.6791 1129.1849 1942.9658 686.4938 224610124 fnr Stress Oxygen stress Thioalkalivibrio sp. K90mix superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Thioalkalivibrio; 580.2651551 911.2478815 784.1145 853.6161 661.8572729 813.5772 1062.3266 798.3373 1022.4271 1121.5582 1263.2937 89352828 phn Organic Remediation Herbicides related compound Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 2333.8348 2248.615 1130.9684 1616.2258 1536.4049 1374.6474 1055.8803 1159.323 1375.2967 968.3098 2817.1731 1167.5655 227949986 hly virulence hemolysin Meiothermus ruber DSM 1279 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Meiothermus;species:Meiothermus ruber; 566.937 1273.6439 684.7102271 875.8608 997.8783 1205.1627 873.9511 771.6353 1197.3476 1157.6928 1130.6941 25028373 oxyR Stress Oxygen stress Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 1376.9918 1834.7687 2297.99475 1598.7751 2210.1699 1510.222548 1452.1079 1978.32835 1581.9663 1604.5462 3307.1308 2228.4718 34496390 pstB Stress Phosphate limitation Chromobacterium violaceum ATCC 12472 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Chromobacterium;species:Chromobacterium violaceum; 7335.1761 2405.272 6224.0775 6952.8225 4439.7734 3744.7105 4238.1229 6083.6074 3886.4113 5424.7282 7141.0251 4774.8337 227342473 xylA Carbon cycling Carbon degradation Hemicellulose Rhizobium sp. NGR234 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium fredii; 1538.4413 1545.2132 636.4514 1555.9019 1472.0183 939.9429 978.7431 964.8195 1076.9908 1177.0778 1298.0733 3486.8355 49650361 protease_aspartate_fungi Fungi function carbon degradation Yarrowia lipolytica superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Dipodascaceae;genus:Yarrowia; 706.516045 780.507 1041.3146 779.776 698.5139 747.9392362 1003.7073 725.1939 793.7435 224520874 mannanase Carbon cycling Carbon degradation Hemicellulose Bacteroides cellulosilyticus DSM 14838 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides cellulosilyticus; 884.3825 1470.5801 1841.6149 769.3763 917.3761 1317.29 1343.5881 1596.1662 1787.8438 1514.807 1715.8295 72121176 pobA Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 2444.14755 2365.84015 1872.30285 2045.739 2514.39465 2520.471 2942.7213 1990.51735 2363.15565 2407.30225 2234.3962 2402.8383 255944557 chitin_synthase Fungi function major biomolecule Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 871.6352 13001.3804 1298.4488 954.4435 1515.0692 863.9649 1812.2271 545.3459 1068.9297 825.0666 1511.556 1007.8171 182416248 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 635.0289468 623.6334 842.1923 1124.0708 816.0458 558.3918 675.1012 714.961 119473327 pec_CDeg Fungi function carbon degradation Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 779.7001 914.0829 606.1005871 1125.1188 77019931 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rhodococcus erythropolis PR4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus erythropolis; 2628.2036 2837.1936 4070.9833 2051.5879 2159.3394 2871.7568 2368.6135 4228.906 4241.6456 3017.398 2157.9139 3425.7815 28853001 phn Organic Remediation Herbicides related compound Pseudomonas syringae pv. tomato str. DC3000 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 1145.7347 2335.3196 1352.4484 1915.7906 1362.8493 2365.7707 2901.4018 6242.9964 2099.1966 1588.6954 2226.5282 1167.332 146343127 catB Organic Remediation Aromatics BTEX and related aromatics Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 3510.0876 2974.5202 2534.2614 3099.3253 1321.5744 4186.3697 2355.0327 2427.415 2218.6914 2609.5658 2010.0665 2039.295 67782665 dsrA Sulphur sulfite reductase Chlorobium limicola DSM 245 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium limicola; 1139.8916 1084.5826 1466.7288 1460.0329 2001.1411 1382.1853 1034.4425 1480.873 1102.7466 932.2199 2135.2587 1734.8625 133911774 chnB Organic Remediation Other Hydrocarbons Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 1560.3628 2479.7395 1616.1947 1436.2951 2727.879 1805.3436 1667.7367 2137.6024 1890.0283 1823.7045 1337.3055 1604.4876 121533293 sigma_24 Stress Sigma factors Thermosinus carboxydivorans Nor1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Veillonellaceae;genus:Thermosinus;species:Thermosinus carboxydivorans; 3049.1449 1057.39 1631.0104 3170.6483 1581.1305 1544.3713 2766.0454 2837.6288 1362.1101 2100.0407 1785.6767 1769.729 219847711 hly virulence hemolysin Chloroflexus aggregans DSM 9485 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aggregans; 2746.6227 3033.3525 1975.9742 3173.7987 1339.7187 3036.0367 6035.5191 2171.6033 3355.0335 2339.9965 1753.0513 2021.8549 133914530 pimF Organic Remediation Aromatics Aromatic carboxylic acid Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 2157.912 3793.5097 2637.0701 2018.8097 4012.2548 2544.3338 3284.0409 1979.3149 2724.3251 1885.3098 2101.6002 1903.0014 157315744 dmsA Organic Remediation Others Shewanella sediminis HAW-EB3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella sediminis; 1863.9999 3639.0572 2116.3966 1088.8163 2432.9634 2007.4479 3135.5129 2600.7119 935.4329 2548.8091 1298.4097 1486.5267 224535455 pstB Stress Phosphate limitation Bacteroides cellulosilyticus DSM 14838 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides cellulosilyticus; 4951.5746 2128.1596 3054.3534 4026.8121 3747.2764 2733.2915 2667.7914 3510.4448 3301.7279 3042.489 6263.4303 3303.4812 259166319 phoB Stress Phosphate limitation Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 3534.1583 18813.81806 3318.8848 3484.2257 4176.1221 3409.9888 2756.181 2984.9741 2838.3216 3336.7138 4903.3975 3503.6439 167628363 ppk Phosphorus Phosphorus utilization Heliobacterium modesticaldum Ice1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Heliobacteriaceae;genus:Heliobacterium;species:Heliobacterium modesticaldum; 578.6365 352.1923621 462.2272 510.9789758 38194122 Xamo Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 2215.738 1825.5367 2331.0721 1950.4317 1941.2479 1508.8801 1250.8054 1683.2686 1686.2884 1720.9955 2629.4688 2024.3542 163259941 ahpC Stress Oxygen stress Bordetella petrii superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella; 1101.5424 498.6046867 875.5824 928.0621 791.4469 714.4768 720.5712 820.8755 537.8314 908.8708 782.5104 238795924 iuc virulence aerobactin Yersinia mollaretii ATCC 43969 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia mollaretii; 764.3246 528.6138009 836.2052434 474.1460393 70992365 pheA Organic Remediation Aromatics Other aromatics Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 877.8947 1075.11755 1065.8315 1076.6665 944.011 1152.9873 1124.7398 1204.2011 1322.7959 213968723 atzA Organic Remediation Herbicides related compound Pseudomonas syringae pv. tomato T1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 910.6157 2772.1811 1905.545 1629.4987 1138.3495 2393.4099 2396.3141 1893.2293 2841.2338 2368.5268 684.2847876 3206.5171 26986207 sox Sulphur Sulphur oxidation Pelodictyon phaeoclathratiforme superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Pelodictyon; 7140.3943 8400.4404 11338.676 5257.2059 9214.1447 6036.9411 6413.5204 8401.6482 4948.5963 7940.3283 6760.2111 5418.9221 115399806 pec_CDeg Fungi function carbon degradation Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 584.7650006 436.8286249 704.45 377.5320594 475.48 370.7930411 495.7178561 83855231 pstB Stress Phosphate limitation Sulfitobacter sp. NAS-14.1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sulfitobacter; 3939.1958 7347.4848 5062.1109 4800.4346 2722.6462 4560.0077 9286.1013 2922.1166 5384.9189 4213.6039 4916.4429 3062.9866 220932303 ArsC Metal Resistance Arsenic Halothermothrix orenii H 168 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Halanaerobiales;family:Halanaerobiaceae;genus:Halothermothrix;species:Halothermothrix orenii; 912.0985399 17269.80733 19159.00433 1005.6449 1543.4768 1340.8462 625.645202 1194.3649 872.3888 1081.3478 1261.5085 255273256 sigma_24 Stress Sigma factors Hyphomicrobium denitrificans ATCC 51888 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Hyphomicrobiaceae;genus:Hyphomicrobium;species:Hyphomicrobium denitrificans; 4306.8378 4501.3204 5563.665 3398.9312 8431.6088 3644.7277 5693.2819 3810.8607 4317.2123 3760.8155 4713.7233 3531.7266 311330964 Cyanide_hydratase_Fungi soil_borne_pathogen fungi virulence Pyrenophora teres f. teres 0-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora teres; 1244.5829 1786.2641 1389.0152 1306.374 2757.1525 1525.8255 1138.8101 2210.9059 1675.5364 1778.9159 23262.87747 77973654 CadA Metal Resistance Cadmium Yersinia frederiksenii ATCC 33641 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia frederiksenii; 2479.838006 3659.2796 4746.3424 2820.206558 4016.4259 4052.1968 7371.0436 4483.2168 4452.3633 3581.5829 9156.4971 4851.5152 108765209 glnA Stress Nitrogen limitation Rubrobacter xylanophilus DSM 9941 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Rubrobacterales;family:Rubrobacteraceae;genus:Rubrobacter;species:Rubrobacter xylanophilus; 1513.6184 1004.9544 1210.4994 1485.9623 1437.8343 1560.4493 1664.3874 1460.3684 1191.2086 1317.1051 1967.5429 2165.2755 149122711 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 1932.7195 3008.6702 2152.2655 2103.0221 3643.2833 2469.1336 2235.9144 4139.3586 2945.1074 2670.7244 2275.3942 2825.6367 196200199 amyA Carbon cycling Carbon degradation Starch Cyanothece sp. PCC 7822 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 742.618 1171.6907 889.6275 676.1225105 1059.383 675.2265861 970.5877 674.6074 734.7916 632.289 1335.3115 819.7251 109457038 pcaG Organic Remediation Aromatics Other aromatics Roseobacter denitrificans OCh 114 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter denitrificans; 2690.7847 2143.4762 2262.2131 2634.0066 3300.7793 2208.4006 3929.5509 1853.5515 2038.2532 2055.654 2714.8523 2379.3766 157804768 APS_AprB Sulphur adenylylsulfate reductase Thiobacillus thioparus superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Hydrogenophilales;family:Hydrogenophilaceae;genus:Thiobacillus; 721.9095464 1597.343 1441.5609 720.8722571 1112.0449 1531.3672 1578.4577 1236.2084 1761.3623 1724.577 116205281 ABC_multidrug_fungi Fungi function metal resistance Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 378.9272906 992.6323 907.5983 636.7294 599.1771576 1032.1783 868.3536 945.0693 1140.6405 1140.5635 570.0076879 1295.7844 83590236 dmsA Organic Remediation Others Moorella thermoacetica ATCC 39073 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Moorella;species:Moorella thermoacetica; 11077.3872 12277.2991 9810.8523 7982.2737 14298.0304 12631.6171 10101.8639 8526.5522 13116.0849 11399.1584 11045.9841 9891.6441 256007413 gyrB other category gyrB Acidimicrobium ferrooxidans DSM 10331 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Acidimicrobiales;family:Acidimicrobiaceae;genus:Acidimicrobium;species:Acidimicrobium ferrooxidans; 362.8353057 1124.7216 783.0992469 674.4935 734.8513575 966.7445 892.464 972.0699 1191.4299 909.4738 926.7249664 999.6875 222438553 xylA Carbon cycling Carbon degradation Hemicellulose Labrenzia alexandrii DFL-11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia alexandrii; 1077.2434 1194.793 1501.5945 808.4279 913.8748 827.8305 1152.7235 2280.2997 1377.545 841.928 1784.8599 997.6963 241662903 AceB Carbon cycling Carbon degradation Others Ralstonia pickettii 12D superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 2160.1955 3124.6912 2242.643 2894.2185 2060.3896 2805.7398 2289.5263 2026.1221 3015.8048 2777.0625 2025.9468 2625.6388 93353268 TerC Metal Resistance Tellurium Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 2022.4473 953.4617 2728.6689 2403.9704 25173.47945 1614.3817 2715.0488 1547.6281 1257.8754 1331.7889 2653.3919 149921995 phtA Organic Remediation Aromatics Aromatic carboxylic acid Plesiocystis pacifica SIR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Nannocystaceae;genus:Plesiocystis;species:Plesiocystis pacifica; 3602.5153 1368.8435 2911.0667 3261.5313 1532.7647 2149.054 2155.4049 2007.2031 1963.9291 2529.48 2399.6254 2382.2604 84393922 oxyR Stress Oxygen stress Vibrio splendidus 12B01 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio splendidus; 1635.8658 1188.7402 1554.2565 1566.5448 1710.2512 1960.0963 1675.4676 1590.4167 1005.3265 1426.9048 1878.2195 1501.0144 150032754 fnr Stress Oxygen stress Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 1151.121 374.8486818 686.8308 587.403775 659.6958896 486.5543956 648.6184 627.2434 490.531 506.9983 225420804 xylanase_fungi Fungi function carbon degradation Bispora sp. MEY-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;genus:Bispora; 927.4383118 1647.7271 2009.9383 1119.3286 1196.6544 1225.951704 1289.3742 1481.9442 193888337 thmAB Organic Remediation Others Rhodococcus sp. YYL superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 4245.7074 1541.314 2928.6304 3232.6159 2534.1315 2081.661 2251.9613 2209.7802 2693.2807 3105.3151 2463.7952 2300.8413 154248122 SMR_antibiotics Antibiotic resistance transporter Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 1748.2941 735.22 669.6015 2107.3642 1122.4803 979.1134 944.795 2163.3361 517.5156 977.5892 1156.6886 1138.3156 12005501 protease_serine_fungi Fungi function carbon degradation Penicillium citrinum superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium; 1196.4282 762.5018 696.5286 1073.6531 1478.4835 760.4375 1250.0139 902.0104 607.3173 699.2431 864.3332 1256.9219 145589107 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Polynucleobacter sp. QLW-P1DMWA-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Polynucleobacter;species:Polynucleobacter necessarius; 429.4061547 586.4379 821.3355 523.3276 424.0525261 527.1373 510.0042365 619.6652 619.269 311333491 metalloprotease_fungi Fungi function carbon degradation Pyrenophora teres f. teres 0-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora teres; 1479.7556 544.6678 952.6562 1404.5168 1124.5849 778.4897 904.2669 1508.4465 1101.7913 1027.8382 1867 1109.203 255505514 nplT Carbon cycling Carbon degradation Starch Bryantella formatexigens DSM 14469 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;species:Marvinbryantia formatexigens; 15810.15353 11762.7738 15100.36805 10920.04082 6857.9295 10210.26891 9062.1107 13768.5374 16465.03582 10844.9675 13344.10565 11118.2381 148260365 ABC_transporter_III Bioleaching other category Acidiphilium cryptum JF-5 802.6604 872.4318 908.124691 1126.3612 1342.1623 825.8105 1005.21697 1098.5529 717.5672 876.5633 98977094 pcc Carbon cycling Carbon fixation Sphingopyxis alaskensis RB2256 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingopyxis;species:Sphingopyxis alaskensis; 561.4195334 1030.8059 644.7973 1235.3275 575.3043582 937.0602 794.3187 693.9815 529.3902 754.4552 70730495 pimF Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 1051.5071 2474.0308 1321.0286 1590.7484 1548.5959 2534.0439 2069.1373 1413.6217 2062.5607 2451.46 703.8006919 2359.3411 91687663 nahA Organic Remediation Aromatics Polycyclic aromatics Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 3723.204425 3406.74445 4472.7347 3685.706025 2511.820875 3372.300125 3290.4929 4358.3945 3444.72155 4068.2502 3071.984 3792.297925 220925098 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 5615.5599 2747.9575 4293.7573 5334.0627 3648.8764 4097.8135 4056.1593 4651.1757 3864.0687 4565.4252 3182.0347 4185.2765 84713304 pcpE Organic Remediation Herbicides related compound Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 6505.6108 11195.2268 8894.792 6741.4423 15163.0592 6733.6199 10240.906 6136.8057 8943.7039 5419.1338 8680.1373 4577.6647 220721198 nagG Organic Remediation Aromatics Aromatic carboxylic acid Variovorax paradoxus S110 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Variovorax;species:Variovorax paradoxus; 2582.2383 3555.2239 4961.3959 1965.6633 1441.3608 3355.7423 3079.7447 3876.5748 4525.6933 3913.9076 1533.7787 3746.0886 226094384 obgE Stress Radiation stress Brevibacillus brevis NBRC 100599 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Brevibacillus;species:Brevibacillus brevis; 2113.075 2637.4541 2641.5192 1679.8371 3935.3739 2319.0023 2328.6741 2139.527 2164.1976 2186.3797 2380.5259 1949.3893 39578047 CODH Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 669.0896 440.870822 298.9257878 160945268 CopA Metal Resistance Copper Faecalibacterium prausnitzii M21/2 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Faecalibacterium;species:Faecalibacterium prausnitzii; 825.9117 1332.438 802.2478118 1087.198312 1307.0898 2164.2828 897.3623 1107.9886 898.0950041 810.3980994 62906756 dsrA Sulphur sulfite reductase uncultured prokaryote 925.2972 819.015 770.9126 1151.8112 933.3969 937.505 912.9728 671.4482 729.4447 1083.2126 701.3982318 773.7492 121999021 pilin virulence pilin Halorhodospira halophila SL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Halorhodospira;species:Halorhodospira halophila; 1259.0361 1605.0013 1859.7892 1318.469 2028.0384 1665.3228 1421.9985 1874.2135 1349.5293 1762.0211 1646.1899 1936.7143 193222646 Catechol Organic Remediation Aromatics Other aromatics Cupriavidus taiwanensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus; 1129.01815 1035.8487 1190.52945 1137.68905 1583.5573 1015.81615 958.8938 1390.461781 1045.8357 1307.6694 1575.34125 1110.26725 72121973 proV Stress Osmotic stress Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 2535.4536 3687.7337 2115.9168 1952.4315 4052.7651 2812.0065 3063.044 2927.8178 2497.2524 3323.8947 1593.6721 2292.904 172041493 grpE Stress Heat shock Corynebacterium urealyticum DSM 7109 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium urealyticum; 707.7477 634.2877531 508.156678 683.6698354 619.1983922 638.5390805 863.3526 489.5600073 530.0716407 871.5079 810.8814 133909384 cydB Stress Oxygen limitation Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 3173.0579 2311.2447 2259.7414 2501.9214 3966.9922 3235.5386 1918.1662 3874.7955 4412.4307 2566.4074 2275.0819 5728.408 161984776 contractile_tail_sheath_protein Bacteria phage STRUCTURAL Synechococcus cyanophage syn9 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 2013.085 3317.0273 3627.6307 2953.2959 3479.4308 3003.9494 1156.5753 2885.9424 3108.4046 2032.2172 1469.8145 221734661 ppx Phosphorus Phosphorus utilization Agrobacterium vitis S4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium vitis; 2936.9315 995.716 1269.0063 1826.606 1461.4768 938.2379 1559.3774 1100.0363 1223.4179 1713.6145 1653.4453 1283.4253 187735554 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Akkermansia muciniphila ATCC BAA-835 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobiaceae;genus:Akkermansia;species:Akkermansia muciniphila; 1900.388 1931.8478 2417.9165 2312.0326 2887.0254 2264.2324 1776.7956 1955.4936 1652.9957 1694.2854 2927.5181 2564.4612 182677824 Arylest Organic Remediation Aromatics Other aromatics Beijerinckia indica subsp. indica ATCC 9039 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Beijerinckia;species:Beijerinckia indica; 2476.43205 4116.68 3674.54965 3153.76605 3205.31805 4142.85435 3857.4146 4870.08745 4157.27825 4092.84435 1789.6648 4687.3518 118728500 endoglucanase Carbon cycling Carbon degradation Cellulose Clostridium cellulolyticum H10 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium cellulolyticum; 1484.1614 668.3104604 1063.595917 1194.093636 951.5791 726.9803 1029.6365 1089.0698 774.3724154 842.1513 1058.2148 23492828 BADH Organic Remediation Aromatics Other aromatics Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 4076.1381 3030.9315 3973.4815 4747.3293 3439.3356 3551.0415 4768.9536 2824.0357 3527.9153 3443.5767 3439.7226 4422.187 39578181 CODH Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 2900.0464 1891.5559 3324.0317 2845.5923 1273.7395 1571.5768 1597.6995 2298.5287 2128.7849 1990.7435 2390.6883 1850.9283 154287478 glucoamylase_fungi Fungi function carbon degradation Ajellomyces capsulatus NAm1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces capsulatus; 874.456 601.6604147 741.5429 678.8008115 493.9726601 620.6587 438.8078701 790.2652316 611.85647 111020867 xylJ Organic Remediation Aromatics BTEX and related aromatics Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 2535.7894 2457.7076 2474.0389 3294.8437 1619.4225 2964.6354 2973.1977 1688.0134 2351.8038 2976.1826 2596.7713 2872.2443 118051441 ureC Nitrogen Ammonification Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 2751.5658 1026.0178 1158.7388 2212.616 1559.1185 1163.0907 1671.8086 2478.6282 1108.1284 1518.2686 1583.3895 1644.1741 115422024 ppx Phosphorus Phosphorus utilization Bordetella avium 197N superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella avium; 1385.528 1327.2518 1963.4848 1417.913 1420.619 1196.0693 1086.6664 2917.6381 1158.4285 1922.3936 1375.936959 2116.7591 119448330 pimF Organic Remediation Aromatics Aromatic carboxylic acid marine gamma proteobacterium HTCC2143 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 2996.8396 7752.6598 6074.1464 3521.1405 10007.3738 4900.2333 6690.0791 7212.4155 5968.2393 8499.7116 2926.4369 8169.7724 77974242 Arylest Organic Remediation Aromatics Other aromatics Yersinia frederiksenii ATCC 33641 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia frederiksenii; 584.7515682 1635.1629 1282.877 759.3223 1278.2329 1230.045 1311.3108 3315.8807 754.8977 1373.1718 950.125 1875.674 157148595 gyrB other category gyrB Citrobacter koseri ATCC BAA-895 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter;species:Citrobacter koseri; 2068.7887 3941.3998 5354.0929 4757.1093 1993.1401 4914.1127 5928.6051 5124.4769 10772.0277 4987.3719 7630.0939 4741.7525 77465140 ArsC Metal Resistance Arsenic Rhodobacter sphaeroides 2.4.1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 1495.7938 2248.3856 2280.4602 1738.0241 4681.1473 1505.9785 3267.0305 1347.1813 1945.4656 1352.592 1825.4614 1667.1071 260911782 sigma_24 Stress Sigma factors Prevotella sp. oral taxon 472 str. F0295 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Prevotellaceae;genus:Prevotella;species:Prevotella sp. oral taxon 472; 914.6186 762.7821 1013.1841 836.1791 796.7541332 1018.583 692.32 1394.5332 668.4393 688.7131 1642.7543 982.4534 170775785 pstB Stress Phosphate limitation Leptothrix cholodnii SP-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Leptothrix;species:Leptothrix cholodnii; 4836.9703 9158.3293 7109.634 6684.5154 7452.7659 9857.6744 7850.1894 7935.1011 8646.889 9925.3545 4930.4012 10173.0611 170141228 tfdA Organic Remediation Aromatics Chlorinated aromatics Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 1112.7046 816.3391 1097.4404 1236.3568 1025.9194 659.8665909 548.372 888.3595 751.7142 752.9558781 115523078 sigma_70 Stress Sigma factors Rhodopseudomonas palustris BisA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 485.2042393 480.268104 818.3986 724.4621 595.3473381 395.875086 574.062 400.4478606 634.8302173 846.6849 974.3897751 878.7467 20142095 dsrA Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 755.6876 368.8724085 656.3851 650.5502 792.6223 560.198618 458.7518 619.1369606 625.3926 536.8159 653.4211032 296826400 glnA_fungi Fungi function nitrogen Arthroderma otae CBS 113480 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma;species:Arthroderma otae; 3282.84 750.2434 1201.7176 2564.6972 1026.7347 1180.0661 1976.3546 2226.6293 973.3696 1303.013 923.3376 1555.3121 86574581 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris HaA2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 4158.3706 3606.8567 3906.5271 3885.3988 5080.6247 4647.3374 3570.4983 4427.6097 4585.7086 4365.4676 4144.2441 4490.2857 196114420 narH Stress Oxygen limitation Alteromonas macleodii 'Deep ecotype' superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Alteromonas;species:Alteromonas macleodii; 1196.9117 1477.9835 1035.822 1622.8691 1799.715 1309.8866 1398.8516 969.7701 1434.1355 1814.4141 900.4421 116512871 cadBD Metal Resistance Cadmium Lactococcus lactis subsp. cremoris SK11 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Lactococcus;species:Lactococcus lactis; 580.0066 416.3512876 496.0515689 472.906 441.4597 467.9301 479.6281292 218273880 cda Carbon cycling Carbon degradation Starch Roseburia intestinalis L1-82 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Roseburia;species:Roseburia intestinalis; 976.5683 862.6582 1515.6396 1125.0599 574.3663 1055.9147 1542.629 921.3027 937.2336 723.3807419 780.4231 113526718 benAB Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 5018.4943 3311.3314 3935.1845 4503.0613 4110.9392 4075.2893 3926.3392 5742.739 3687.7387 4106.3167 4664.9293 4989.3193 19909599 gyrB other category gyrB Halomonas halmophila superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Halomonadaceae;genus:Halomonas; 558.4478 1131.5517 1168.8937 824.262 476.1241905 947.3265 1098.2091 979.0341 115518788 fnr Stress Oxygen stress Rhodopseudomonas palustris BisA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 3282.9341 2084.835 2887.3819 2899.7112 3405.0757 2148.6502 2295.8234 2944.1948 1972.7474 2316.7368 4092.8314 3476.7835 209874700 AceB Carbon cycling Carbon degradation Others Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 2419.5866 2709.2456 1106.8329 2865.7551 3614.9009 2153.2269 4178.6613 1402.4615 2450.7731 1982.4021 1324.1081 2377.8248 29466074 norB Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3282.5042 545.2298126 1491.9984 2561.1084 873.9572274 930.2811 2089.9443 918.8837 817.1588328 1112.3124 146232455 silC Metal Resistance Silver Dichelobacter nodosus VCS1703A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Cardiobacteriales;family:Cardiobacteriaceae;genus:Dichelobacter;species:Dichelobacter nodosus; 6466.6034 4673.7909 6376.4223 6465.3002 3714.7797 6294.2042 6356.7657 7266.6548 5021.0294 6284.6453 4095.354 5434.0276 99030579 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 2246.2293 2218.3642 2295.5231 2111.5283 2929.2103 1723.4131 2167.1275 1634.8757 1823.3731 1690.1091 2517.0097 2120.151 24378476 proV Stress Osmotic stress Streptococcus mutans UA159 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus;species:Streptococcus mutans; 3116.4542 7940.3831 6012.1645 3149.0473 10628.7725 6144.073 4915.4399 5169.3233 5274.883 6628.304 2395.7815 4770.0411 225388598 sigma_70 Stress Sigma factors Clostridium asparagiforme DSM 15981 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium asparagiforme; 840.8081 1319.224 709.3111169 866.1493 1451.5231 1164.4068 1194.4407 848.09495 958.48335 740.9427254 990.6379 266622690 ara Carbon cycling Carbon degradation Hemicellulose Clostridium hathewayi DSM 13479 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium hathewayi; 2178.0336 2640.0026 2495.0193 2040.2052 3078.82 2045.5715 1924.1536 2272.795 1780.1672 2308.0158 2861.9069 2446.2119 192283217 CopA Metal Resistance Copper Rhodopseudomonas palustris TIE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 3037.5125 2087.0522 2156.4383 2981.8416 1278.723646 2424.9377 1983.5465 2420.5761 1896.6682 2290.8865 2018.8887 46520007 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 574.274316 1082.582 1006.164762 1081.450023 614.8634501 661.7748 878.6661018 642.9048 865.4892 1299.08226 926.1233 253998437 iro virulence Iron oxidation Methylovorus sp. SIP3-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Methylophilales;family:Methylophilaceae;genus:Methylovorus;species:Methylovorus glucosotrophus; 973.1028 1092.1262 802.187 1065.9688 617.643713 1184.3735 1920.2538 985.0215 896.4322 903.1759 1159.6676 618.0793 117919359 katE Stress Oxygen stress Shewanella sp. ANA-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella; 2732.9352 868.0611 970.089 2112.898 1507.7191 715.778 2039.2344 1160.8966 890.8874 1082.7213 1304.9444 1333.0952 15055579 dsrA Sulphur sulfite reductase Desulfobotulus sapovorans superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfobotulus; 559.0151383 997.4108 735.7561 430.087938 1441.0195 744.0454 689.1657 894.9778 987.2357 831.4315 767.7481 206676746 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rhodobacterales bacterium HTCC2083 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 518.3792 665.5564 611.7634 954.3472 366.6507134 406.2411 655.8458 369.6313122 525.0911 759.9702095 868.5024 56695679 pimF Organic Remediation Aromatics Aromatic carboxylic acid Silicibacter pomeroyi DSS-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria pomeroyi; 4093.0493 4025.0292 4483.6866 3599.915 1897.9064 3284.1765 2866.3411 7792.5007 3306.1895 3121.5251 3318.6146 4031.5429 56312194 pimF Organic Remediation Aromatics Aromatic carboxylic acid Azoarcus sp. EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 1650.9368 624.5254 1062.691 883.8054 1000.6274 807.0712 639.924 1077.716 791.2191 738.75 1634.61 966.7985 193224376 pimF Organic Remediation Aromatics Aromatic carboxylic acid Cupriavidus taiwanensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus; 9684.8341 11676.3857 11372.553 8927.7317 15941.5188 10975.1334 9513.0742 9585.785 10184.9796 10636.1995 12234.6494 10685.6622 177672538 ppx Phosphorus Phosphorus utilization Micrococcus luteus NCTC 2665 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Micrococcus;species:Micrococcus luteus; 4282.0686 8926.8226 9668.1618 12227.3011 12710.0366 11735.8401 6475.2876 8261.0934 8601.7027 10438.8995 16891.3624 10692.3911 160428479 pstB Stress Phosphate limitation Clostridium phytofermentans ISDg superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium phytofermentans; 3110.4231 2723.1987 2993.1712 2865.1524 3678.9462 3437.3438 1999.1116 2836.2126 2369.7315 2606.3833 5409.1395 3734.3749 115526876 pstB Stress Phosphate limitation Rhodopseudomonas palustris BisA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 4547.6251 6993.5221 5581.9411 5543.8266 6639.6104 6324.2065 5003.8945 3409.8825 6548.0302 6374.3231 5054.3441 5740.6527 237758579 oxyR Stress Oxygen stress Corynebacterium kroppenstedtii DSM 44385 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium kroppenstedtii; 1586.22 1219.5263 1042.074 1319.8387 1033.7308 1087.3371 1089.9469 850.4462 875.0797 968.5108 971.0024 1069.3654 46123347 tre_fun soil_benifit Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 2923.5664 1437.16905 3002.491 1020.44505 753.7553 2190.0492 1988.0657 2827.3523 1457.708661 1884.718 1046.607726 2434.4433 46101464 nagG Organic Remediation Aromatics Aromatic carboxylic acid Ustilago maydis 521 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Ustilaginomycetes;order:Ustilaginales;family:Ustilaginaceae;genus:Ustilago;species:Ustilago maydis; 1583.8022 529.4672324 1119.6858 1649.3601 855.7955 791.7439 703.1856 583.8097 658.1059 2299.7552 857.4616 124294977 amoA Nitrogen Nitrification Archaea superkingdom:Archaea;phylum:Crenarchaeota; 1260.4465 3893.921 1682.7564 809.8101526 4630.203 1320.8945 2808.5541 1336.4327 1903.9138 1150.926 1763.910244 2571.414839 16120154 sid_arc soil_benifit Halobacterium sp. NRC-1 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halobacterium;species:Halobacterium salinarum; 7134.2961 13091.4337 11871.0829 7745.649 16346.8547 9356.6836 8723.3031 10132.7891 10768.568 10497.3001 7058.3564 10675.8299 114538155 pcc Carbon cycling Carbon fixation Fulvimarina pelagi HTCC2506 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Fulvimarina;species:Fulvimarina pelagi; 1374.4598 3070.3824 1989.2343 2014.7141 1401.3941 2907.7566 2038.1792 1801.8299 2840.698 2431.8182 1463.5068 2346.6661 786175 coat_Carmovirus soil_borne_pathogen structural Melon necrotic spot virus superkingdom:Viruses;family:Tombusviridae;genus:Carmovirus; 743.3165 587.5407501 869.6153 402.3647271 77381501 pcaG Organic Remediation Aromatics Other aromatics Pseudomonas fluorescens PfO-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 2788.1419 1119.459 2276.8834 2562.2316 1492.0207 1333.4578 1549.7883 1420.5453 1515.3286 1950.0529 1754.8051 1684.8905 169016205 amyA Carbon cycling Carbon degradation Starch Arthrobacter chlorophenolicus A6 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter chlorophenolicus; 2623.0321 4514.8402 4097.3288 3296.3915 1462.0077 4438.2635 4016.7705 3623.2324 4230.2879 5138.3199 3166.1064 4324.0282 91795187 nirK Nitrogen Denitrification nitrifying uncultured bacterium superkingdom:Bacteria; 1413.118 1764.6783 2219.278 1150.099 1874.4534 1548.2001 1282.4517 2588.6197 1507.2559 1678.8757 2265.376 1268.7454 220933858 oxyR Stress Oxygen stress Thioalkalivibrio sp. HL-EbGR7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Thioalkalivibrio; 1006.5358 2875.8036 523.1761773 2645.917 608.5220305 1778.3785 735.9156 1295.2336 981.9627 1215.716894 166858377 iro virulence Iron oxidation Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 7217.2942 3004.3377 6820.4 6781.6172 3574.8773 4643.2693 2380.4163 3697.7463 4195.0499 5663.9247 4295.0225 5436.8565 110612673 gyrB other category gyrB uncultured bacterium superkingdom:Bacteria; 667.2263489 1605.7276 1176.2589 1039.0668 1363.3233 1064.5587 1489.5123 2187.8594 1071.7604 1868.683 1421.6002 2746667 ppk Phosphorus Phosphorus utilization Neisseria meningitidis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Neisseria; 1882.7648 990.2495 2043.1903 2021.9875 1163.8385 1012.8555 1800.9705 1123.7962 1174.9003 1620.9115 240866669 fnr Stress Oxygen stress Ralstonia pickettii 12D superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 2343.2643 1600.1719 2229.0776 2441.0359 2137.3464 2340.8385 1882.7805 1897.6836 2106.4772 2151.5292 2432.4911 2165.1931 146303969 ferredoxin_oxidoreductase Bioleaching Electron transport Metallosphaera sedula DSM 5348 480.57007 457.6882399 634.0399546 466.3336 764.639 787.771 126667167 sigma_24 Stress Sigma factors Marinobacter sp. ELB17 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter; 8456.1281 9236.0589 5818.866498 11553.328 4413.1732 11404.4686 9308.1127 5879.1299 4421.608713 10255.8479 8287.6954 6546.2792 111026211 nahA Organic Remediation Aromatics Polycyclic aromatics Rhodococcus jostii RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 2226.2152 1760.0017 1996.693 2175.1396 2571.8231 1956.7311 2056.3824 1765.1176 1391.4887 1870.0528 2971.2428 2128.8573 156533185 CopA Metal Resistance Copper Enterobacter sakazakii ATCC BAA-894 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Cronobacter;species:Cronobacter sakazakii; 1899.2462 1643.4074 2204.9275 1465.1557 1855.4181 1924.8743 1708.261 2395.0966 1509.4808 1771.7359 2129.0363 2092.0546 98978526 gyrB other category gyrB Sphingopyxis alaskensis RB2256 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingopyxis;species:Sphingopyxis alaskensis; 2239.0431 1906.0442 2207.1521 1201.1223 1366.8688 1984.0712 1955.995 2480.226 1951.6278 2214.7536 2427.2887 154504656 atzA Organic Remediation Herbicides related compound Ruminococcus gnavus ATCC 29149 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Ruminococcus;species:Ruminococcus gnavus; 539.8172 952.3021 603.7869 630.8413 1428.1695 795.9835 409.4959466 83723511 pcaG Organic Remediation Aromatics Other aromatics Ralstonia solanacearum UW551 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 8424.8309 4535.3643 7080.7731 7348.2975 6218.9552 5554.7055 5009.4384 5731.1431 5647.183 6813.0864 7294.7986 7011.9432 115257628 nhh Organic Remediation Aromatics Nitoaromatics Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 5623.7536 6653.041 5766.9997 6708.7463 5309.58 6766.4939 9882.9431 5548.5259 6283.9255 5742.7152 6167.0196 5535.441 149924085 AceA Carbon cycling Carbon degradation Others Plesiocystis pacifica SIR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Nannocystaceae;genus:Plesiocystis;species:Plesiocystis pacifica; 1868.6743 2761.8342 1855.3547 1902.1342 3658.2803 2354.4188 1777.7362 3281.1052 2487.4323 2124.2495 1753.3156 2355.4548 120611683 Arylest Organic Remediation Aromatics Other aromatics Acidovorax avenae subsp. citrulli AAC00-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax citrulli; 1330.8183 860.4665 1483.6818 613.3468482 956.305 928.9967 1486.7194 996.6597 1138.0622 1334.1801 84367342 sigma_24 Stress Sigma factors Xanthomonas oryzae pv. oryzae MAFF 311018 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas oryzae; 1476.1154 15615.29276 1445.5738 1606.7197 1580.5617 554.3806647 1678.1172 1016.4563 868.6379 980.9614 986.930617 1417.8787 68232047 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 1769.0336 2459.2749 2416.2299 1940.9804 2073.0925 1794.0366 1405.7108 3153.6109 2145.7457 1945.7985 2891.337 2894.0925 36244728 phospholipase_B_fungi Fungi function virulence Aspergillus fumigatus superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya; 747.4536 1991.1686 1289.5361 1369.5607 1507.1883 1773.726 1467.2371 1212.5213 1352.558 1832.9727 964.0591966 1932.1689 166862496 cytochrome Energy process Energy process Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 4031.7981 5297.437 3186.968 3575.8758 5395.1065 5922.361 3732.1253 4742.684 3865.4665 3782.0765 2954.4977 3687.4377 111620721 INF1_elicitin_Oomycetes soil_borne_pathogen oomycete elicitor Phytophthora medicaginis superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 7970.3894 5581.9783 6070.3952 7302.1094 3262.0829 6484.9716 9729.8577 8153.4259 5374.8542 9050.7089 3193.062 3260.911 77389216 hrcA Stress Heat shock Rhodobacter sphaeroides 2.4.1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 2291.6977 2719.4015 2289.1984 2561.5604 2828.9902 2889.151 2496.3345 2337.9523 2535.5075 2971.3922 3123.3426 2666.465 34496427 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Chromobacterium violaceum ATCC 12472 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Chromobacterium;species:Chromobacterium violaceum; 1458.0624 1467.9551 1761.5314 1343.944333 1478.367208 1512.5144 1291.3985 1431.616535 1536.518 1478.1811 1755.1655 1391.5538 212539588 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 1174.0768 2212.7447 1789.2582 1596.8575 2613.9553 1712.2297 1681.0898 1480.2653 1626.2929 1396.2365 89513113 cks soil_benifit Serratia proteamaculans superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Serratia; 1914.1964 1020.4748 2313.0722 2288.6236 2131.1466 809.0305 2603.1338 1647.9725 1243.9666 1424.8166 2807.3727 67087778 silC Metal Resistance Silver Azotobacter vinelandii AvOP superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Azotobacter;species:Azotobacter vinelandii; 7860.5938 7626.6997 6297.4438 6353.4462 9045.0067 7922.8542 5735.8823 5900.5787 8042.6586 6962.3818 6171.272 5843.4302 83026028 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 17589.9157 18870.8579 14084.0653 13172.0193 15538.8562 12984.2116 17313.0584 11766.4544 15734.8008 13764.3241 16731.2864 11144.9818 206676174 glnA Stress Nitrogen limitation Rhodobacterales bacterium HTCC2083 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 694.6781 1279.3016 960.4639 694.4234 595.9350827 1278.4934 1484.4769 1453.6505 1663.1303 1513.0651 1301.6069 115422927 nmoA Organic Remediation Aromatics Nitoaromatics Bordetella avium 197N superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella avium; 993.587 795.11 941.3008 1301.2101 1028.915 654.8312 773.3342 690.939902 569.9242 806.5527 1659.6916 126726584 tftH Organic Remediation Aromatics Chlorinated aromatics Rhodobacterales bacterium HTCC2150 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 1452.2866 2301.6623 1289.6233 1267.4594 783.9578 2096.0041 2085.3447 1764.1493 2054.3365 1675.2354 1619.8953 161332116 pilin virulence pilin Shewanella benthica KT99 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella benthica; 4246.1641 1556.5159 2017.7462 3775.0516 2097.3986 1745.8624 2943.5128 3933.4528 1498.9269 2887.3535 1290.36133 1991.6986 86611471 linA Organic Remediation Sphingomonas sp. BHC-A superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 997.9794 685.5658 963.0867 738.9858 426.4305585 563.2341 338.2073473 626.2934 640.7867 933.2838 657.9031 72121037 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 1347.2057 1544.385 1886.76 983.8932 1785.0024 1088.3242 1064.7583 2468.6785 1149.3889 1710.3092 1915.9647 254488753 NirB Nitrogen Assimilatory N reduction Roseobacter sp. GAI101 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 4602.7647 6327.8383 4135.1169 5914.3721 2983.3967 5774.1741 3985.6632 3869.6028 5121.4316 4807.5809 3437.8487 4311.9574 187924832 pstA Stress Phosphate limitation Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 14706.6462 19688.3183 13913.5171 11524.7002 24459.9244 8482.7279 17757.8164 10098.2678 10188.847 9242.9281 20628.6297 11600.7859 154301542 metalloprotease_fungi Fungi function carbon degradation Botryotinia fuckeliana B05.10 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Botryotinia;species:Botryotinia fuckeliana; 1248.2903 723.9046 403.021315 1318.4142 787.4274 315.7847507 539.9151 469.9847 348.9661599 667.4969 1303.7432 474.2741 151302180 AprA Sulphur adenylylsulfate reductase Desulfocaldus sp. Hobo superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;genus:Desulfocaldus; 7056.604027 7139.5709 5294.229259 5282.648002 7439.4469 6387.768837 8959.819688 4694.195969 6165.047469 5452.69893 3950.533346 5349.19872 133739206 ophC Organic Remediation Aromatics Aromatic carboxylic acid Herminiimonas arsenicoxydans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Herminiimonas; 1089.0369 644.4038 612.2723 801.2641 680.4944638 518.3401 916.6432 580.5451 629.6649 705.4994 116191613 scytalone_dehydratase_Fungi soil_borne_pathogen fungi virulence Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 1506.8217 989.5486 961.8742 1190.2738 647.940998 1464.2355 2003.2064 1109.5502 1060.6357 1854.6244 925.3315395 1181.8334 171913564 sigma_24 Stress Sigma factors Verrucomicrobium spinosum DSM 4136 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobiaceae;genus:Verrucomicrobium;species:Verrucomicrobium spinosum; 1241.8427 1124.2757 1332.6311 1215.8197 1431.8241 1514.2643 945.41055 1433.5695 895.4596 1259.5867 1912.1662 1311.096 206986897 iron_permease_high_affinity Fungi function iron Debaryomyces hansenii CBS767 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Debaryomycetaceae;genus:Debaryomyces;species:Debaryomyces hansenii; 1058.6396 901.6122 948.8032 896.4208 1368.1011 1018.3587 730.8944 729.7666 810.0204 800.8689 1941.1159 1062.9662 261361475 NRPS Fungi function iron Verticillium albo-atrum VaMs.102 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Plectosphaerellaceae;genus:Verticilium;species:Verticillium albo-atrum; 530.3071 459.4711 649.9295 365.20286 636.4256 987.4787 514.5801 487.9403 648.8672 209523577 sigma_70 Stress Sigma factors Arthrospira maxima CS-328 superkingdom:Bacteria;phylum:Cyanobacteria;order:Oscillatoriales;genus:Arthrospira;species:Arthrospira maxima; 2146.4005 1235.875 962.9792 1223.9195 1607.598 1017.0276 2318.2248 1232.5297 863.8385 987.5496 1274.6734 2124.9848 40642966 Glucose_oxidase_fungi Fungi function carbon degradation Botryotinia fuckeliana superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Botryotinia; 1480.0914 919.0293408 1103.4452 852.4037 926.6109 751.0500514 115256231 chnC Organic Remediation Other Hydrocarbons Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1088.2847 840.5858 1549.8065 1508.1742 1285.2088 917.2397 696.4314 999.77 1066.9543 1369.6667 846.3933 66571688 gyrB other category gyrB Xanthomonas campestris pv. campestris str. 8004 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas campestris; 1304.9342 3576.2491 2165.0021 1193.4927 3030.8903 1825.3551 1748.9688 1647.4641 2503.6593 2150.2115 1129.0737 226946840 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Azotobacter;species:Azotobacter vinelandii; 2762.6072 1582.0414 2485.5803 1073.5773 1223.1507 1347.605 1395.5659 2050.7743 1295.6196 163741241 ChrA Metal Resistance Chromium Phaeobacter gallaeciensis 2.10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 1593.9839 2822.6416 2139.7761 1753.7763 5182.5322 2303.4179 3112.6986 1496.2212 2215.2666 1694.2742 1745.003 1837.2097 150273017 Al Metal Resistance Aluminum Bacteroides capillosus ATCC 29799 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;genus:Pseudoflavonifractor;species:Pseudoflavonifractor capillosus; 1223.4942 2607.9423 2053.3243 1417.8308 16568.33005 1848.6869 2722.4012 2302.3295 2739.2008 2863.0442 2275.8209 110819439 CDH Carbon cycling Carbon degradation Cellulose Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 5820.8457 2909.5841 4618.7584 5144.3338 3652.801 3934.3413 3773.8884 3463.6376 3392.9158 3777.889 1933.7884 3510.565 50876750 MFS_antibiotic Antibiotic resistance transporter Desulfotalea psychrophila LSv54 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobulbaceae;genus:Desulfotalea;species:Desulfotalea psychrophila; 1133.3769 1092.18355 1367.2787 1175.7818 1727.3938 1418.3796 1409.1289 1116.1834 857.0006 920.57325 1673.5779 1151.6909 84382828 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Janibacter sp. HTCC2649 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Intrasporangiaceae;genus:Janibacter; 3872.2895 2105.6435 3117.4402 4044.6462 2864.8617 3500.7734 5494.629 9481.1435 2691.6498 3313.8002 2253.5559 6542.4479 149202116 sigma_70 Stress Sigma factors Roseovarius sp. TM1035 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 1245.859 2321.7955 1613.3958 1501.48845 2132.2652 1535.77145 1719.80005 1556.309387 1746.24545 1571.393 1875.7089 1925.6941 221728304 catechol_B Organic Remediation Aromatics Other aromatics Agrobacterium radiobacter K84 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 1674.0403 1072.0439 1619.0008 2257.3384 1423.5957 1406.7735 1308.4203 938.2748 1404.0463 1548.0607 1626.4897 1401.4136 78185934 narI Stress Oxygen limitation Chlorobium luteolum DSM 273 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Pelodictyon;species:Pelodictyon luteolum; 15584.70684 3852.6861 4594.6228 2640.0883 3174.7932 4030.1213 3255.2735 3704.1737 4612.1168 4409.4523 1995.4355 3778.7029 84381468 atzD Organic Remediation Herbicides related compound Janibacter sp. HTCC2649 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Intrasporangiaceae;genus:Janibacter; 675.1341 1810.4623 1965.8111 1155.8382 1415.8223 1074.5644 1549.1001 1115.4934 1522.4694 1320.7788 1042.9561 1570.7747 77164343 alkK Organic Remediation Others Nitrosococcus oceani ATCC 19707 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Chromatiaceae;genus:Nitrosococcus;species:Nitrosococcus oceani; 690.8365 1009.3888 1067.5326 681.5477 809.8172304 977.0195 956.7776 958.0532 875.1496 1190.9242 1315.9298 90436701 ara Carbon cycling Carbon degradation Hemicellulose Flavobacterium johnsoniae UW101 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Flavobacterium;species:Flavobacterium johnsoniae; 368.5574973 543.277282 547.701 28971822 phdCI Organic Remediation Aromatics Polycyclic aromatics Sphingomonas sp. P2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 1723.216 2815.3019 2097.8442 1882.2728 1815.5272 2498.1338 2098.914 1670.4743 2194.38 2521.764 1409.9559 3115.2931 258655295 amyA Carbon cycling Carbon degradation Starch Nakamurella multipartita DSM 44233 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nakamurellaceae;genus:Nakamurella;species:Nakamurella multipartita; 3849.1188 4634.1488 4881.894 4406.7403 7363.7888 3984.9085 4775.7325 3383.0594 4590.8808 3693.493 4589.5641 3635.0488 223585844 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1560.8061 1406.3831 3618.6599 1745.6263 1941.4754 1179.8417 1304.3943 3790.1866 1451.4458 1809.7911 2781.4004 3246.9177 158524010 dsrA Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 2552.2708 5360.4107 2755.3925 2372.3017 4093.3448 3076.1644 4854.2921 2226.6293 3592.8115 2336.4791 3220.1137 2353.1386 94312853 silC Metal Resistance Silver Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 4439.616 2377.3658 2862.5339 4074.9178 3490.697 2792.0398 2096.9411 2422.767 2689.4016 2807.8931 5287.9834 3619.751 58428287 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Xanthomonas oryzae pv. oryzae KACC10331 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas oryzae; 1030.8617 921.8297 627.8628849 585.705765 570.1112 481.7170482 730.3528 148253164 fnr Stress Oxygen stress Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2422.4477 5075.4107 3373.1316 3261.0519 3258.6512 5595.5062 4280.6775 4600.2288 4552.0432 5101.9843 2960.5759 4864.4373 212533941 nagG Organic Remediation Aromatics Aromatic carboxylic acid Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 3299.3886 904.3519 1845.4969 2263.0777 1564.4271 1401.3443 1575.6996 1072.0754 1594.5996 1597.2936 2258.5289 2364.4632 148238916 alkK Organic Remediation Others Synechococcus sp. WH 7803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 6344.8799 9044.4618 6317.5228 5439.1365 12760.2415 6824.7187 12709.4137 5936.6857 7932.2034 5818.0552 6874.5922 5328.1512 118732829 CopA Metal Resistance Copper Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 876.9678 1636.8195 1360.8232 1074.4065 1465.6669 1447.2302 1408.9225 769.166 1440.2745 1780.2447 1794.4472 125863051 cap virulence capsule Methanoculleus marisnigri JR1 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanomicrobiales;family:Methanomicrobiaceae;genus:Methanoculleus;species:Methanoculleus marisnigri; 1823.8575 2114.8373 1985.0978 1872.32155 2350.3188 2080.21025 1601.79435 1910.68965 1904.68845 2064.4644 2622.6098 2264.2789 91796691 pstC Stress Phosphate limitation Chromohalobacter salexigens DSM 3043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Halomonadaceae;genus:Chromohalobacter;species:Chromohalobacter salexigens; 7016.9112 4642.7373 7413.2475 7654.7659 3576.6974 4881.2837 3701.1213 5433.6321 5124.868 5493.5359 5870.1476 5145.9504 85706531 pimF Organic Remediation Aromatics Aromatic carboxylic acid Roseovarius sp. 217 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 985.353 1301.4864 1089.7888 697.3684211 1509.7326 1450.72 1103.7484 1397.1573 998.1083 87136607 xylanase Carbon cycling Carbon degradation Hemicellulose Novosphingobium aromaticivorans DSM 12444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium;species:Novosphingobium aromaticivorans; 2843.1069 4216.1547 3811.8606 2413.3943 5380.792 3076.5982 2936.1833 2168.1778 2465.0664 2456.9874 4067.005 19704.95695 163757370 Arylest Organic Remediation Aromatics Other aromatics Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 7889.6076 6266.7887 6280.8251 5969.9566 11410.2277 7976.9511 5907.0984 5255.5904 8288.9288 7127.4778 4593.2159 4362.877 118702810 tftH Organic Remediation Aromatics Chlorinated aromatics Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 1526.7015 1278.5625 1972.2521 768.4038 1074.1714 953.6129 1077.2608 1858.2479 973.921 967.9748 1590.0203 1122.0702 159046145 CopA Metal Resistance Copper Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 3411.5617 5194.0821 5015.5555 3381.9737 4086.5952 4966.1756 4957.7421 4796.318 6004.6073 5806.9781 3921.7042 4776.6189 145601221 tre_fun soil_benifit Magnaporthe oryzae 70-15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe;species:Magnaporthe oryzae; 762.7799 845.5577 684.2873 618.3079 715.4325 862.1631 545.91575 535.2749 213953437 SMR_antibiotics Antibiotic resistance transporter Capnocytophaga sputigena Capno superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Capnocytophaga;species:Capnocytophaga sputigena; 1173.6873 982.897 996.1729 1377.4642 1538.1682 1419.1573 953.0268 960.4256 1174.3409 1313.2415 2185.7104 1684.8218 158510988 sigma_70 Stress Sigma factors Desulfococcus oleovorans Hxd3 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfococcus;species:Desulfococcus oleovorans; 1508.6619 2820.246 1939.989 1231.6814 3380.7317 1258.2202 1063.70305 2351.0976 1122.668763 2174.9564 1044.9261 1844.2132 151563557 nmoA Organic Remediation Aromatics Nitoaromatics Ochrobactrum anthropi ATCC 49188 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum;species:Ochrobactrum anthropi; 1919.0857 1791.977 1898.6678 2126.1846 2059.4606 2258.5939 1515.8709 1405.4997 1751.8952 1806.3295 2930.5452 2451.8147 91783061 pimF Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 531.5026 965.3123 990.3134 584.6094842 1217.2324 996.9807 891.4555 1118.5775 1029.9263 730.2037286 1065.9461 83572934 pstB Stress Phosphate limitation Moorella thermoacetica ATCC 39073 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Moorella;species:Moorella thermoacetica; 1638.35745 3023.7128 2644.69605 1873.5269 2668.0143 2721.68545 2620.02365 2279.6642 2833.27175 2849.851 2039.7449 3048.2655 468467 pheA Organic Remediation Aromatics Other aromatics Pseudomonas putida superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1766.8575 3498.1118 2346.0623 2240.3261 3418.6697 1939.9651 2495.371 1706.3635 2194.5315 2154.9349 2420.695 1523.9886 111025787 bphC Organic Remediation Aromatics Polycyclic aromatics Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 5221.5504 5143.0482 4205.2845 4229.33 5635.5513 3893.6302 3276.6196 3895.2638 5159.1508 3679.9593 7323.3478 4168.5231 302192867 CysJ Sulphur sulfite reductase Brevundimonas subvibrioides ATCC 15264 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Brevundimonas;species:Brevundimonas subvibrioides; 5410.3816 6495.4538 5943.4364 6831.6542 5827.2512 7357.0279 8014.0186 8140.3169 6460.5816 6271.2791 7546.0078 6130.9993 163735051 glnA Stress Nitrogen limitation Roseobacter litoralis Och 149 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter litoralis; 639.7571427 828.419 746.5299 889.5995 821.1401 894.7007 533.5471767 747.1628 929.6069 572.637014 238725435 nplT Carbon cycling Carbon degradation Starch Yersinia intermedia ATCC 29909 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia intermedia; 2310.1402 3047.032889 2283.2954 2491.4976 2539.9331 2162.5895 1722.2203 1620.1085 1683.3645 1798.0552 4221.6033 2078.9128 187727497 CopA Metal Resistance Copper Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 2176.7172 2815.8244 2450.8338 2057.6011 3412.1855 2331.2815 2050.9799 1594.5079 1792.1772 2125.2545 3325.4616 2385.3364 158523550 dsrA Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 5779.7429 9848.2877 8442.4686 9291.8667 16743.3744 8096.2574 9149.1468 7193.7265 8064.2208 5859.7731 19166.3722 8371.9675 116651838 pobA Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia cenocepacia HI2424 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia cenocepacia; 3755.9121 7668.954 4468.1729 2959.8023 6675.6525 4385.8118 7385.1061 3420.3043 4788.3652 3489.2252 4715.357 3821.4242 241959040 ferric_reductase_transporter Fungi function iron Candida dubliniensis CD36 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;genus:Candida;species:Candida dubliniensis; 2207.0876 1987.8004 1973.3281 2403.039 2612.3775 1952.334 1499.0326 1714.7276 1631.7714 1949.2936 3628.5079 2245.9531 206568323 merP Metal Resistance Mercury Klebsiella pneumoniae 342 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella pneumoniae; 1503.5039 1278.9575 1654.2154 1128.1829 1108.4503 1295.753 1257.0337 2233.323 1195.0294 1148.5252 1118.032866 1855.309 119956543 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 2252.744 3961.9153 2768.2744 3431.2711 3275.0133 4118.4233 3125.4076 2550.7334 4073.7379 3532.6291 2363.1321 3996.8138 108781097 TerZ Metal Resistance Tellurium Yersinia pestis Antiqua superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia pestis; 1190.6791 1605.8296 1876.0298 1114.4032 2553.3755 1503.1368 1386.7964 1012.3771 1081.7901 1439.4558 1455.1222 963.0496 2462967 aclB Carbon cycling Carbon fixation Bacillus subtilis superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 2098.595 525.2621787 1199.9147 2355.851 1123.46428 770.4974425 1209.6502 1175.9301 1411.6065 1538.4464 2738.9249 161385023 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Phaeobacter gallaeciensis 2.10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 3421.4076 2507.8878 2658.1524 3832.8003 2145.1767 3361.0219 3193.1049 3817.5907 2418.7735 3460.4492 3030.007 3025.3188 49477914 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bacillus thuringiensis serovar konkukian str. 97-27 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus thuringiensis; 1366.0512 4111.9844 2464.0066 2027.535 4242.9924 3261.4878 3005.6585 1562.6132 3738.6213 3172.9466 816.8844897 3159.2641 229362307 cytochrome Energy process Energy process Pseudomonas fluorescens SBW25 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 1592.1571 720.7101108 1332.31715 1193.6734 797.1253 1225.8118 1064.0866 857.38505 1222.54195 1581.947915 1372.3011 160701294 ChrA Metal Resistance Chromium Phaeosphaeria nodorum SN15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Phaeosphaeriaceae;genus:Phaeosphaeria;species:Phaeosphaeria nodorum; 2042.0047 2692.6803 1303.316467 2168.0031 1724.256 2941.2138 2935.5295 1077.38915 2351.4426 2116.1539 3324.5727 2267.0597 47458802 fcbA Organic Remediation Aromatics Chlorinated aromatics Alcaligenes sp. AL3007 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Alcaligenes; 1866.1356 853.9678 856.9427 1225.8189 591.1429512 1135.0823 1043.243 1128.9217 1272.4281 1002.5301 255324170 cat_bac soil_benifit Corynebacterium tuberculostearicum SK141 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium tuberculostearicum; 478.5014843 905.1802 1064.1399 766.5668 654.7443 802.8214 625.444 163663866 SmtA Metal Resistance Miscellaneous Methylobacterium extorquens PA1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 4274.4391 3520.0035 4620.9975 4568.782 2368.5958 3853.0538 2767.4562 3362.9906 3113.4462 2941.7565 3801.0286 2781.7893 262316834 SMR_antibiotics Antibiotic resistance transporter Acinetobacter johnsonii SH046 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter;species:Acinetobacter johnsonii; 556.637608 701.3885 519.6574486 439.2789634 482.979869 801.6427 621.6804 440.2930076 720.8581588 66043921 CopA Metal Resistance Copper Pseudomonas syringae pv. syringae B728a superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae; 705.5314 2175.7786 1977.9662 963.1004 1405.7168 1138.4278 1745.241 2846.9612 1106.2645 2318.8137 1993.374 89343846 proO Organic Remediation Aromatics Other aromatics Rhodoferax ferrireducens DSM 15236 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Albidiferax;species:Albidiferax ferrireducens; 3830.7434 2334.1813 3065.9122 1510.9055 1401.0338 2869.0198 2998.0422 3206.6276 2671.7767 2896.8227 3033.3385 114327573 sir Sulphur sulfite reductase Granulibacter bethesdensis CGDNIH1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Granulibacter;species:Granulibacter bethesdensis; 3571.5135 1676.5635 1617.954 3514.0178 2656.2499 1639.2889 2954.9027 1475.5471 1952.0472 2036.4366 1845.3058 1858.5635 119775302 pimF Organic Remediation Aromatics Aromatic carboxylic acid Shewanella amazonensis SB2B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella amazonensis; 483.2699773 543.6622176 823.3326 516.5255 478.7169 403.0705428 145234699 ara_fungi Carbon cycling Carbon degradation Hemicellulose superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 879.9767 648.1373 714.6136 624.8672835 439.7864258 358.7323071 683.774133 713.4275 452.297 756.5587161 915.9065 89085923 rubisco Carbon cycling Carbon fixation Bacillus sp. NRRL B-14911 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 562.8165003 526.650964 488.3434238 429.0793971 487.3932 151302338 AprA Sulphur adenylylsulfate reductase Desulforhabdus sp. DDT superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Syntrophobacterales;family:Syntrophobacteraceae;genus:Desulforhabdus; 2716.07318 2333.3084 2752.7172 2863.004411 2148.9022 2758.1489 2098.09965 2159.8864 2887.649 2875.23235 2771.1179 3725.6823 222453764 pcc Carbon cycling Carbon fixation Halorubrum lacusprofundi ATCC 49239 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halorubrum;species:Halorubrum lacusprofundi; 3537.1403 2866.6799 4233.7528 4049.0431 3018.9458 3921.4639 3804.6057 3898.181 3908.952 3393.4617 3716.7984 3206.627 254398851 endochitinase Carbon cycling Carbon degradation Chitin Streptomyces pristinaespiralis ATCC 25486 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces pristinaespiralis; 2384.1119 2620.7231 2716.5139 2514.3588 4765.8585 3059.8172 1986.5058 3783.142 3101.9487 2871.7987 3439.3863 3560.7156 158520503 pilin virulence pilin Desulfococcus oleovorans Hxd3 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfococcus;species:Desulfococcus oleovorans; 4110.84715 3935.605337 5220.5768 3768.3877 4803.076 5169.431067 3768.553142 4476.8741 4141.528336 4337.461197 4952.9483 5344.06015 150395239 hrcA Stress Heat shock Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 1463.6771 1147.5945 1660.9181 640.5911843 1664.2011 1213.6877 1301.797494 1636.2795 1531.8024 1340.684693 222106272 nmoA Organic Remediation Aromatics Nitoaromatics Agrobacterium vitis S4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium vitis; 6785.4324 7459.8486 7459.1923 6283.2875 6661.6793 9272.7788 7307.0397 8415.5076 9031.0709 8005.0602 6850.4956 9043.2871 88786009 obgE Stress Radiation stress Robiginitalea biformata HTCC2501 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Robiginitalea;species:Robiginitalea biformata; 740.3614 901.5868 663.0005 685.5337 963.6184 791.4269 680.5171 726.5791 562.9901 1314.0978 1053.9303 114561460 cytochrome Energy process Energy process Shewanella frigidimarina NCIMB 400 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella frigidimarina; 1775.9512 4702.1431 3092.3886 2873.0284 1748.8465 3027.5116 3903.9493 2943.9649 3043.6341 3260.4581 1372.0691 1422.7125 270513544 B_lactamase_C Antibiotic resistance Beta-lactamases Streptosporangium roseum DSM 43021 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptosporangiaceae;genus:Streptosporangium;species:Streptosporangium roseum; 1468.6874 1988.6287 2308.6086 1358.2603 938.7987259 2095.6601 1552.6903 1900.516 2119.7336 2019.7204 920.5506439 2355.084 117647806 cellobiase Carbon cycling Carbon degradation Cellulose Acidothermus cellulolyticus 11B superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Acidothermaceae;genus:Acidothermus;species:Acidothermus cellulolyticus; 1059.0829 2182.0989 1506.0145 1904.6956 1261.9277 2052.7804 1210.972448 905.52665 1858.448 2774.3267 2466.7143 50541877 nirK Nitrogen Denitrification nitrifying uncultured bacterium superkingdom:Bacteria; 1103.321826 7857.503855 1444.4834 1342.2342 1578.3055 1658.9215 1108.2993 1230.9682 1258.4462 1257.3869 2168.2205 1739.8474 252127101 narI Stress Oxygen limitation Corynebacterium matruchotii ATCC 14266 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium matruchotii; 2487.5406 4147.814009 3512.1436 2938.982 5890.2916 2522.5275 3479.8262 929.8986 2623.4919 2133.5735 4394.5564 2331.2859 28542617 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 4471.4103 7281.5421 4064.1497 3768.9699 10125.4537 4974.9 5465.6896 5055.8094 6589.4072 5923.1315 2297.3047 4244.8063 197210183 CODH Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 3136.4146 3042.3743 5480.3101 1493.9069 2101.3991 1643.5465 3400.4522 5010.7573 2438.9378 2516.8284 2218.1916 4669.8224 22449909 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 507.1393072 1523.1559 1368.2674 700.2449 1357.1635 1620.5711 1424.6366 1631.0957 1649.0166 1440.2213 304452 coat_Dianthovirus soil_borne_pathogen structural Carnation ringspot virus superkingdom:Viruses;family:Tombusviridae;genus:Dianthovirus; 2376.7375 2764.3445 3180.7596 1344.1929 2005.7862 2744.9275 2615.2922 2246.0809 3241.6427 2886.8064 830.5544878 2772.8221 91977176 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1703.8735 644.0979 899.32535 1370.77295 824.4744 771.66965 713.30475 1095.37005 848.01345 947.5682 1240.23415 1344.5617 158306900 sped_bac soil_benifit Acaryochloris marina MBIC11017 superkingdom:Bacteria;phylum:Cyanobacteria;genus:Acaryochloris;species:Acaryochloris marina; 2161.7536 2597.9139 1775.9255 1708.8895 2986.9611 1875.0249 1959.5966 2534.562 2063.0383 1940.2376 1288.743754 1851.0107 6978960 norB Nitrogen Denitrification Alcaligenes faecalis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Alcaligenes; 1759.1071 1004.2918 1183.9067 1478.2095 1247.5754 1156.1659 652.1627 1105.5316 985.5117 874.8802 1425.4278 1287.5587 116626822 sigma_24 Stress Sigma factors Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 9869.123941 2444.6975 2640.705 2250.8595 1310.8623 2903.524 2607.3433 1880.0114 2374.4376 2145.611 1833.7499 1386.5552 78696804 nhh Organic Remediation Aromatics Nitoaromatics Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2418.0284 2833.8041 2719.4218 1864.7536 5442.9035 2348.1222 2587.3966 3258.6275 3337.2455 3461.309 1333.1012 2137.1379 193161104 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 868.4249 398.4606955 881.2303 410.7714397 850.265 480.6754221 407.1757237 492.7419 1050.3049 78093590 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2606.182922 3123.04242 2515.56457 3219.41145 4424.8143 3326.889713 2442.5448 2213.127156 2665.216378 2521.5853 4673.457621 3121.407286 116668908 CadA Metal Resistance Cadmium Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 3962.9575 2963.5998 3689.3363 3374.3442 3423.02095 2180.386468 1931.729027 2917.1902 2197.798358 2289.947964 4886.1719 2760.700897 156936655 mgtB soil_borne_pathogen magnesium uptake Cronobacter sakazakii ATCC BAA-894 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Cronobacter;species:Cronobacter sakazakii; 1206.3143 680.2757496 952.1649365 1193.479 703.972361 503.4984286 967.5913 645.4074204 915.4814 920.5037009 149809702 fnr Stress Oxygen stress Roseobacter sp. AzwK-3b superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 6702.6626 4165.8981 5923.2556 6266.7957 6776.8395 6324.7449 4448.0052 6216.3186 5461.1029 5522.8143 7833.4862 7059.7455 253576656 Tet Antibiotic resistance other Paenibacillus sp. oral taxon 786 str. D14 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus;species:Paenibacillus sp. oral taxon 786; 691.2797 491.8371 607.7171739 941.0359472 729.8818 687.1928 679.378 1167.9801 651.3231073 158313257 tfdA Organic Remediation Aromatics Chlorinated aromatics Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 1832.6758 1156.8711 1374.4757 1882.3139 835.2339 1425.0381 1538.2836 1205.164 1353.0722 932.7835 209959077 alkK Organic Remediation Others Rhodospirillum centenum SW superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum centenum; 2373.0974 3626.5312 2274.6734 1833.1124 4628.8758 1662.6008 2822.8001 1950.4825 1640.7993 1800.0875 3018.7635 2355.3587 134100280 pimF Organic Remediation Aromatics Aromatic carboxylic acid Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 6055.5483 10158.964 6039.586 4773.4367 13148.9309 9092.2116 5396.2948 5915.8906 10576.0693 8684.9518 1461.656736 5848.7034 256825658 sod_nickel soil_benifit Kytococcus sedentarius DSM 20547 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Dermacoccaceae;genus:Kytococcus;species:Kytococcus sedentarius; 1394.3128 1770.8711 1602.6584 1408.8178 1661.6137 1306.0878 1238.0734 1341.3592 1310.3772 1730.889 1663.2954 1860.8431 108763778 AceA Carbon cycling Carbon degradation Others Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 4423.2824 1015.3523 1709.6254 2977.883 1173.3677 1318.9053 1747.0877 1090.9218 1992.073 2219.8455 4093.4561 1596.4679 56809523 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 1404.878 1334.685736 1609.720645 1404.04698 1759.33494 1481.525027 1155.10583 1376.747645 1299.873027 1278.32621 2430.713267 1932.17715 255955359 protease_serine_fungi Fungi function carbon degradation Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 1257.4779 628.7814 654.8605659 996.7415 699.5804262 611.3631 468.2321612 412.1265071 690.1536 1063.136652 540.9584 27414484 endolysin_glycosidase Bacteria phage LYSIS Pseudomonas phage PaP3 superkingdom:Viruses;order:Caudovirales;family:Podoviridae;genus:LUZ24-like viruses; 698.0805137 1639.0749 1721.2414 1079.5149 900.3326 1125.2616 1678.67 1268.9888 196186206 pstA Stress Phosphate limitation Brevundimonas sp. BAL3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Brevundimonas; 1765.0442 2058.6745 2199.3444 1836.8244 1951.0689 1859.9191 1402.8318 1492.2873 1821.3112 1925.6207 2796.0794 2142.5897 238787810 amyA Carbon cycling Carbon degradation Starch Yersinia frederiksenii ATCC 33641 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia frederiksenii; 1913.4442 1767.9913 1484.9904 2271.2551 1179.8329 2475.8938 2922.3617 2426.8219 1972.3746 2114.1662 2320.3683 1546.6332 167031208 tfdA Organic Remediation Aromatics Chlorinated aromatics Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1790.8342 1114.9991 1945.8194 1978.8403 656.1125436 1149.3309 1784.4921 2446.0193 1504.0641 1750.2628 850.3988084 1263.9391 229555994 SMR_antibiotics Antibiotic resistance transporter Listeria grayi DSM 20601 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Listeriaceae;genus:Listeria;species:Listeria grayi; 1737.4811 601.8765 1211.4091 924.8651 596.1651 474.0753684 745.3828 1669.8301 196195183 pstB Stress Phosphate limitation Alcanivorax sp. DG881 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax; 4184.876489 4441.326758 4162.777342 3780.038627 6129.152131 4094.366008 5248.726801 3521.19945 4173.988002 3563.39192 5301.724966 4013.9998 255264690 glnA Stress Nitrogen limitation Thalassiobium sp. R2A62 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Thalassobium; 1609.3773 2434.4397 1761.4878 1473.1962 4317.9774 1976.3538 2123.6209 2115.2943 2568.4507 3019.274 1465.2846 1843.2657 15828116 AceB Carbon cycling Carbon degradation Others Mycobacterium leprae TN superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium leprae; 1229.9552 984.0438 693.6207 830.974 665.4452454 539.9279668 801.085 626.7477 483.1833307 1662.1182 594.6910919 119396542 nitA Organic Remediation Aromatics Other aromatics Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 7445.0254 6236.9201 9057.896 5778.3557 8243.8715 5814.9599 13163.9532 6737.6749 6819.4512 9493.298 8924.1864 171912865 ppx Phosphorus Phosphorus utilization Verrucomicrobium spinosum DSM 4136 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobiaceae;genus:Verrucomicrobium;species:Verrucomicrobium spinosum; 1085.3207 586.8329 1187.10535 938.6366 1299.07895 721.5362 1193.6435 825.95925 657.332 665.60415 1400.6927 163739656 CODH Carbon cycling Carbon fixation Phaeobacter gallaeciensis BS107 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 660.416135 520.3973 1023.4517 367.1850428 503.3165 900.177782 602.6029 332160374 sir Sulphur sulfite reductase Yersinia enterocolitica subsp. palearctica 105.5R(r) superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia enterocolitica; 2112.0676 1989.7882 2057.4244 2065.6963 1075.2521 1248.1321 1372.3898 1976.2041 1630.1522 1991.5474 1665.2173 2068.9431 227272193 xylA Carbon cycling Carbon degradation Hemicellulose Kribbella flavida DSM 17836 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Kribbella;species:Kribbella flavida; 2696.2919 4677.4607 2630.1929 2563.889 3879.7846 3519.9773 3290.6018 2049.8464 3207.1852 3807.3015 1928.0705 3274.3137 217505206 exaA Organic Remediation Chlorinated solvents Methylocella silvestris BL2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Methylocella;species:Methylocella silvestris; 553.6256 571.4399 508.533 447.9905761 892.577 957.8605 614.0529 718.086 740.2899 736.9745 908.5734 193225272 pnbA Organic Remediation Aromatics Nitoaromatics Cupriavidus taiwanensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus; 2093.4235 687.6902 827.7765 1817.7163 1055.8376 756.16 1002.0391 1030.5215 563.8551 1035.1187 2064.7465 816.704 116333937 hrcA Stress Heat shock Lactobacillus brevis ATCC 367 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus brevis; 384.3002404 710.818 634.2118 553.4293 401.6349 770.5650586 563.9464 145216424 ureC Nitrogen Ammonification Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 2972.1241 3104.6726 2425.14255 2961.5487 3199.7629 2826.1925 2278.8991 2695.63355 2756.63925 2569.3163 2866.38745 2683.43135 229737963 SMR_antibiotics Antibiotic resistance transporter Spirosoma linguale DSM 74 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Spirosoma;species:Spirosoma linguale; 2198.5984 2022.9571 2383.6614 2117.8976 2843.5322 2335.9927 1527.4902 2330.2177 1925.2663 1925.8999 3766.8656 2275.2991 119813626 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1052.4205 933.4941 858.5275 846.7399 1479.0334 860.7045 537.0361 892.2471706 1348.0965 673.8394 1141.2955 225133279 AceB Carbon cycling Carbon degradation Others Roseobacter sp. GAI101 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 1722.4369 2163.9407 2221.866 2147.2651 1541.8842 6013.400736 2054.7651 1997.5802 2616.7472 2422.8962 1147.7514 1978.955 148253943 alkK Organic Remediation Others Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 929.6359 404.4242262 1269.4716 1085.9261 412.0919456 1063.8445 683.0121 347.4328338 1034.9522 39974471 pme_CDeg Fungi function carbon degradation Magnaporthe oryzae 70-15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe;species:Magnaporthe oryzae; 7037.2746 3865.212 3880.705 6878.6641 5112.78 4319.1516 4113.9463 4142.1063 4114.3577 4356.5791 9288.2961 4593.704 170110953 phenol_oxidase Carbon cycling Carbon degradation Lignin Laccaria bicolor S238N-H82 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Tricholomataceae;genus:Laccaria;species:Laccaria bicolor; 1084.1073 2031.9533 1443.1748 1018.1507 2545.147 1087.6063 1311.5747 1859.6036 1118.7522 1918.4965 1062.872381 1512.7555 218525536 fnr Stress Oxygen stress Methylobacterium chloromethanicum CM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium chloromethanicum; 612.5665 479.7954 819.3172235 825.1526 722.6603974 481.888068 926.8747 535.5948 678.8866 793.8671 52428920 amyA Carbon cycling Carbon degradation Starch Burkholderia mallei ATCC 23344 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia mallei; 5587.7685 5262.4587 5887.9537 4843.2941 6176.4858 4682.724 5868.9943 4237.3064 15068.66247 4814.7944 5361.4266 4891.0094 212714558 amyA Carbon cycling Carbon degradation Starch Bifidobacterium pseudocatenulatum DSM 20438 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium pseudocatenulatum; 2926.011 2289.9519 3266.2664 3136.4592 2329.7667 3619.4815 2856.4423 2336.8145 2725.2337 3490.0403 3308.4762 3278.6257 156857711 AprA Sulphur adenylylsulfate reductase uncultured bacterium superkingdom:Bacteria; 1151.26875 683.4597 961.8337259 1223.3944 566.2737 554.2940144 639.247 820.1869 1333.0051 778.0035979 227993692 hrcA Stress Heat shock Meiothermus ruber DSM 1279 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Meiothermus;species:Meiothermus ruber; 3435.14215 3087.83335 3026.7574 3096.757 4059.7864 2960.36535 2385.95645 4620.4429 2695.59295 2815.8324 5052.22995 3777.8034 68264231 alkK Organic Remediation Others Corynebacterium jeikeium K411 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium jeikeium; 1975.6089 1524.3154 1659.7259 1695.0139 2701.2598 1928.9872 1317.6195 1595.5368 1576.0778 1486.0199 2439.626177 1693.8989 254949189 phzF soil_benifit Dyadobacter fermentans DSM 18053 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Dyadobacter;species:Dyadobacter fermentans; 3046.0824 1856.2463 1428.8679 1768.2272 2211.9711 1342.5561 1438.8483 1314.1851 1511.2515 1546.5979 2360.0809 1446.8677 154316951 amyA_fungi Fungi function carbon degradation Botryotinia fuckeliana B05.10 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Botryotinia;species:Botryotinia fuckeliana; 760.4561 515.5383 638.2128006 648.1258 721.088 705.6676 482.5422679 597.2765236 620.0496 471.7937 630.3094369 664.4099916 266629513 fnr Stress Oxygen stress Caulobacter segnis ATCC 21756 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter;species:Caulobacter segnis; 2056.7534 3500.8896 2547.5214 2048.4101 4309.5024 3325.0071 2654.291 2012.6258 3592.8232 3089.8348 827.2390928 2729.936 194542117 akbF Organic Remediation Aromatics BTEX and related aromatics Mycobacterium tuberculosis C superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium tuberculosis; 1327.4199 1787.9079 1926.7726 1641.7168 2328.8566 1762.6584 1378.687 1241.16 1509.6556 1665.0293 2387.5651 1891.0405 238708857 narI Stress Oxygen limitation Yersinia rohdei ATCC 43380 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia rohdei; 1425.7712 1788.5578 1774.6315 1554.7924 26620.40554 2013.6349 1741.2035 1871.49 1711.7646 2053.9902 2128.9162 2046.1886 192764410 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 4945.9196 4494.31195 5514.3762 4107.2713 3390.4769 5389.4385 4069.5622 4436.2643 5548.97665 4859.44905 3414.17245 5510.0087 840829 pstB Stress Phosphate limitation Mycobacterium tuberculosis superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium tuberculosis; 3503.8282 4036.8585 4805.3581 4186.1965 3390.7423 4614.628 3339.4765 4252.3117 4214.2823 4248.1864 2702.046896 4247.5939 222081823 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Agrobacterium radiobacter K84 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 1166.574879 765.2244805 868.2159 163742452 pimF Organic Remediation Aromatics Aromatic carboxylic acid Phaeobacter gallaeciensis 2.10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 3497.4075 3240.4573 3711.698 3723.8365 3142.088 3734.2411 4515.863 10138.1029 3513.9599 3094.0445 4510.9556 3697.1602 60326762 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 5662.9759 2789.4091 5028.9027 5180.7874 4038.6086 3462.0815 3746.876 2716.7434 3575.3614 3666.5484 7878.0278 3719.5851 109452446 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 625.3442046 413.993909 504.5338739 466.0345189 1608.6578 466.8530491 471.1905666 756.8721 111151754 nmoA Organic Remediation Aromatics Nitoaromatics Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 5067.0789 5970.588 4033.864 4112.175 7382.7104 5648.1823 4445.1606 4380.1247 6215.7559 6534.9636 4661.8061 4422.3518 66851757 nmoA Organic Remediation Aromatics Nitoaromatics Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 2863.027 3106.138 2868.7859 3369.2898 3768.1698 3302.812 2161.5644 2530.2045 2522.9033 3010.5976 5295.8394 3486.1489 283812206 sigma_24 Stress Sigma factors Kribbella flavida DSM 17836 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Kribbella;species:Kribbella flavida; 6758.8096 5042.2419 5516.9496 7561.1433 2922.7641 4728.9838 3903.8002 4243.9395 5673.7775 5428.4131 4014.8716 3701.7193 163755352 amyA Carbon cycling Carbon degradation Starch Kordia algicida OT-1 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Kordia;species:Kordia algicida; 1282.0053 718.1165 1023.2347 436.9386685 740.5031 89274947 bphC Organic Remediation Aromatics Polycyclic aromatics Rhodococcus sp. R04 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 2712.3301 3247.746 2341.904 1954.8697 3265.7042 2624.9183 2609.4424 2441.7828 2752.1078 2296.2799 2665.0012 2279.5836 238868681 phoB Stress Phosphate limitation Edwardsiella ictaluri 93-146 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Edwardsiella;species:Edwardsiella ictaluri; 2811.9574 1720.8693 3293.557 1767.8437 1592.4872 2227.44 2090.254 4758.8432 2646.3005 2367.8121 1671.944071 2681.5569 145702225 Blue_copper_protein Bioleaching Sulphur Metallosphaera sedula DSM 5348 708.2488213 337.0409142 450.1273868 398.1932936 394.2317 369.538121 456.2051946 972.8283 451.3121215 196251310 mannanase Carbon cycling Carbon degradation Hemicellulose Clostridium thermocellum DSM 4150 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium thermocellum; 1884.82 1376.7312 1866.2884 1951.8699 1281.4181 1418.9629 1135.4149 1560.4989 1265.2958 1761.1724 1030.223 1759.6906 116198469 cutinase_fungi Fungi function carbon degradation Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 783.4925 1251.525925 897.074646 1318.1813 1445.7346 3094.6674 1301.6814 1374.4813 1142.7633 1102.296752 881.1499 91710987 acc soil_benifit Methylobacillus flagellatus KT superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Methylophilales;family:Methylophilaceae;genus:Methylobacillus;species:Methylobacillus flagellatus; 1336.3121 1136.9672 1756.4426 971.8942 1065.1657 1055.12125 1016.0442 1842.8755 1130.30795 1313.4257 1325.2692 1633.5865 335175 coat_Tombusvirus soil_borne_pathogen structural Tomato bushy stunt virus superkingdom:Viruses;family:Tombusviridae;genus:Tombusvirus; 1712.2351 3133.4963 2126.8868 1862.3657 2164.8377 2312.524304 2133.57115 1756.19075 4557.6347 2850.537106 1212.209302 2037.255737 148256025 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 4065.2579 5620.2187 4474.1487 4820.6521 5300.8397 4969.8548 4499.3803 3304.3817 4579.5114 4836.368 28049.17043 4011.6859 197290632 napA Nitrogen Dissimilatory N reduction Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 2508.7233 2351.9317 2114.7827 3255.7647 2383.6307 2440.5222 3303.3567 1924.9425 2775.7202 2358.8008 2264.2708 2721.7927 91802076 CadA Metal Resistance Cadmium Nitrobacter hamburgensis X14 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter hamburgensis; 2476.1634 1232.9824 1682.5093 2502.2365 998.3315638 1802.593401 1839.50242 1971.665 1964.3252 3256.6838 1643.5973 116490131 gyrB other category gyrB Oenococcus oeni PSU-1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Leuconostocaceae;genus:Oenococcus;species:Oenococcus oeni; 1698.4737 1127.4868 1276.1452 1984.0728 1262.7051 1300.7982 1024.1422 1172.6135 1311.8333 1338.433 1046.031136 1212.2368 77969006 TerD Metal Resistance Tellurium Burkholderia sp. 383 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1289.1244 1152.271 1786.4375 879.6961 772.713484 1098.3898 1111.7059 2522.2641 1125.462 909.6301 1284.1631 1681.993 4220435 nagL Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia sp. U2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 3756.5971 2763.3633 4660.5739 2033.9044 2062.1149 2347.7334 2829.9575 4320.0754 3104.8143 2796.012 3838.1706 3951.5382 238919957 ureC Nitrogen Ammonification Edwardsiella ictaluri 93-146 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Edwardsiella;species:Edwardsiella ictaluri; 17319.7653 19673.3967 21078.0522 15968.6978 19349.5333 21258.4339 14822.5967 22732.7922 19314.0879 16600.6469 18616.7853 17374.5107 147848410 clpC Stress Protein stress Synechococcus sp. WH 7803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 4083.24375 1751.06285 3038.89785 3206.6454 1614.03475 2136.8198 2126.25905 2981.8694 2770.47235 2290.32255 2648.37615 2114.63745 110668350 ArsA Metal Resistance Arsenic Haloquadratum walsbyi DSM 16790 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloquadratum;species:Haloquadratum walsbyi; 2036.8736 16923.30237 1137.3513 1708.5197 908.503 807.0413 869.5962 782.0813 528.8268 797.0835 601.4082 83025958 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 6803.4451 7863.8004 7779.3227 6420.523 9802.4212 8018.3651 6914.2876 7408.1779 8714.2431 7896.433 5440.6838 8295.0251 24984482 phdCI Organic Remediation Aromatics Polycyclic aromatics Pseudomonas putida KT2440 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1589.4169 587.0764683 1014.7689 1313.261924 976.947 1065.6355 810.2684 1183.2168 687.7066 1005.6951 2822.634298 1067.0447 150274182 ArsC Metal Resistance Arsenic Bacteroides capillosus ATCC 29799 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;genus:Pseudoflavonifractor;species:Pseudoflavonifractor capillosus; 906.989 1332.9477 1116.5889 1346.5626 1781.8174 1475.7289 659.8196453 1334.9914 1619.4367 1171.4243 14389189 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2599.1361 2281.0321 3220.467 2395.0259 4087.2208 2689.335 2458.6433 2931.6185 2086.3711 2520.9935 4902.6047 3677.9212 77019684 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Rhodococcus erythropolis PR4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus erythropolis; 3404.8187 2939.5928 2988.7221 4256.8483 2442.4811 3006.0344 2573.2653 2386.091 2221.6618 3020.4018 3661.9262 2914.9656 87135187 vanA Carbon cycling Carbon degradation Others Novosphingobium aromaticivorans DSM 12444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium;species:Novosphingobium aromaticivorans; 4129.1016 4182.7183 4661.9407 4297.4478 5875.9962 4866.9406 3343.0208 4485.3108 3893.8317 4146.2814 7020.3976 5132.7262 134100396 cat_bac soil_benifit Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 2415.4091 1280.9326 1437.5044 1750.1875 2256.3175 1420.5183 1457.3612 1957.3698 1866.2411 1829.6898 1782.7217 1613.9217 119637775 scaffold Bacteria phage STRUCTURAL Yersinia phage Berlin superkingdom:Viruses;order:Caudovirales;family:Podoviridae;genus:T7-like viruses; 672.0088 836.0495 1080.9813 574.6056 681.0448 543.3124 561.5486 643.6342 719.218 40738974 phenol_oxidase Carbon cycling Carbon degradation Lignin Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 1382.264 2209.1513 1444.7305 1010.891 2341.7302 1934.2668 1340.6402 16674.93797 1789.2417 1431.0922 1099.2217 2098.3715 56679727 phdCI Organic Remediation Aromatics Polycyclic aromatics Silicibacter pomeroyi DSS-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria pomeroyi; 1304.404476 1061.3402 1507.3852 862.2077 1010.4297 42523160 pstA Stress Phosphate limitation Bdellovibrio bacteriovorus HD100 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Bdellovibrionales;family:Bdellovibrionaceae;genus:Bdellovibrio;species:Bdellovibrio bacteriovorus; 1813.9646 2461.7088 3583.2465 1432.1721 2013.1235 2045.9753 1938.6405 3075.1389 2216.5363 2337.6181 1912.5506 3367.0345 95110681 nagK Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae; 4217.6608 6266.2407 8154.0779 3492.9236 3221.2251 6480.9185 5311.7477 7214.8364 6305.3246 6969.7182 2407.8178 7125.084 88799189 amyA Carbon cycling Carbon degradation Starch Reinekea sp. MED297 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;genus:Reinekea;species:Reinekea blandensis; 759.7979 592.8616028 613.5797058 817.63 482.2171039 544.8358 525.9262 598.6222 783.8748 88787339 nitA Organic Remediation Aromatics Other aromatics Synechococcus sp. WH 7805 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 5304.4679 3543.2331 3758.1517 5029.1832 3534.3608 4658.2555 4766.3957 7967.2258 4349.8992 4381.4133 4339.8044 5099.8097 21229834 PobA Organic Remediation Aromatics Aromatic carboxylic acid Xanthomonas campestris pv. campestris str. ATCC 33913 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas campestris; 703.4225 1625.0708 1282.1209 829.2071 2162.9986 1716.8921 1774.8686 970.7021 1434.5083 940.952 1326.014 1000.1544 119960391 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria; 1479.7019 2200.2443 2379.445 1909.0925 2262.7068 2262.4526 1785.1803 1955.6026 1783.988 1610.0457 2429.8244 2391.31 209871801 ChrA Metal Resistance Chromium Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 606.2802 1164.9371 606.1948 787.1345 1077.9032 606.9566 1089.6765 1005.5723 854.2894 39942074 tfdA Organic Remediation Aromatics Chlorinated aromatics Magnaporthe grisea 70-15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe;species:Magnaporthe oryzae; 1780.6122 1607.0019 1494.9479 949.8159 669.8622 730.4394 1007.7728 794.3701 1842.038247 198267318 atzB Organic Remediation Herbicides related compound Octadecabacter antarcticus 238 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Octadecabacter;species:Octadecabacter antarcticus; 3505.35275 2271.0631 2852.31265 3397.23955 2608.11165 2797.4839 2763.4206 2310.56035 2719.5257 3200.9353 4053.0067 2977.77055 139003600 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 5810.27214 1722.0799 1668.6241 1287.3482 761.0596466 1718.0886 1667.8743 1898.2889 2195.743 1787.8974 1922.4876 78698973 nmoA Organic Remediation Aromatics Nitoaromatics Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 565.5029753 604.9923 502.3001607 163855735 nagG Organic Remediation Aromatics Aromatic carboxylic acid Bordetella petrii DSM 12804 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella petrii; 1260.6614 1781.1799 1684.981 1169.4673 2053.4694 1470.4125 1390.1572 1491.5732 1511.2515 1433.2696 1534.3553 1860.0466 117927966 obgE Stress Radiation stress Acidothermus cellulolyticus 11B superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Acidothermaceae;genus:Acidothermus;species:Acidothermus cellulolyticus; 5335.93305 5695.7884 6553.48415 5455.47075 8734.548005 5182.2939 6010.202794 5307.66905 4754.8104 4604.08905 6107.17435 5349.045 2473 cutinase_fungi Fungi function carbon degradation Ascochyta rabiei superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Didymellaceae;genus:Didymella;species:Didymella rabiei; 1952.6531 2367.6687 1935.6563 1953.9519 2033.031 1593.398 3642.2561 2291.7382 2491.9288 1782.2212 1804.7522 2243.1379 114569303 pimF Organic Remediation Aromatics Aromatic carboxylic acid Maricaulis maris MCS10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Maricaulis;species:Maricaulis maris; 1567.3342 3314.8101 2751.8303 1750.6396 4560.5457 2212.8277 2628.2077 2029.6686 2420.6257 3014.4724 2172.689 1974.849 67088759 ArsC Metal Resistance Arsenic Azotobacter vinelandii AvOP superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Azotobacter;species:Azotobacter vinelandii; 3487.1587 3799.0782 3962.4751 3993.5134 3917.672 3311.5764 2576.0296 1939.8791 2319.8391 3440.0146 5529.6229 4387.4579 45386169 narG Nitrogen Denitrification unidentified bacterium superkingdom:Bacteria; 1452.797 1908.873 1318.5132 1498.9201 2966.4469 2300.2771 1376.0488 1573.3133 2625.2858 1810.8631 2541.8714 33238827 sped_bac soil_benifit Prochlorococcus marinus subsp. marinus str. CCMP1375 superkingdom:Bacteria;phylum:Cyanobacteria;order:Prochlorales;family:Prochlorococcaceae;genus:Prochlorococcus;species:Prochlorococcus marinus; 788.8788 935.482 842.2433 817.934 1278.1381 809.2698 780.5834 770.2312 814.0859 969.5158 1465.4287 946.8729 158138741 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 536.768 580.7835 682.2452 624.8256 591.1756224 302675873 aflatoxin_aflM Fungi function toxin Schizophyllum commune H4-8 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Schizophyllaceae;genus:Schizophyllum;species:Schizophyllum commune; 795.5412 1578.3566 924.5267512 1342.7143 878.8016 954.9079 1111.2691 1007.4583 1101.1124 1365.7266 1050.5247 34732940 scaffold Bacteria phage STRUCTURAL Aeromonas phage 44RR2.8t superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 2274.6924 2633.2618 2482.0501 1928.1732 1559.0616 1495.8232 1738.3589 4852.7965 1938.3947 2053.1527 4055.0167 2206.4726 158187218 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia sp. NCIMB 10467 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 4605.6661 4117.9988 3899.1992 4907.6314 2687.2298 4836.8037 4455.2658 5243.5224 3804.3446 4586.4963 3966.0776 3808.3785 119196897 per_fun soil_benifit Coccidioides immitis RS superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Coccidioides;species:Coccidioides immitis; 3990.3057 2094.7104 1838.8233 3987.4454 3234.876 1642.8734 2666.048 1863.2712 1568.3312 2274.3601 2127.8111 2386.3526 197772882 glx Carbon cycling Carbon degradation Lignin Streptomyces pristinaespiralis ATCC 25486 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces pristinaespiralis; 2571.2775 7454.7516 4541.2193 5468.9012 3397.6246 8129.3407 5766.7602 4346.2327 9253.1346 8002.5924 2930.7614 7937.1739 147677066 glnA Stress Nitrogen limitation Pelotomaculum thermopropionicum SI superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Pelotomaculum;species:Pelotomaculum thermopropionicum; 2408.5855 1648.4407 2288.8494 2918.5316 1277.7779 1303.6648 1521.801 1320.0435 1626.4594 1742.5356 1541.4186 1425.7199 118170987 bphC Organic Remediation Aromatics Polycyclic aromatics Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 1837.7129 2183.526 2289.4456 2448.912 3164.2896 2362.2111 2073.3583 1328.3713 2767.0534 2724.3904 1707.7889 2291.0638 24986363 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas putida KT2440 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 727.6544 703.5734 405.0111965 341.4699511 511.7617171 160917700 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1289.4334 992.8377 550.8233 621.2673243 503.1642 670.4783 1123.5586 506.8455528 148750447 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 4681.1556 3326.4823 4102.3013 4321.3773 1427.217 1855.8659 2076.6962 3641.2194 2947.6236 3038.6031 2491.3514 3305.39 160896409 alkH Organic Remediation Other Hydrocarbons Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 621.8213 657.8089 628.0589 912.1243 711.8744 600.5811 497.4856 774.0718 637.8723 227992600 proV Stress Osmotic stress Meiothermus ruber DSM 1279 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Meiothermus;species:Meiothermus ruber; 618.5842 1212.6453 1059.0707 739.6937 675.0910056 1229.9902 1075.9074 1270.4281 1246.6925 1003.1938 1183.8795 111073799 endochitinase Carbon cycling Carbon degradation Chitin uncultured bacterium superkingdom:Bacteria; 530.3071 1524.3154 785.7429 470.8791058 1220.3495 916.8803 1149.3627 518.1476 1129.1547 867.7783 849.9424 89046595 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Oceanicola granulosus HTCC2516 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola granulosus; 3222.6499 4029.4126 4426.7209 4062.0147 1615.0491 4074.9603 4860.486 3595.6468 4136.5373 3490.0291 3528.1091 1702.7151 116182296 CopA Metal Resistance Copper Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 3813.786989 2330.899499 3266.793161 4131.961757 2435.935841 4722.8966 2245.09073 2337.850269 2873.032792 3073.564553 5257.2079 3753.003941 14025036 nmoA Organic Remediation Aromatics Nitoaromatics Mesorhizobium loti MAFF303099 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium loti; 2501.8325 2412.6882 1880.5177 3034.0702 1613.6082 2021.4171 2246.1114 1652.1969 2130.4157 2039.8312 1782.6016 1666.8462 163760379 fnr Stress Oxygen stress Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 5142.5013 4917.9892 2771.3277 4867.6209 2313.2719 5716.9663 4537.4729 2671.9697 4020.4906 4359.9737 5419.6361 89350173 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 1123.752468 838.2817 730.8441653 1203.613402 889.8991 616.560758 553.241307 965.0269 1578.9866 257149365 ABC_antibiotic_transporter Antibiotic resistance transporter Lactobacillus rhamnosus GG superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus rhamnosus; 1309.5818 1056.6891 1133.4547 1195.7939 597.6603974 685.2773 15955.50445 743.0158 581.3142 804.4879 1197.8728 126736867 sped_bac soil_benifit Roseobacter sp. SK209-2-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 807.0057 1104.04045 1317.563367 1006.060367 1791.278 1233.7367 1226.006767 1726.6442 1211.3496 1085.736233 1070.4883 1173.456633 187477137 CopA Metal Resistance Copper Bordetella avium 197N superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella avium; 2668.5676 1598.4261 2396.8342 2803.2807 1076.255119 2511.4898 3588.0478 1823.6781 1926.5826 3260.7373 1867.2162 1417.096 269935729 amyA Carbon cycling Carbon degradation Starch Mobiluncus mulieris 28-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Mobiluncus;species:Mobiluncus mulieris; 1321.15375 3568.4761 1748.8239 1315.7911 2481.429167 2240.9156 2243.697093 973.60715 2447.8958 1303.319785 3416.8272 1051.6576 57116474 vanA Carbon cycling Carbon degradation Others Comamonas testosteroni superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas; 2814.3887 2968.442 2784.4278 4016.2924 4095.3607 3308.1215 2523.9204 2349.0035 3021.9904 3566.3853 3052.1337 2515.2719 119714389 alkB Organic Remediation Other Hydrocarbons Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 2571.1432 3611.049 3979.4136 2779.173 2157.4056 3334.4296 3066.1754 3583.8088 3589.3984 3666.3809 2965.3088 4220.5961 260864271 sped_bac soil_benifit Ammonifex degensii KC4 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Ammonifex;species:Ammonifex degensii; 1152.0881 2187.387 1490.8352 1191.2463 2303.9817 1646.1638 1655.0965 1004.3883 2079.4866 1743.5406 1295.29 162281279 fccAB Sulphur sulfide oxidation Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 1894.0882 1567.3725 1834.476 1582.434 2326.3161 1436.7459 1867.1925 1624.5023 1150.4606 1415.9281 2491.7838 2206.8433 34103929 inv virulence invasion Chromobacterium violaceum ATCC 12472 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Chromobacterium;species:Chromobacterium violaceum; 7640.3713 12674.8158 8292.0286 8056.3088 14755.9601 4976.1813 11796.4294 7877.9447 7744.6788 6348.4839 9272.0074 7545.6234 27377220 fnr Stress Oxygen stress Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 383.4540008 595.6317306 784.9765 405.1488147 349.8001206 462.2979635 88062453 dsrA Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 2295.8751 3668.2758 3658.9052 2451.4871 2591.1808 3223.9924 3032.8429 4377.5344 3639.9664 3295.5766 2287.6227 3571.9486 186883006 hydrogenase Energy process Energy process Desulfovibrio fructosovorans superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio fructosovorans; 13848.2418 5534.3721 12553.3482 12736.7805 11123.1993 7414.3105 9105.2961 9871.24 8233.5032 12486.6924 13684.6304 9456.5484 160917615 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 4046.2915 31085.64293 3064.2257 5083.7679 3222.6471 4075.0201 5553.6701 4155.2757 3639.3723 3425.1521 4056.9627 3496.2926 32308005 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 801.6261 995.1808 750.1090465 987.9203 1259.2131 840.7628 772.3827 689.4724 577.1549416 237861577 ferroxidase_high_affinity Fungi function iron Polyporus grammocephalus superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Polyporaceae;genus:Polyporus; 1954.6813 2638.9131 1360.80135 1955.0614 3289.68795 2263.58185 2531.70865 1633.6592 1944.20165 1947.27805 1669.782 1902.9396 94985388 AceA Carbon cycling Carbon degradation Others Deinococcus geothermalis DSM 11300 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus geothermalis; 1867.6266 981.8649 1725.3571 2316.183 1943.6368 1529.8338 1234.7585 2503.0304 1530.5537 1639.5363 2317.1009 1782.5962 77865326 ureC Nitrogen Ammonification Marinobacter aquaeolei VT8 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter hydrocarbonoclasticus; 1743.6868 2730.3855 2493.5654 2340.7015 2072.5806 3073.9359 2765.4375 2897.4602 3640.0014 3922.6956 1459.5667 2755.4919 270510418 sigma_24 Stress Sigma factors Streptosporangium roseum DSM 43021 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptosporangiaceae;genus:Streptosporangium;species:Streptosporangium roseum; 3043.9332 2374.7408 1054.741342 2785.9259 2159.4342 1794.4554 1476.9983 1480.3283 2284.5661 1613.6413 3232.4143 2012.0225 222421348 obgE Stress Radiation stress Staphylococcus carnosus subsp. carnosus TM300 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Staphylococcaceae;genus:Staphylococcus;species:Staphylococcus carnosus; 4013.4764 1843.4018 1872.2641 2485.2378 3697.5645 1890.2953 2485.518 2267.4813 2411.8307 1760.7704 1865.8949 1139.3043 27356082 pnbA Organic Remediation Aromatics Nitoaromatics Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 1666.169 2507.7604 3035.4956 3008.6476 1679.6063 3086.9629 3099.049 2188.5251 3137.443 2678.4739 1779.1901 1936.1238 224026540 ahpC Stress Oxygen stress Bacteroides coprophilus DSM 18228 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides coprophilus; 1115.6866 948.9126 1152.4869 1087.83 1520.3462 1273.7822 881.6476 709.3104 702.8036 809.7574 2102.9696 1142.3117 46850264 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1552.8273 596.7976 1318.8186 1310.0176 973.6101 8668.640932 758.1132 715.3504 973.5366 1136.9232 1815.1068 1274.719 299754434 p450aro Fungi function organic remediation Coprinopsis cinerea okayama7#130 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis;species:Coprinopsis cinerea; 2456.58585 3445.21105 2089.28775 1834.49585 3189.5532 2760.45215 3349.30075 2010.39255 2652.42785 2763.7465 2239.069 3200.0835 124515930 mer Metal Resistance Mercury Leptospirillum sp. Group II UBA superkingdom:Bacteria;phylum:Nitrospirae;class:Nitrospira;order:Nitrospirales;family:Nitrospiraceae;genus:Leptospirillum; 1768.768386 1770.0811 2054.82915 2187.3646 1081.8311 2034.28695 1454.71735 1667.17595 1895.4916 2089.2148 1923.8902 1715.59605 126735161 pcbC soil_benifit Roseobacter sp. CCS2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 668.9725577 707.1758 731.2428 716.77455 554.5239969 693.5194 648.0896 628.5000206 95111085 TerC Metal Resistance Tellurium Pseudomonas superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae; 1993.2858 2471.1383 2882.831 1538.0403 1887.9147 1243.2863 1303.8208 5282.6192 1715.0729 1929.4843 2471.1947 1987.1944 13591776 alkB Organic Remediation Other Hydrocarbons Nocardioides sp. CF8 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 1438.0483 588.7953 666.49 1229.7227 810.253299 804.753 1388.8152 1418.8507 764.4964 1072.9841 703.2241015 1005.5512 41398613 katE Stress Oxygen stress Mycobacterium avium subsp. paratuberculosis K-10 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium avium; 1933.1897 734.6211 877.9406205 1624.2388 1233.8107 946.6433 1036.7251 1334.0966 934.6874 1280.1999 1482.8946 1242.3381 89054243 ureC Nitrogen Ammonification Jannaschia sp. CCS1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Jannaschia; 1127.4466 1522.9137 710.8791 1119.17 2180.6689 762.5912 1338.13746 725.36065 655.8332 965.8197 1383.0724 680.5065 4218177 chitin_synthase Fungi function major biomolecule Glomus versiforme superkingdom:Eukaryota;kingdom:Fungi;phylum:Glomeromycota;class:Glomeromycetes;order:Glomerales;family:Glomeraceae;genus:Glomus; 970.7118 690.723 770.0257 1007.6721 973.7142 1471.3205 1532.3525 686.5767 1152.3776 517.4056934 213970185 pilin virulence pilin Pseudomonas syringae pv. tomato T1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 4294.3726 1698.0857 1926.6999 3025.7422 1732.5413 2149.2784 2120.7189 1605.8738 1780.1905 2762.2335 1912.3584 1866.3498 133948824 Catechol Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 4604.9542 7108.9696 8417.5625 7091.9346 3055.86 22314.37887 7058.8469 5653.5668 7667.9939 6599.0925 5722.4683 4274.5231 254467190 SMR_antibiotics Antibiotic resistance transporter Rhodobacterales bacterium Y4I superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales; 2093.0609 1251.0513 759.659 1958.2803 1996.5149 1207.122 2079.5523 977.8073 1114.314 1343.1787 1419.5417 1766.6117 211905607 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 3363.3398 1502.01595 1838.5325 3245.60115 2024.9732 1998.175 2211.68355 1941.91265 1851.12085 2452.0853 2314.19395 2187.467 84685154 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Rhodobacterales bacterium HTCC2654 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Maritimibacter;species:Maritimibacter alkaliphilus; 1563.4388 649.9085 892.3173 1109.6913 1067.0237 955.303 870.4641 1037.2912 1038.7925 1328.3924 958.8475 85669428 TerC Metal Resistance Tellurium Roseovarius sp. 217 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 800.9322068 900.6693 734.2586 1020.0547 981.0612 632.3818 827.1755 604.1485 798.2667 717.4444 1071.1129 918.2959 72121247 mauAB Organic Remediation Herbicides related compound Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 17670.5632 27158.0551 30187.9995 21531.9064 21295.9381 27318.617 25548.8309 26404.4296 33754.8782 30682.4554 17175.0689 33983.7039 237876257 sigma_38 Stress Sigma factors Burkholderia glumae BGR1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia glumae; 1697.9633 3463.5794 2175.2088 2588.5993 2175.1517 3879.5713 3527.29 3077.9349 2799.7054 4047.7821 1462.3055 3600.3197 229588264 type_III_secretion virulence secretion Pseudomonas fluorescens SBW25 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 1383.7684 951.9326 1383.1994 1281.8966 1623.505 1170.3295 925.5785 817.22 1095.1049 1065.0113 961.849 1648.4311 56419510 Al Metal Resistance Aluminum Geobacillus kaustophilus HTA426 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus;species:Geobacillus kaustophilus; 2790.3717 1935.4667 2612.2076 3075.382 2442.538 2456.8096 1891.6814 1648.6261 2536.8122 2525.9067 2864.4294 2855.326 118570137 sigma_24 Stress Sigma factors Mycobacterium ulcerans Agy99 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium ulcerans; 1915.2844 872.8396 926.9794 1982.84 1196.8776 846.6755 1380.396 1123.9543 745.4154 950.3095 1177.7822 1148.8345 169239956 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium abscessus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 4341.9364 3505.5407 2662.6451 2802.7328 3614.7871 2882.9292 2454.7549 2087.4423 2953.3315 3024.3212 4611.4746 2716.904 112462569 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 900.2108883 511.5511551 1040.7516 640.3599 575.9607819 498.1769468 643.946669 115379096 xylF Organic Remediation Aromatics BTEX and related aromatics Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 1608.7997 1832.8254 1859.1349 1876.7801 1365.4847 1656.7977 1073.9001 1256.2782 1496.469 1437.0997 2443.4703 1672.9846 251845783 ara Carbon cycling Carbon degradation Hemicellulose Paenibacillus sp. oral taxon 786 str. D14 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus;species:Paenibacillus sp. oral taxon 786; 2158.4896 2322.3434 1842.6762 2207.1507 2651.4911 1600.592 1941.6228 1448.0099 1965.3969 2349.6108 1767.8264 1198.8478 221535658 sigma_32 Stress Sigma factors Rhodobacteraceae bacterium KLH11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 3631.7842 2333.4295 2751.0306 2339.0167 3108.359 2435.1379 1679.184 2115.8874 2383.0229 2165.5431 3310.4702 2103.837 86356357 glnA Stress Nitrogen limitation Rhizobium etli CFN 42 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 1725.8084 883.7599 1274.5168 1422.5154 1385.5629 1016.2947 1273.0806 961.4303 930.8199 877.8616 952.4794 1083.8119 25026977 alkK Organic Remediation Others Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 1428.9681 2179.9964 1646.16055 2534.138 915.8008494 2288.7009 2578.576 1450.34 1306.7544 1281.0821 1431.6982 1228.87355 121554179 pimF Organic Remediation Aromatics Aromatic carboxylic acid Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 1552.2766 1118.6944 1314.9656 1730.7097 1042.2436 1457.2659 1493.3204 1512.6951 1215.5316 1209.5721 1123.3905 1368.5384 90424849 phzF soil_benifit Rhodopseudomonas palustris BisB18 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1978.0535 4493.6239 4440.4171 2888.1231 3384.4098 2766.8086 2473.2908 4090.3363 3189.1293 3491.224 2642.7785 4156.9879 116070689 sir Sulphur sulfite reductase Synechococcus sp. BL107 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 2915.9234 1516.2494 2107.9928 2554.7117 2501.9003 1720.1077 1723.5164 2486.8712 1210.3711 1783.7063 2969.0566 2740.6197 124389567 rubisco Carbon cycling Carbon fixation Thiorhodospira sibirica superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Thiorhodospira; 546.9528658 1059.4543 834.9736 818.0025 1059.0697 1157.1624 862.5344 941.4554 765.6723 219539549 Ni_Fe_hydrogenase Energy process Energy process Desulfitobacterium hafniense DCB-2 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium;species:Desulfitobacterium hafniense; 1998.2691 1056.1412 1727.4072 2201.8908 1628.2639 1509.6877 1739.0815 2052.3157 1313.6738 1704.2459 1742.4324 1308.94 162568589 aoxB Metal Resistance Arsenic uncultured bacterium superkingdom:Bacteria; 2063.595578 2308.25655 1849.69155 3018.875161 2512.47025 2796.0406 1983.264894 2145.5549 2165.294018 2369.59875 1884.7061 2119.13485 139003534 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 869.1502 815.7911 990.6624 1020.7122 1147.3173 719.5733 542.5164922 631.85 858.6888 1362.5073 837.124 218756597 cytochrome Energy process Energy process Desulfovibrio vulgaris str. 'Miyazaki F' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 4083.1229 1908.083 2293.6765 3938.8329 2868.7484 1712.2706 2256.6985 1619.9511 1808.5207 2407.6094 5396.1902 2008.7405 77383868 MFS_antibiotic Antibiotic resistance transporter Pseudomonas fluorescens Pf0-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 1917.4604 956.1196894 1300.2102 843.5434178 1561.0292 1742.2406 1026.2363 1446.6805 113529318 nagI Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 1965.2123 2600.4879 2634.4385 2076.216 1643.1092 2702.7059 1970.9522 2619.6551 3079.8506 2516.3147 2483.0389 3491.0788 134058158 phytase Phosphorus Phosphorus utilization Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus; 1123.4639 2538.32333 2183.0311 1473.1414 3410.5361 2746.5278 1585.419009 1642.5377 1744.438639 2103.9824 2588.7711 919.8476 60326839 phtA Organic Remediation Aromatics Aromatic carboxylic acid Comamonas testosteroni superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas; 555.2912 827.8838 664.4254 665.2614 1178.9229 809.3595 714.3314 916.6202 724.4474 949.2152 632.471651 873.5559 99030619 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 2703.9214 1406.4595 2203.1101 2091.7764 1367.8547 1400.432 1879.133 1533.6597 1749.1577 2177.3013 2718.504 1619.0714 157918322 sigma_70 Stress Sigma factors Salinispora arenicola CNS-205 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora arenicola; 1502.3084 412.66868 497.8626887 1019.1369 721.2763537 721.9849 1436.061 5245.2412 687.9512 1072.4146 894.873 242262673 ctsR Stress Protein stress Clostridium cellulovorans 743B superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium cellulovorans; 795.3577713 935.2653 756.8553898 896.051 855.094 992.5441 789.9546 751.058 762.0152 725.3949 1709.2064 1026.4656 146190990 tfdA Organic Remediation Aromatics Chlorinated aromatics Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2594.4482 2128.886 3810.1449 1617.1709 1718.3975 2047.4859 2112.2883 4181.2999 2453.3825 2091.6993 2442.4853 2881.5411 114763537 ureC Nitrogen Ammonification Roseovarius sp. HTCC2601 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pelagibaca;species:Pelagibaca bermudensis; 3218.87545 3898.0305 3416.65555 2718.28065 3588.7083 3521.8693 4119.2283 3142.15415 3669.8285 2938.8755 2902.8688 3101.0458 78184154 amyA Carbon cycling Carbon degradation Starch Synechococcus sp. CC9902 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 2337.4884 5559.7425 4426.1393 2856.4134 4955.6813 3468.408 3330.5068 4486.1218 3318.9334 3898.8664 3103.6424 3520.8231 127514154 phoA Stress Phosphate limitation Shewanella loihica PV-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella loihica; 8337.4001 6815.4321 6822.9299 8390.912 29741.03841 7210.0525 5961.3411 6414.9376 8740.1503 8146.6843 7180.1371 7334.0079 152066463 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Beggiatoa sp. PS superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Thiotrichales;family:Thiotrichaceae;genus:Beggiatoa; 684.3218 1018.1429 802.7708 1687.3987 546.782926 1905.6063 743.5534 849.6734 447.2945 709.4224486 832.9631 167668933 atzA Organic Remediation Herbicides related compound Anaerotruncus colihominis DSM 17241 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Anaerotruncus;species:Anaerotruncus colihominis; 2693.3771 1172.2641 1983.9273 2312.9641 1334.5617 1666.4595 1876.9307 1902.8643 1582.1352 2251.7481 1501.7539 2361.9365 161380355 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 1370.9137 869.5775 1733.223 2349.0022 839.8653 1565.6029 838.5953 971.8273 1293.2577 145254432 tre_fun soil_benifit Aspergillus niger CBS 513.88 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 662.2698027 574.3083961 1094.7069 1084.0906 981.4914 1120.6986 855.3 524.4219232 776.6598924 744.5223909 269926898 sigma_24 Stress Sigma factors Thermobaculum terrenum ATCC BAA-798 superkingdom:Bacteria;genus:Thermobaculum;species:Thermobaculum terrenum; 912.2142 834.3825 902.5967 950.6356 1473.3328 1126.6871 588.5718 660.0702 672.5785 881.6694 1266.9855 1181.7373 94314069 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 980.0473 1052.7135 711.5792841 707.79905 1003.2154 1220.5677 614.7239 1005.284 912.1758 730.1853 971.5069 914.0938 90415570 pstB Stress Phosphate limitation marine gamma proteobacterium HTCC2207 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 994.9571 817.728 752.4329 760.1549 354.9960661 786.7136 757.8059 133738727 czcC Metal Resistance "Cadmium,Cobalt,Zinc" Herminiimonas arsenicoxydans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Herminiimonas; 2848.3186 2492.8388 2919.6596 2624.4595 3609.6174 2938.3422 1875.6919 1919.0598 2204.0952 2620.6764 4046.512 2938.599 78061121 TerD Metal Resistance Tellurium Burkholderia sp. 383 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 639.3908 573.0029951 590.7511 616.8855535 1275.1625 531.4672 961.3193 56381713 ChrA Metal Resistance Chromium Geobacillus kaustophilus HTA426 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus;species:Geobacillus kaustophilus; 1574.2384 1075.3549 1204.3412 1284.3069 729.6046 1226.359792 707.598083 157913489 fnr Stress Oxygen stress Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 1536.7891 874.0266 957.7857 836.9477431 1374.42 1061.1574 654.3537772 1037.5418 771.7443 86749822 nhh Organic Remediation Aromatics Nitoaromatics Rhodopseudomonas palustris HaA2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1858.7747 2542.1653 1404.4125 2874.1106 2745.0374 2288.8505 3593.1291 7298.3801 1840.2873 2067.3676 2536.6618 3800.194 147850771 pstS Stress Phosphate limitation Synechococcus sp. RCC307 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 2283.2219 1261.1562 1379.7099 1266.4458 1726.9862 1433.7845 1509.654 1594.3143 1338.1366 1214.2956 1159.138958 1633.3667 111022350 TerC Metal Resistance Tellurium Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 2120.3687 2286.333 1203.3314 2487.2377 1634.1034 2540.7293 2025.126 1364.2847 2231.8081 2268.2632 1277.244 2428.3599 77378791 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2468.6548 1509.5213 1789.7671 2616.4053 1852.0433 2239.0759 1826.2782 1213.7922 2221.4755 2361.1123 2527.5084 2182.7843 157381244 protease_serine_fungi Fungi function carbon degradation Dactylellina haptotyla superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Orbiliomycetes;order:Orbiliales;family:Orbiliaceae;genus:Dactylellina; 4185.4367 4612.2443 5107.067 3458.2963 3325.7111 4596.2916 3503.5122 4625.8414 5289.2112 4498.0915 2605.6604 5762.3406 118467896 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 3100.709229 3259.846834 2905.282212 3577.637454 5245.383 3041.533307 2465.984951 3898.045149 4728.563108 3071.655091 5103.5225 3455.68586 78367424 ChrA Metal Resistance Chromium Shewanella sp. PV-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella loihica; 8115.9821 13525.8529 14009.5649 8763.3203 13343.1145 10336.0513 8504.2676 14064.0753 11947.5335 12401.403 11587.8831 13652.2752 66391976 UvsW Bacteria phage REPLICATION Aeromonas phage 31 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 2095.0623 1022.692 1585.0947 2136.581 907.2335 1045.8668 1239.4291 1201.1218 1411.7966 1228.7383 1745.9445 114539759 sigma_70 Stress Sigma factors Fulvimarina pelagi HTCC2506 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Fulvimarina;species:Fulvimarina pelagi; 1052.9578 754.5377 800.8943 20109.35841 515.8086806 630.3542 542.2347 430.9356 733.3269268 218768523 alkK Organic Remediation Others Neisseria meningitidis Z2491 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Neisseria;species:Neisseria meningitidis; 2386.0417 2558.2973 3371.096 2368.1559 3786.6364 2771.0861 1877.1142 2625.6467 2144.3479 2277.5202 3766.0488 2973.1771 194098784 CopA Metal Resistance Copper Neisseria gonorrhoeae NCCP11945 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Neisseria;species:Neisseria gonorrhoeae; 1480.3869 2465.6844 1905.2251 1415.6255 2911.1419 1929.5107 1572.2012 1796.504 1493.6732 1849.8005 1451.3263 1402.5672 190995000 TehB Metal Resistance Tellurium Geobacter sp. M21 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 7378.7236 7821.304 9560.6568 6412.3319 8806.0217 6066.1956 6638.8645 10398.7079 6531.0927 8245.418 11146.0226 9031.3125 251795830 pstC Stress Phosphate limitation Paenibacillus sp. JDR-2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 634.6259755 461.2434216 652.425828 821.7252 399.2103138 557.7195425 478.7057 689.1937344 700.1301 254980894 pstA Stress Phosphate limitation Nitrosomonas sp. AL212 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas; 1008.4566 873.0179 979.2198 1184.9592 535.5932428 1117.9526 1305.2087 983.8958 882.7564 1022.4895 1292.7879 1029.0061 83594120 atzC Organic Remediation Herbicides related compound Rhodospirillum rubrum ATCC 11170 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum rubrum; 2658.8292 2593.0335 3337.2772 2748.9152 3869.8498 2748.866 2254.565 2449.1059 2457.4829 2577.0267 5406.9052 3376.1803 170774339 fnr Stress Oxygen stress Leptothrix cholodnii SP-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Leptothrix;species:Leptothrix cholodnii; 7555.1031 11236.398 9228.2987 9550.517 9365.3849 7196.3226 7241.1318 7582.4794 16029.7984 6128.2145 9893.8122 10685.7264 119817918 Catechol Organic Remediation Aromatics Other aromatics Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 14943.8203 10544.9614 14665.7174 8362.8594 10265.9818 8015.1195 8553.8076 21815.724 9796.3012 9234.3411 19096.0762 12028.013 115421752 bphA Organic Remediation Aromatics Polycyclic aromatics Bordetella avium 197N superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella avium; 1644.0729 1430.470074 1645.96425 1941.907233 2506.825421 1939.4716 2061.6587 1396.0947 1427.6509 1383.671967 1631.06635 1781.9576 109392497 DNA_polymerase_type_I Bacteria phage REPLICATION Mycobacterium phage Che12 superkingdom:Viruses;order:Caudovirales;family:Siphoviridae; 1309.1251 1838.7125 1141.3932 1240.1054 2137.4791 846.0622 1852.7056 910.8586 995.6462 1022.2996 1213.9392 1713.7971 87301479 ALN Organic Remediation Others Synechococcus sp. WH 5701 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 696.5452 962.4452 781.9772 531.2311 13034.11762 661.9354 536.6002 1032.25845 558.0639525 618.5934 74038418 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 894.9671 1519.7536 2321.6214 1055.9696 1246.1913 1561.5411 1594.5452 2345.3117 1711.4617 1827.155 1335.4316 2286.3674 146340169 sox Sulphur Sulphur oxidation Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2190.9689 3011.4736 3866.0928 2166.9347 2512.2901 1785.4218 2913.3116 4435.0781 2263.2602 3272.7635 3525.8268 2933.573 134034476 mer Metal Resistance Mercury Rhizobiales bacterium Is-B040 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales; 4268.502 4896.8748 4363.983 5109.7658 7068.5889 4161.1833 6081.8015 4118.2609 3624.019 4012.5408 5174.1308 5264.2134 89100026 cat_bac soil_benifit Bacillus sp. NRRL B-14911 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 733.6721 563.5268 859.8943 883.463 541.7467 521.058 679.5218 493.6688217 466.6234897 903.253 551.3107483 163746718 sox Sulphur Sulphur oxidation Oceanibulbus indolifex HEL-45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 2133.21 3180.2997 2247.8844 2523.43335 3446.6729 2437.0822 2611.72495 2340.4519 2934.3554 2348.44395 1547.0043 1065.4632 153888450 CadA Metal Resistance Cadmium Ralstonia pickettii 12D superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 1123.6251 760.4502 748.1147 914.5152 607.1970272 885.6067 645.04545 917.401 663.9641214 838.5334 846.9563 91693269 pimF Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 932.9402 1911.5235 900.3286 1027.7253 1648.0184 1254.8085 1291.9132 1059.5523 1051.0644 819.6713435 997.9298 56809495 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 1660.863264 1665.734627 1791.536909 1603.119709 2026.345191 1658.495073 1452.470745 1859.811582 1395.697191 1585.719082 2393.486064 2155.124809 145246292 nagG Organic Remediation Aromatics Aromatic carboxylic acid Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 572.1788655 579.5519129 720.6074648 692.3644 62468094 bco Organic Remediation Aromatics Aromatic carboxylic acid uncultured bacterium superkingdom:Bacteria; 1144.5929 1134.1256 708.7647 1583.4246 1017.9848 853.9929 1003.6863 1151.1945 1148.849 895.7718241 78185796 sped_bac soil_benifit Synechococcus sp. CC9902 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 3141.5457 8522.9855 4962.2101 3653.9791 7163.8226 5980.0025 5136.7694 2613.4819 6390.3735 6616.769 2060.9746 3263.5338 256666696 B_lactamase_A Antibiotic resistance Beta-lactamases Streptomyces sp. AA4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 4146.4696 2902.1998 2943.0899 4323.08955 2338.1089 1935.619533 2156.502233 2215.094 2614.70275 2635.47195 3456.74005 2685.9787 85687636 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Erythrobacter sp. NAP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 7501.5888 4203.5141 4785.3082 7137.0269 4411.3151 3041.2265 3827.1217 3131.8232 3907.0998 3639.1459 9822.6273 3247.6592 110669493 glnA Stress Nitrogen limitation Haloquadratum walsbyi DSM 16790 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloquadratum;species:Haloquadratum walsbyi; 4609.6152 1789.1694 2050.082 3831.0059 1440.1284 2865.7444 4688.0885 4658.995 2520.0377 3626.3715 1986.8989 1828.7918 58001664 MFS_antibiotic Antibiotic resistance transporter Gluconobacter oxydans 621H superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconobacter;species:Gluconobacter oxydans; 858.0686 1883.8976 1515.1162 742.2278 2286.8802 1530.1479 1721.7959 1400.8638 1376.4849 1387.3532 1173.0584 145217169 chnB Organic Remediation Other Hydrocarbons Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 4547.9475 3990.8536 2622.2108 4319.8021 4560.1665 3294.0327 4610.9053 2546.7995 3680.3999 2935.4958 3411.3255 4023.5369 152989181 Catechol Organic Remediation Aromatics Other aromatics Pseudomonas aeruginosa PA7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 2426.5848 3770.02515 3485.68175 2791.06245 5663.01425 3083.754599 3586.75165 2367.1902 2962.8895 2916.36955 3472.1198 2438.5424 86157603 CopA Metal Resistance Copper Anaeromyxobacter dehalogenans 2CP-C superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter;species:Anaeromyxobacter dehalogenans; 1041.2851 1908.8857 1772.8431 1065.9551 2223.1762 1563.2163 1257.7908 1654.2546 1374.5046 1615.3609 1006.919085 1525.3893 1177721 bphD Organic Remediation Aromatics Polycyclic aromatics Rhodococcus sp. M5 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 1556.7898 1376.6802 1316.0997 1420.1731 1889.0144 1484.7705 1025.8169 1091.6601 1109.5612 1148.112 2360.0809 1557.88 310759562 phzF soil_benifit Achromobacter xylosoxidans A8 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Achromobacter;species:Achromobacter xylosoxidans; 1033.4944 339.5007454 530.3132 895.01 575.534658 843.8038 880.6611 858.9555 464.0223659 549.97 679.7760907 501.7526 211905493 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1728.6561 1021.1374 1112.1705 1822.3526 944.2054 2082.8557 925.4564 800.2237 1015.2536 1038.3193 1337.4346 146281197 katA Stress Oxygen stress Pseudomonas stutzeri A1501 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas stutzeri; 2879.580067 2182.060633 2640.788575 2924.887267 2713.495033 2382.9891 2258.654125 2351.14295 2419.16955 2677.896075 2593.7082 2298.03985 26986215 sox Sulphur Sulphur oxidation alpha proteobacterium HY-103 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 1094.5845 1195.8378 1365.7811 824.6869 1282.4269 1086.3108 1373.6655 1612.9001 1380.0615 1190.5672 99038847 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 1504.5113 576.9319 1084.3258 1340.4398 1012.515 832.5941 657.4084667 1290.6302 781.7252 801.85155 620.0958515 224025190 cda Carbon cycling Carbon degradation Starch Bacteroides coprophilus DSM 18228 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides coprophilus; 709.3731 713.2427472 565.5379737 452.937533 605.4799 359.9860213 403.4772316 577.1843 110284142 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 6898.0891 5357.2123 8920.2943 7144.944 1808.234 2563.2984 3886.7325 7568.0269 4935.0369 5226.0547 3645.2531 5174.7197 104780183 sid_bac soil_benifit Pseudomonas entomophila L48 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas entomophila; 1613.7025 1642.8467 932.3881 1794.184 1391.7437 995.3858 1396.5117 1093.04 736.8185 1219.0748 1855.7565 1219.872 119496895 iro virulence Iron oxidation Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 1252.5617 2095.63425 1902.3245 1228.2571 3260.8126 1554.5416 1532.5333 1747.0762 1569.87475 1984.0771 1748.895 1380.6366 68135519 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 1353.4517 900.4272 1190.5512 1334.9608 812.8892 658.4369 856.002 853.9486 1064.0175 1201.2061 893.4541 71836241 nifH Nitrogen Nitrogen fixation Pelobacter propionicus DSM 2379 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter propionicus; 1164.6608 1493.6568 571.5181 1056.2709 1820.9876 1524.8384 702.1844 1250.916 1571.0222 1098.3766 969.4647319 840.1314 162568505 aoxB Metal Resistance Arsenic Acidovorax sp. 75 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax; 1117.5403 1024.9219 1049.0386 774.5413 1058.5414 1415.7036 844.7576 1102.1509 733.0602 163794229 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid alpha proteobacterium BAL199 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 967.2329 616.1543 803.7434 551.4371303 463.684 437.7321 503.886 867.6245 1359475 oxyR Stress Oxygen stress Acinetobacter sp. ADP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter; 783.5193 660.7652 481.3167001 406.7747856 471.747779 665.8318 377.4929093 788.9919277 94426475 obgE Stress Radiation stress Oceanobacter sp. RED65 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Oceanospirillaceae;genus:Bermanella; 2155.2121 1140.6881 1272.205 1889.2585 1017.3497 823.3885 1093.973 1183.3863 701.3475 871.9806 2243.4415 1111.0431 158448660 cda Carbon cycling Carbon degradation Starch Coprococcus eutactus ATCC 27759 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Coprococcus;species:Coprococcus eutactus; 1012.634 1931.7332 1629.0815 692.7934 2436.1676 1335.8807 1317.3901 1087.6173 1347.5723 1617.4937 1507.2556 809.3022 209874453 CopA Metal Resistance Copper Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 3759.3642 5028.4544 3731.2973 5509.665 2522.0353 5347.8152 6085.3343 5518.1321 4533.37 4184.962 4233.952 3701.2524 145702396 ABC_transporter_I Bioleaching other category Metallosphaera sedula DSM 5348 1149.1465 1220.1124 1641.3189 849.9999 897.4307 1359.0779 1133.7632 1570.0452 1295.9791 1052.65 1378.2746 109648488 akbF Organic Remediation Aromatics BTEX and related aromatics Desulfitobacterium hafniense DCB-2 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium;species:Desulfitobacterium hafniense; 2118.3001 1362.5359 1650.8859 1895.258 2070.8742 1395.0328 1135.5525 1698.6047 1166.3381 1435.8491 2824.3324 2157.8463 213536669 exoglucanase Carbon cycling Carbon degradation Cellulose uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 525.1521216 709.4672 556.5151647 707.2854 768.6006 634.141964 681.4692 490.0657 634.8321 839.918 578.8028179 19552303 pobA Organic Remediation Aromatics Aromatic carboxylic acid Corynebacterium glutamicum ATCC 13032 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium glutamicum; 978.5832 1826.6453 1020.2066 603.4034 1597.1513 1007.0218 2220.8769 543.8208 1201.7858 809.4671 791.923 861.5675 17221931 napA Nitrogen Dissimilatory N reduction Azospirillum brasilense superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Azospirillum; 522.5701 629.7498 488.760941 803.5415 353.5706912 741.4109 677.5837 689.8074 612.9571 161393801 gyrB other category gyrB Roseobacter litoralis Och 149 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter litoralis; 3982.0673 4445.3296 2481.7884 4155.2811 4899.9276 2743.4468 4888.7143 2658.5098 2791.3414 2980.6492 2974.294 3245.8603 49333367 exoglucanase_fungi Fungi function carbon degradation Volvariella volvacea superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Pluteaceae;genus:Volvariella; 2117.0106 1768.3736 2639.9344 2487.8677 2915.5026 1538.5533 1640.9422 2092.3203 1272.2735 1551.969 2578.4646 1970.3174 94554279 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Deinococcus geothermalis DSM 11300 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus geothermalis; 4019.9508 4949.1065 4862.2802 5184.1296 2656.5912 5146.339 4088.0694 3988.4304 4458.6653 4731.3252 6701.495 5202.2713 163761225 pcaG Organic Remediation Aromatics Other aromatics Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 2525.7286 2046.5096 2110.8716 2288.83585 3114.6156 2155.5451 1759.2691 1703.9729 2575.906 1932.717 2397.7155 2170.20545 99030545 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 3778.3843 2254.8461 2881.9296 4049.9198 2750.9528 3329.0304 3886.3081 4008.1241 2921.6115 2918.6531 2846.7233 3001.9326 436027 gyrB other category gyrB Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 4330.9487 2654.2233 5330.2626 5478.8045 1723.1753 3019.166 2101.0704 3428.3173 2859.6974 3134.7462 1961.2966 2344.7436 254284386 P450 Energy process Energy process gamma proteobacterium NOR51-B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 2485.795264 1819.698765 3850.3175 4216.6872 3073.4545 4017.5581 2399.457457 3794.3384 1628.784437 2264.868124 3216.4379 3085.2193 50982452 pmoA Carbon cycling Methane Methane oxidation uncultured bacterium superkingdom:Bacteria; 2682.591 3932.378 3162.3236 2830.4702 6786.0349 3906.5974 3289.7416 3531.3126 3621.7475 4289.6474 2890.1358 3539.9523 145596555 linB Organic Remediation Pesticides related compound Salinispora tropica CNB-440 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora tropica; 1712.0672 6920.2906 5379.8568 7558.4997 7049.5535 9230.0936 3563.903 4337.7234 5677.6217 7116.4341 5248.4149 8109.6384 111610925 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 472.7121308 1172.9267 487.7955237 1001.4427 704.7702 841.605 440.1379895 799.816 522.534 889.4868345 618.7638181 253782483 sigma_70 Stress Sigma factors Photorhabdus asymbiotica superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Photorhabdus; 824.8774 626.2471807 1029.8463 525.1623154 467.1136 1432.4438 663.6749 638.8884 997.3942 261253991 pilin virulence pilin Vibrio orientalis CIP 102891 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio orientalis; 1229.9955 793.5426 652.2434499 601.7049 1081.9069 772.0735 824.4169 2675.48 1132.7542 692.4092 864.15385 89332519 nrfA Nitrogen Dissimilatory N reduction Desulfitobacterium hafniense Y51 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium;species:Desulfitobacterium hafniense; 2897.8972 6954.0711 7578.5324 4242.0139 5441.6522 4570.8061 3751.3724 7017.7304 6094.6187 6348.3946 3190.9238 7033.5167 118646085 tfdA Organic Remediation Aromatics Chlorinated aromatics Burkholderia ambifaria MC40-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ambifaria; 1229.0149 722.0824 1291.0918 1250.3923 1646.3583 1217.232 1369.4653 1204.2554 1273.0534 1406.3847 99030563 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 1569.1341 1657.3477 1625.0492 1245.9132 2340.2892 1478.8579 1327.3577 2056.0196 1355.7382 1575.5637 2658.7548 1702.5091 227516146 sigma_70 Stress Sigma factors Atopobium vaginae DSM 15829 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Coriobacteriales;family:Coriobacteriaceae;genus:Atopobium;species:Atopobium vaginae; 676.5042 1001.1189 1015.4668 665.1107 834.8832 612.2610751 824.9273 611.7984 629.1707 716.4394 850.3508 657.0517 238938897 AceA Carbon cycling Carbon degradation Others Zygosaccharomyces rouxii superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Zygosaccharomyces; 1380.1148 2161.5834 1910.2994 1949.6098 2331.8712 2034.1299 1738.0033 1958.9918 1589.7769 2111.1513 3271.2381 2444.4404 115422350 catechol_B Organic Remediation Aromatics Other aromatics Bordetella avium 197N superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella avium; 893.3955 3022.5851 2678.6967 1094.1994 1148.3601 2049.3405 2744.8599 2632.2919 2588.2073 2731.0121 810.3978474 19845.8869 146275789 katE Stress Oxygen stress Novosphingobium aromaticivorans DSM 12444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium;species:Novosphingobium aromaticivorans; 2547.6635 1995.0637 2724.845 1960.7322 3096.3197 1947.1741 1924.9795 1951.7776 1984.0701 1975.4008 3383.5291 2815.1452 302421938 glnA_fungi Fungi function nitrogen Verticillium albo-atrum VaMs.102 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Plectosphaerellaceae;genus:Verticilium;species:Verticillium albo-atrum; 2147.7572 2433.6751 3434.7499 1684.8093 1342.8912 2853.6149 1819.419 2774.4687 2755.2647 2154.7228 1842.3748 2878.4238 283438016 sigma_24 Stress Sigma factors Pirellula staleyi DSM 6068 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Pirellula;species:Pirellula staleyi; 2956.2203 1853.0734 2423.7468 3596.7783 1827.0736 1889.5625 1762.9625 1873.6082 2036.1758 2519.5418 2760.4269 2452.2679 148498545 sigma_70 Stress Sigma factors Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 7039.5043 24389.71928 7351.3093 7402.3479 3705.4896 8701.5533 6115.5354 7299.2032 8822.2753 6704.18 3857.1741 6313.3923 238792301 MATE_antibiotic Antibiotic resistance transporter Yersinia intermedia ATCC 29909 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia intermedia; 487.6086343 507.8083 374.9397811 543.2016 431.7731 569.334999 92394638 TerD Metal Resistance Tellurium Psychrobacter cryohalolentis K5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Psychrobacter;species:Psychrobacter cryohalolentis; 1882.9529 2725.5306 1959.4138 1950.8837 1533.2008 4012.8319 3003.3759 2330.5203 3873.9703 3066.1619 1280.0068 2993.1988 212710899 ppk Phosphorus Phosphorus utilization Providencia alcalifaciens DSM 30120 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia alcalifaciens; 1637.9209 549.9305 1156.6452 1437.5415 565.9601092 952.3117 974.6367 1315.4318 776.4715 1044.9862 1190.7074 1331.0079 119479429 ABC_multidrug_fungi Fungi function metal resistance Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 727.8063589 1168.161 850.0828753 672.8898995 928.5433 1063.9305 1185.6086 998.9293 1351.6494 885.4325 906.0157601 1057.4595 120590300 pimF Organic Remediation Aromatics Aromatic carboxylic acid Acidovorax avenae subsp. citrulli AAC00-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax citrulli; 738.1895845 870.0872 1338.9412 732.2971 918.9118 781.0772 774.8942 1709.559 791.5918 757.5654 1289.4401 156043008 endochitinase_fungi Fungi function carbon degradation Sclerotinia sclerotiorum 1980 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Sclerotinia;species:Sclerotinia sclerotiorum; 1129.7502 1339.2553 1746.2213 1151.6468 1349.5806 1886.3592 670.9035 1494.3489 1294.3367 935.7341918 943.5497 209517641 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1414.77015 1170.9835 1460.62945 1606.4115 1200.423 1303.6424 1541.56995 1583.7472 1218.66515 1375.12595 1215.5488 1364.50795 94471163 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 984.77545 1026.71225 1769.9061 961.3334 1706.3203 1138.16605 1433.885435 867.31955 2056.9342 759.0729 1495.1231 1057.1917 13173333 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 1477.5124 1368.8563 1596.072 1351.1102 1933.9674 1435.2802 1187.2833 1872.6278 1111.9842 1414.0745 2630.4298 1438.1065 78692508 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 5826.6888 4029.196 7211.5848 4096.2174 4725.9486 5280.2576 4328.4625 6346.149 5953.3171 4996.8075 3406.0641 5788.4321 123978711 pcc Carbon cycling Carbon fixation Hyperthermus butylicus DSM 5456 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Desulfurococcales;family:Pyrodictiaceae;genus:Hyperthermus;species:Hyperthermus butylicus; 2584.8844 1152.7043 1651.9473 2070.6137 1781.0967 1204.5346 1321.3932 1624.7807 1945.5821 1933.7499 1703.4885 1520.7752 85671599 nasA Nitrogen Assimilatory N reduction Roseovarius sp. 217 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 6517.9417 1750.3556 3173.0828 5756.6725 2612.6809 2170.0826 3179.8797 3152.5215 2075.0367 3034.9628 5262.1089 2905.3118 115367542 endochitinase Carbon cycling Carbon degradation Chitin Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 2364.8097 1988.9982 2097.0591 1236.2564 736.8989838 2193.893 1878.9036 2750.4175 2295.9238 1839.1477 2463.5559 118502813 glnA Stress Nitrogen limitation Pelobacter propionicus DSM 2379 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter propionicus; 690.4872 514.5699 640.3626 766.3153 629.8302 595.1558 618.4538 58530656 gyrB other category gyrB Ferrimonas sp. A3B-57-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Ferrimonadaceae;genus:Ferrimonas; 605.0747512 750.4346 901.3382 908.6168 547.8896832 705.18 631.1166 849.7981933 1003.1618 71848035 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Dechloromonas aromatica RCB superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Dechloromonas;species:Dechloromonas aromatica; 1938.2402 1885.3502 1697.6594 2297.0886 2065.6035 1906.0742 1623.1404 1236.7177 1778.711 2143.5117 1880.8862 1206.84 83574975 sigma_24 Stress Sigma factors Rhodospirillum rubrum ATCC 11170 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum rubrum; 2776.2141 1823.0901 931.3558 2595.8864 1495.6988 2046.2744 3541.6048 2622.2333 1760.5503 2472.5088 1880.67 1323.5512 152993847 pstC Stress Phosphate limitation Sulfurovum sp. NBC37-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;genus:Sulfurovum; 545.6230607 1568.0606 1657.1815 949.2796 1776.6033 709.3767 1245.9764 1227.4338 1149.6452 1995.2435 898.0636171 1499.7784 84711569 pcc Carbon cycling Carbon fixation Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 995.8974 486.1795 750.5137 1070.2698 571.0568036 606.9242 1560.616 839.2826 828.3384 1486.7626 830.8757 83845876 ppx Phosphorus Phosphorus utilization Sulfitobacter sp. EE-36 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sulfitobacter; 4513.1847 3208.1039 2949.829 5329.9398 4749.667 2752.8095 4850.484 3330.2485 3129.1955 3401.736 3604.2671 3152.2469 145238118 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 828.16863 552.7203466 1225.1888 479.8467574 442.2320402 489.941173 1293.196233 198264911 phn Organic Remediation Herbicides related compound Octadecabacter antarcticus 238 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Octadecabacter;species:Octadecabacter antarcticus; 2636.2092 1836.9285 2108.618 2370.4389 1901.5656 2197.3329 2518.4605 2655.8469 1861.0108 2690.9692 2434.1007 1859.5797 124875211 linB Organic Remediation Pesticides related compound Burkholderia cenocepacia PC184 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia cenocepacia; 1448.3106 2313.0796 1467.3103 1730.2029 2950.9948 2001.7346 1880.67 1126.6657 1971.3495 2315.1735 1723.6212 2025.5077 161729069 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae; 1867.7206 1780.7084 1925.7403 2039.6162 2492.0414 1817.5031 1507.5664 1623.0982 1485.2976 1815.687 2834.2065 2120.769 219863991 glnA Stress Nitrogen limitation Cyanothece sp. PCC 7425 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 735.0825 775.8118 862.1557828 514.1491 1122.5976 54013974 nmoA Organic Remediation Aromatics Nitoaromatics Nocardia farcinica IFM 10152 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Nocardia;species:Nocardia farcinica; 3863.0078 1446.2036 2329.5745 3213.138 2491.5674 1568.0621 1971.7665 3818.668 1600.5639 2079.0142 3438.9778 2263.0773 111611621 nitA Organic Remediation Aromatics Other aromatics Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 9637.2166 8703.6877 4521.7509 9049.7766 6739.9822 5472.76 5008.3258 4283.6778 5238.2587 5444.5821 13187.6094 5225.1998 58416260 cbdA Organic Remediation Aromatics Chlorinated aromatics Achromobacter xylosoxidans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Achromobacter; 1445.2212 1329.2779 1456.8419 1807.0186 1309.6324 1126.0667 1220.1712 1097.5162 956.3841 824.5244 957.1859 8515785 cumA Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 2913.3847 3896.84545 4020.57485 3625.7828 5008.1898 4074.7958 3177.9011 2887.8293 3939.34995 3987.7178 2782.28935 3164.87375 83724530 nasA Nitrogen Assimilatory N reduction Ralstonia solanacearum UW551 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 7876.7529 6068.986 5599.6502 8967.8106 2799.1669 8797.3334 9969.119 8908.1031 6346.4104 9803.2494 4294.0375 5225.5706 83594971 hrcA Stress Heat shock Rhodospirillum rubrum ATCC 11170 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum rubrum; 2406.35575 2822.40595 2676.43575 2546.6096 2699.169574 2710.7748 2341.7961 2037.51825 2173.41775 2035.1915 2654.5505 2288.7774 99081698 ppx Phosphorus Phosphorus utilization Silicibacter sp. TM1040 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 614.0843 1013.4409 1040.0385 718.7091 636.05339 1214.7497 1029.9003 1106.0763 1129.4809 957.8022 749.5675572 994.9087 133739792 pimF Organic Remediation Aromatics Aromatic carboxylic acid Herminiimonas arsenicoxydans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Herminiimonas; 2039.65405 1569.7172 2227.4783 1687.45285 1637.4972 1376.988 2263.54045 2951.6632 1332.7024 1916.0176 1744.3063 1624.9076 229362390 glnA Stress Nitrogen limitation Pseudomonas fluorescens SBW25 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 659.3646 871.2212 788.2001 1182.1786 861.199 778.9235 645.8197 602.4781 882.4419 953.6371 1054.1035 684.4889 116202789 xylanase Carbon cycling Carbon degradation Hemicellulose Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 2276.7744 1056.4215 1782.7445 2006.1532 1840.5728 1241.4168 1011.9494 1552.6877 1031.2104 1369.5985 2250.3125 1707.5214 63081978 nosZ Nitrogen Denitrification unidentified bacterium superkingdom:Bacteria; 2661.5828 1153.9913 3347.8619 2844.3595 1076.122403 1137.7778 2335.7009 1462.5356 1117.0693 1125.384394 1918.7661 124516417 ABC_transporter_II Bioleaching other category Leptospirillum sp. Group II UBA 1732.3365 642.3856466 1100.1578 639.9969665 623.7773324 673.9332 601.5702 697.3985 1047.748 981.2609 611.0462641 3242405 gdh Nitrogen Ammonification Thermococcus profundus superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Thermococcus; 751.9174715 554.246059 686.8487 579.2434 490.5868 160879970 APS_AprA Sulphur adenylylsulfate reductase Clostridium phytofermentans ISDg superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium phytofermentans; 1995.0723 1767.8511 1228.55015 1878.0402 2025.7126 1752.159 790.4363 2393.6925 1056.11585 920.1824 2484.9368 1631.706513 110818358 TerD Metal Resistance Tellurium Rhodococcus jostii RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1566.7835 676.8336 988.8481782 1278.552448 1034.392538 20254.58407 1361.7569 2566.539611 740.9772 1445.0056 1383.2732 160897479 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 1427.1279 866.2134 1866.9136 1060.5172 753.659184 891.6275313 1313.6622 1976.0225 937.0521 1220.4371 1448.955 183600440 AceA Carbon cycling Carbon degradation Others Providencia stuartii ATCC 25827 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia stuartii; 1205.4412 1026.9225 1240.4653 1056.8325 1123.9971 974.7761 889.6194 841.6101 1157.217 943.3082 1231.6693 1142.3391 165921961 pstB Stress Phosphate limitation Yersinia pestis biovar Orientalis str. F1991016 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia pestis; 2546.6292 722.593881 1789.927 1670.646 1195.7021 1239.0686 1821.6213 1448.4215 1326.7673 1591.9337 1554.512 1157.8155 187477166 nahA Organic Remediation Aromatics Polycyclic aromatics Bordetella avium 197N superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella avium; 3274.59132 4478.9891 4687.09395 3561.651 3739.5219 4829.0638 5163.9194 3834.406585 4432.325703 3790.7863 3281.79685 4399.623735 88864470 pimF Organic Remediation Aromatics Aromatic carboxylic acid Jannaschia sp. CCS1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Jannaschia; 1145.3317 423.5381067 664.9655413 595.2113525 634.2901562 459.303526 634.2147 832.2913 871.4203344 707.0786 238842421 enniatin_synthase_Fungi soil_borne_pathogen fungi toxin Arthroderma otae CBS 113480 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma;species:Arthroderma otae; 2124.8417 2564.1971 3738.5815 1962.0883 2471.8305 1677.1682 1883.744 4194.4451 2013.8565 1428.227662 4224.4863 3199.7333 178468918 amyA Carbon cycling Carbon degradation Starch Streptomyces griseus subsp. griseus NBRC 13350 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces griseus; 4493.9094 2575.2832 3697.4493 4952.9428 3264.6993 3297.7717 2984.06 2393.7046 3747.6026 4117.6394 4676.6293 3041.3307 163811643 rd Organic Remediation Chlorinated solvents Dehalococcoides sp. VS superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides; 2990.9696 1030.5414 1914.4286 3111.3243 1416.5807 1477.6065 1829.2948 911.0765 1718.5676 2393.9528 3439.9869 1128.3459 169627455 katE Stress Oxygen stress Mycobacterium abscessus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 11788.6139 5233.3547 8441.4509 10545.9299 5970.6801 7113.2404 6523.4396 12001.3015 9077.2123 8921.312 11719.3457 7232.6495 241869638 katE Stress Oxygen stress Sphingobacterium spiritivorum ATCC 33861 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Sphingobacteriaceae;genus:Sphingobacterium;species:Sphingobacterium spiritivorum; 1031.1437 990.3132 1233.6608 978.8236583 2036.4627 1171.9448 835.3193 1139.2541 960.8625 952.4646 1620.988 1393.0644 83814764 fnr Stress Oxygen stress Salinibacter ruber DSM 13855 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Rhodothermaceae;genus:Salinibacter;species:Salinibacter ruber; 6118.5054 3092.1467 6036.5327 5328.9399 3399.8239 4374.789 3844.155 3704.4279 3964.1097 4745.8639 4453.4648 5012.472 266627085 Tet Antibiotic resistance other Caulobacter segnis ATCC 21756 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter;species:Caulobacter segnis; 1559.4763 2382.5138 1648.5887 1118.7453 2807.1678 1558.52 2917.6703 1243.2177 1904.3215 1498.035 2246.4686 1530.4428 262335245 AceB Carbon cycling Carbon degradation Others Rhodothermus marinus DSM 4252 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Rhodothermaceae;genus:Rhodothermus;species:Rhodothermus marinus; 4883.7549 5489.5693 5844.4661 4973.9137 3248.7543 6707.7156 4815.9012 5324.73 6773.3789 5650.4691 3551.5812 6284.2111 187976335 phospholipase_C_fungi Fungi function carbon degradation Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 437.734227 436.2294 39933662 ChrA Metal Resistance Chromium Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 976.9847 850.591 945.241 1105.8081 909.9676 1221.7205 1156.4249 949.8405 954.0105189 124111041 tutFDG Organic Remediation Aromatics BTEX and related aromatics uncultured bacterium superkingdom:Bacteria; 765.9811678 655.5551308 927.6238 658.1017618 1055.5362 690.443624 644.4425 827.6126 8246808 TerZ Metal Resistance Tellurium Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 3266.0362 3204.2429 1970.7837 4776.3817 2288.2832 2766.6141 2809.1735 2980.4955 2007.5194 2507.3593 1980.1559 2501.5807 95930255 ZntA Metal Resistance Zinc Desulfuromonas acetoxidans DSM 684 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Desulfuromonadaceae;genus:Desulfuromonas;species:Desulfuromonas acetoxidans; 1513.511 1239.188 1565.1465 1541.4373 1780.2246 1938.3499 1116.0761 995.436664 1250.6997 1254.3384 2058.5722 1142.243 83634171 nosZ Nitrogen Denitrification Hahella chejuensis KCTC 2396 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Hahellaceae;genus:Hahella;species:Hahella chejuensis; 904.0473 2265.2313 2040.4423 1234.2018 904.5026 2481.6968 1972.0418 2010.3744 4930.9132 3180.3277 904.8625793 2523.0719 151282291 pimF Organic Remediation Aromatics Aromatic carboxylic acid Janthinobacterium sp. Marseille superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Janthinobacterium; 1608.0206 1661.4126 1206.3847 1651.8941 1097.3779 2029.2392 1414.7723 875.0784 1323.9715 1775.5213 1734.2583 34392447 glucoamylase Carbon cycling Carbon degradation Starch Penicillium chrysogenum superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium; 704.8195 1031.1276 1497.0145 906.3926 1334.7323 821.7583 956.6973 1826.9342 980.8987 1508.1295 1730.3583 77975106 B_lactamase_C Antibiotic resistance Beta-lactamases Yersinia frederiksenii ATCC 33641 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia frederiksenii; 1186.4614 1702.4946 1753.8254 1409.1192 1206.108752 1918.1589 1503.3569 1646.1205 1631.2355 1648.2573 1396.477993 1869.5906 199594029 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 884.6645 1223.89055 802.34695 780.7452 2091.9572 1139.07085 841.59925 1025.49815 1162.1503 1249.7937 755.8620027 719.067 239598297 narH Stress Oxygen limitation Staphylococcus warneri L37603 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Staphylococcaceae;genus:Staphylococcus;species:Staphylococcus warneri; 5544.6911 1630.5501 3896.146 4082.6295 2341.7681 2560.4567 2518.2655 2714.7705 2692.3255 3255.623 3588.531 3032.9677 145619313 bclA Organic Remediation Aromatics Aromatic carboxylic acid Geobacter bemidjiensis Bem superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter bemidjiensis; 934.3372 610.3684 702.6061 1021.9997 579.7815865 585.3143 556.5813 514.3953 717.5395 822.7552 996.5977 78221401 mer Metal Resistance Mercury Geobacter metallireducens GS-15 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter metallireducens; 3734.1249 3858.828 4047.124 3838.6355 2313.4046 4392.7515 2862.6935 3995.8503 3177.7716 3245.5621 6678.143 4627.2659 229318240 AceB Carbon cycling Carbon degradation Others Rhodococcus erythropolis SK121 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus erythropolis; 760.4873266 726.2839 445.6309789 513.4222 579.2147869 258521952 pcc Carbon cycling Carbon fixation Corynebacterium genitalium ATCC 33030 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium genitalium; 2843.6845 2003.7668 2531.4262 3375.4674 2232.656 2443.0797 2024.9196 1791.0813 3206.8357 3226.2553 2195.7046 2268.4055 119474019 katE Stress Oxygen stress Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 540.4650288 1343.1928 1034.8479 852.5203 942.1372 1355.6828 1023.064 492.8887006 1072.005 1017.1519 1494.8211 262198633 proV Stress Osmotic stress Haliangium ochraceum DSM 14365 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Haliangiaceae;genus:Haliangium;species:Haliangium ochraceum; 6179.9313 8532.415 6488.7398 8180.9289 8383.1672 7613.9022 7278.5821 4097.8167 7869.4622 8731.0581 5937.1762 7746.2256 153834 pap virulence adhesin Streptococcus parasanguinis superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus; 748.9312 1000.9659 835.9723858 754.2251204 828.506 496.372 1039.9238 1105.8247 115432148 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 644.5085 688.5822 754.0077 1303.8662 970.2895 487.8143 465.4333 495.2767 479.9577045 224803720 fnr Stress Oxygen stress Opitutaceae bacterium TAV2 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae; 567.4743 1172.2896 1026.3418 1261.8919 975.6805 888.3362 1108.5381 1068.9672 256805284 sigma_70 Stress Sigma factors Streptomyces viridochromogenes DSM 40736 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces viridochromogenes; 1579.3695 1408.8551 1511.6703 1310.4422 3403.1418 1751.1719 1798.9676 1742.3011 1781.332 1914.3314 971.8191428 1439.5072 160917508 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 539.75 480.4592428 543.8183163 514.9151 459.3826 453.8775 419.3782522 544.6799 260063846 dsrA Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 1027.0872 1184.446 855.9831 1189.9451 960.0161 670.8045 842.7062 894.651 1046.9831 1173.7167 1157.431 49651987 AceA Carbon cycling Carbon degradation Others Yarrowia lipolytica superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Dipodascaceae;genus:Yarrowia; 482.7192499 544.567198 774.9571084 615.7907332 702.6776 841.8447013 740.9073 705.8424 679.6139 32399643 phenol_oxidase Carbon cycling Carbon degradation Lignin Pleurotus sajor-caju superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Lentinaceae;genus:Lentinus; 720.9786 647.0287 619.8348309 1130.3865 689.3153062 477.1615 968.8623 618.4285631 646.7496 733.3623 154245259 phn Organic Remediation Herbicides related compound Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 1905.049 2123.5468 1800.3809 1982.5661 4577.0784 1903.9803 3534.1951 1572.5871 1830.7701 1714.0835 1891.1687 1452.5254 227509158 ara Carbon cycling Carbon degradation Hemicellulose Lactobacillus brevis subsp. gravesensis ATCC 27305 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus brevis; 1381.1491 2034.5528 1825.8541 2121.2946 1399.1568 2102.0315 2154.0743 1599.6401 2257.4241 1917.5921 2189.1459 1568.8796 113524907 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 1129.488092 3475.6594 2192.6853 1358.3425 2904.6957 14372.34902 2410.6748 3014.6901 2272.9987 2358.7561 3310.4023 6561863 amyA Carbon cycling Carbon degradation Starch Emericella nidulans superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella; 1068.5124 864.5441 1609.8264 541.5592295 659.662 881.6361 1672.8831 830.6935 779.6415 1422.9734 188026261 nrfA Nitrogen Dissimilatory N reduction Providencia stuartii ATCC 25827 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia stuartii; 3546.5832 5034.6473 5984.903 3986.9386 6161.8301 4595.2596 4934.1249 6286.826 4050.1371 6572.762 4211.513 5883.1029 90200171 limEH Carbon cycling Carbon degradation Others Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 1511.8454 519.2486 1348.8638 614.4585166 451.1979899 2458.8861 502.5802318 732.5414 777.4294 197119539 sigma_24 Stress Sigma factors Geobacter bemidjiensis Bem superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter bemidjiensis; 4132.9164 7848.6622 7865.7454 4256.3689 4620.3061 7314.0585 6292.5784 7300.7646 7483.6262 7753.7481 4919.7823 8316.5437 119503070 hrcA Stress Heat shock marine gamma proteobacterium HTCC2080 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 626.6704 747.0068 498.7124346 558.3739643 462.5484 563.2118 605.8379 527.1011 209869140 dsrA Sulphur sulfite reductase uncultured marine bacterium superkingdom:Bacteria; 1184.8495 1495.9505 1617.0089 1210.7105 1496.29605 867.36 1595.74955 1373.4355 1157.28685 878.1296 1626.4176 1493.4135 311069865 CysJ Sulphur sulfite reductase Bacillus atrophaeus 1942 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus atrophaeus; 957.8706 1470.3762 844.5696 1193.301 1018.7775 1315.7154 1081.2868 1117.564 752.5405 916.9951 789.0607 240102613 pstB Stress Phosphate limitation Thermococcus gammatolerans EJ3 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Thermococcus;species:Thermococcus gammatolerans; 1923.8811 4459.0448 3593.6374 2051.3687 4508.0846 3555.2293 2195.1836 2110.392 2825.5776 3185.5759 1987.5074 3444.2515 109699047 SMR_antibiotics Antibiotic resistance transporter Pseudoalteromonas atlantica T6c superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Pseudoalteromonadaceae;genus:Pseudoalteromonas;species:Pseudoalteromonas atlantica; 855.5616747 827.6592 719.1864 36668.17221 813.7487813 89512810 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 670.5844426 831.1756333 913.7805694 531.2303098 634.7299 617.58285 844.9468333 745.8348 703.8684667 682.9760646 84686646 phtA Organic Remediation Aromatics Aromatic carboxylic acid Rhodobacterales bacterium HTCC2654 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Maritimibacter;species:Maritimibacter alkaliphilus; 1295.0346 1451.7211 1406.419 1320.0031 1234.9104 2363.602 16188.15811 1562.008 1958.757 1951.1361 1148.328 1865.8417 40143 sigma_70 Stress Sigma factors Bacillus subtilis superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 1585.5349 5006.3079 2399.713 1415.9405 4148.1189 2128.2947 3424.8723 1950.6882 2909.019 2205.2845 2546.9683 1617.2587 310793135 phospholipase_C_fungi Fungi function carbon degradation Glomerella graminicola M1.001 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Glomerellaceae;genus:Glomerella;species:Glomerella graminicola; 905.7532 1107.5319 1150.5373 1529.3552 1477.7553 1113.6267 1056.3015 670.60326 77166113 nitA Organic Remediation Aromatics Other aromatics Nitrosococcus oceani ATCC 19707 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Chromatiaceae;genus:Nitrosococcus;species:Nitrosococcus oceani; 840.9961 676.7861816 837.2462537 724.0823601 534.5188597 545.7548577 503.4436846 579.3377 1291.7068 829.7331814 15186893 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 4923.3668 2119.2653 2426.9019 4525.9225 2628.9102 2719.3523 2618.7103 2143.2067 2369.9877 2718.528 3875.8653 2987.2115 83744449 pobA Organic Remediation Aromatics Aromatic carboxylic acid Streptomyces hygroscopicus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 2534.830148 1901.8009 2752.04835 2333.321919 3364.8246 2671.91835 2140.8377 2026.31575 2091.1355 2354.6525 2618.092927 2331.80085 312195889 cat_bac soil_benifit Frankia sp. EuI1c superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 1431.2919 1420.591 1315.4309 1228.5447 2492.8377 1770.3309 1316.6789 1772.8886 1871.2269 1491.8935 1117.0239 1467.3976 171325525 SMR_antibiotics Antibiotic resistance transporter Geobacillus sp. WCH70 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 2819.1034 5575.1228 3603.9314 3796.2416 5580.3412 4088.8098 4287.6973 2568.103 4632.2228 4663.0982 1588.0984 2959.5683 161378972 ArsC Metal Resistance Arsenic Oceanibulbus indolifex HEL-45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 1212.0499 2575.7164 1764.7446 1879.6702 1129.7608 1907.3604 1813.638 1390.7204 2218.7729 2392.4118 1119.25812 2114.6993 77681325 lip Carbon cycling Carbon degradation Lignin Trametes cervina superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Trametes; 5121.7618 4646.9551 6258.1435 3291.2824 2925.153 5974.1695 4726.7317 5982.3833 5821.6375 5086.0386 2025.7305 5824.3971 257057127 hly virulence hemolysin Saccharomonospora viridis DSM 43017 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharomonospora;species:Saccharomonospora viridis; 6045.7427 10978.5524 8675.0858 10064.1879 9996.3014 15006.5859 12063.1811 9789.6935 16390.8689 11821.9648 7718.6006 11169.6039 220962102 linB Organic Remediation Pesticides related compound Ancylobacter aquaticus superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Ancylobacter; 1458.9355 761.5588 1137.8397 1127.4798 1426.2769 1573.9186 877.7707 1160.8976 699.7165097 154280953 tftH Organic Remediation Aromatics Chlorinated aromatics Ajellomyces capsulatus NAm1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces capsulatus; 5405.2236 3152.3298 3923.8291 5062.4545 3937.0803 4713.7433 10795.92886 4735.5666 4078.712 4696.1174 3051.0766 3809.6144 6322485 nbaC Organic Remediation Aromatics Nitoaromatics Saccharomyces cerevisiae superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Saccharomyces; 588.2036885 671.8115 1070.2658 824.1214 605.9721 651.2946 505.4008 715.9034 1336.5848 798.0692 229468987 amyA Carbon cycling Carbon degradation Starch Exiguobacterium sp. AT1b superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;genus:Exiguobacterium; 4323.6953 983.2283 2709.7239 3506.3472 2074.1163 1806.8093 2225.075 1290.3155 1971.3611 2332.6266 3903.3494 2134.5288 115377153 pstA Stress Phosphate limitation Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 6067.1269 1884.866 3428.8178 5233.4544 3141.5192 2735.2957 2947.3782 2275.1312 2955.6031 3642.1832 4023.1841 3182.6503 178467913 SMR_antibiotics Antibiotic resistance transporter Streptomyces griseus subsp. griseus NBRC 13350 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces griseus; 3502.3641 3384.2953 3689.947 1376.1903 3279.7345 2960.6607 4018.2311 3213.196 2801.8185 3544.9234 116750541 sigma_24 Stress Sigma factors Syntrophobacter fumaroxidans MPOB superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Syntrophobacterales;family:Syntrophobacteraceae;genus:Syntrophobacter;species:Syntrophobacter fumaroxidans; 3520.7932 1455.4801 1939.9309 3053.9865 2306.5792 1588.5073 2156.1046 2648.778 1876.5388 2347.1095 3522.8237 2414.4765 148260770 nitrogen_fixation_genes Bioleaching Nitrogen Acidiphilium cryptum JF-5 1251.6886 423.7674733 829.0016 650.8809 606.5926834 871.5997 2228.0213 509.408 857.3823 850.1827 795.1167 212639427 CysJ Sulphur sulfite reductase Anoxybacillus flavithermus WK1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Anoxybacillus;species:Anoxybacillus flavithermus; 409.3113221 360.8063509 543.4133 330.4933841 542.3009 395.0372208 312.4934475 271.4674945 257201089 ara Carbon cycling Carbon degradation Hemicellulose Roseburia intestinalis L1-82 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Roseburia;species:Roseburia intestinalis; 1312.5638 1100.944 1632.2899 1251.4059 1450.4803 1641.6321 952.1054 1026.7086 1045.4105 1215.133 712.7858928 1280.514 67854934 TerD Metal Resistance Tellurium Crocosphaera watsonii WH 8501 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Crocosphaera;species:Crocosphaera watsonii; 1896.3717 1399.3619 1957.1747 1469.1828 1509.8146 1881.9602 1438.3641 1513.0316 114538901 grpE Stress Heat shock Fulvimarina pelagi HTCC2506 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Fulvimarina;species:Fulvimarina pelagi; 1034.3541 1018.5889 990.5025 1104.8561 736.1798 1297.8169 2367.1912 6775.4876 1315.3047 1331.5544 1202.8638 819.0522 118744352 hydrogenase Energy process Energy process Geobacter lovleyi SZ superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter lovleyi; 879.52 353.275482 822.3097 946.8688 575.2039 702.5514 697.4603 845.7916 575.0146 247538086 narI Stress Oxygen limitation Dickeya zeae Ech1591 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Dickeya;species:Dickeya zeae; 2939.6314 2983.733 4236.3118 4132.7487 3755.2394 3048.5402 4019.3742 3130.2859 2736.1138 2654.0417 3059.2209 4046.0168 197333185 amyA Carbon cycling Carbon degradation Starch Streptomyces sp. Mg1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 1543.4247 2749.3082 3615.117 2206.3836 3720.0315 2137.2535 2432.9615 3518.1794 2612.6234 3373.9427 2160.6287 4048.7358 109698930 pimF Organic Remediation Aromatics Aromatic carboxylic acid Pseudoalteromonas atlantica T6c superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Pseudoalteromonadaceae;genus:Pseudoalteromonas;species:Pseudoalteromonas atlantica; 3983.0925 5621.8115 5122.6388 3222.4249 4960.7435 3000.3061 5944.8125 3604.9308 3056.5411 3487.1482 4996.9253 2900.0248 229536181 Tet Antibiotic resistance other Planctomyces limnophilus DSM 3776 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Planctomyces;species:Planctomyces limnophilus; 1364.1707 1026.9862 1374.1995 1458.6631 1020.8193 1237.0495 938.5055 1185.9766 830.1032 1016.8057 1416.899 1252.7198 75674396 dnaK Stress Heat shock Nitrobacter winogradskyi Nb-255 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter winogradskyi; 1642.2461 2711.0806 11701.82326 1581.119 3564.7719 2250.0389 2645.4474 2130.4488 2895.1684 2467.6179 2303.0465 2306.911 12001884 nifH Nitrogen Nitrogen fixation uncultured bacterium NR1626 superkingdom:Bacteria; 1258.0824 2161.4559 1410.1992 1735.8462 1959.1267 2197.5124 1730.5935 1488.0508 2138.0807 2285.3256 1209.7109 2255.0302 148502260 bphA Organic Remediation Aromatics Polycyclic aromatics Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 2870.6364 3386.3022 4351.59535 3145.438 3401.02785 4314.60485 3030.84705 3796.28115 3919.3429 3257.99595 3301.85745 3760.03375 157084263 silC Metal Resistance Silver Citrobacter koseri ATCC BAA-895 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter;species:Citrobacter koseri; 6007.6487 10380.9902 7043.1013 6362.9523 14025.0131 9096.3944 9066.8823 9234.4221 8608.2727 9901.369 5407.4818 7755.3988 115390426 ara_fungi Carbon cycling Carbon degradation Hemicellulose Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 839.2365 817.8554 529.0387091 783.874 734.6337 821.4488894 785.546 611.3743 157913102 sox Sulphur Sulphur oxidation Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 2279.0444 3162.0141 2855.9475 1768.4737 2117.9128 2363.3178 2097.3082 3989.2414 2210.2692 1850.035 2086.729 3077.0623 264673005 glnA Stress Nitrogen limitation Caulobacter segnis ATCC 21756 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter;species:Caulobacter segnis; 1162.2027 732.7606 748.4782 1133.4565 964.4526 552.8102659 643.9386 533.5926 689.7431417 914.9565 1087.3536 763.5846802 170736617 katE Stress Oxygen stress Burkholderia cenocepacia MC0-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia cenocepacia; 418.6468226 667.2766 686.4818 463.468756 686.6133 557.3613 488.9063729 909.9683 693.0792 743.4419 212008117 pstB Stress Phosphate limitation Thermococcus onnurineus NA1 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Thermococcus;species:Thermococcus onnurineus; 1068.5661 1125.0912 1280.9287 1133.4976 1416.8651 1571.5469 1005.4113 1107.6741 1108.4662 1291.8131 1695.2241 1189.6608 171277508 ara Carbon cycling Carbon degradation Hemicellulose Bifidobacterium dentium ATCC 27678 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium dentium; 7653.6827 8062.8391 5810.7636 5809.7915 10233.087 7660.476 5280.5946 6734.6841 8507.4978 7378.1422 6902.8452 5524.414 163739537 pcaG Organic Remediation Aromatics Other aromatics Phaeobacter gallaeciensis BS107 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 1984.8503 2116.2581 2425.54725 2359.29595 2217.95285 2035.1096 3043.8199 2140.0192 2026.53635 1732.67565 2237.4954 1786.57855 115395858 endoglucanase Carbon cycling Carbon degradation Cellulose Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 425.3361452 702.9558 680.4109 998.9969 654.8461 553.0829 826.4454 761.6859 535.0242375 169793364 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1932.085913 1352.99175 1924.65715 1496.56415 1421.66185 1267.8296 1510.5659 1820.9365 1524.1643 1899.9491 1407.0009 1744.791 62120299 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 596.9313 2038.554 1643.7906 719.0927 1379.6664 1466.2397 1783.1731 1802.1446 1870.1086 1881.6361 676.1724005 1828.833 88798286 sigma_38 Stress Sigma factors Reinekea sp. MED297 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;genus:Reinekea;species:Reinekea blandensis; 1926.6884 7794.0986 7862.8811 12980.7334 20153.1711 15124.6658 7048.8563 13158.1431 7275.3315 6732.0179 25097.7104 13536.9922 220712078 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 1652.186 854.7579 828.6634 1242.9956 1366.1971 1931.4143 1475.8618 873.0179 1782.009 643.6190659 110834500 sigma_24 Stress Sigma factors Alcanivorax borkumensis SK2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax;species:Alcanivorax borkumensis; 643.9578 925.3261 587.6879235 461.4826179 1104.0896 620.9701 545.3749 610.8179 583.2954744 629.3299 659.2351 167769981 CadA Metal Resistance Cadmium Anaerotruncus colihominis DSM 17241 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Anaerotruncus;species:Anaerotruncus colihominis; 2034.0931 2486.2637 2598.4823 1533.7803 633.6834521 2188.9724 2031.4347 2816.1074 2869.6106 1678.7975 31448.61931 2248.3425 114225881 CopA Metal Resistance Copper Alkalilimnicola ehrlichei MLHE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Alkalilimnicola;species:Alkalilimnicola ehrlichii; 565.3654 1022.1399 1131.7681 557.6673 1599.1799 697.6809 961.1936 546.2295 809.3332 728.019 913.6797 861.6774 267931127 tre_fun soil_benifit Beauveria bassiana superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Cordycipitaceae;genus:Cordyceps;species:Cordyceps bassiana; 1947.6697 4958.7526 4592.0639 3584.4642 2907.7481 5242.1789 4502.1905 4471.7056 5574.3539 5131.8546 1068.6384 5878.4751 217979565 nhh Organic Remediation Aromatics Nitoaromatics Methylocella silvestris BL2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Methylocella;species:Methylocella silvestris; 1446.4838 1034.0711 945.779 1445.3217 1921.4352 726.7559 2214.4307 1131.7011 1018.8043 989.9393 1143.4103 259026623 gyrB other category gyrB Ferroglobus placidus DSM 10642 superkingdom:Archaea;phylum:Euryarchaeota;class:Archaeoglobi;order:Archaeoglobales;family:Archaeoglobaceae;genus:Ferroglobus;species:Ferroglobus placidus; 761.5844 761.9538 1007.5864 649.5503 1091.7469 679.3595 694.2241 1365.9429 636.2067 731.034 1137.2286 755.5126 224027838 AprA Sulphur adenylylsulfate reductase uncultured alpha proteobacterium superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 2808.5053 1027.9292 1449.9066 1838.427 785.6249052 935.2915 1309.5674 1237.8676 1029.2418 1593.4412 1262.2767 1590.4669 219676517 B_lactamase_C Antibiotic resistance Beta-lactamases gamma proteobacterium NOR5-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 1383.5266 2263.5365 1294.2032 664.5491 3258.5754 2020.43 1417.9037 1952.7097 1663.4215 1883.7689 1698.7327 74058496 Van Antibiotic resistance other Enterococcus gallinarum superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Enterococcaceae;genus:Enterococcus; 1472.208417 1372.4751 953.6449 1685.1243 683.1867132 850.3547 981.8343 716.93605 1126.0386 1262.4844 1616.7117 880.1474 10175620 ArsC Metal Resistance Arsenic Bacillus halodurans C-125 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus halodurans; 1143.478 1411.1106 1661.3398 1914.0099 3122.6166 2591.8499 1361.8487 1128.6871 1211.1399 1608.1139 2169.0133 2344.4277 242805075 MFS_antibiotic Antibiotic resistance transporter Talaromyces stipitatus ATCC 10500 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus; 1571.6862 3335.504 3630.2624 1534.794 1817.3852 1925.2482 2548.7305 3394.7401 2559.2946 2318.4788 1761.9404 3856.1671 197934530 ara Carbon cycling Carbon degradation Hemicellulose Streptomyces sviceus ATCC 29083 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces sviceus; 2385.865112 1898.855716 2449.475123 2827.931951 2637.6127 2664.540397 2970.641876 2767.881135 1668.338284 2808.138107 2888.9105 1743.240274 86739031 glnA Stress Nitrogen limitation Frankia sp. CcI3 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 4652.3433 5401.1614 5471.8482 4996.0763 3785.1386 5080.636 4021.2209 5743.211 4748.421 5404.4499 6850.5917 6173.3773 15073683 ChrA Metal Resistance Chromium Sinorhizobium meliloti superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium; 1127.8294 1079.7348 1026.138 694.4342 376.562409 206287303 mycobacterium_LysB_lipase Bacteria phage LYSIS Mycobacterium phage Ramsey superkingdom:Viruses;order:Caudovirales;family:Siphoviridae; 528.8191599 1582.2686 1125.6179 615.0052 1421.2637 14494.19207 946.6264 1005.0783 882.2904 919.5795 931.9184 23452281 toxin virulence toxin Staphylococcus hyicus superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Staphylococcaceae;genus:Staphylococcus; 787.9654 1522.9265 1080.6763 647.0564063 1580.1256 10159.75442 1116.294 709.8066 733.6267 551.2316591 1272.0787 125861476 dsrB Sulphur sulfite reductase Methanoculleus marisnigri JR1 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanomicrobiales;family:Methanomicrobiaceae;genus:Methanoculleus;species:Methanoculleus marisnigri; 617.1469 717.7752224 463.9874192 436.0720906 114339594 sigma_24 Stress Sigma factors Maricaulis maris MCS10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Maricaulis;species:Maricaulis maris; 426.6256531 502.7069808 326.8050596 447.8783 147886074 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured bacterium superkingdom:Bacteria; 1300.7568 18645.38079 1153.674 622.9022 665.5934152 924.9953 118430838 merP Metal Resistance Mercury Aeropyrum pernix K1 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Desulfurococcales;family:Desulfurococcaceae;genus:Aeropyrum;species:Aeropyrum pernix; 1388.5593 853.1396 1057.3259 1348.9323 840.816017 899.6207 817.9649 1427.7595 831.7341 992.7644 1624.3515 1035.3779 170744039 sigma_24 Stress Sigma factors Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 4243.115 2807.8093 3967.7238 3057.8902 3175.5516 3066.8467 2791.6814 5756.6952 3391.5995 3966.6802 3333.4618 3709.0661 154367883 cumA Organic Remediation Aromatics Other aromatics Pandoraea pnomenusa superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Pandoraea; 1206.7777 1527.615733 1663.549767 1382.7583 1973.194733 1455.177 1474.581867 1147.7755 1230.500433 1240.4027 2311.919633 1817.851667 255267582 pstS Stress Phosphate limitation Bryantella formatexigens DSM 14469 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;species:Bryantella formatexigens; 549.2632342 728.3135 690.3079473 632.8155 652.7477 751.8569 710.5502 563.4479 569.6571044 88940385 nitro Organic Remediation Others Acidiphilium cryptum JF-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Acidiphilium;species:Acidiphilium cryptum; 2499.0386 3582.6714 3967.8256 2452.2131 1390.0563 3343.9867 2797.3476 3955.4342 4207.8754 2627.4209 1750.4566 3968.1956 160917619 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2181.2305 2695.815 2017.9061 3265.6817 2084.6768 2203.0014 2298.5074 1881.7181 2349.2876 2895.17 1791.6588 1488.7926 116754043 dnaK Stress Heat shock Methanosaeta thermophila PT superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanosarcinales;family:Methanosaetaceae;genus:Methanosaeta;species:Methanosaeta thermophila; 1360.6917 1125.8048 1534.5264 528.204 632.9440315 1604.9742 1506.947 2288.9664 1695.3745 1708.0425 1622.4221 91779182 benAB Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 9501.1071 13072.7149 11914.8176 10938.1448 7311.4416 10191.6333 14772.6897 6756.4234 10311.2424 9811.7247 13864.6707 7025.2773 5911742 Xamo Organic Remediation Other Hydrocarbons Rhodococcus sp. AD45 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 1367.9989 3270.8355 2581.5002 3021.5644 2184.4229 3568.9891 2631.6373 2334.3211 3550.7938 3682.5052 1480.6844 3344.3487 76803723 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 1032.5676 754.6160021 1093.992275 1122.2718 847.0282074 723.0276892 505.3319615 718.6229 981.5197 194472638 amyA Carbon cycling Carbon degradation Starch Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 829.3772 1382.7839 854.5437 1263.8021 960.1867 1603.2692 1692.065 739.5226 1294.8608 1176.084 1219.1045 916.7167 315647384 sir Sulphur sulfite reductase Paenibacillus vortex V453 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus;species:Paenibacillus vortex; 502.545435 529.0887 184199856 pimF Organic Remediation Aromatics Aromatic carboxylic acid Kocuria rhizophila DC2201 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Kocuria;species:Kocuria rhizophila; 8999.1288 5738.8136 7257.3842 8470.7685 8008.0149 6420.0165 5684.4842 5259.1612 6143.2064 7489.7509 6438.1853 7660.4533 162448335 pcpB Organic Remediation Herbicides related compound Sorangium cellulosum 'So ce 56' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Polyangiaceae;genus:Sorangium;species:Sorangium cellulosum; 2462.6237 1792.559 2392.6759 2762.147 2228.7692 2019.7719 1846.0299 1471.9603 2085.8352 2378.4649 3244.1623 2824.1261 90199375 scnABC Organic Remediation Others Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 2326.1918 3088.0436 3643.755 1372.1085 1867.8176 3410.4225 3088.3244 3305.1321 3898.1535 3535.3761 1365.8948 3066.4334 59714286 MFS_antibiotic Antibiotic resistance transporter Vibrio fischeri ES114 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Aliivibrio;species:Aliivibrio fischeri; 898.7416 1146.1546 927.9681 1121.3342 1277.1712 1381.4824 1286.8066 1076.094 1275.7216 1261.9763 1085.599654 1355.5888 213401745 glnA_fungi Fungi function nitrogen Schizosaccharomyces japonicus yFS275 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Schizosaccharomycetes;order:Schizosaccharomycetales;family:Schizosaccharomycetaceae;genus:Schizosaccharomyces;species:Schizosaccharomyces japonicus; 1155.688 3587.3988 2000.1389 1304.6892 2830.488 2835.3084 2664.9239 1294.4067 2749.7081 3195.8044 2659.132 109290304 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 966.1045 758.6917 683.603 698.6138126 1483.8491 817.1218 872.2764 1215.969618 842.5909 939.2659 674.8190769 27351572 nmoA Organic Remediation Aromatics Nitoaromatics Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 3267.6078 1286.0934 1674.8033 2348.742 1325.1957 1667.8804 1879.8556 2398.2316 1802.603 2366.2488 982.7503363 1029.1846 144899359 oxyR Stress Oxygen stress Magnetospirillum gryphiswaldense MSR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum gryphiswaldense; 4145.6771 1365.1609 2518.7769 3069.8619 2332.3073 1675.3435 1968.7728 1790.234 2150.4286 1956.8533 2967.519 2490.1554 110168583 obgE Stress Radiation stress Trichodesmium erythraeum IMS101 superkingdom:Bacteria;phylum:Cyanobacteria;order:Oscillatoriales;genus:Trichodesmium;species:Trichodesmium erythraeum; 1088.6205 1129.4364 1367.0751 1049.6961 1311.428788 1256.388 1168.9997 1016.001937 893.7413 872.9819 1754.0843 1179.8285 149377778 pilin virulence pilin Marinobacter algicola DG893 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter algicola; 781.5627225 732.6877686 493.5234607 692.0692 288818644 sqr Sulphur sulfide oxidation Hydrogenobacter thermophilus TK-6 superkingdom:Bacteria;phylum:Aquificae;class:Aquificae;order:Aquificales;family:Aquificaceae;genus:Hydrogenobacter;species:Hydrogenobacter thermophilus; 1220.0421 918.4197 447.323272 939.9653 795.8075 738.2274 458.3514946 719.2964 720.4867 528.0279 1053.238516 710.0585 209518590 phn Organic Remediation Herbicides related compound Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 2117.1853 3822.6306 2613.0654 2315.1694 6803.0416 3655.7355 3111.8039 2974.2134 3612.1837 4297.9329 1277.772439 2700.6723 229917162 rubisco Carbon cycling Carbon fixation Exiguobacterium sp. AT1b superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;genus:Exiguobacterium; 3315.3462 1812.552 3294.0513 3135.3361 2184.7073 2270.2 1830.6369 1908.6138 2321.9009 2334.9828 3733.7357 3093.184 116695186 fnr Stress Oxygen stress Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 5177.8148 4379.7564 6012.6152 5112.1354 2614.3683 4361.4181 3447.7669 4516.9635 4456.1725 4953.6492 3603.6665 5525.8421 238925727 hly virulence hemolysin Eubacterium rectale ATCC 33656 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Eubacteriaceae;genus:Eubacterium;species:Eubacterium rectale; 1334.2435 1126.9771 1760.4845 1419.995 1918.9136 1689.2379 1195.0601 1185.8435 1401.8563 1308.1831 2377.2105 1400.9055 115371531 phenol_oxidase Carbon cycling Carbon degradation Lignin Coprinopsis cinerea okayama7#130 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis;species:Coprinopsis cinerea; 400.6743052 1222.6609 873.605 611.1973 1351.5622 813.7268 761.3593 494.1233432 1121.3616 962.5703 944.9778 56809455 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 2624.4224 2362.710682 2221.33098 2273.355356 2523.159371 2150.50481 2100.695027 2887.747222 2185.295991 2336.665864 3666.1725 2481.644273 170774454 atzC Organic Remediation Herbicides related compound Leptothrix cholodnii SP-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Leptothrix;species:Leptothrix cholodnii; 5462.7541 2219.957 4731.5121 4932.9581 2690.6804 3097.851 3252.4519 2828.2238 3047.2336 3877.5831 2827.1913 2944.8609 149360034 gyrB other category gyrB Marinobacter algicola DG893 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter algicola; 1600.2433 720.566 636.4514 670.5486 1169.2156 901.7146 888.2659 768.6618653 884.2591 940.9967 820.0272 1353678 CopA Metal Resistance Copper superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Proteus; 824.555 570.6257884 659.9203234 431.6494535 420.3964121 1322.1376 487.7876 418.4458539 579.4070392 271970099 sigma_24 Stress Sigma factors Streptosporangium roseum DSM 43021 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptosporangiaceae;genus:Streptosporangium;species:Streptosporangium roseum; 6079.1354 3566.9216 5292.6345 6480.9428 3097.5331 5004.2543 4557.3967 4806.1103 4645.9336 5500.6377 4673.5301 4201.3296 262273875 pilin virulence pilin Grimontia hollisae CIP 101886 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;species:Grimontia hollisae; 2575.7102 1988.412 2318.4082 2737.5599 2315.4902 2435.108 2196.6059 2332.3602 1660.3462 2205.9879 2838.3628 2415.7673 218529024 CopA Metal Resistance Copper Methylobacterium chloromethanicum CM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium chloromethanicum; 5373.3622 3925.8539 7029.1725 2609.5429 1451.3145 4618.6064 4553.9098 6543.0856 5293.7543 5167.7435 1594.1285 6832.552835 76788546 ArsC Metal Resistance Arsenic Streptococcus agalactiae A909 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus;species:Streptococcus agalactiae; 397.799777 642.8874 363.8389519 305.1432635 88687735 mnp Carbon cycling Carbon degradation Lignin Spongipellis sp. FERM P-18171 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Polyporaceae;genus:Spongipellis; 1238.619 877.8856 1101.2206 1427.6862 906.6244502 705.0992 862.4005 974.2245 845.4099 1017.7605 778.853546 803.4797 255020686 sigma_32 Stress Sigma factors Acidithiobacillus caldus ATCC 51756 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus;species:Acidithiobacillus caldus; 844.7169 521.9745913 563.3632848 1257.6109 555.0686489 1857.2593 719.7119167 643.4057 584.0946 716.5265 45201309 sulfate_transporter Fungi function Sulfur Ashbya gossypii ATCC 10895 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Eremothecium;species:Eremothecium gossypii; 413.9454914 416.8864763 333.7807851 524.0794472 285.0588424 622.4898626 525.1806 564.1737 121716016 chitin_synthase Fungi function major biomolecule Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 638.7721466 722.6813 1200.616476 1852.9913 1369.0634 662.0432 703.2696 648.0114 977.7399377 170089369 AceA_fungi Fungi function carbon degradation Laccaria bicolor S238N-H82 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Tricholomataceae;genus:Laccaria;species:Laccaria bicolor; 4639.8379 8270.8486 5617.3884 3600.5588 9900.6126 5158.6331 5364.4534 5964.0293 4916.1191 5986.3448 5847.4684 2981.9246 148499666 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 2467.7951 2729.7484 19561.54584 2582.2163 2468.5884 2852.9269 3218.1215 2879.4491 3345.8424 3334.0338 2445.8728 3152.7687 206676000 pcbC soil_benifit Rhodobacteraceae bacterium HTCC2083 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 1996.2812 4482.1811 3152.3204 2189.3576 4231.6735 2118.9321 2807.04 2650.1457 2457.5877 3187.6529 3431.4341 3222.7213 33568011 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Bordetella bronchiseptica RB50 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella bronchiseptica; 1289.2722 1846.5747 2823.6844 1320.7153 9261.16089 1508.9698 1230.3196 2193.5484 1924.7538 1498.973 1874.0152 1932.2788 154156187 alkH Organic Remediation Other Hydrocarbons Parvibaculum lavamentivorans DS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Parvibaculum;species:Parvibaculum lavamentivorans; 2136.4875 2687.698 2669.7985 2311.9778 1808.9103 2784.8758 2887.2169 2816.8095 3750.7478 3172.8126 1408.5865 3331.2206 145233743 alpha_galactosidase_fungi Fungi function carbon degradation superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 1283.060432 1236.87195 1319.75341 1287.6906 1873.8467 1307.1347 1565.6402 1220.1591 1069.893413 799.3389463 1291.4313 53803990 ppk Phosphorus Phosphorus utilization Methylococcus capsulatus str. Bath superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae;genus:Methylococcus;species:Methylococcus capsulatus; 1296.0824 1336.7832 1646.873 1291.6629 1963.7339 1671.5596 1132.6162 1624.2239 1179.5596 1084.4297 1967.7494 213975463 amyA Carbon cycling Carbon degradation Starch Salmonella enterica subsp. enterica serovar Typhi str. AG3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 1173.6873 812.6692 1233.4136 1527.9589 739.7679 715.9601 1194.7643 843.7208 1208.2545 767.501 171678197 protease_aspartate_fungi Fungi function carbon degradation Podospora anserina S mat+ superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Lasiosphaeriaceae;genus:Podospora;species:Podospora anserina; 633.1313 692.7235 886.4579 781.2931 900.9382 699.2812 437.5559175 876.7778249 471.9319704 1048.1454 901.4463 158422305 NiR Nitrogen Assimilatory N reduction Azorhizobium caulinodans ORS 571 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Azorhizobium;species:Azorhizobium caulinodans; 2313.364 1625.2964 1898.4222 622.5060573 927.6202 1561.1001 900.9171 1271.2333 2226.0957 1021.161478 229787174 pstB Stress Phosphate limitation Catonella morbi ATCC 51271 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Catonella;species:Catonella morbi; 3540.2028 1916.733565 3530.6087 4163.5955 3857.7346 2948.6471 1517.968159 1772.928645 2056.753451 1940.454921 4540.2176 2052.285742 160917424 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3452.5101 2993.2645 2122.6195 3650.48625 2366.733657 3027.87805 2400.74735 2066.393 2771.05485 2388.9949 3690.6836 2739.4044 134101896 endochitinase Carbon cycling Carbon degradation Chitin Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 1486.4986 1525.5897 996.8998 1384.3472 1037.371 1328.25295 1067.8438 1591.10055 1078.1265 1215.98725 2160.3164 1041.45445 229858323 katE Stress Oxygen stress Streptosporangium roseum DSM 43021 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptosporangiaceae;genus:Streptosporangium;species:Streptosporangium roseum; 7388.6769 6438.9279 6829.967 7179.544 11250.1334 7694.352 6573.4269 7039.9054 7493.6326 8305.192 7360.1054 7967.5361 151584753 P450 Energy process Energy process Halorubrum lacusprofundi ATCC 49239 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halorubrum;species:Halorubrum lacusprofundi; 2608.3909 2419.8877 2355.8619 2626.5415 3121.4979 2737.0007 1644.0736 1906.3866 2073.4408 2308.1498 3603.7866 3358.2733 66967805 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 594.2986 37137.50526 739.5655 613.8546 393.5674795 353.3810938 496.5943 147886204 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured bacterium superkingdom:Bacteria; 1922.2692 3099.2953 3558.1175 2432.0092 2603.3338 3580.9242 3367.5212 3508.8591 4009.5755 3995.1435 1892.0096 3331.3167 99030533 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 1019.920212 599.3093518 1035.8511 1240.0917 614.0717121 760.4170307 951.9398 70983560 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 860.661 2118.8066 1041.347 833.0013 2318.3151 609.0155843 1721.7271 556.2186044 827.6686 764.0643 1398.0637 811.266 158109521 atzA Organic Remediation Herbicides related compound Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 1582.7142 1551.5718 2349.3337 1482.9762 2739.7856 1831.5869 1489.2714 1152.6172 1729.2147 1322.8334 2237.6835 2080.1899 67516965 tftH Organic Remediation Aromatics Chlorinated aromatics Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 869.6875 770.6218 505.2872367 450.0859816 683.1408522 260906836 iro virulence Iron oxidation Brevibacterium linens BL2 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Brevibacteriaceae;genus:Brevibacterium;species:Brevibacterium linens; 2107.7827 701.2483 1065.9188 1979.0732 1003.2059 3078.220813 1184.7828 1146.6983 656.8952 619.6598 845.8577 91681941 fnr Stress Oxygen stress Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 4574.6912 5869.221 5810.8217 4888.8658 6839.3491 5207.7196 5517.558 4158.7617 5454.1718 4184.0575 8067.108639 4438.8581 163758644 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 1737.3871 1176.7242 1373.8617 999.5657 623.1089 640.6007 1178.9682 630.3104432 771.825 1343.5279 933.5388 88788138 cap virulence capsule Synechococcus sp. WH 7805 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 1922.8468 1095.1589 1490.0937 9295.160672 1232.6075 1537.6528 1461.6756 1395.4727 1440.3492 497.2852201 1383.5341 29840119 clpC Stress Protein stress Chlamydophila caviae GPIC superkingdom:Bacteria;phylum:Chlamydiae;class:Chlamydiae;order:Chlamydiales;family:Chlamydiaceae;genus:Chlamydophila;species:Chlamydophila caviae; 594.9736054 645.7416957 544.5843678 663.1397 1175.0344 830.058 56068751 SilA Metal Resistance Silver Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 1475.2826 2562.4132 1864.059 2022.1748 2784.7576 3165.0347 2168.0718 1987.8928 2173.4003 2282.9806 2325.99 2074.9761 254296512 cat_bac soil_benifit Burkholderia pseudomallei 406e superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia pseudomallei; 4409.971 2085.9563 2759.3472 4120.2429 2441.1729 2556.2689 2352.0734 2381.5519 2835.5491 3227.5506 2839.54 2593.8347 312211646 alpha_galactosidase_fungi Fungi function carbon degradation Leptosphaeria maculans superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Leptosphaeriaceae;genus:Leptosphaeria; 1344.4252 766.7851727 990.1535 1667.838 1232.8059 1070.3617 640.2812507 1076.6508 728.2566 1058.6687 1762.9494 1029.1571 260519174 katE Stress Oxygen stress Sanguibacter keddieii DSM 10542 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Sanguibacteraceae;genus:Sanguibacter;species:Sanguibacter keddieii; 2995.6709 3646.2822 3715.7691 2686.2079 3767.7527 1874.0677 3100.3452 1449.8256 2311.1373 2260.9604 3003.3637 2228.4306 146281382 iro virulence Iron oxidation Pseudomonas stutzeri A1501 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas stutzeri; 1655.6515 3034.3719 2980.042 2318.2787 3030.6059 2325.2242 1898.8388 3159.2151 2355.1936 2428.2338 2053.7673 4474.1502 124260167 ChrA Metal Resistance Chromium Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 1040.6672 658.3330148 713.2658699 862.8468893 926.1613473 1014.599 1031.8892 678.6533869 283480146 igaA soil_borne_pathogen regulation Erwinia pyrifoliae DSM 12163 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Erwinia;species:Erwinia pyrifoliae; 12402.9669 9900.6851 13278.3306 11174.2764 4781.3294 8276.9742 11070.9605 13206.0518 9968.4491 10030.2857 7416.8756 8841.6962 218279383 CopA Metal Resistance Copper Roseburia intestinalis L1-82 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Roseburia;species:Roseburia intestinalis; 4461.9136 3162.7404 4704.0034 5133.6954 1305.4019 1855.1929 2179.8365 3425.606 2704.219 2599.2939 4063.8276 226245939 akbF Organic Remediation Aromatics BTEX and related aromatics Rhodococcus opacus B4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus opacus; 394.1461711 16927.58388 467.9075 741.4682239 467.3357064 770.2602 1052.2607 650.197 860.3303 615.2758133 92393258 pimF Organic Remediation Aromatics Aromatic carboxylic acid Psychrobacter cryohalolentis K5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Psychrobacter;species:Psychrobacter cryohalolentis; 1360.6649 2184.3543 2081.1965 948.4851 3328.9532 1674.8949 1363.443 1427.9652 1679.1476 1363.8143 2429.2238 2858.4021 154246264 oxyR Stress Oxygen stress Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 4327.1474 3373.2857 3298.0206 4488.857 4511.8576 3849.5989 2878.3733 3340.3677 2880.8984 3487.5502 6655.9203 4188.2839 20515236 MATE_antibiotic Antibiotic resistance transporter Thermoanaerobacter tengcongensis MB4 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Caldanaerobacter;species:Caldanaerobacter subterraneus; 813.8629 522.8653 801.4601 797.7165 930.5719 752.1816 577.8701 730.6744 447.3644359 696.3733 1079.9059 847.9588 119698563 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 952.632 536.9713 882.5177 743.5153 796.4128621 458.1376567 840.5933 469.7724278 651.8883 213961811 CopA Metal Resistance Copper Capnocytophaga sputigena Capno superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Capnocytophaga;species:Capnocytophaga sputigena; 672.7739197 920.3693 725.8134869 922.3228 895.1539512 926.0485 544.1247 826.4918 752.6727 2302.8543 910.5783 163734694 ureC Nitrogen Ammonification Roseobacter litoralis Och 149 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter litoralis; 889.1778 463.8418 737.1083 836.2613 672.9308 510.0804642 636.9417 935.9871 468.7532 711.6378 872.2611955 696.433721 118670769 tfdA Organic Remediation Aromatics Chlorinated aromatics Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 1707.8629 3489.1792 2085.2821 1914.9003 3830.4708 2309.6248 4868.9625 1112.2616 2972.727 2082.4647 2435.6864 1294.3837 119867782 Catechol Organic Remediation Aromatics Other aromatics Mycobacterium sp. KMS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 4655.2984 2789.7404 3456.2247 5159.7206 4113.5556 3447.6786 16748.64077 4360.1647 3000.4049 3204.9162 4883.6013 3956.2759 111073759 endochitinase Carbon cycling Carbon degradation Chitin uncultured bacterium superkingdom:Bacteria; 838.9007 1676.3086 1429.6676 781.1698 1037.3141 1895.0664 1697.7543 1647.5125 1883.5398 2126.494 1896.6708 160898768 iro virulence Iron oxidation Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 3982.3806 3070.1148 3429.5012 3786.4753 3517.5626 3561.5308 2794.2392 3835.2751 3577.2835 3464.4245 2805.1607 3273.9429 78217941 ZntA Metal Resistance Zinc Desulfovibrio desulfuricans G20 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio alaskensis; 2906.1715 2329.3264 3326.7361 3365.1668 1039.1342 2056.5195 1783.8383 2855.1437 2529.683 2422.7846 1280.919662 2307.474 37681180 oxyR Stress Oxygen stress Vibrio vulnificus YJ016 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio vulnificus; 783.1432 2337.8129 1514.4328 1307.3877 1539.7039 2038.9159 2088.0747 1539.6393 2066.7892 2501.039 990.9428 2380.1868 108524633 mer Metal Resistance Mercury Plasmid QKH54 2308.703 5045.7333 4526.6798 2661.2236 4915.544 2871.1287 3608.3386 4451.6246 3150.1986 4235.1887 2886.436 3950.7692 283780188 sigma_38 Stress Sigma factors Pirellula staleyi DSM 6068 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Pirellula;species:Pirellula staleyi; 2121.0403 1819.22729 2293.218762 1741.2636 1495.2722 2231.110347 1840.519431 2074.272227 2314.53783 2137.43663 1331.7558 2042.824185 27354437 atzB Organic Remediation Herbicides related compound Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 2873.3027 4009.05 4003.2293 3389.7539 3716.6946 4021.0877 3802.4493 2875.3457 5879.002854 3344.4745 5261.9888 3314.7555 147829856 Catechol Organic Remediation Aromatics Other aromatics Clavibacter michiganensis subsp. michiganensis NCPPB 382 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Clavibacter;species:Clavibacter michiganensis; 5108.1549 5647.4623 5499.7931 4668.8835 6202.1381 5582.6139 5402.6952 4097.5989 5404.7104 4403.0539 5871.7813 4588.0188 145962227 phn Organic Remediation Herbicides related compound Vibrionales bacterium SWAT-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales; 2728.9592 1172.6591 1702.0358 3075.4231 1068.386926 935.3812 1244.99 960.6193 1694.5824 2079.9857 2156.7848 2445.8137 56692275 nifH Nitrogen Nitrogen fixation Heliobacterium modesticaldum superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Heliobacteriaceae;genus:Heliobacterium; 890.0979 1059.309844 1129.181689 995.6782125 872.9981 1140.6024 1152.905936 1111.213063 1250.059 968.34557 990.4702415 1118.260233 260910473 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Prevotella sp. oral taxon 472 str. F0295 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Prevotellaceae;genus:Prevotella;species:Prevotella sp. oral taxon 472; 428.6783 430.4836828 603.9304 457.241421 425.7989593 237885049 ahpC Stress Oxygen stress Micromonospora sp. ATCC 39149 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Micromonospora; 3458.6822 1775.433 3194.3395 3697.3592 2735.842 2347.2398 2203.3046 1575.0806 1973.3298 2392.758 2525.9708 2535.7194 222451881 amyA Carbon cycling Carbon degradation Starch Halorubrum lacusprofundi ATCC 49239 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halorubrum;species:Halorubrum lacusprofundi; 1860.1314 1459.1245 2116.8909 1573.6675 1906.2107 1562.7526 1587.101 2199.1648 1415.8234 1514.8629 2682.9236 2129.9697 225046890 pstB Stress Phosphate limitation Clostridium asparagiforme DSM 15981 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium asparagiforme; 2021.8294 1827.4863 2234.9079 1591.7894 2265.1526 1948.4304 1550.7518 2103.6257 1995.5094 1605.0208 2810.8306 2050.6379 49525512 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Candida glabrata CBS 138 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Nakaseomyces;species:Candida glabrata; 879.1086276 958.7842095 1102.6523 881.7531142 1103.080554 886.3928 254447663 sigma_70 Stress Sigma factors gamma proteobacterium HTCC5015 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 2428.9086 1300.9979 1394.453 2249.3117 1987.1489 1490.8278 1230.0978 1419.0807 2137.009 1585.7475 38232576 ureC Nitrogen Ammonification Yersinia aldovae superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia; 2158.5433 1067.9663 954.5027 1800.4027 1232.2371 1430.8381 1950.6613 2599.211 999.2341 1421.154 1993.3454 1578.9042 268312274 glnA Stress Nitrogen limitation Thermomonospora curvata DSM 43183 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Thermomonosporaceae;genus:Thermomonospora;species:Thermomonospora curvata; 2676.4927 1469.5224 1647.3673 2343.2767 917.7410188 1070.459 1390.1757 1818.510105 1560.1093 1283.370171 2423.7046 126320482 mauAB Organic Remediation Herbicides related compound Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 4213.94 4153.3849 4096.1947 5238.7417 6737.4985 4525.668 3733.6623 2654.4791 3700.1565 4837.7079 5508.3851 3375.3014 259419180 SMR_antibiotics Antibiotic resistance transporter Silicibacter sp. TrichCH4B superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 916.3782 526.332556 625.6514 428.4573019 382.980954 574.5027 600.7591774 167589855 MFS_antibiotic Antibiotic resistance transporter Burkholderia ubonensis Bu superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ubonensis; 3191.4601 1144.3961 1941.7774 3014.4965 1739.9735 1599.1413 1727.2672 1369.7316 1598.3506 1529.8036 2595.8824 1993.58 149182238 rubisco Carbon cycling Carbon fixation Bacillus sp. SG-1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 2078.4197 889.0481 1302.5053 1780.3084 1722.398 989.5529 1116.7528 1623.0861 1043.0225 1034.5157 2288.3435 1692.3334 2645002 dnaK Stress Heat shock Blastopirellula marina DSM 3645 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Blastopirellula;species:Blastopirellula marina; 2859.2257 1809.9143 2367.2027 1086.1726 807.3729 2141.7255 1804.978 2733.9678 2152.6885 2079.8406 2194.6216 62421700 nifH Nitrogen Nitrogen fixation Anabaena sp. PCC 9109 superkingdom:Bacteria;phylum:Cyanobacteria;order:Nostocales;family:Nostocaceae;genus:Anabaena; 1182.01195 1333.897986 1123.45148 978.106 1904.959333 1070.4049 1467.963567 1479.293 1133.822586 945.9657875 1060.9025 1297.0821 189204067 atzA Organic Remediation Herbicides related compound Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 1091.2533 1196.0162 879.9224 653.8709147 1724.6352 855.8885 1366.3106 607.2141863 956.0049 900.6635 1032.897607 593.4963815 190696549 P450 Energy process Energy process Rhizobium etli CIAT 652 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 8300.8508 2795.6529 3996.3521 5471.1065 4419.7711 2749.2648 3966.1868 3299.3826 3284.0798 3425.0069 7034.5 2618.4293 84687620 phtA Organic Remediation Aromatics Aromatic carboxylic acid Rhodobacterales bacterium HTCC2654 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Maritimibacter;species:Maritimibacter alkaliphilus; 741.8297581 438.2785437 1615.3515 211961226 gyrB other category gyrB Pseudovibrio sp. JE062 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pseudovibrio; 665.8428144 408.5528244 662.9602 571.4456642 535.1678099 573.9604 446.5839595 519.2176 78057472 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosospira; 2518.7841 2236.0763 2418.2509 2386.917 3658.1097 2510.0241 2567.989 2980.544 2246.3809 1792.3045 3711.6331 3002.6741 76557139 nasA Nitrogen Assimilatory N reduction Natronomonas pharaonis DSM 2160 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Natronomonas;species:Natronomonas pharaonis; 3956.5638 2446.9529 2960.1084 4464.7904 1952.908 2799.0244 2583.7835 3294.3593 3215.8403 3373.1946 2191.4282 2909.8435 72384130 phtA Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 411.6888525 866.2134 794.5974 681.9724 670.5153899 803.3403 485.0814017 502.9995923 664.1023 759.7539881 399.5138765 117613120 ArsC Metal Resistance Arsenic Shewanella sp. ANA-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella; 4397.8819 6293.2422 6845.8877 4012.6077 4594.578 6068.4241 5498.1045 6729.4308 7678.5828 6680.9203 2244.7628 8034.6323 90590062 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Flavobacterium johnsoniae UW101 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Flavobacterium;species:Flavobacterium johnsoniae; 5178.4192 5044.7649 4236.5008 6585.9617 2080.335 5895.7238 8234.0406 7839.1869 4236.9744 6630.2804 2314.4342 2713.7043 190996270 cytochrome Energy process Energy process Geobacter sp. M21 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 2027.2023 2240.8675 2082.9558 2134.7182 3088.5273 2248.3488 1659.4093 2516.2241 1909.3189 1862.5638 3855.4443 2070.8244 77378447 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 682.5756 537.5995045 589.1666162 556.0853 364.4839985 590.8185826 27378440 alkK Organic Remediation Others Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 3116.8034 1713.6358 2509.4425 3459.5017 2609.6094 2774.9448 2780.1423 5157.2553 2082.5852 2515.0641 3746.1564 2817.411 151563605 nbaC Organic Remediation Aromatics Nitoaromatics Ochrobactrum anthropi ATCC 49188 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum;species:Ochrobactrum anthropi; 2194.8105 890.5517 1284.4763 2366.8227 1121.1532 807.6395 1211.6575 12034.8605 866.343 1119.5817 2096.4349 1240.8001 72080402 sigma_70 Stress Sigma factors Mycoplasma hyopneumoniae 7448 superkingdom:Bacteria;phylum:Tenericutes;class:Mollicutes;order:Mycoplasmatales;family:Mycoplasmataceae;genus:Mycoplasma;species:Mycoplasma hyopneumoniae; 653.8305 611.0055 450.4638111 529.6916692 478.5827525 416.7488702 453.2954064 447.8653387 357.4826362 912.6465501 529.8059626 37726807 dsrA Sulphur sulfite reductase uncultured prokaryote 2406.8796 1670.7911 2371.2738 3179.7982 1613.9873 1744.6211 1575.734 1383.01 1960.4577 2184.9392 2388.2378 1207.5678 108762557 amyA Carbon cycling Carbon degradation Starch Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 1485.0882 472.278502 894.033 1086.1178 637.5132717 639.0064 417.1518489 667.6471 1126.0136 1162.2382 738.718 59479972 trzN Organic Remediation Herbicides related compound Vibrio fischeri ES114 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Aliivibrio;species:Aliivibrio fischeri; 931.6238 1951.4077 1915.5191 1793.006 943.8609131 2404.0588 1900.3988 1736.2611 2455.0366 2078.1321 1745.8347 169849562 chitin_deacetylase_fungi Fungi function carbon degradation Coprinopsis cinerea okayama7#130 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis;species:Coprinopsis cinerea; 576.1515 837.4662 1033.62994 557.2838 442.8939785 704.3215 848.8771 628.3207 905.8795 991.0782 915.6593 116671894 ppx Phosphorus Phosphorus utilization Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 3216.5248 1206.7964 1756.806 3050.0279 2158.0502 1383.3818 1816.2532 919.84 1689.1424 2217.6011 2743.3695 1662.6853 85069242 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 2395.276564 2507.140609 2382.047536 2117.374609 2577.42752 2638.259264 2661.762264 2765.6172 2324.176718 2822.294736 2142.562167 2608.609427 308751660 sped_bac soil_benifit Hydrogenobacter thermophilus TK-6 superkingdom:Bacteria;phylum:Aquificae;class:Aquificae;order:Aquificales;family:Aquificaceae;genus:Hydrogenobacter;species:Hydrogenobacter thermophilus; 574.9695 402.4737693 399.1754 338.3656788 261252156 pstB Stress Phosphate limitation Vibrio orientalis CIP 102891 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio orientalis; 1320.1396 1266.0875 1291.0045 1119.8411 1352.8766 1115.41 1112.3253 1323.8322 998.4187 1151.0711 1907.3853 1452.8001 119479235 nitrate_reductase_fungi Fungi function nitrogen Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 3008.2167 2554.2197 3118.3852 2664.4699 3906.0625 2669.9217 2242.6704 2234.6666 2309.2036 2417.5698 4448.1794 3086.9496 63257262 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas syringae pv. syringae B728a superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae; 1830.1908 2529.4992 3659.9811 1181.0006 1349.7166 2015.0158 2213.1804 3064.7413 2262.0254 2231.1795 1289.328272 3049.4328 51893150 MFS_antibiotic Antibiotic resistance transporter Symbiobacterium thermophilum IAM 14863 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XVIII. Incertae Sedis;genus:Symbiobacterium;species:Symbiobacterium thermophilum; 1281.7635 970.7916 997.6123 1423.7618 2170.3069 2285.5461 1003.9163 1308.8512 2137.2919 747.3572939 899.2903 33241312 sigma_70 Stress Sigma factors Prochlorococcus marinus subsp. marinus str. CCMP1375 superkingdom:Bacteria;phylum:Cyanobacteria;order:Prochlorales;family:Prochlorococcaceae;genus:Prochlorococcus;species:Prochlorococcus marinus; 376.2139509 488.4859 339.1912993 901.7345 709.3533 359.9709496 444.8263 13242054 phtA Organic Remediation Aromatics Aromatic carboxylic acid Arthrobacter keyseri superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 21202.1112 13913.3412 15820.4288 14822.4615 11312.0552 12622.6732 9275.3422 10328.2005 13805.7369 10353.9229 24469.1788 10283.991 71037796 pilin virulence pilin Psychrobacter arcticus 273-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Psychrobacter;species:Psychrobacter arcticus; 505.3499 545.7453 393.5581571 258577521 per_fun soil_benifit Uncinocarpus reesii 1704 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Onygenaceae;genus:Uncinocarpus;species:Uncinocarpus reesii; 2328.8648 4992.5332 3149.5434 2123.6917 5159.0982 3620.3789 2931.209 3504.8808 3320.2847 3403.1542 2099.9906 2025.2605 255265905 sigma_24 Stress Sigma factors Bryantella formatexigens DSM 14469 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;species:Bryantella formatexigens; 1645.9131 1506.9856 1725.0809 1293.4436 1980.6268 1237.6328 1139.3262 1874.3385 1291.8321 1417.0559 2546.0554 1773.5191 256379515 fnr Stress Oxygen stress Actinosynnema mirum DSM 43827 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinosynnemataceae;genus:Actinosynnema;species:Actinosynnema mirum; 6309.647 4513.9483 5247.3585 5652.2836 5542.915 5301.1815 4019.2481 5018.4556 8756.6685 4716.9986 5414.8814 5472.3821 213408365 glucoamylase_fungi Fungi function carbon degradation Schizosaccharomyces japonicus yFS275 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Schizosaccharomycetes;order:Schizosaccharomycetales;family:Schizosaccharomycetaceae;genus:Schizosaccharomyces;species:Schizosaccharomyces japonicus; 505.2319099 798.8053 975.047 657.5223 1075.5366 1049.285 789.5254 1135.9693 981.9106 904.028 119369948 gyrB other category gyrB uncultured bacterium superkingdom:Bacteria; 584.5500826 466.3119021 739.8033 606.8557561 606.3678 468.2388566 1162.7001 471.1631429 365.8016392 776.0426677 690.8333 84511170 BchY other category chlorophyllide reductase Loktanella vestfoldensis SKA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Loktanella;species:Loktanella vestfoldensis; 540.5022 666.5503 709.4542 402.9531819 867.4177 620.5513 768.8952 533.0358 539.602 651.5177 1066.6443 2384.0181 55794120 B_lactamase_A Antibiotic resistance Beta-lactamases Carnobacterium divergens superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Carnobacteriaceae;genus:Carnobacterium; 764.7544 631.2422748 784.9893861 720.4076 1236.7495 1005.1822 511.641 720.0441 935.4805 793.0294 219946586 fnr Stress Oxygen stress Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 3112.0887 2342.9354 2566.7281 3125.8574 1101.4163 2088.167 1777.5068 1642.9129 1992.3059 2021.7415 2060.1338 1621.5432 83756806 sigma_24 Stress Sigma factors Salinibacter ruber DSM 13855 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Rhodothermaceae;genus:Salinibacter;species:Salinibacter ruber; 587.4917727 576.1419 628.7025 668.4619 1003.6984 603.7644 640.0944 89053928 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Jannaschia sp. CCS1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Jannaschia; 2629.0498 4240.8626 2267.1565 3216.1925 1873.8657 4784.4417 3356.2918 2612.0415 8035.378 3273.467 1322.5784 4069.9111 225045394 glnA Stress Nitrogen limitation Clostridium asparagiforme DSM 15981 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium asparagiforme; 1001.9419 835.3846 547.3797968 349.5446308 698.1865 470.2093 1126.9701 579.4207715 108760026 sigma_24 Stress Sigma factors Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 1983.507 1508.1579 1942.7079 1925.4748 1312.4739 1638.4613 942.738 1306.5352 973.708428 1655.6048 1336.15222 1714.0443 85689747 ahpC Stress Oxygen stress Erythrobacter sp. NAP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 715.2967 964.9173 614.9039 1009.7404 969.8255 1498.092 988.798 829.5324 715.6019 861.3300019 575.8111 222880153 obgE Stress Radiation stress Campylobacter rectus RM3267 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Campylobacteraceae;genus:Campylobacter;species:Campylobacter rectus; 933.2492 572.0634 443.6913 477.7112 576.3501826 86356395 sigma_24 Stress Sigma factors Rhizobium etli CFN 42 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 1085.0341 1412.4103 1297.8381 1850.2069 2201.1262 1188.4565 1509.8949 2669.2705 1972.1766 1890.4687 1139.8954 1690.6032 254475423 ahpC Stress Oxygen stress Ruegeria sp. R11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 1477.6064 1442.8481 1816.4325 2104.4329 1530.2431 1741.9888 1111.0292 1405.4029 1415.7884 1522.3779 1305.7132 1287.3253 222452026 nitA Organic Remediation Aromatics Other aromatics Halorubrum lacusprofundi ATCC 49239 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halorubrum;species:Halorubrum lacusprofundi; 9142.7603 7030.73512 10048.63474 12759.44443 10672.65471 6863.569741 5573.002455 2089.5 15795.93453 5902.796078 13600.48289 13923.02358 196226735 pstC Stress Phosphate limitation Chthoniobacter flavus Ellin428 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Spartobacteria;genus:Chthoniobacter;species:Chthoniobacter flavus; 1612.91 1429.6382 1383.0831 2027.5076 1189.3317 1218.758 1110.536 1080.8026 1303.8538 1533.8682 2103.1138 1186.7496 71370771 glnA Stress Nitrogen limitation uncultured cyanobacterium superkingdom:Bacteria;phylum:Cyanobacteria; 673.7775 655.4898 1220.5753 577.8575 697.8057 654.4124 801.7689 1370.4215 1048.2528 751.7142 1021.3022 58613942 mdlB Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas fluorescens superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1969.4837 923.391567 1024.3504 1362.1915 1133.77825 580.2548533 1035.4404 765.7931368 683.7693 1028.4747 1815.4672 114320787 sigma_24 Stress Sigma factors Alkalilimnicola ehrlichii MLHE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Alkalilimnicola;species:Alkalilimnicola ehrlichii; 1317.2114 1973.07 1393.915 1308.141 2054.8724 1284.1618 1013.5552 1229.2615 1663.3982 1232.5304 1178.88718 1225.104 213926291 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas syringae pv. tomato T1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 4069.207 4599.6802 3415.0925 2560.5057 4587.2976 3062.7785 2571.0745 2295.7568 3001.7795 2894.6229 3446.2092 2211.2377 50592000 BchY other category chlorophyllide reductase Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 5654.3658 3270.4405 5725.1842 6188.487 4919.6203 4537.7078 5123.1886 2542.9866 4233.8059 4436.6649 4326.8311 4243.1721 51244650 dsrA Sulphur sulfite reductase Desulfotalea psychrophila LSv54 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobulbaceae;genus:Desulfotalea;species:Desulfotalea psychrophila; 673.2939 799.812 460.5978656 528.5319015 794.8071 632.6535294 543.8087 667.3559 718.4494 637.7852 238582303 metalloprotease_fungi Fungi function carbon degradation Moniliophthora perniciosa FA553 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Marasmiaceae;genus:Moniliophthora;species:Moniliophthora perniciosa; 1335.439 759.3544 1260.0645 1483.5652 838.8442287 1094.4114 1039.9367 1215.39 777.7296 1224.9149 1057.3771 258404985 sigma_32 Stress Sigma factors Desulfohalobium retbaense DSM 5692 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfohalobiaceae;genus:Desulfohalobium;species:Desulfohalobium retbaense; 3336.3946 4009.6871 3229.4524 4013.2926 9727.6069 7893.8689 2998.9713 2679.9949 3806.4414 4306.4976 4935.062 4849.6613 254270048 ureC Nitrogen Ammonification Methylobacterium extorquens DM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 1276.4175 1843.5419 1815.7491 1313.1269 1381.0126 1573.0874 1594.5452 2625.4409 1937.8239 2067.524 2050.1847 126348275 nagG Organic Remediation Aromatics Aromatic carboxylic acid Streptomyces ambofaciens ATCC 23877 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces ambofaciens; 10692.0415 12499.6567 15862.1135 9176.3555 8249.6163 13863.9255 10749.1862 14370.7734 15516.057 14727.14 5268.0189 7714.223919 56696913 alkK Organic Remediation Others Silicibacter pomeroyi DSS-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria pomeroyi; 982.0218 1098.3497 1491.6415 1138.0389 802.9127 951.4385 1089.1867 1667.76379 1160.6581 209694003 CysJ Sulphur sulfite reductase Aliivibrio salmonicida LFI1238 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Aliivibrio;species:Aliivibrio salmonicida; 1489.9104 1209.5871 1638.6436 1347.4118 1586.3443 1276.579 1400.9851 1658.0675 1096.293 1082.4645 2041.1303 1773.7113 167350382 CysJ Sulphur sulfite reductase Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 2182.4797 2942.651 4173.6902 3000.2785 1412.4475 3999.775 4085.2822 1887.0561 3237.2511 2828.2718 2453.1763 1780.399 166366994 mer Metal Resistance Mercury Microcystis aeruginosa NIES-843 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Microcystis;species:Microcystis aeruginosa; 2763.534 2082.5031 2811.6748 2784.789 3207.5553 2355.1218 2233.391 2810.0795 2141.1793 1985.0597 4576.4467 3188.1982 113945200 TerC Metal Resistance Tellurium Salinispora tropica CNB-440 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora tropica; 4489.8797 7539.324 4006.3698 6491.1612 5645.3155 6937.0853 6256.298 3866.7946 7517.5479 6772.6303 3571.0651 6722.8086 154162660 trzE Organic Remediation Herbicides related compound Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 5568.3051 4210.102 3353.7359 4289.7224 3706.1721 3560.6285 3092.3046 3090.947 2801.8837 4937.5248 3889.9196 3675.3807 74056239 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Thiobacillus denitrificans ATCC 25259 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Hydrogenophilales;family:Hydrogenophilaceae;genus:Thiobacillus;species:Thiobacillus denitrificans; 3100.4429 2201.493 3441.1182 2558.136 1331.8505 2069.6661 2541.9057 3874.384 2326.8051 2652.1546 1915.3375 2359.0115 296423030 sir Sulphur sulfite reductase Tuber melanosporum Mel28 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Pezizomycetes;order:Pezizales;family:Tuberaceae;genus:Tuber;species:Tuber melanosporum; 4541.7955 3519.8378 4632.7454 4035.4415 4729.4941 3920.0131 4190.2577 5361.9022 3550.0017 3903.9694 5989.2135 4728.13 118471613 fnr Stress Oxygen stress Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 2218.0887 1409.2247 2463.3378 2187.8098 2133.0359 2383.261 1170.1563 2545.7353 2412.7571 1694.4072 1499.1605 46578391 phenol_oxidase Carbon cycling Carbon degradation Lignin Trametes hirsuta superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Trametes; 4047.40285 2451.8354 3450.8015 3917.986193 1554.00885 3152.11245 2004.54845 2385.01375 2280.10455 2565.53645 2272.8716 2007.5389 302406973 chitin_synthase Fungi function major biomolecule Verticillium albo-atrum VaMs.102 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Plectosphaerellaceae;genus:Verticilium;species:Verticillium albo-atrum; 7113.0462 4736.8665 4076.2175 5930.7406 3761.989 5119.5074 4229.1762 3528.7949 3025.8462 5060.032 3739.7899 3314.8791 302506697 p450aro Fungi function organic remediation Arthroderma benhamiae CBS 112371 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma;species:Arthroderma benhamiae; 1289.105001 795.5432 846.3871 862.9038374 493.4491939 728.2906 794.1613 683.2197565 589.1569739 161788151 pstC Stress Phosphate limitation Gluconacetobacter diazotrophicus PAl 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter;species:Gluconacetobacter diazotrophicus; 844.3676 1190.3203 1055.0432 1301.4703 1279.1216 1626.1801 949.8465 1005.6061 759.2181 947.3141 1083.3999 161394922 pstB Stress Phosphate limitation Roseobacter litoralis Och 149 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter litoralis; 1715.0357 1246.1327 1903.0296 1247.5843 1247.0635 1048.7199 1205.2227 2841.4538 1630.059 1587.255 2537.9831 1850.4614 108802398 akbF Organic Remediation Aromatics BTEX and related aromatics Mycobacterium sp. MCS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 3930.9484 17291.38474 1386.9942 3454.3651 3203.7444 2823.6275 1962.5904 1698.2536 2667.4317 2319.2939 4753.2197 2706.948 153010531 CadA Metal Resistance Cadmium Ochrobactrum anthropi ATCC 49188 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum;species:Ochrobactrum anthropi; 1909.933867 3102.4363 2372.16795 2070.0065 1941.9968 2708.498967 1968.898967 2311.6195 2389.1619 3108.14775 1241.73565 2872.5601 117993535 alkB Organic Remediation Other Hydrocarbons Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 1720.7176 1288.6928 1850.2804 1839.5913 810.8031245 1128.437 899.4723 1479.9531 1419.155 1272.6849 1533.6826 1385.8 123441628 cellobiase Carbon cycling Carbon degradation Cellulose Yersinia enterocolitica subsp. enterocolitica 8081 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia enterocolitica; 921.2138 699.0184 966.1197 1044.628 800.0118 635.4162 578.9868668 677.5487 675.4139 1052.061311 247543099 katE Stress Oxygen stress Paenibacillus sp. JDR-2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 1429.6128 1517.3962 1641.6969 1305.5385 2306.1052 1407.7756 1657.3332 1185.1293 1288.8616 1240.6484 2233.7836 1656.492 229809346 pstB Stress Phosphate limitation Collinsella intestinalis DSM 13280 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Coriobacteriales;family:Coriobacteriaceae;genus:Collinsella;species:Collinsella intestinalis; 926.3852 1780.80839 1285.3341 572.0420239 2085.2266 1005.32425 1037.83195 958.94285 1005.111 917.27915 1364.5254 763.1753 116096846 ara Carbon cycling Carbon degradation Hemicellulose Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Leuconostocaceae;genus:Leuconostoc;species:Leuconostoc mesenteroides; 716.2410843 683.6508 1014.1582 887.0243 643.24 509.4043 858.9192 698.0509 511.4344418 684.1868 146339315 fnr Stress Oxygen stress Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2096.7682 3982.0358 2666.2509 3108.1876 2946.0654 3104.9254 6742.5554 1995.4014 3291.372 1982.5696 2011.916202 2003.275 94426188 mer Metal Resistance Mercury Oceanobacter sp. RED65 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Oceanospirillaceae;genus:Bermanella; 997.3749 1591.749 1176.146442 1227.5996 1582.106 1916.5374 642.7767355 1548.8309 1429.004 880.7654 126358780 TerC Metal Resistance Tellurium Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 742.8732 830.7127 627.1191369 758.9799 786.5553 426.7595944 718.3345 491.6392 451.7677209 408.2899703 738.2759946 824.3254 302551612 sid_bac soil_benifit Streptomyces viridochromogenes DSM 40736 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces viridochromogenes; 9073.4631 3608.6917 5894.0603 9566.3925 5240.7569 3418.9925 4832.2234 2193.972 4406.4082 4770.6981 9086.4414 3321.0312 260221066 fnr Stress Oxygen stress Curvibacter putative symbiont of Hydra magnipapillata superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Curvibacter; 1759.8593 503.4966 902.7276 1689.0144 1534.945 936.5826 970.278 1068.081 1086.473 978.3485 1576.6867 752.313 145701164 tre_arc soil_benifit Metallosphaera sedula DSM 5348 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Sulfolobales;family:Sulfolobaceae;genus:Metallosphaera;species:Metallosphaera sedula; 728.1648 956.7070607 1110.9039 584.253349 1125.2674 466.7524154 626.1827 970.0001 678.3059 515.8453 1020.444936 1145.4976 227069575 NiR Nitrogen Assimilatory N reduction uncultured archaeon superkingdom:Archaea; 1793.7221 2838.7355 1963.1504 1867.168452 2168.70545 3405.0981 2349.06245 1851.6148 2369.276021 2253.098689 2154.17805 1785.592961 4827073 HcaB Organic Remediation Aromatics Aromatic carboxylic acid Rhodococcus sp. NCIMB12038 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 2427.3236 1903.4702 2653.0926 2504.7568 2352.8215 2601.9005 2589.2089 2090.3716 1655.0343 1523.0367 3039.8331 2196.9011 146339210 cat_bac soil_benifit Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 3569.2703 2660.3525 3829.4097 3768.2713 817.7233429 1605.1088 1534.0053 3277.135 2397.7588 2441.734 2234.0479 2800.7125 159897670 glnA Stress Nitrogen limitation Herpetosiphon aurantiacus ATCC 23779 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Herpetosiphonales;family:Herpetosiphonaceae;genus:Herpetosiphon;species:Herpetosiphon aurantiacus; 578.5726759 609.6494 496.18914 546.6774 261.4479585 384.8515979 774.7213146 466.9257494 45386221 narG Nitrogen Denitrification unidentified bacterium superkingdom:Bacteria; 7902.498825 6429.7277 6580.4403 4825.8983 7609.4665 4618.2474 5850.1258 3329.9822 4914.8726 4273.5007 6908.6111 10512.4699 89513036 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 910.2223429 1204.712129 891.25955 1001.747925 1686.4033 979.3053333 1215.58146 1029.985838 902.29866 921.0832111 4013.473837 809.000125 46115786 ABC_multidrug_fungi Fungi function metal resistance Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 4953.8044 9529.1504 7730.8044 4265.0257 9295.4622 5052.6229 6020.9748 5028.0543 4390.9151 4364.9875 7660.7013 5095.0446 116633904 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3298.7573 1275.5043 1850.6584 3520.9077 1982.6176 1496.5411 1892.4843 1800.6558 1362.4712 1769.6924 3004.1806 2182.8941 44662911 TerD Metal Resistance Tellurium symbiont bacterium of Paederus fuscipes superkingdom:Bacteria; 502.8140825 715.0357 817.1045 596.1682271 674.1741 641.1458 790.607 83361963 ureC Nitrogen Ammonification Rhodobacter sphaeroides ATCC 17025 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 602.3579 1140.8665 834.1303 701.4913 676.2866 880.0728 1259.0295 1198.3109 848.84635 1172.868 897.4502 316911534 cat_bac soil_benifit Eggerthella sp. 1_3_56FAA superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Coriobacteriales;family:Coriobacteriaceae;genus:Eggerthella; 2228.942 3724.4195 1849.6116 2215.9856 3013.5423 2088.9148 4924.9946 1574.9474 2918.3614 1899.5806 2538.8961 1644.2016 154496549 ArsC Metal Resistance Arsenic Bacteroides capillosus ATCC 29799 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;genus:Pseudoflavonifractor;species:Pseudoflavonifractor capillosus; 1123.8534 1461.5583 2203.0665 547.7366 1016.8757 1424.7509 1405.5158 2361.4104 1619.4934 1628.5597 1653.1962 126665417 fnr Stress Oxygen stress Marinobacter sp. ELB17 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter; 947.8635 721.9822368 1223.7586 89056702 pimF Organic Remediation Aromatics Aromatic carboxylic acid Jannaschia sp. CCS1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Jannaschia; 1033.4407 879.3637 1054.687 547.63992 1125.3111 1021.14275 1118.21085 1063.32655 1199.82385 950.512 19887267 dsrA Sulphur sulfite reductase Methanopyrus kandleri AV19 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanopyri;order:Methanopyrales;family:Methanopyraceae;genus:Methanopyrus;species:Methanopyrus kandleri; 1785.9851 668.449 1082.4211 2117.4319 939.253754 1052.8329 2413.9209 1438.0118 987.8647 1006.4321 705.1460696 857.5852 149380531 DNA_polymerase_type_I Bacteria phage REPLICATION Enterobacteria phage Phi1 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 416.3498865 563.514 501.5832 372.969345 581.9808888 530.2154 450.2867 522.372 632.5139 376.1417692 666.4171 32895106 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 4285.4267 3225.8671 3343.7327 3487.2392 4716.2414 3519.9175 2730.1206 3654.4735 3012.0422 3194.2857 3958.4618 3154.1007 188581810 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Methylobacterium populi BJ001 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 4957.552 3871.1883 3948.3136 4801.2427 5176.4841 4912.4825 3323.1085 3683.8627 4223.5549 3726.5569 7086.8016 6110.5381 86158084 cytochrome Energy process Energy process Anaeromyxobacter dehalogenans 2CP-C superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter;species:Anaeromyxobacter dehalogenans; 8091.2398 6317.2874 8381.9844 8460.0982 8581.8063 7105.8221 7543.3034 5071.9807 7486.9112 7252.7207 8567.6541 7432.6199 91795344 sped_bac soil_benifit Chromohalobacter salexigens DSM 3043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Halomonadaceae;genus:Chromohalobacter;species:Chromohalobacter salexigens; 452.2008946 891.3163 371.6817796 502.1993023 727.4888 745.70245 488.3118 549.568 469.1915794 94310960 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 6200.6842 7827.586 6360.138 6063.2505 8308.7131 5051.0525 10784.308 4114.6417 6767.2981 4772.5517 4856.5976 3591.8056 260425528 glnA Stress Nitrogen limitation Citreicella sp. SE45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Citreicella; 749.4459145 1322.1038 1097.981913 943.3759 1625.1924 1077.436 1136.4587 952.212068 1025.7704 1081.024 1211.2965 1045.5673 133915046 gdh Nitrogen Ammonification Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 4052.2017 2651.8149 1977.8062 4305.0499 2935.1257 2335.2897 2318.2018 2513.6338 2611.9245 2503.4733 6157.9383 2276.9882 115511388 alkB Organic Remediation Other Hydrocarbons Mycobacterium sp. TY-6 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 1506.5127 1408.0524 2430.6967 2270.036 932.8833611 2370.6315 2882.4338 1441.6028 2532.3506 2815.9218 1908.5625 1471.7782 162283252 nitA Organic Remediation Aromatics Other aromatics Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 907.6203 448.8958548 837.5034 960.0047 852.4397 1082.4015 1422.985 787.4434 861.7767 664.3479 807.0584278 953.2722 166860802 iro virulence Iron oxidation Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 469.2600105 573.5229 15625040 sox Sulphur Sulphur oxidation Rhodovulum sulfidophilum superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodovulum; 1889.4675 1899.8003 2072.7927 2279.3229 2014.5265 2043.2981 1872.8702 1464.4475 2430.7719 2570.4274 2538.2474 1811.9834 148501358 vanA Carbon cycling Carbon degradation Others Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 3234.0002 3959.2776 3541.2953 3060.5613 3984.3274 2943.2479 2545.3467 5700.8219 3103.1835 3402.6182 5427.5663 3823.8686 222084400 phn Organic Remediation Herbicides related compound Agrobacterium radiobacter K84 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 1745.8225 2392.5039 3837.2465 2157.3739 2139.4698 1451.3283 2136.0202 4348.242 2146.5262 3101.2022 2527.0039 3340.4212 89344536 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rhodoferax ferrireducens T118 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Albidiferax;species:Albidiferax ferrireducens; 3908.3418 3964.9735 4743.9288 5907.0576 3436.4917 5113.9437 4017.9519 3294.6135 4413.7354 5988.6451 5478.2342 3761.0156 238695352 DNA_ligase Bacteria phage REPLICATION Enterobacteria phage JS10 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 2707.1452 1770.4379 544.4473524 2207.904 1407.7266 666.871 2176.7166 1320.2251 825.3737 1032.7626 1172.1604 831.274 146277933 katE Stress Oxygen stress Rhodobacter sphaeroides ATCC 17025 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 601.3908 975.9141 899.9796 843.4799 988.4175 1214.2861 944.7912 1109.5987 1076.6646 1222.4359 841.6282 209964768 glnA Stress Nitrogen limitation Rhodospirillum centenum SW superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum centenum; 5275.1184 4842.7572 5049.4325 7061.6905 3493.8632 4559.2299 4647.8739 3593.6617 5300.2777 5679.6136 6213.0508 3959.5442 160899852 nmoA Organic Remediation Aromatics Nitoaromatics Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 1524.1225 1693.3454 3243.7447 1497.5093 1611.5795 1424.2873 1541.461 3864.0106 1651.0037 2099.0915 1474.8224 3077.5017 50421641 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Debaryomyces hansenii CBS767 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Debaryomycetaceae;genus:Debaryomyces;species:Debaryomyces hansenii; 440.1923516 571.5801 480.4734072 482.3309 609.7755195 942.6348 398.5353749 482.6504 449.8516 690.4430136 557.9983796 224803011 hly virulence hemolysin Opitutaceae bacterium TAV2 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae; 2965.0856 1635.8255 1756.9369 3099.7088 1290.8221 2293.2177 2964.5033 3224.2393 1748.517 2373.2167 1738.3482 1449.5455 256720142 glx Carbon cycling Carbon degradation Lignin Nectria haematococca mpVI 77-13-4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Nectria;species:Nectria haematococca; 3462.9268 3272.8998 3212.005 2283.9253 5267.3003 3428.385 2396.8417 2745.6606 4480.9614 3108.7619 1036.973861 1123.1688 206577202 nhh Organic Remediation Aromatics Nitoaromatics Klebsiella pneumoniae 342 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella pneumoniae; 1916.1441 1180.73155 1483.5655 874.1212 1236.0669 1134.1129 1269.3413 3146.5662 1491.68125 1533.48295 1228.42725 170748992 fnr Stress Oxygen stress Methylobacterium radiotolerans JCM 2831 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium radiotolerans; 5769.803 7402.5581 7424.7192 8005.4088 6488.6925 8446.4589 8056.7108 7791.726 8442.3103 7620.2643 8259.5866 8283.49 259164694 glnA Stress Nitrogen limitation Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 1620.380942 2391.3826 2685.3703 1768.888858 3512.6711 1830.419371 1595.1875 2063.5122 1476.486691 1615.88575 2311.3831 3279.1063 302418666 pcbC soil_benifit Verticillium albo-atrum VaMs.102 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Plectosphaerellaceae;genus:Verticilium;species:Verticillium albo-atrum; 2032.4342 2326.0515 2760.583 2025.1859 2864.95645 2000.0595 2195.2238 1883.48535 1872.2345 1989.2304 4065.7317 2528.90125 149807582 phoB Stress Phosphate limitation Moritella sp. PE36 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Moritellaceae;genus:Moritella; 979.2413 899.626 630.2384015 563.3961139 1018.9498 465.5381 727.2597 581.8396 167661174 mer Metal Resistance Mercury Clostridium scindens ATCC 35704 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium scindens; 7055.247 19818.74944 4110.2544 4719.7151 5741.3076 5225.0689 3821.3293 4613.7008 5196.4507 4054.2698 7134.4904 4021.0651 88807961 proV Stress Osmotic stress Synechococcus sp. WH 7805 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 1796.234 1277.6068 2161.8616 1220.7371 1411.9545 1124.9222 1184.863 3217.2309 1527.1523 6775.546933 2196.8338 1349.1758 197789453 ppk Phosphorus Phosphorus utilization Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 2489.7166 601.3594 1122.9717 2063.9157 990.3513 887.9997 896.3983 1877.5179 768.0493 862.7869 2161.4455 975.395 219858708 TerC Metal Resistance Tellurium Arthrobacter chlorophenolicus A6 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter chlorophenolicus; 1089.1041 988.1531 674.9311 725.7964 927.8426 723.9669875 241776393 hrcA Stress Heat shock Allochromatium vinosum DSM 180 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Chromatiaceae;genus:Allochromatium;species:Allochromatium vinosum; 1692.6575 1076.096 2132.6808 2124.0752 911.0057 988.5957 910.2429 1209.4589 1224.6294 1071.365 1460.4797 961.9785 158108669 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 3485.3991 1823.0264 1966.2473 2587.2844 1673.2928 1240.8634 1596.4836 1032.325 1564.1493 1606.7739 2660.4365 1452.855 184200251 Catechol Organic Remediation Aromatics Other aromatics Kocuria rhizophila DC2201 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Kocuria;species:Kocuria rhizophila; 3647.6344 1606.5431 2185.1829 3193.5505 2387.9535 2717.7968 2741.912 2446.2251 2234.7785 2290.5068 15485.39304 2644.7267 126722028 pcaG Organic Remediation Aromatics Other aromatics Roseobacter sp. SK209-2-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 1043.582 1755.7839 939.8905 937.171 1111.0857 1538.6879 1040.5332 929.9107 1113.9761 1112.1337 1015.4719 1175.9559 89902441 oxyR Stress Oxygen stress Rhodoferax ferrireducens T118 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Rhodoferax;species:Rhodoferax ferrireducens; 2034.1468 2521.4968 1754.2762 1298.5801 3128.6457 1295.738 2152.285 1367.1655 1697.2733 1442.5713 2234.6725 1723.8354 78484688 obgE Stress Radiation stress Thiomicrospira crunogena XCL-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Thiotrichales;family:Piscirickettsiaceae;genus:Thiomicrospira;species:Thiomicrospira crunogena; 871.6889 1369.1111 1348.421 991.5775 1415.3483 1652.9091 1501.8351 1294.2251 1614.8338 1210.7 1182.6351 1480.3197 110334219 CopA Metal Resistance Copper Acidovorax sp. JS42 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax; 1766.2396 2009.6029 2288.9658 1790.8692 3194.7007 2038.2429 2473.3367 1690.8821 1892.16 1737.1199 2146.5022 2152.6967 219544850 amyA Carbon cycling Carbon degradation Starch Chloroflexus aggregans DSM 9485 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aggregans; 1075.7524 2055.6927 1052.1063 1943.3226 1795.5323 2303.7608 1338.3452 1933.7584 1514.4274 871.9767 148512427 ChrA Metal Resistance Chromium Pseudomonas putida F1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 2967.94665 1817.2413 2590.25295 3819.54795 2501.03765 1783.313 2466.04735 2152.7328 2942.62035 2684.8109 2052.86635 2446.2462 10956993 nagG Organic Remediation Aromatics Aromatic carboxylic acid Novosphingobium aromaticivorans superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium; 4479.295 2548.6512 2861.1236 3274.6125 3582.5749 2462.3883 2569.4916 2534.3563 2467.734 3236.8746 4317.7978 2410.0546 255008008 ahpF Stress Oxygen stress Bacteroides fragilis 3_1_12 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides fragilis; 1531.9535 3174.5146 2220.7319 1793.7183 1768.4507 2644.5858 2467.2001 2046.3362 2271.0067 3065.2351 1741.8558 2816.436 24461653 fnr Stress Oxygen stress Pseudomonas aeruginosa superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1589.2154 1021.1884 1523.65582 1262.5146 915.3079023 981.5662 905.0468 2670.7714 1218.8399 999.9109 1885.3788 1562.192 103422968 obgE Stress Radiation stress Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus delbrueckii; 3559.2095 1877.8321 2372.9894 3110.5983 3221.6612 2900.2037 2252.5577 2801.7639 2283.3197 2742.3683 2673.8903 2677.5471 187981025 katE Stress Oxygen stress Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 2152.2839 4080.867 2764.3924 2001.2495 5298.4508 2656.8649 3906.5645 1932.8102 3663.8468 1739.0964 2494.931 1871.7923 311235473 cat_bac soil_benifit Desulfovibrio vulgaris RCH1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 5669.0742 4883.3295 7550.4276 4201.8801 4843.9528 6005.2188 5223.3008 6937.5517 6935.7301 5640.7767 3749.9763 5687.2796 83846976 sigma_70 Stress Sigma factors Sulfitobacter sp. EE-36 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sulfitobacter; 1216.2811 2426.6158 1806.5165 1532.2873 1967.2414 1552.9862 1493.4466 2751.3738 1577.6387 2140.0724 2074.6206 2187.9339 117997788 pbrA Metal Resistance Lead Chloroflexus aggregans DSM 9485 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aggregans; 667.3703 1198.3226 748.1002 518.8075 1576.7698 1201.8873 728.0956 971.4768 1258.854 1168.0888 659.6471 9629187 coat_Necrovirus soil_borne_pathogen structural Tobacco necrosis virus A superkingdom:Viruses;family:Tombusviridae;genus:Necrovirus; 1345.8893 1599.917 1801.1951 1493.5781 2217.3366 1482.9608 1188.0747 1305.7726 1390.7782 1328.7182 2155.7036 2045.4882 149390246 cda Carbon cycling Carbon degradation Starch Geobacillus stearothermophilus superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 2318.0787 2587.367333 2367.7601 2662.301133 3114.242767 2311.344733 2632.730767 2477.1636 2146.7592 2350.437133 3158.594667 2755.7711 241216022 glnA Stress Nitrogen limitation Asticcacaulis excentricus CB 48 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Asticcacaulis;species:Asticcacaulis excentricus; 1015.6429 1312.5596 994.6898 924.5555 882.3578 735.2062 875.2243 2143.8119 751.2749 1064.2966 1464.684 1161.8253 218291098 gyrB other category gyrB Alicyclobacillus acidocaldarius LAA1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Alicyclobacillaceae;genus:Alicyclobacillus;species:Alicyclobacillus acidocaldarius; 4426.6807 3543.6409 4785.1192 4338.5129 4431.2227 4216.372 2791.7043 3422.3499 3295.3676 3892.5238 5312.1762 4684.6808 70930941 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1374.1777 1551.508 1300.7581 1193.6165 756.7283 955.8714 842.3 1060.8337 673.3927 864.8135691 717.474 84778373 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1608.7862 1105.8881 987.5509 1542.5331 1671.3589 1070.4215 1924.4519 1072.5233 977.3341 1002.4792 1312.6082 1612.933 153810913 dsrB Sulphur sulfite reductase Ruminococcus obeum ATCC 29174 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Ruminococcus;species:Ruminococcus obeum; 1661.5393 2655.6887 545.1307104 2131.3623 1294.1779 941.9321 1381.3251 1090.946 1425.6085 1148.9383 2298.626 1511.8766 302534761 pcbC soil_benifit Streptomyces sp. C superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 14890.6508 11879.4383 15338.7793 18315.5906 12872.899 15250.4332 11805.3303 11734.8622 14996.0019 15706.1808 16699.1895 16664.6307 154299814 chitin_synthase Fungi function major biomolecule Botryotinia fuckeliana B05.10 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Botryotinia;species:Botryotinia fuckeliana; 2882.1277 5346.2028 3061.1045 4221.4265 3014.8316 5470.023 4678.8779 3378.7987 5228.7299 5458.5514 2178.5991 5197.8312 77689349 CODH Carbon cycling Carbon fixation Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 3996.4711 3562.4107 4117.4805 4926.5477 3680.7663 4120.3825 3663.6595 4388.634 3703.1386 12255.38413 4196.858 3812.4433 145570146 hydrogenase Energy process Energy process Pseudomonas stutzeri A1501 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas stutzeri; 4424.9077 1533.7322 2171.0069 3331.5942 2836.7636 1971.7772 2196.7092 2572.8842 1987.6347 2479.1975 4205.1705 2565.7657 45421890 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2477.3723 3164.4097 3104.3256 2274.5836 2377.8102 1952.2592 2073.4501 6059.653 1956.7068 2462.8274 3915.0494 2740.8806 154685214 xylC Organic Remediation Aromatics BTEX and related aromatics Bacillus amyloliquefaciens FZB42 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus amyloliquefaciens; 3424.4164 2914.6939 2404.2057 3072.4781 2898.7613 21439.50226 2682.1866 2611.5936 2982.4888 3103.402 2151.0188 2647.0887 85687921 linC Organic Remediation Pesticides related compound Erythrobacter sp. NAP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 1698.4065 603.5256 1811.111 1499.2215 1020.6487 823.8222 811.4154 981.592 826.8881 961.4648 1276.7395 1447.4582 62120271 alkB Organic Remediation Other Hydrocarbons Mycobacterium ratisbonense superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 4068.5891 4063.6518 4476.097 5440.246 3927.4868 4142.9964 4305.2352 2750.3812 4550.2143 4952.633 3544.4218 2942.2243 260457752 hrcA Stress Heat shock Streptomyces flavogriseus ATCC 33331 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces flavogriseus; 712.2341 1481.8318 780.7704 782.4163 2067.9924 1307.374 1174.1843 1639.1001 1182.9029 1128.1241 1188.5622 149821035 linB Organic Remediation Pesticides related compound Plesiocystis pacifica SIR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Nannocystaceae;genus:Plesiocystis;species:Plesiocystis pacifica; 1614.092 3842.195803 1398.8148 2404.4635 1680.1561 1588.3428 1645.7139 1012.9339 1739.0814 1864.5514 2190.3231 1877.0747 227993794 sigma_24 Stress Sigma factors Meiothermus ruber DSM 1279 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Meiothermus;species:Meiothermus ruber; 1928.2197 1674.3208 2035.8915 1564.0245 1768.754 1930.767 1577.0301 2312.2913 1894.0122 1883.4004 2456.5157 2156.734 164507722 amyA Carbon cycling Carbon degradation Starch Streptomyces glaucescens superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 1294.67195 1410.9067 1180.98425 1610.5481 956.0346 1622.675 2054.46115 952.0434 1465.59925 1818.54565 1012.853162 889.85615 241462626 sigma_70 Stress Sigma factors Allochromatium vinosum DSM 180 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Chromatiaceae;genus:Allochromatium;species:Allochromatium vinosum; 727.1414563 1116.1334 1099.981843 881.178 89897111 TehB Metal Resistance Tellurium Desulfitobacterium hafniense Y51 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium;species:Desulfitobacterium hafniense; 2054.8594 2234.4835 1793.5619 2360.7684 3094.6323 2368.388 2786.8868 1052.297 2656.4118 2696.7534 5036.261051 1898.3599 224989215 pstB Stress Phosphate limitation Mycobacterium bovis BCG str. Tokyo 172 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium bovis; 2137.3068 1639.9328 2048.7589 2750.0247 1593.1319 2046.753 3495.6666 1479.251 2096.063 1903.9131 2147.6794 1689.1613 118568782 tfdA Organic Remediation Aromatics Chlorinated aromatics Mycobacterium ulcerans Agy99 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium ulcerans; 479.2939944 797.6457 717.6476 609.7917 464.9076825 826.0158 604.4410266 84494383 nasA Nitrogen Assimilatory N reduction Janibacter sp. HTCC2649 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Intrasporangiaceae;genus:Janibacter; 2815.4901 3846.5824 3273.2744 3389.7539 4721.4742 2838.0454 4121.1266 1767.9016 2942.1719 2823.7159 3288.5117 1866.7892 262402912 amyA Carbon cycling Carbon degradation Starch Vibrio sp. RC586 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 1332.5645 1521.2082 1348.9049 1266.1367 1635.2158 1441.9338 998.3967 1282.8624 1454.1174 1140.6161 1133.2895 218463775 benD Organic Remediation Aromatics Aromatic carboxylic acid Rhizobium etli Kim 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 2417.115 1998.0836 2741.6672 2228.8749 2219.7066 1836.1236 2067.3709 4696.8128 2133.6192 2438.4176 2884.514 2347.0094 91780664 vanA Carbon cycling Carbon degradation Others Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 721.9054 786.6489 586.4375236 1122.1264 593.2461 1166.8777 899.8921 820.4812 1661.054 773.616183 743.5517 39936617 ArsC Metal Resistance Arsenic Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 7618.2349 5627.3927 4920.4818 5967.7787 5415.6586 5039.94 4724.105 4469.9989 5489.5496 5253.5465 8469.8259 5782.28 128168922 rubisco Carbon cycling Carbon fixation Thermosynechococcus vulcanus superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Thermosynechococcus; 3623.38235 2881.7926 3539.36875 3817.84945 3342.54715 3003.78345 3133.0009 2303.2918 3220.37175 2761.195 3774.70965 3370.1449 117928634 gyrB other category gyrB Acidothermus cellulolyticus 11B superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Acidothermaceae;genus:Acidothermus;species:Acidothermus cellulolyticus; 1147.4137 788.4283484 1162.1061 1291.5622 787.8176 1104.373 145298955 fnr Stress Oxygen stress Aeromonas salmonicida subsp. salmonicida A449 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas;species:Aeromonas salmonicida; 3726.4685 1469.3058 2847.0639 3197.5228 1833.1596 1937.4674 1870.5877 1742.64 2111.428 2610.2804 1938.7134 2215.6595 119671177 xylC Organic Remediation Aromatics BTEX and related aromatics Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 915.5722 1290.2219 974.7707 1077.1186 1428.8664 953.7027 930.6828 1405.0761 848.7532 1279.2285 1532.2412 1095.4157 269925486 sigma_70 Stress Sigma factors Thermobaculum terrenum ATCC BAA-798 superkingdom:Bacteria;genus:Thermobaculum;species:Thermobaculum terrenum; 498.1664809 717.7499 622.97537 833.573487 746.9619 571.3894 477.8914241 835.252 983.3287 744.2907952 90954583 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 9781.1302 17622.9539 17190.6881 10985.0177 18779.4959 19220.6696 18432.0364 18793.3477 15783.901 18661.1695 13869.3315 15489.9381 169628702 obgE Stress Radiation stress Mycobacterium abscessus ATCC 19977 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium abscessus; 1307.5267 587.9542 912.8761 1040.7516 542.9092758 758.5491 875.5383 645.7471 992.5299 905.6621 114553406 sigma_32 Stress Sigma factors Mariprofundus ferrooxydans PV-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Zetaproteobacteria;order:Mariprofundales;family:Mariprofundaceae;genus:Mariprofundus;species:Mariprofundus ferrooxydans; 2257.002 2541.8977 3222.517 2196.5625 2649.7468 1875.8176 2144.9096 3871.8542 2406.5887 3218.5839 1701.062 2815.4473 17546436 Arylest Organic Remediation Aromatics Other aromatics Ralstonia solanacearum GMI1000 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 747.8834 1788.6725 1990.63 1301.7032 1612.1682 1659.9599 1366.7902 2673.8503 2285.3144 1632.1583 156534426 papC soil_borne_pathogen adherence Cronobacter sakazakii ATCC BAA-894 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Cronobacter;species:Cronobacter sakazakii; 4831.5033 1816.3366 3546.7621 3733.6987 3129.4989 2106.5483 3302.7832 2384.8564 5938.057 4311.5113 3823.2994 2865.2133 42522755 amyA Carbon cycling Carbon degradation Starch Bdellovibrio bacteriovorus HD100 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Bdellovibrionales;family:Bdellovibrionaceae;genus:Bdellovibrio;species:Bdellovibrio bacteriovorus; 741.7583 1378.0691 1081.537701 692.5195 983.7155 1416.0613 1311.1503 955.9349 1491.7628 1418.6863 865.3422 1195.0714 170653077 obgE Stress Radiation stress Methylobacterium radiotolerans JCM 2831 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium radiotolerans; 2005.8718 970.8171 1685.5626 1419.4334 1065.962 1357.2083 1089.4537 2359.3648 1278.6688 1203.1849 1619.7628 1374.4982 77698229 nosZ Nitrogen Denitrification Rhodopseudomonas palustris BisA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 3021.9982 4396.6658 3615.1268 4286.8048 4599.4696 4464.9156 3161.275 3198.0214 3538.7838 4453.6267 3675.0676 4230.1676 209978146 phospholipase_A2_fungi Fungi function carbon degradation Sporothrix schenckii superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Ophiostomatales;family:Ophiostomataceae;genus:Sporothrix; 1628.3302 2109.5045 2895.5095 1403.6539 1532.613 2448.9426 2150.8283 2017.286 2521.587 3028.0173 2101.1455 238500552 phenol_oxidase Carbon cycling Carbon degradation Lignin Aspergillus flavus NRRL3357 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus flavus; 784.558142 1049.7699 1021.9125 1092.9803 1287.1629 1257.1508 677.3284 1324.1953 1337.8687 808.4956 858.8485 124258499 hly virulence hemolysin Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 4749.9693 4941.5629 5579.6875 4771.8478 5881.6651 4797.2742 3457.8378 6977.7863 5059.3777 4230.3089 8159.5241 6038.2647 72161663 pimF Organic Remediation Aromatics Aromatic carboxylic acid Thermobifida fusca YX superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiopsaceae;genus:Thermobifida;species:Thermobifida fusca; 1221.6406 1291.0884 1098.7635 957.1282 1103.2743 919.8416 826.4184 565.1152938 988.6452 1066.0386 2172.0644 1186.4886 169823702 gyrB other category gyrB Finegoldia magna ATCC 29328 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XI. Incertae Sedis;genus:Finegoldia;species:Finegoldia magna; 721.4756 1830.0348 934.2201 954.964 953.0579 1865.2286 1372.3095 1168.5828 1905.8475 1768.5088 1582.1313 28868696 nitro Organic Remediation Others Pseudomonas syringae pv. tomato str. DC3000 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 1355.6277 1233.5717 733.7327469 764.9393 711.7276 658.5123767 657.9183412 803.8057 921.8251 61611864 akbF Organic Remediation Aromatics BTEX and related aromatics Delftia tsuruhatensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia; 2148.6437 2678.4979 1671.4302 2303.6086 4235.4655 2181.8233 3886.7555 1447.9615 2505.4649 2137.1021 2266.2649 1750.3526 120404898 obgE Stress Radiation stress Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 884.0332 960.674 748.8004885 2934.7086 1252.619 1221.1319 891.3030321 998.9895 1155.8615 1030.006727 1215.1481 268313180 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Thermomonospora curvata DSM 43183 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Thermomonosporaceae;genus:Thermomonospora;species:Thermomonospora curvata; 1833.1593 2760.9294 2620.466 1861.2334 2466.1047 2225.3909 1764.7748 2618.1178 2309.2502 2121.7259 3199.4525 2274.5301 89319578 gyrB other category gyrB Mycobacterium flavescens PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 4504.306 2610.3124 3981.3619 4162.6093 5290.2223 4410.8037 2755.9172 3034.7227 3845.6401 3196.4185 4503.8203 4498.3878 226364057 limEH Carbon cycling Carbon degradation Others Rhodococcus opacus B4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus opacus; 5827.3335 2766.5999 4753.4376 5308.1196 3789.3665 3482.6165 3230.9567 3264.2681 3760.7077 4158.196 6196.9062 4334.5334 160917631 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1133.2695 1598.7829 1488.349 1486.6335 1948.3706 2266.9987 1081.6015 1559.6644 1499.5202 849.4144 57640772 ZntA Metal Resistance Zinc Thermococcus kodakarensis KOD1 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Thermococcus;species:Thermococcus kodakarensis; 1500.4682 1539.6957 1780.9997 1729.9426 2387.1951 2139.5119 1465.3101 1237.0082 10262.077 991.1952565 2185.0617 1098.213427 302677430 pec_CDeg Fungi function carbon degradation Schizophyllum commune H4-8 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Schizophyllaceae;genus:Schizophyllum;species:Schizophyllum commune; 5692.6345 8604.7035 10322.2932 4991.6794 6984.674 5093.2891 5112.659 10653.4423 6872.4997 5999.5882 12600.8324 9164.8184 258565897 sulfate_transporter Fungi function Sulfur Uncinocarpus reesii 1704 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Onygenaceae;genus:Uncinocarpus;species:Uncinocarpus reesii; 813.0347764 2105.1211 1118.904301 959.7978248 2388.3896 1595.1479 1154.8799 1376.0621 1519.5339 1563.2583 1109.888526 1342.0487 220724977 katE Stress Oxygen stress Postia placenta Mad-698-R superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Postia;species:Postia placenta; 2773.25 1206.0233 1404.3835 1600.6517 1357.3763 691.6185576 736.4593609 733.9103068 1164.1636 1019.6607 2599.2218 156720203 chitin_synthase Fungi function major biomolecule Pleurotus ostreatus superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Pleurotaceae;genus:Pleurotus; 2955.4278 4466.1892 3993.3424 4379.5644 3988.9915 4258.9077 3742.5288 3977.6697 3259.5588 3373.2504 5757.7365 2799.765 158929995 ahpC Stress Oxygen stress uncultured bacterium pEAF66 superkingdom:Bacteria; 2110.6706 832.5221 1302.418 1585.694 907.6293038 910.2995 1064.4257 776.4286 1439.9367 1618.0744 1320.9928 1213.2805 27383298 linC Organic Remediation Pesticides related compound Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 2582.4666 2699.5231 1652.7179 2055.1081 2494.8663 1903.2175 1749.4276 1808.6567 2188.2177 1694.7767 2385.1626 1787.6085 38199160 katE Stress Oxygen stress Corynebacterium diphtheriae superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium; 6359.3062 3250.0142 4802.2031 6755.0988 4001.7323 4034.0847 3731.1618 18267.14277 5444.1188 4262.0663 5725.8798 5205.4115 187725342 cbdA Organic Remediation Aromatics Chlorinated aromatics Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 4982.6972 14146.4535 12026.8298 8649.2747 7731.9451 12796.6448 11255.3215 11045.536 14973.1118 15171.1739 5572.8112 15486.0518 187604879 SMR_antibiotics Antibiotic resistance transporter Exiguobacterium sp. AT1b superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;genus:Exiguobacterium; 1335.936 515.0808517 1007.5137 1081.7483 1092.9603 765.8517 932.5295 851.5356 640.5284 768.4527 1005.3452 199594053 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1326.0565 889.7489 765.1695 1233.9826 1784.7938 961.2705 1218.71165 2717.003248 1073.47275 1165.3921 943.24755 159043808 CopA Metal Resistance Copper Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 4724.3807 5560.7237 4104.8748 6084.6597 4473.256 5122.3342 5190.4845 4540.119 3874.3197 4598.6454 5270.8298 5250.7832 74486337 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas sp. 10c-1-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1389.3562 769.1279 516.1808 1545.1356 946.5359 442.4486255 676.514 634.6512 487.0187 587.7871 907.7935806 885.9287 84713005 gyrB other category gyrB Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 991.2229 1322.4351 1191.2782 1005.8503 2538.5301 958.1895 1737.1316 764.6148 1114.8032 859.102 1071.7856 906.8568 83846770 pimF Organic Remediation Aromatics Aromatic carboxylic acid Sulfitobacter sp. EE-36 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sulfitobacter; 12425.6541 10524.1401 9609.5531 11968.2809 11307.8083 9554.301 8075.8776 7845.9531 10339.7124 8912.4347 14733.7608 11104.1556 161394700 ureC Nitrogen Ammonification Roseobacter litoralis Och 149 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter litoralis; 3180.9158 2595.735 3404.784 3130.8433 2835.0321 3353.1549 4010.0145 2447.7502 3042.7721 3385.2097 3398.9048 3758.1181 91787067 fnr Stress Oxygen stress Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 1964.3795 3000.1327 2766.3552 2102.1865 3421.1913 2535.8685 1937.8491 2622.6933 2276.2604 2752.6303 2861.042 2709.0216 159177588 hrcA Stress Heat shock alpha proteobacterium BAL199 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 675.0804 2172.096 1530.7752 1392.8465 2492.3826 1775.2216 2262.4451 1283.997 1480.3002 1798.4237 2263.9105 1715.1566 254506599 endochitinase Carbon cycling Carbon degradation Chitin Vibrio parahaemolyticus 16 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio parahaemolyticus; 1792.0565 878.2934 1163.2025 2177.9065 794.4425 1448.5763 1894.3654 2021.7282 1095.6407 1511.1668 834.3745 1311.0685 121302629 linB Organic Remediation Pesticides related compound Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 2424.261 2008.0738 2870.2544 2032.6853 1538.5094 2442.975 2058.7912 3036.381 2415.2439 2538.5471 1790.1693 2951.4937 109452408 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 3420.4136 3404.0844 2147.4239 3532.6191 5231.5426 2428.5123 5449.7919 2659.5266 2493.0471 1973.1563 3106.5014 2709.6258 240009113 sox Sulphur Sulphur oxidation Methylobacterium extorquens AM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 10211.0981 6877.3737 10183.9646 11587.0376 4382.9517 8177.0363 8345.4738 10512.7867 8848.8233 9780.6187 5350.1831 6700.6857 85698131 fnr Stress Oxygen stress Nitrobacter sp. Nb-311A superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter; 1418.4103 1061.2 1062.1746 1053.5056 1233.804 1145.6578 650.1482782 884.5736 1025.1247 52546288 gyrB other category gyrB Burkholderia andropogonis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1918.4947 1297.001 1191.1037 1964.1566 659.9613226 1905.0123 2251.3533 1356.3806 1656.0477 1934.7884 1169.3495 1088.8654 229380198 sigma_70 Stress Sigma factors Oxalobacter formigenes OXCC13 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Oxalobacter;species:Oxalobacter formigenes; 1782.7748 476.967774 773.646 1422.7893 623.8434703 880.1925 1105.0188 1306.8378 753.8726 931.6951 734.0602299 210049984 dxnA Organic Remediation Aromatics Heterocyclic aromatics Terrabacter sp. YK1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Intrasporangiaceae;genus:Terrabacter; 2467.3115 1869.305656 3380.1251 2761.5854 4484.3283 1915.11621 2484.7495 1443.484839 1451.04975 1609.8726 5044.47 3203.9492 167945384 ppx Phosphorus Phosphorus utilization Endoriftia persephone 'Hot96_1+Hot96_2' superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;genus:Endoriftia;species:Endoriftia persephone; 2847.0426 2099.6163 1722.9145 2113.8979 2140.0386 1861.7138 19310.40811 1519.3767 2378.142 1569.3217 2575.918 1468.2764 1255221 RdRp_Nepovirus soil_borne_pathogen replication Tobacco ringspot virus superkingdom:Viruses;order:Picornavirales;family:Secoviridae;genus:Nepovirus; 1726.1039 18067.74813 2778.0304 904.8311 754.381 2025.8591 1566.7643 1915.017 2105.289 1788.9881 2160.0023 147849328 sped_bac soil_benifit Synechococcus sp. WH 7803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 3560.855 5099.2011 3717.82645 3780.14705 5700.335583 4242.79225 4323.48435 3422.992193 3892.0494 4081.79515 5806.637997 4447.501408 219848922 catechol_B Organic Remediation Aromatics Other aromatics Chloroflexus aggregans DSM 9485 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aggregans; 1548.5558 4203.2338 2160.0005 1863.7811 3340.1393 2379.6501 2628.1733 3116.6807 2629.4795 3441.8682 1243.1531 1859.4424 158443036 Al Metal Resistance Aluminum Faecalibacterium prausnitzii M21/2 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Faecalibacterium;species:Faecalibacterium prausnitzii; 943.2831 986.2865 1526.5297 771.1412 831.1658 902.7872 1594.3385 956.3777 1057.7419 657.0247934 1208.021 157679469 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 789.9265 1995.9939 1009.8836 594.6096 2069.6419 1237.4683 2573.711661 1214.2159 1073.1466 1146.2025 647.1987315 956.9524 133740357 ArsC Metal Resistance Arsenic Herminiimonas arsenicoxydans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Herminiimonas; 1177.3946 1092.4702 937.2007 1448.705 1945.7413 1200.287 1034.7407 826.2861 1145.1603 1322.7553 1813.4972 1285.8834 56479025 nosZ Nitrogen Denitrification Azoarcus sp. EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 688.4052 1408.3454 751.7932 728.0508 1053.1832 1058.7257 962.4209 491.8840404 1689.2589 1128.1352 796.2473573 1258.3363 77961546 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Yersinia mollaretii ATCC 43969 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia mollaretii; 2977.2284 1379.7384 1785.9432 2254.9413 1166.5233 1152.7409 1579.4389 1311.7763 1333.9663 2095.2726 2127.1864 1085.7619 46318035 pcpE Organic Remediation Herbicides related compound Ralstonia sp. SJ98 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 4062.7192 2874.695 3612.8441 4366.1408 4579.9981 3404.0212 3103.4651 3709.669 3589.9809 3734.0384 3416.4668 3090.6436 19909661 gyrB other category gyrB Zoogloea ramigera superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Zoogloea; 4963.2204 1857.89 3214.4767 5169.4048 2295.4689 2968.7783 3149.7819 3295.5253 2643.9358 3409.5972 2579.9541 3749.6315 148359519 catB Organic Remediation Aromatics BTEX and related aromatics Legionella pneumophila str. Corby superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Legionellales;family:Legionellaceae;genus:Legionella;species:Legionella pneumophila; 995.0109 874.1775 871.7585 1084.3098 1199.1148 1097.6719 780.8013 825.3419 883.7699 902.9191 1526.4512 966.7299 91691438 MFS_antibiotic Antibiotic resistance transporter Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 1753.6804 2464.4229 1517.5297 1247.6117 2893.8698 1671.081 7927.982038 2167.3305 2662.1664 1887.8111 1396.3739 163746356 pstB Stress Phosphate limitation Oceanibulbus indolifex HEL-45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 4653.3105 1623.2614 3061.3178 4437.9022 2508.6499 2410.6246 2681.0854 2290.3704 2699.7575 3032.1489 3155.7037 3021.5424 145297564 amyA Carbon cycling Carbon degradation Starch Aeromonas salmonicida subsp. salmonicida A449 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas;species:Aeromonas salmonicida; 694.7587 509.2035244 935.4568604 573.0811 687.3396 108757036 vanA Carbon cycling Carbon degradation Others Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 1636.3023 1852.1559 1659.3624 1569.5514 1158.39915 1493.81155 1196.73475 1419.7888 1497.9717 1822.06305 868.9938497 1892.5717 77385407 AceB Carbon cycling Carbon degradation Others Pseudomonas fluorescens Pf0-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 2154.3121 2694.8975 2856.6018 2153.6481 1976.816 2565.467 2395.2244 3261.5568 3610.5179 3344.2846 2475.6633 3569.9987 206566852 nhh Organic Remediation Aromatics Nitoaromatics Klebsiella pneumoniae 342 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella pneumoniae; 1324.7335 1767.5708 1503.0048 1355.0961 1609.911 1771.1087 1374.7985 887.2593 1767.7494 1910.8587 997.4774169 1741.8935 83951805 ArsC Metal Resistance Arsenic Roseovarius nubinhibens ISM superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius;species:Roseovarius nubinhibens; 2242.2668 687.0149 1837.7619 1850.2206 1031.3039 1072.1565 1156.176 797.3084 1494.5702 1616.0086 1821.0409 1516.7104 126015215 GcdB Organic Remediation Aromatics Aromatic carboxylic acid Staphylothermus marinus F1 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Desulfurococcales;family:Desulfurococcaceae;genus:Staphylothermus;species:Staphylothermus marinus; 1345.9296 1109.7874 1727.0292 2042.2051 1088.6186 1371.8106 2020.3774 1783.3709 1458.4818 1339.3375 1475.0386 1654.3635 124516202 ABC_transporter_II Bioleaching other category Leptospirillum sp. Group II UBA 1172.0754 1004.5466 1122.2447 1284.9648 1279.3136 1148.0746 984.0079 941.4461 933.0565 1018.1457 1567.0048 926.2881 3378393 phdJ Organic Remediation Aromatics Polycyclic aromatics Novosphingobium aromaticivorans superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium; 1329.5959 927.4041118 18958.3048 673.4617 669.513326 561.9164506 1568.9437 488.9446 765.1028 879.502 188533200 pstB Stress Phosphate limitation Erwinia tasmaniensis Et1/99 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Erwinia;species:Erwinia tasmaniensis; 3353.5208 2206.7217 2947.9679 3730.6716 2532.1787 2340.5095 2083.9568 3191.1462 2902.2393 3008.342 1972.2998 3677.2346 153898402 AmiE Organic Remediation Aromatics Other aromatics Methylobacterium extorquens PA1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 1093.1875 1215.7035 977.446 1054.9971 2034.2065 705.862 1284.8605 649.7937 1008.3902 892.6236 1161.7337 735.5595 254386883 amyA Carbon cycling Carbon degradation Starch Streptomyces sp. Mg1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 4123.178 3834.1457 4894.3107 2478.9096 2824.1176 2641.2356 2834.5456 5547.497 3399.4741 3025.9403 3640.8326 5360.1888 145960923 oxyR Stress Oxygen stress Vibrionales bacterium SWAT-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales; 1274.0668 1002.6607 579.9074 686.0131 1145.611 570.1636 613.6801 645.1064 920.0038 53804054 Mex Antibiotic resistance transporter Methylococcus capsulatus str. Bath superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae;genus:Methylococcus;species:Methylococcus capsulatus; 3571.2583 3872.1312 3997.806 3506.2239 3240.5069 4174.6439 3037.4195 3854.8114 3684.4537 4088.9417 4868.2495 4450.3521 257386425 pstB Stress Phosphate limitation Halomicrobium mukohataei DSM 12286 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halomicrobium;species:Halomicrobium mukohataei; 2024.1666 2846.0752 2708.8952 2412.7779 3830.0537 2020.5795 2314.9443 2869.1483 2228.6745 2646.8505 3348.8135 3255.6652 148655099 Catechol Organic Remediation Aromatics Other aromatics Roseiflexus sp. RS-1 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus; 1810.50949 1518.85525 1909.79775 1463.8682 1861.2197 1166.42595 1321.15805 2808.167 1846.55445 1263.5954 2591.2697 1473.8998 209496037 ahpC Stress Oxygen stress Arthrospira maxima CS-328 superkingdom:Bacteria;phylum:Cyanobacteria;order:Oscillatoriales;genus:Arthrospira;species:Arthrospira maxima; 379.0481819 624.4744 804.2953 375.2157357 1141.9707 705.5681 417.188162 513.7297 431.9518 91786039 xylC Organic Remediation Aromatics BTEX and related aromatics Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 5841.94115 6515.963 5996.24375 6476.4158 7141.60205 5288.87245 7038.22915 6208.66265 5635.40015 6176.3549 5994.39475 6920.90455 213584693 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 1179.9333 1082.0341 1678.7435 1574.8455 756.1632 1973.7813 1881.9776 1656.1792 1811.829 1236.93 1221.578897 1325.9132 146404455 sox Sulphur Sulphur oxidation Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 880.017 1571.6285 1296.2097 1132.1689 753.4000076 1672.3672 1523.0971 1186.0008 1901.9917 1843.7372 1244.1782 144774 mannanase Carbon cycling Carbon degradation Hemicellulose superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium; 1106.5527 1287.6352 834.6392 1131.7809 478.3103291 1482.0933 1752.192 976.137 1279.5192 1438.9087 1290.6017 789.8984 210159723 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Collinsella stercoris DSM 13279 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Coriobacteriales;family:Coriobacteriaceae;genus:Collinsella;species:Collinsella stercoris; 2298.9242 2323.554 1624.5549 2301.0746 2889.6797 1876.5206 2045.737652 1614.4316 1475.1165 1684.0123 2027.9889 2686.6516 114570211 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Maricaulis maris MCS10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Maricaulis;species:Maricaulis maris; 1458.8549 965.427 1958.4978 1021.8901 1509.198 1218.0102 1558.7695 1859.6883 1125.2756 1184.2801 2092.4228 1654.8441 255263885 glnA Stress Nitrogen limitation Thalassiobium sp. R2A62 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Thalassobium; 1595.7838 2756.4313 3072.2369 1585.0913 1161.8024 2708.2098 2356.65 3507.3824 2705.3257 2980.2919 914.2802229 2593.9033 226358224 pstB Stress Phosphate limitation Deinococcus deserti VCD115 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus deserti; 1747.4076 1112.9475 1238.2262 1603.9939 1376.4812 1014.0214 1142.7558 1459.2064 1198.9085 1162.0589 1142.994426 1552.7304 194336204 SMR_antibiotics Antibiotic resistance transporter Pelodictyon phaeoclathratiforme BU-1 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Pelodictyon;species:Pelodictyon phaeoclathratiforme; 740.7509 910.392 601.3435817 842.2853 188578082 ara Carbon cycling Carbon degradation Hemicellulose Xanthomonas oryzae pv. oryzae PXO99A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas oryzae; 2564.642 738.5585 875.9604 1896.4086 1002.4153 2020.7903 2217.8053 988.1909 1799.8753 771.3983604 110822274 ppx Phosphorus Phosphorus utilization Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1441.4198 1597.6106 1238.8659 1909.6952 1882.2837 1587.2361 944.08 2025.7347 1518.9398 1515.9684 944.5031712 1228.9216 260903946 katE Stress Oxygen stress Brevibacterium linens BL2 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Brevibacteriaceae;genus:Brevibacterium;species:Brevibacterium linens; 637.3625 1330.9089 900.30675 974.757 744.7685 1066.14405 988.2232 769.4081 948.09525 1165.2972 696.0887949 1103.5796 27657633 chnB Organic Remediation Other Hydrocarbons Rhodococcus sp. Phi2 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 1925.4661 2361.3739 2401.1233 2075.8736 1651.2997 2346.4172 1894.5604 2036.6891 2348.2741 2243.1387 3192.1971 2440.4443 37525248 proX Stress Osmotic stress Photorhabdus luminescens subsp. laumondii TTO1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Photorhabdus;species:Photorhabdus luminescens; 402.9443765 425.4240096 618.6135101 358.4773854 827.681 487.3585 701.4305 684.6779 672.6781 652.3415 121593559 nagG Organic Remediation Aromatics Aromatic carboxylic acid Acidovorax sp. JS42 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax; 1910.8115 1450.2939 1417.0183 1837.7695 1452.2406 1266.0837 834.8075 1178.8607 1270.0831 1077.9599 924.0635 283560134 sigma_24 Stress Sigma factors Rhodomicrobium vannielii ATCC 17100 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Hyphomicrobiaceae;genus:Rhodomicrobium;species:Rhodomicrobium vannielii; 1314.5786 861.4859 1523.52 1022.0134 1610.4419 1026.0163 806.1161 2550.9391 930.1676 936.5301 1500.5767 1543.31 169157906 cat_bac soil_benifit Clavibacter michiganensis subsp. sepedonicus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Clavibacter;species:Clavibacter michiganensis; 2507.2189 2358.596 3162.1636 3495.622 3100.2126 3244.5274 2642.8093 3473.6236 3554.6729 2508.2079 3111.2822 3020.4301 78193497 narI Stress Oxygen limitation Geobacter metallireducens GS-15 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter metallireducens; 4495.7093 3070.1403 4386.8245 4717.0851 1193.5407 2903.3146 2534.06 3223.4283 2755.7889 2322.1637 1754.3246 2158.5879 15964264 pstC Stress Phosphate limitation Sinorhizobium meliloti 1021 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium meliloti; 2048.6268 1782.7727 2146.4206 1333.728 1086.3245 1915.0181 1780.0302 2056.3222 1847.6844 1858.0414 1029.7426 1886.2205 224588352 obgE Stress Radiation stress uncultured bacterium BLR10 superkingdom:Bacteria; 3382.500302 4604.9811 7703.1503 7000.8187 1888.1612 2835.6075 3809.102 7050.9566 2733.216844 2726.941287 3692.6777 4777.7175 44982707 iron_permease_high_affinity Fungi function iron Ashbya gossypii ATCC 10895 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Eremothecium;species:Eremothecium gossypii; 2438.4858 2703.4988 2796.5537 2463.8149 1564.5219 2783.5596 2433.902 3108.5587 2962.9885 2146.9398 2114.8138 2453.0094 223490247 CopA Metal Resistance Copper Cyanobium sp. PCC 7001 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanobium; 5389.7362 3812.2412 5551.3501 5069.4129 5058.4799 3312.8776 3251.4998 3514.2698 3167.2992 3599.7395 6309.99 4644.3215 109452561 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1108.1645 1874.1878 1821.0415 886.9558 1055.0792 1725.3574 1614.0331 1737.3625 2162.9512 1825.3348 1724.7418 227846620 ahpC Stress Oxygen stress Halogeometricum borinquense DSM 11551 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halogeometricum;species:Halogeometricum borinquense; 1145.56 3085.1893 1557.2516 2026.946 1377.2586 2781.1965 2190.8249 1545.4009 2737.5583 3462.1577 3014.9371 190715232 nirK Nitrogen Denitrification nitrifying uncultured bacterium superkingdom:Bacteria; 3519.4231 3182.4149 3928.569 3355.8799 6432.8756 2863.7702 4234.2804 2950.9127 3311.979 3048.4519 3094.2969 3449.7033 154497135 atzA Organic Remediation Herbicides related compound Bacteroides capillosus ATCC 29799 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;genus:Pseudoflavonifractor;species:Pseudoflavonifractor capillosus; 1523.3837 1512.1845 1878.487 1250.0772 1828.8368 1558.9238 1120.1939 2301.7364 1495.8865 1339.036 1382.7841 2314.5462 145217893 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 19145.5369 31925.6694 29737.3481 21943.8869 30563.6625 24321.003 21410.0631 24116.9157 27335.627 31317.4691 18331.1809 31288.9776 33669028 ArsC Metal Resistance Arsenic Rhodococcus erythropolis superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 991.1424 1637.5458 1539.8042 1498.3038 937.587 1742.3477 1642.7889 1437.3945 1843.2345 1887.5096 717.7830098 1899.0602 223892151 sigma_24 Stress Sigma factors bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3; 1698.6349 5039.1582 2583.4485 2155.4973 4466.8666 2873.9554 4188.4454 2230.6238 3829.0869 1867.0304 3520.5894 1829.8492 260220988 pstB Stress Phosphate limitation Curvibacter putative symbiont of Hydra magnipapillata superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Curvibacter; 2283.78605 2618.11741 2646.369479 2325.637619 1635.03245 2512.854835 3211.006859 1993.98525 2558.553206 1908.96554 4360.7778 1897.3574 124363917 mcrA Carbon cycling Methane Methane production Methanocorpusculum labreanum Z superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanomicrobiales;family:Methanocorpusculaceae;genus:Methanocorpusculum;species:Methanocorpusculum labreanum; 3275.1702 3050.453 3273.9577 2959.227 4011.4965 2136.1019 2402.9783 2444.8331 3219.137 2681.8015 2393.6433 2356.7319 124007696 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Microscilla marina ATCC 23134 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Microscilla;species:Microscilla marina; 866.6653 809.5218 1034.0337 696.5328 1282.6126 795.3006 788.1882 694.3011 813.2938 850.4033 1286.95 707.0649 259169016 ahpC Stress Oxygen stress Lactobacillus antri DSM 16041 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus antri; 3528.0466 1063.3025 2242.8465 3393.2604 1714.4729 2050.1332 4197.487211 1760.3728 1794.938 2383.7355 1998.2224 2271.3991 3192685 terminase_large_subunit Bacteria phage REPLICATION Bacteriophage N15 superkingdom:Viruses;order:Caudovirales;family:Siphoviridae;genus:N15-like viruses; 464.4646527 901.5358 498.1389398 454.1544531 449.6874159 891.9249 481.1933 884.5503 590.694 652.3640208 506.8198 22796260 nirS Nitrogen Denitrification uncultured bacterium wA20 superkingdom:Bacteria; 1100.5081 1444.993 1340.8895 1489.099 1865.8648 1623.2657 1165.6963 1310.5175 1315.2698 1212.4308 2321.3773 1489.9598 170108658 phenol_oxidase Carbon cycling Carbon degradation Lignin Laccaria bicolor S238N-H82 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Tricholomataceae;genus:Laccaria;species:Laccaria bicolor; 730.1973216 675.6103 542.6718 730.8166452 916.5608 530.4696 837.46995 918.1262483 608.8298678 612.30665 1491.8823 28377119 amyA Carbon cycling Carbon degradation Starch Lactobacillus plantarum WCFS1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus plantarum; 4076.7157 3568.5653 3714.824 4966.1472 3562.1365 4609.1091 3989.3452 5008.7964 2868.4923 5056.9835 6199.645 4199.6268 158523504 dsrA Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 4286.1789 778.723 1752.7495 2668.8531 1947.1443 1354.5013 1875.5313 1030.6546 1917.8925 2664.8062 3227.3932 1868.2036 149235438 chitin_synthase Fungi function major biomolecule Lodderomyces elongisporus NRRL YB-4239 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Debaryomycetaceae;genus:Lodderomyces;species:Lodderomyces elongisporus; 386.1807729 970.2436 1005.6526 712.3381 872.6779 764.4574 1016.5095 827.7354 781.6325 606.9815026 94471123 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2083.60455 3868.31485 6350.36025 2723.0063 1573.7552 4330.43615 3414.0272 3882.282 5229.66185 4411.5962 1330.97505 4501.7591 260864159 sigma_24 Stress Sigma factors Ammonifex degensii KC4 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Ammonifex;species:Ammonifex degensii; 2998.6663 2103.146 2576.9784 2657.4294 3488.8389 2556.6578 1788.0708 2152.297 2092.114 2146.8058 3889.1509 3387.688 222524679 obgE Stress Radiation stress Chloroflexus sp. Y-400-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus; 1543.9754 3457.463 2006.5944 1733.9423 1076.5414 1945.8878 2394.1347 793.423 2667.0007 1431.6952 2220.2818 1083.5647 169759229 vanA Carbon cycling Carbon degradation Others Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1627.7124 1423.9933 1408.6871 1198.6019 2030.0544 1718.7467 1157.6327 1496.1365 1289.8052 1534.7838 2087.2095 1602.7711 56476030 fnr Stress Oxygen stress Aromatoleum aromaticum EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 1684.9877 648.2918562 1707.459 1634.101 1268.9996 1262.0864 1153.7443 1613.8506 844.7692 1236.4275 1227.8494 1605.1056 46395065 katE Stress Oxygen stress Paracoccidioides brasiliensis superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Paracoccidioides; 5526.4366 2705.2572 2302.1531 4613.7647 2139.3561 3745.7873 6110.4426 2896.2377 3429.1789 2944.9389 3193.9029 2912.5625 116750737 MFS_antibiotic Antibiotic resistance transporter Syntrophobacter fumaroxidans MPOB superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Syntrophobacterales;family:Syntrophobacteraceae;genus:Syntrophobacter;species:Syntrophobacter fumaroxidans; 4290.57795 4036.934388 4010.5935 3827.0063 4280.29525 4026.5617 4700.603336 3140.0783 4296.959637 3571.53865 4356.2492 3175.61935 149783087 nirK Nitrogen Denitrification nitrifying uncultured bacterium superkingdom:Bacteria; 679.1504 704.4339 763.107389 616.5119 1844.4215 475.1577877 1178.0497 436.468 631.4655 505.2037 668.0238 119773174 pimF Organic Remediation Aromatics Aromatic carboxylic acid Shewanella amazonensis SB2B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella amazonensis; 2537.4013 1375.5206 1976.3668 2767.2151 1321.2711 1740.0145 1888.7565 2086.7282 1796.3009 2146.7611 1211.0803 1473.2887 118016696 phn Organic Remediation Herbicides related compound Serratia proteamaculans 568 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Serratia;species:Serratia proteamaculans; 2056.0146 2104.7006 2331.6246 1528.6986 1607.7876 2548.2224 5572.633456 2664.1625 2220.9979 2667.1176 1190.7314 2698.1868 197769182 gyrB other category gyrB Streptomyces clavuligerus ATCC 27064 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces clavuligerus; 1262.9046 706.116 844.875 1397.9694 730.0314 588.5144 580.8114 841.193 861.3018 666.7605 121606885 CadA Metal Resistance Cadmium Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 13658.1412 14223.95375 14110.2436 14711.7581 12001.3133 13321.9096 12153.8417 12130.65985 11794.94995 12560.1788 12373.7759 17902.16245 40253087 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1284.5709 1869.4858 1443.8436 1072.434 2453.7052 1379.7026 1200.2332 1579.3897 1306.8592 1509.0228 1711.2004 1568.1793 222438341 pimF Organic Remediation Aromatics Aromatic carboxylic acid Labrenzia alexandrii DFL-11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia alexandrii; 1522.4703 737.1059 1072.8105 1406.6536 1353.9952 688.6623 1009.0933 1458.2985 1007.4 957.7799 1540.2414 1100.4829 91699761 pimF Organic Remediation Aromatics Aromatic carboxylic acid Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 776.8838 1004.192311 705.2087 1057.2709 1313.7753 1889.9265 1212.9207 1048.0082 1103.8147 624.9759754 540.2855 11228489 katA Stress Oxygen stress Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 4734.41465 4262.72245 5580.7707 3029.84455 2798.80665 4472.3937 4256.5556 6729.04955 4734.1161 4867.8797 2889.23485 5778.70275 212171444 alkB Organic Remediation Other Hydrocarbons Alcanivorax sp. S15-9 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax; 6027.8912 4433.4663 3196.0261 4366.812 4663.7614 3491.68 2496.69 3095.2683 3402.0253 2587.3669 8161.5662 2078.1026 126706959 alkB Organic Remediation Other Hydrocarbons Sagittula stellata E-37 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 1948.8651 3339.8365 2294.3308 2398.012 2896.2966 2198.2303 3994.6444 1779.5944 2800.4276 1873.5627 2246.4205 2171.0568 115254790 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 2044.9598 11751.28165 3082.6763 2810.0883 3957.7179 3225.5083 1481.7808 2960.251 3090.5308 2635.3068 2055.046 311891095 cat_bac soil_benifit Rhodococcus equi 103S superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus equi; 3558.0544 3123.7355 3563.4728 2828.8676 3646.4496 2981.5958 2502.8266 2399.0789 2837.378 2722.5591 4786.8061 4190.7283 31618994 glnA Stress Nitrogen limitation Mycobacterium bovis AF2122/97 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium bovis; 1577.1935 1967.03 2529.8705 1409.4479 1734.9871 2297.6597 1758.3056 2140.3985 2240.37 2049.8586 1617.936767 2465.5333 120325952 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Marinobacter aquaeolei VT8 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter hydrocarbonoclasticus; 1294.7929 625.3869 1301.169 449.1041249 777.9567 1072.6201 601.6371 738.6218 57224952 mer Metal Resistance Mercury Dehalococcoides ethenogenes 195 superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides;species:Dehalococcoides ethenogenes; 1350.9936 987.4843 1124.9503 1302.3495 971.6652 1346.0771 624.4836 878.5045 1149.4743 2141.5872 78184480 sigma_70 Stress Sigma factors Synechococcus sp. CC9902 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 3072.5574 3099.8304 2955.732 3211.7682 4175.5154 3370.1003 2670.5443 2670.142 2748.2753 2677.8709 6323.7561 3005.6815 156451144 nagG Organic Remediation Aromatics Aromatic carboxylic acid Methylobacterium chloromethanicum CM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium chloromethanicum; 1118.1716 824.5962 1259.512 1104.4862 1177.4637 1071.1587 837.3721 1085.5352 1321.409 262375833 oxyR Stress Oxygen stress Acinetobacter lwoffii SH145 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter;species:Acinetobacter lwoffii; 2290.9589 3066.2411 3063.1352 2017.0564 1074.946913 2842.2929 2361.2955 3627.7473 3347.1005 2624.1268 1177.950221 3179.9038 146402358 ATP_synthase_F1_or_F0 Bioleaching other category Acidiphilium cryptum JF-5 1177.7707 1038.926 1011.5411 1157.6874 1045.5994 926.886 481.004 858.8466 1026.9702 601.6706 1628.6038 227181300 katE Stress Oxygen stress Corynebacterium glucuronolyticum ATCC 51866 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium glucuronolyticum; 2272.2746 2773.6805 1911.4189 2293.0889 5726.6898 1889.4428 3939.4841 1659.5805 1975.4033 2392.7468 2289.1603 2053.7277 126651415 SMR_antibiotics Antibiotic resistance transporter Bacillus sp. B14905 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 921.8989 863.3591 795.1499 1265.4184 1128.2425 1809.1187 784.2358 575.4342 936.9991 1046.2234 802.9167 10173360 atzA Organic Remediation Herbicides related compound Bacillus halodurans C-125 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus halodurans; 425.0382 555.6022784 501.0743 454.9489083 609.0550584 791.2774 448.5088 684.2119 691.5829 620.0293 74484304 cymA Organic Remediation Pseudomonas putida superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 2515.735 1624.5611 2613.4144 2228.1079 1265.9092 1321.2684 1224.6877 1888.6054 1609.0443 1604.6411 2413.8 1687.1289 38488389 coat_Tombusvirus soil_borne_pathogen structural Neckar river virus superkingdom:Viruses;family:Tombusviridae;genus:Tombusvirus; 2355.7093 1823.68265 2393.72275 2518.242 1975.5457 1995.1464 1812.65725 1894.72415 1848.8726 2025.09145 3507.17165 2238.2767 187919112 sigma_24 Stress Sigma factors Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 2532.627238 1498.51815 2014.655849 2264.478262 1587.34285 1801.25305 1633.95115 1377.449616 1927.957365 2449.064252 2564.5063 1880.5147 206590713 gyrB other category gyrB Ralstonia solanacearum superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 1873.5503 2109.186 2711.396 2665.8397 2095.4837 2503.4433 2486.9633 2600.143 1968.5654 2229.8171 2067.8697 2787.2411 38570182 mcrA Carbon cycling Methane Methane production uncultured euryarchaeote superkingdom:Archaea;phylum:Euryarchaeota; 1334.4181 743.3497 1070.0334 1521.5759 684.325 788.1193 807.2097 819.1183 3172.819416 1022.4695 86357913 Catechol Organic Remediation Aromatics Other aromatics Rhizobium etli CFN 42 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 1757.925 4008.81425 2283.17175 1587.6527 3962.7231 2145.27015 2739.618 1713.69265 3006.75935 1878.06845 2126.14135 1973.345601 287454 B_lactamase_A Antibiotic resistance Beta-lactamases Streptomyces cellulosae superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 2618.1831 5877.2997 4439.4429 3145.5818 7596.8963 4201.655 6528.3145 3735.2333 5402.8 3622.3069 3928.2869 3949.7256 111026180 akbF Organic Remediation Aromatics BTEX and related aromatics Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1145.56 763.6359 1216.6787 1313.3872 1288.1677 868.6612 1084.4527 700.0143 780.6826 938.4396 1199.211993 1669.2219 169866058 protease_serine_fungi Fungi function carbon degradation Coprinopsis cinerea okayama7#130 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis;species:Coprinopsis cinerea; 1375.4135 1455.6585 1697.8775 1615.1163 1232.3383 1004.6428 1210.0883 1191.7328 1103.3792 581.9337828 115390627 cutinase_fungi Fungi function carbon degradation Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 449.9039585 538.7693209 605.5133909 423.9155165 755.2327 760.0288 859.948 674.4851 504.0982 669.4455122 617.5712 139002641 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 2755.5015 1167.8679 1735.0404 1854.7134 1425.4916 1226.7147 1628.2906 1150.3174 1251.3404 1414.309 1399.289 1114.5861 124488195 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 2276.2371 963.7704 1161.127105 1883.7521 893.9606952 1616.3959 2144.5624 1294.5579 1641.4346 134045346 glucoamylase Carbon cycling Carbon degradation Starch Methanococcus maripaludis C5 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanococci;order:Methanococcales;family:Methanococcaceae;genus:Methanococcus;species:Methanococcus maripaludis; 1038.0748 761.6735 1045.2436 1096.0759 937.2836 853.346 781.719 793.2777 853.9136 760.7479 1973.1167 1468.9631 84684898 hly virulence hemolysin Rhodobacterales bacterium HTCC2654 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Maritimibacter;species:Maritimibacter alkaliphilus; 1134.0351 679.6712 609.7978 560.0339 347.7334624 609.8218 707.0484 1108.0387 809.7691 99080256 sigma_24 Stress Sigma factors Ruegeria sp. TM1040 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 1309.7296 1573.1704 1514.0984 1430.5695 981.4972 1719.6142 1305.071 1416.1394 1561.7612 1918.4519 967.8312 1723.1214 213964561 sigma_70 Stress Sigma factors Corynebacterium amycolatum SK46 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium amycolatum; 2496.6074 2080.0565 1648.167 2662.881 3319.2269 1712.7791 3542.4422 1570.9651 1913.9785 1851.9668 31306.45781 2540.869 13092864 ZntA Metal Resistance Zinc Mycobacterium leprae superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 3264.5587 3190.3281 3038.4326 3168.0594 3061.4152 3311.4867 2979.7701 3524.0379 2976.6294 3155.0692 3737.2673 3613.3791 261187883 ABC_multidrug_fungi Fungi function metal resistance Ajellomyces dermatitidis SLH14081 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces dermatitidis; 750.0863 1386.8997 1182.0747 724.1334 1570.7243 1353.2422 1430.725 1743.2284 1365.4633 1442.9403 71736841 katE Stress Oxygen stress Pseudomonas syringae pv. phaseolicola 1448A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas savastanoi; 1578.0531 1895.5061 1692.1926 1730.696 2541.0897 1632.1947 1655.1653 1892.2367 1759.4087 1955.2118 1654.2861 1654.2811 112774547 xylG Organic Remediation Aromatics Aromatic carboxylic acid Delftia sp. AN3 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia; 2755.3537 2875.9268 2726.8224 2523.6594 2571.6714 2530.3796 2083.2916 2375.6814 3262.0866 3087.2218 4227.6095 4622.7754 58039775 oxyR Stress Oxygen stress Gluconobacter oxydans 621H superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconobacter;species:Gluconobacter oxydans; 1168.9188 1002.4685 1199.6566 806.1849 603.2076499 917.1674 949.6507 771.3708958 160937651 ChrA Metal Resistance Chromium Clostridium bolteae ATCC BAA-613 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium bolteae; 2127.89755 1493.29365 2741.1292 2338.5784 1701.08745 1429.90335 2012.21055 2398.0077 1315.32215 1927.552091 1595.8103 1625.5233 150019479 cellobiase Carbon cycling Carbon degradation Cellulose Clostridium beijerinckii NCIMB 8052 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium beijerinckii; 459.7767539 531.887 448.8644625 1119.7312 621.2347821 545.2946 416.2036228 514.8178752 145300246 obgE Stress Radiation stress Aeromonas salmonicida subsp. salmonicida A449 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas;species:Aeromonas salmonicida; 2297.393 617.415 1523.9707 1951.9795 1015.8898 664.5378 756.4042 928.9787 1027.4944 1259.1289 1666.2984 1140.1832 46133893 p450aro Fungi function organic remediation Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 809.8332 557.7671 831.5859 1197.7527 731.6472016 558.7071 695.979 482.7063 800.3285 809.0874 975.9515 881.452 269096893 cda Carbon cycling Carbon degradation Starch Sanguibacter keddieii DSM 10542 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Sanguibacteraceae;genus:Sanguibacter;species:Sanguibacter keddieii; 4893.7351 8010.4545 5644.8244 7021.7759 4707.7537 8718.2595 5490.5379 5710.2511 7604.2043 8034.2716 5845.0659 7678.9371 50084777 nhh Organic Remediation Aromatics Nitoaromatics Acinetobacter sp. ADP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter; 1226.3284 1047.8968 636.7568 740.1732 770.3639 668.8702103 811.422 645.5841 647.5201 1511.8202 722.8159 260895900 endochitinase Carbon cycling Carbon degradation Chitin Vibrio parahaemolyticus Peru-466 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio parahaemolyticus; 2865.0016 1617.9095 1391.5742 2509.5783 2677.4846 1091.2706 1555.3514 1893.2172 1759.4437 1658.1843 2779.8869 1646.5773 87281183 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2637.7405 2232.3937 2833.8184 2757.8323 3258.5754 3148.852 2507.6326 2072.9051 2141.0629 2425.297 4524.3854 3082.4316 27657619 chnC Organic Remediation Other Hydrocarbons Arthrobacter sp. BP2 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 3575.5298 2900.1036 3704.312 2230.9707 2558.8168 2898.1248 2858.7248 4122.6345 2800.8004 2884.8522 2724.005382 3750.4005 270495542 sigma_32 Stress Sigma factors Acidovorax avenae subsp. avenae ATCC 19860 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax avenae; 1468.8889 1974.7775 1560.4212 1520.0554 1148.0568 1626.8253 1852.7056 2301.7969 1807.9266 2030.3509 1376.7539 2466.3435 95109326 nitro Organic Remediation Others Pseudomonas superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae; 1789.8536 2696.159 2087.6666 1897.2442 3599.7143 2320.7971 3906.0254 1433.1096 2232.3323 1650.6134 1760.5229 1404.2013 111073737 endochitinase Carbon cycling Carbon degradation Chitin uncultured bacterium superkingdom:Bacteria; 1695.9484 799.9649 1192.6595 1976.3885 1725.6116 2552.0224 1175.9422 1492.8112 2548.2843 1044.4138 110830374 pcc Carbon cycling Carbon fixation Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 6754.9008 9028.2151 7435.711 7315.2453 20204.2102 8696.1541 13049.483 5652.8647 9912.0217 8316.0905 8660.5813 6076.7977 257063543 nrfA Nitrogen Dissimilatory N reduction Slackia heliotrinireducens DSM 20476 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Coriobacteriales;family:Coriobacteriaceae;genus:Slackia;species:Slackia heliotrinireducens; 1529.9655 1751.4133 521.8529181 1649.2916 1214.5479 700.747 849.2442 768.7423 899.6008 1003.9531 2374.0392 880.628 163852960 fnr Stress Oxygen stress Methylobacterium extorquens PA1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 1001.8345 573.4914 652.3888453 753.4312248 706.7533748 1056.6767 913.5348 730.166 661.811 707.2271 840.0078 67852784 fnr Stress Oxygen stress Crocosphaera watsonii WH 8501 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Crocosphaera;species:Crocosphaera watsonii; 1778.7182 1268.6998 1649.5337 1441.3358 912.956924 1467.8699 977.3896 1370.3368 1187.2013 1409.7308 1951.2543 1258.9131 4580557 tfdB Organic Remediation Aromatics Chlorinated aromatics unidentified bacterium 202NPUT superkingdom:Bacteria;phylum:Proteobacteria; 3982.2194 2715.7189 4872.1089 3574.7526 3975.189 4007.4326 2880.1512 3214.7495 3096.1591 4013.8696 5762.8297 4068.785 311320315 phospholipase_A2_fungi Fungi function carbon degradation Pyrenophora teres f. teres 0-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora teres; 1465.8532 1751.2603 2140.7648 1958.0475 1129.0783 2072.3732 1810.7245 1486.7315 1555.0398 1828.5843 2675.1156 3930.9946 537423 coat_Tobravirus soil_borne_pathogen structural Tobacco rattle virus superkingdom:Viruses;family:Virgaviridae;genus:Tobravirus; 678.5728 732.572 645.7140509 1382.3018 1052.9077 679.1178 785.4021667 930.517 869.3639 726.7821096 255336136 fnr Stress Oxygen stress Hyphomicrobium denitrificans ATCC 51888 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Hyphomicrobiaceae;genus:Hyphomicrobium;species:Hyphomicrobium denitrificans; 617.0026999 812.529 1062.1094 628.7164 594.4941605 703.2895 488.8152 1769.6083 833.7959 678.2278 1152.4122 752.5876 99030505 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 786.9983 680.3887 448.4864346 1058.3256 664.873 590.5042 728.1989 455.171579 506.3909 804.967 725.0384394 153884706 chnB Organic Remediation Other Hydrocarbons Ralstonia pickettii 12D superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 898.4058 1829.1301 1082.7119 1126.0324 704.9901411 2054.3359 1352.2595 1312.7205 1490.5513 1902.5508 936.2868 1766.8726 126720178 pimF Organic Remediation Aromatics Aromatic carboxylic acid Roseobacter sp. SK209-2-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 887.257 1678.6023 1723.3361 884.4629 1204.9922 2012.7275 1547.804 1645.5274 1980.5289 1629.9331 790.5775514 1886.7835 158139518 pstA Stress Phosphate limitation Alkaliphilus oremlandii OhILAs superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Alkaliphilus;species:Alkaliphilus oremlandii; 2416.0942 1997.9944 2458.2054 2200.658 2998.223 2284.9618 1842.2677 1884.0542 1791.4783 2027.2019 1840.4047 2451.6362 119382966 merP Metal Resistance Mercury Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 947.9844 466.0065719 776.3882421 798.4311 627.961024 699.1109 754.0815 238721800 proW Stress Osmotic stress Yersinia frederiksenii ATCC 33641 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia frederiksenii; 2183.9169 1626.4215 2014.6493 1812.9633 3156.8575 1990.9212 1479.2694 2346.8974 2069.6316 1868.1693 2186.5512 2903.2657 126103968 CopA Metal Resistance Copper Rhodobacter sphaeroides ATCC 17029 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 9463.3937 11457.0353 12066.3336 11409.778 11124.9625 13170.9458 9394.5523 10296.1202 12089.0332 11323.2117 15100.6165 12168.8383 262309367 katE Stress Oxygen stress Acinetobacter lwoffii SH145 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter;species:Acinetobacter lwoffii; 813.2584 895.4448 1172.1006 654.1380161 1073.0908 938.0584 918.7423 2029.717 864.0715 1276.2247 1210.4556 1507.3175 146329593 pstB Stress Phosphate limitation Dichelobacter nodosus VCS1703A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Cardiobacteriales;family:Cardiobacteriaceae;genus:Dichelobacter;species:Dichelobacter nodosus; 635.1632705 726.3257 890.0928 641.729 739.9717 724.5275 476.6224 690.234 640.2605 635.3263 789.880838 830.711 115422863 nagK Organic Remediation Aromatics Aromatic carboxylic acid Bordetella avium 197N superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella avium; 4760.9569 5104.2471 5252.3019 2579.2987 1403.0056 4990.2552 4389.7479 6336.9619 5589.1713 3741.6874 1446.6655 4287.2529 1899048 endochitinase Carbon cycling Carbon degradation Chitin Serratia plymuthica superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Serratia; 3422.0121 985.9425 2215.7885 3475.9661 1378.9649 1205.0879 1838.1613 2024.1975 1262.3253 1714.3627 2301.4129 2036.1228 139003429 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 902.7444 1687.1908 1665.8906 881.7905378 1261.8898 1600.7715 1604.3293 1682.0097 1690.9363 1693.7606 1999.375 87302713 pstB Stress Phosphate limitation Synechococcus sp. WH 5701 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 9402.7424 14079.5042 14425.496 6257.4129 7081.1022 13315.284 11400.3166 15285.7918 17703.7156 14592.9528 2434.8215 15819.4595 114339494 pstB Stress Phosphate limitation Maricaulis maris MCS10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Maricaulis;species:Maricaulis maris; 8081.9625 16086.6605 15115.8889 9356.4779 22899.0238 12054.9924 13293.363 16963.8474 13401.1694 14567.8283 11775.5873 19419.0606 157918336 xylA Carbon cycling Carbon degradation Hemicellulose Salinispora arenicola CNS-205 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora arenicola; 1059.4322 1291.8912 1278.8641 1153.1809 1236.7495 1223.888 947.6358 1603.9372 1104.6104 1296.3801 1258.9373 1237.3395 110347018 CadA Metal Resistance Cadmium Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 3283.604443 2898.8294 3180.181163 3448.559023 3437.53135 2648.2351 2326.862196 2550.39445 2761.04255 3039.691136 6928.9359 2419.98315 161393221 atzB Organic Remediation Herbicides related compound Roseobacter litoralis Och 149 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter litoralis; 5029.1461 5129.7195 3933.3089 4078.1504 2139.0148 2838.7932 4083.7566 7289.8465 3175.3952 4488.4437 6610.754 4492.6065 237637232 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 10081.6779 3579.6641 5167.653 8434.6893 4344.7672 4422.9333 7585.4909 8311.2172 4262.4157 7183.4328 3639.295 4404.4036 210076148 AceB_fungi Fungi function carbon degradation Yarrowia lipolytica superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Dipodascaceae;genus:Yarrowia;species:Yarrowia lipolytica; 1623.7901 1415.6661 1995.0719 1176.0221 722.4784 1069.2432 435.3930884 1415.2293 1471.1909 1878.4117 1004.6861 224603794 narI Stress Oxygen limitation Lutiella nitroferrum 2002 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Lutiella;species:Lutiella nitroferrum; 805.7006998 752.9703 1004.1405 875.7513 876.3477 686.6432 702.6547 1012.8976 701.8601 927.8203 1352.2969 1127.6181 142852074 pcbC soil_benifit Aeromonas salmonicida subsp. salmonicida A449 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas;species:Aeromonas salmonicida; 576.5175225 1131.1167 163758088 glnA Stress Nitrogen limitation Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 1537.8906 1917.882 1670.2234 1938.6792 1505.9938 2135.2344 1480.8867 1720.3197 1791.4666 1819.7293 2190.4432 2009.5507 78609680 ZntA Metal Resistance Zinc Lactobacillus sakei subsp. sakei 23K superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus sakei; 6166.1229 4605.9877 4698.1731 4212.2081 3145.4438 4184.6946 4059.782983 3412.8965 3817.8107 5722.5932 4638.3821 3372.5412 118701991 vanA Carbon cycling Carbon degradation Others Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 2710.4495 2787.0007 2744.1534 2925.5311 4252.1498 3325.0969 2301.18 4675.9894 2729.1128 3150.0666 4532.6739 4201.5906 198246673 gyrB other category gyrB Acidithiobacillus ferrooxidans ATCC 53993 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus;species:Acidithiobacillus ferrooxidans; 4151.86265 3037.76785 3114.2197 4387.00675 2889.2626 3538.26885 3971.465 3607.83575 3555.1214 3922.20985 2819.03495 3265.9027 177670513 AceB Carbon cycling Carbon degradation Others Micrococcus luteus NCTC 2665 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Micrococcus;species:Micrococcus luteus; 5058.5629 4202.6731 8362.0507 4013.594 5510.0202 2931.3277 3861.7274 8531.9507 4025.9539 4450.9356 6916.2989 7132.2248 159036203 CopA Metal Resistance Copper Salinispora arenicola CNS-205 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora arenicola; 6223.9893 5029.512 5771.4343 7239.3337 2146.0488 5236.2861 4456.5275 3975.1036 4174.5012 4206.703 4160.9412 3911.5496 110599524 linB Organic Remediation Pesticides related compound Geobacter sp. FRC-32 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 1787.1806 2134.2633 1755.4829 1799.8822 2793.8013 2397.463 2404.0794 1603.2351 1928.6328 1981.0733 2576.903 1719.9355 115386594 exopolygalacturonase_fungi Fungi function carbon degradation Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 676.1953 594.1561 841.48 436.1371182 553.427 386.5278702 558.5316 570.862273 70982827 ChrA Metal Resistance Chromium Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 466.8556154 878.2679 773.3432202 1242.1909 686.5932817 733.1311 386.4673485 732.2521 533.8790004 506.9416789 220714386 bclA Organic Remediation Aromatics Aromatic carboxylic acid Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 2086.66035 880.5042 1381.46195 1775.15815 1409.0253 1204.94585 1259.86685 1261.6949 1180.0489 1461.303 2057.7193 1667.2307 87280986 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 2244.9667 3927.4976 3122.5435 1844.0567 5327.6674 2321.3804 3221.5396 1821.463 2713.678 1644.6282 2988.7087 2149.346 272542845 sigma_70 Stress Sigma factors Burkholderia sp. CCGE1002 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1364.9229 3569.0241 3597.3595 1934.2138 1962.5394 3850.0626 3241.9681 3034.7711 4200.8045 3481.3193 569.0707284 3194.6524 209965307 ChrA Metal Resistance Chromium Rhodospirillum centenum SW superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum centenum; 5739.8893 4872.1542 5716.9839 6224.7854 6413.2146 6157.2794 4887.0167 5628.3052 4467.4603 4778.3918 9351.7931 6696.5248 121227812 phn Organic Remediation Herbicides related compound Burkholderia mallei SAVP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia mallei; 3784.2542 2096.367 2120.6857 2943.3926 2586.7442 2255.4082 1853.1185 2559.1095 2458.0188 2606.4503 3111.1621 2451.5813 73696826 amoA Nitrogen Nitrification Archaea superkingdom:Archaea;phylum:Crenarchaeota; 2069.2454 2056.6357 2681.7645 2106.2273 3052.0112 1555.2446 1773.951 1037.3604 1695.7124 1262.8919 2090.8612 1340.0712 114540837 SMR_antibiotics Antibiotic resistance transporter Roseovarius sp. HTCC2601 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pelagibaca;species:Pelagibaca bermudensis; 3517.744 2715.6679 3492.7479 2624.3773 2659.492 3343.5529 2556.0714 2766.0684 2978.8544 2511.234 3243.1293 3630.9977 72384064 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 1285.0544 2102.4069 1852.3305 1441.7467 2753.7967 2053.5282 1561.7518 1866.0915 1704.0181 1476.83 1662.887 2867.3693 210072770 katE Stress Oxygen stress Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 440.2192164 500.5670451 814.5165 551.3509 604.5721 523.0256 753.6125 577.6630368 46203201 ZntA Metal Resistance Zinc Magnetospirillum magnetotacticum MS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magnetotacticum; 2585.3949 1924.3552 2385.1008 2312.1696 2474.39 2014.0885 2153.432 2252.2662 1808.7653 1909.8314 2196.8097 2312.1705 222111860 fnr Stress Oxygen stress Diaphorobacter sp. TPSY superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax ebreus; 2104.532 2847.4514 2825.4146 2551.5064 2550.6453 2563.777 4035.6849 2354.9225 2731.7571 2644.5614 2048.602 2992.1414 198255066 xylA Carbon cycling Carbon degradation Hemicellulose Octadecabacter antarcticus 307 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Octadecabacter;species:Octadecabacter antarcticus; 3643.2689 5600.5314 4488.1356 2924.1202 4875.2929 4300.2618 3038.8303 3588.0816 4590.7643 3802.7456 2433.1878 2493.3001 86280961 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Rhizobium etli CFN 42 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 3047.8286 1232.5619 1589.5874 2101.3784 1157.4228 1013.6325 1636.985 1546.3813 1319.0673 1979.8897 1291.3465 1341.2248 254045349 narJ Stress Oxygen limitation Lactobacillus plantarum JDM1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus plantarum; 1022.338039 865.8205 762.8398792 1188.7859 631.650067 1155.392277 211958707 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Pseudovibrio sp. JE062 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pseudovibrio; 1178.3214 686.7218 706.0374 1105.1574 826.9201 491.0562053 425.1096 1045.216 635.7523 635.773 1068.4462 808.4234 255689994 MFS_antibiotic Antibiotic resistance transporter Bacteroides finegoldii DSM 17565 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides finegoldii; 772.9213 875.9232 779.3164 793.3606 1223.0038 917.3439 735.4481 691.0087 725.3676 678.2166 1263.1416 773.2823 67530644 PobA Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia vietnamiensis G4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia vietnamiensis; 1479.0437 2022.7532 2445.934 1555.1211 1185.4829 2484.6731 1659.1684 2075.5075 2864.5433 2323.995 884.5617913 2039.9816 505629 lip Carbon cycling Carbon degradation Lignin Phanerochaete chrysosporium superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Corticiales;family:Corticiaceae;genus:Phanerochaete; 740.2673 940.4006 1026.0953 755.472 593.9324 556.295 487.6724 1309.0286 41408488 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium avium subsp. paratuberculosis K-10 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium avium; 2653.9533 857.1025 1784.1694 2442.844 1238.4558 1090.3433 1181.227 2204.999 1086.6594 1538.4464 2756.8232 1516.8478 170017684 obgE Stress Radiation stress Leuconostoc citreum KM20 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Leuconostocaceae;genus:Leuconostoc;species:Leuconostoc citreum; 649.3173 778.5210954 717.8588061 934.8428 797.3529 489.015312 873.0295 927.6528 860.5926 145214436 Catechol Organic Remediation Aromatics Other aromatics Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 6019.8989 6414.4876 6249.6961 6635.8755 10850.0872 6895.6115 5531.2191 8091.3794 7517.2916 7282.0214 8289.8816 7782.7948 119671145 pheA Organic Remediation Aromatics Other aromatics Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 5087.805 2186.2912 3637.5612 4845.5268 3181.0119 2936.9513 2440.3942 2536.5229 2849.4114 3199.3106 12202.8649 4611.5012 295799325 CysJ Sulphur sulfite reductase Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 3147.6842 2062.2806 3331.1852 3103.366 1362.733202 3232.682 3653.9213 3151.0447 2549.7891 3845.5131 2446.6176 2623.0571 110648402 ahpF Stress Oxygen stress Alcanivorax borkumensis SK2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax;species:Alcanivorax borkumensis; 1846.3096 1862.4009 575.1094 1797.8001 678.9208251 1847.4755 2423.0971 2565.1495 1156.9258 2018.6373 1018.8029 218751054 CODH Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 1193.7417 1155.4312 1215.9953 700.6547407 866.7618 874.7196 2409.9122 966.7452 951.6383 1556.3859 561.4451875 117619171 B_lactamase_C Antibiotic resistance Beta-lactamases Aeromonas hydrophila subsp. hydrophila ATCC 7966 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas;species:Aeromonas hydrophila; 2108.4274 2333.9137 1758.3763 2048.2046 2332.5348 2538.8897 2181.3276 1309.6702 2255.8515 2464.4019 1478.8104 3067.0514 302418356 hmgB_fungi Fungi function carbon degradation Verticillium albo-atrum VaMs.102 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Plectosphaerellaceae;genus:Verticilium;species:Verticillium albo-atrum; 831.9159 681.3206417 1109.4645 808.921 643.3298 690.3701 1271.9412 734.7683 666.2574 845.5694 261193521 sulfate_transporter Fungi function Sulfur Ajellomyces dermatitidis SLH14081 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces dermatitidis; 758.2935 1337.4841 922.7339 781.8136 882.5664 1012.4958 1281.4309 983.4964 1246.6342 1191.8175 624.5915818 1135.9261 221563818 cytochrome Energy process Energy process Geobacter sp. FRC-32 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 1370.5242 1826.3904 1597.3079 1143.0721 1712.7096 1668.8675 1591.5514 1416.3209 1717.2978 1810.1931 1863.156 1753.1815 194683909 pap virulence adhesin Proteus mirabilis HI4320 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Proteus;species:Proteus mirabilis; 474.2165567 625.1640608 644.7410509 1071.3465 767.9156 425.4537 695.5637596 737.0049 712.989 1212.3741 163811600 rd Organic Remediation Chlorinated solvents Dehalococcoides sp. VS superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides; 17819.4736 18030.6392 15347.1831 16250.3874 16183.5183 19458.3698 15357.1093 17926.1855 18127.1545 18870.4064 10740.1829 17897.6857 229749761 B_lactamase_C Antibiotic resistance Beta-lactamases Stackebrandtia nassauensis DSM 44728 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Glycomycetaceae;genus:Stackebrandtia;species:Stackebrandtia nassauensis; 2874.2967 2638.1422 2387.8052 1667.0299 1414.7226 1962.7436 1755.3463 5072.6706 2372.9699 2214.4744 4571.1373 2117.6792 283850764 spe soil_benifit Desulfovibrio sp. FW1012B superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio; 5883.635338 5159.00825 6444.240891 2817.528696 3123.32755 5380.589872 4827.997752 8307.33523 4941.767138 4736.734261 2824.62065 5944.171324 223470335 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 5696.1537 3359.38355 3005.58065 2470.5472 2311.4518 1973.34015 2114.525 2964.6571 2407.4216 2005.6395 4308.688137 2547.12405 281316103 sigma_70 Stress Sigma factors Victivallis vadensis ATCC BAA-548 superkingdom:Bacteria;phylum:Lentisphaerae;family:Victivallaceae;genus:Victivallis;species:Victivallis vadensis; 24623.58456 648.3960261 551.9244 877.4629 253689498 sped_bac soil_benifit Pectobacterium carotovorum subsp. carotovorum PC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium carotovorum; 1739.5094 1422.3495 1607.6891 2165.428 2188.0821 1409.1216 1488.2276 974.3455 1330.8677 1471.2244 1771.4301 88805792 pcc Carbon cycling Carbon fixation Robiginitalea biformata HTCC2501 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Robiginitalea;species:Robiginitalea biformata; 613.1306 1213.6774 993.5557 562.3519 2050.6065 910.808 1098.2169 821.3475 874.1012 650.535 635.4266769 858.6288 27383232 catB Organic Remediation Aromatics BTEX and related aromatics Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 934.3103 667.5489 556.2143 347.1605801 506.1973781 525.4683 223937206 sigma_24 Stress Sigma factors bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3; 1494.961 1410.1931 1448.2927 1601.6516 1808.5592 1523.2921 1774.5711 1503.6447 2397.7159 32755.01321 1826.471 87308751 ahpC Stress Oxygen stress Blastopirellula marina DSM 3645 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Blastopirellula;species:Blastopirellula marina; 5273.8423 2483.9445 3503.3617 5047.1818 2678.2809 3122.5289 3941.9502 4036.0123 3156.0463 4236.9641 2188.9297 3051.3004 77996565 akbF Organic Remediation Aromatics BTEX and related aromatics Carboxydothermus hydrogenoformans Z-2901 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Carboxydothermus;species:Carboxydothermus hydrogenoformans; 1333.3301 2193.9495 1775.7655 1908.1474 1801.5161 2070.9224 1816.4367 1204.9319 2171.5132 1906.7606 1496.4205 2216.2912 109660018 ureC Nitrogen Ammonification unidentified bacterial contaminant superkingdom:Bacteria; 7146.594221 5372.644214 4516.545989 5656.630962 7081.250948 5880.589872 5284.491065 5292.346003 7708.742501 5918.066195 5816.956564 9797.9346 89346908 ureC Nitrogen Ammonification Rhodoferax ferrireducens DSM 15236 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Albidiferax;species:Albidiferax ferrireducens; 5459.8527 6345.818 7496.8496 7459.9597 8958.5512 9064.0938 4857.8938 7112.9789 7654.2714 6242.1235 7794.6144 8746.4074 171320783 chnB Organic Remediation Other Hydrocarbons Burkholderia ambifaria MEX-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ambifaria; 3557.4163 2535.87685 2448.3549 2439.1936 1868.121 2547.42225 2742.10125 2498.67285 2176.92995 4587.59065 2386.8804 3491.1818 114335877 SMR_antibiotics Antibiotic resistance transporter Shewanella frigidimarina NCIMB 400 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella frigidimarina; 1074.4226 3102.8632 1257.6655 2740.1269 1692.7227 2812.626 792.4425 2043.9806 1064.0286 1111.041707 1234.6755 15899388 catB Organic Remediation Aromatics BTEX and related aromatics Sulfolobus solfataricus P2 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Sulfolobales;family:Sulfolobaceae;genus:Sulfolobus;species:Sulfolobus solfataricus; 977.8231494 1259.0537 975.6286 1099.788 1818.2384 754.6195 849.4965 678.5934758 894.3321 1835.3836 1098.3544 82617303 pstB Stress Phosphate limitation uncultured archaeon superkingdom:Archaea; 450.8576571 849.9667 785.1832 1289.3367 867.7915 657.9762 924.5062 762.7802 904.9586777 798.6322 119470607 BpH Organic Remediation Aromatics Aromatic carboxylic acid Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 721.7349255 999.3476 838.6838815 606.3757 863.9051 735.3219 909.2124 1021.0992 813.889 819.2554346 91786006 rubisco Carbon cycling Carbon fixation Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 1034.3003 2329.5812 1471.2215 1401.4349 1298.8988 2479.6329 1823.6974 1467.7762 2101.8758 2658.2626 1876.8138 151302126 AprA Sulphur adenylylsulfate reductase Thermodesulfatator indicus superkingdom:Bacteria;phylum:Thermodesulfobacteria;class:Thermodesulfobacteria;order:Thermodesulfobacteriales;family:Thermodesulfobacteriaceae;genus:Thermodesulfatator; 3637.7893 2952.27264 2717.7497 3135.598444 1925.3693 2746.812 1850.5492 1626.774799 10921.94845 2018.57025 4519.219681 1858.23395 52785978 trzN Organic Remediation Herbicides related compound Bacillus licheniformis ATCC 14580 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus licheniformis; 1018.7323 942.9614121 946.7044 971.6053 724.5169 673.748 852.1899 1716.8702 226304077 mgtB soil_borne_pathogen magnesium uptake Rhodococcus erythropolis PR4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus erythropolis; 1992.0366 2893.2864 3283.0304 2061.861 2674.2994 1970.9994 2156.506 4513.6106 2609.0938 2161.3891 4967.2309 2540.251 83836813 ArsC Metal Resistance Arsenic Roseovarius nubinhibens ISM superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius;species:Roseovarius nubinhibens; 1555.9167 1515.794437 890.6481724 1234.254719 1788.3233 1816.4482 797.0707499 2234.5611 1538.6921 822.9494239 91690062 pimF Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 1109.5078 2132.5431 1664.6257 1653.2776 778.1562 1928.7031 1851.0768 1894.7665 2241.4301 2243.6077 1098.8854 2297.8476 150375874 rubisco Carbon cycling Carbon fixation Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 1188.9867 775.7158 1224.6754 1201.2592 1167.6823 1424.0746 809.8 1197.7553 1678.7305 1011.2436 1034.1145 27378078 catechol_B Organic Remediation Aromatics Other aromatics Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 1501.2741 896.1075 1643.3254 1190.1094 2088.6204 1128.422 1842.6921 1131.3258 1327.0585 1265.4602 1890.2303 167071478 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Rhizobium leguminosarum bv. trifolii WSM1325 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 2136.9979 3415.3998 3602.1866 2605.7486 2941.4772 2730.719 1930.3017 3302.7476 2829.8295 2904.7062 4380.454 3504.1108 124261352 exaA Organic Remediation Chlorinated solvents Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 1168.3144 1002.5333 1086.422984 697.4369 493.7244047 1118.3863 714.492 1010.7068 1142.4694 809.4671 992.9449 67547414 ZntA Metal Resistance Zinc Burkholderia vietnamiensis G4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia vietnamiensis; 11808.7221 5460.924 6933.4736 10240.9682 6354.3073 6013.9533 6917.9008 4169.2198 6394.2526 8437.146 8647.4878 7176.9236 255300099 iro virulence Iron oxidation Campylobacter showae RM3277 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Campylobacteraceae;genus:Campylobacter;species:Campylobacter showae; 3788.4451 1880.3679 2784.326 3349.6612 3364.1231 2132.4825 2305.2405 3030.5346 2636.9697 2561.1704 4040.8662 3343.5385 17431118 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia solanacearum superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 2538.4624 711.6335 1558.2839 1668.9338 1066.2188 1220.329 1994.5783 1285.9261 1455.4462 2339.0594 1539.6435 71366857 amyA Carbon cycling Carbon degradation Starch Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 1620.5529 758.1311 737.1083 1608.0894 963.4478 1384.7429 1675.7314 1703.6279 1144.8225 887.9784 856.5011 1853.6336 91787791 ophC Organic Remediation Aromatics Aromatic carboxylic acid Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 6072.1506 4339.2861 3948.2845 6276.9593 4033.5085 2794.2833 4049.3115 2782.7723 4066.8883 3653.9638 3960.576 3367.7898 226185191 SMR_antibiotics Antibiotic resistance transporter Rhodococcus erythropolis PR4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus erythropolis; 1381.2834 752.6263 1236.6269 1382.0666 1433.1912 1698.4998 1404.8461 897.5505 1356.2546 918.749 77543319 nahA Organic Remediation Aromatics Polycyclic aromatics Sphingomonas sp. AC3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 2947.9393 2945.10395 3802.34445 2904.34785 3103.7423 2901.588346 2845.35055 4276.8752 2807.91205 3678.523572 5017.9067 3746.56235 25028861 benAB Organic Remediation Aromatics Aromatic carboxylic acid Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 3570.8553 2968.5566 2471.8579 3254.573 1622.0072 2748.188 2354.918 1695.5907 2011.0879 2136.5885 1771.8385 1976.648 91692411 sigma_70 Stress Sigma factors Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 3068.38 2986.6128 1776.6234 3103.7633 1411.253 3337.2115 5573.9686 3559.7697 2384.2344 3292.6063 1810.5662 1123.3885 223693684 ahpC Stress Oxygen stress Desulfobacterium autotrophicum HRM2 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfobacterium;species:Desulfobacterium autotrophicum; 3548.9741 2072.3855 2065.0868 2762.5579 2974.0876 2499.106 2916.4316 3507.5882 1859.4731 2261.6527 3471.6753 2087.3856 145242124 vdh Carbon cycling Carbon degradation Others Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 1027.6916 1000.3165 220927201 CopA Metal Resistance Copper Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 4508.6177 4013.0639 3152.4222 3454.009 3753.097 3503.4207 3634.8807 5896.4753 2329.4611 3876.6228 5878.7003 3506.2668 148474814 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 2845.7934 2420.3464 1835.1884 2876.4939 4922.9572 1754.7614 4200.73 2061.8539 2098.2181 2010.6867 2796.1035 2132.4689 1813636 nifH Nitrogen Nitrogen fixation Frankia sp. superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 1048.2028 2570.492 1493.525 1362.8215 1745.9836 1607.0232 2317.1007 3133.5541 1871.8326 2539.9206 2241.1879 254441200 glnA Stress Nitrogen limitation Octadecabacter antarcticus 307 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Octadecabacter;species:Octadecabacter antarcticus; 2117.8032 1783.7666 1388.1283 2355.2894 2060.4086 1367.3338 1899.2632 1511.2668 1070.6071 1624.3164 2762.0287 2478.8262 302406462 pec_CDeg Fungi function carbon degradation Verticillium albo-atrum VaMs.102 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Plectosphaerellaceae;genus:Verticilium;species:Verticillium albo-atrum; 1354.6069 614.1529 703.4203 1049.4907 877.7127 864.8324 732.179 521.0163 762.4117 651.3917689 157848467 endochitinase Carbon cycling Carbon degradation Chitin Shewanella pealeana ATCC 700345 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella pealeana; 2621.1248 2455.5796 2957.4477 2864.262 4126.3533 2781.9294 2110.8431 2021.1472 2131.8602 2171.9973 4638.4302 3196.2728 74136893 nahF Organic Remediation Aromatics Polycyclic aromatics Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 3454.263 3127.2269 3444.0116 2845.1403 3992.8972 3164.0027 2473.589 3700.7724 2702.9027 2549.8029 3446.4975 3385.6007 167589250 MFS_antibiotic Antibiotic resistance transporter Burkholderia ubonensis Bu superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ubonensis; 6073.5744 4720.1483 3909.2315 4320.939 3736.185 3571.8308 2609.7635 3430.4598 3641.2129 2583.9834 6913.6562 3392.5492 73540805 TehB Metal Resistance Tellurium Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 1590.3706 2283.2748 2507.029 1938.1039 2208.1034 2227.7092 1735.9845 1837.6586 2098.6374 1828.0706 2508.8653 2535.1426 307590719 glucoamylase_fungi Fungi function carbon degradation Aureobasidium pullulans superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Dothideales;family:Dothioraceae;genus:Aureobasidium; 893.906 508.8739 467.3999397 584.0131 743.0299 626.6745 462.2167861 709.9294 149810275 ArsC Metal Resistance Arsenic Roseobacter sp. AzwK-3b superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 6380.1129 9856.0862 5703.0405 4824.6929 10953.4167 5195.4106 6202.9156 4042.5849 5211.8856 5705.0172 8991.4241 5351.3864 119697302 TerC Metal Resistance Tellurium Mycobacterium sp. KMS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 5073.8488 2587.7709 3133.6808 4054.2208 3619.4006 3014.365 2519.2405 3818.8254 4411.8133 2579.5503 5841.1259 3638.7703 259020359 phzF soil_benifit Rhodobacter sp. SW2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter; 2539.4295 3370.3676 3022.8899 3471.0898 1941.1531 4213.4854 2768.5344 2744.4017 3429.575 4062.466 1806.0976 3775.723 47420448 endochitinase Carbon cycling Carbon degradation Chitin Streptomyces sp. MG3 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 534.4607573 1160.9487 601.4277821 714.819 1321.4986 839.0777 1560.1574 906.1708 597.3046 854.5792 464.3440766 148656833 glnA Stress Nitrogen limitation Roseiflexus sp. RS-1 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus; 4825.6065 4624.9104 5149.4787 5535.9917 5494.9853 5645.2658 4131.2204 4901.488 4526.8349 4779.9104 6611.3066 5746.0541 13506822 pcpA Organic Remediation Aromatics Chlorinated aromatics Sphingomonas sp. UG30 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 1286.8409 1313.9486 1361.8991 1120.1699 847.5292 711.7697 704.7996 2431.6273 1045.9463 1153.3937 2234.0479 1366.3412 83312466 dsrB Sulphur sulfite reductase Magnetospirillum magneticum AMB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magneticum; 2284.8741 2272.9023 3168.4302 2074.408 2197.6946 2277.8127 2001.8185 3953.7638 2451.705 2158.1397 2258.2647 2747.6507 269143440 SMR_antibiotics Antibiotic resistance transporter Brevundimonas subvibrioides ATCC 15264 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Brevundimonas;species:Brevundimonas subvibrioides; 3260.8245 3786.2337 3771.2663 3087.1756 2658.6957 3748.4047 2864.8155 4525.0976 2983.0247 3477.0314 4956.0835 3819.1172 219950047 fnr Stress Oxygen stress Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 3985.2417 2268.5699 2563.8638 3353.9075 3146.7141 2406.6761 1869.3489 2265.6172 2179.0617 3053.4433 3983.8558 3303.0006 119773417 sigma_70 Stress Sigma factors Shewanella amazonensis SB2B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella amazonensis; 619.6856 379.1025 596.266577 78363353 CadA Metal Resistance Cadmium Thiomicrospira crunogena XCL-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Thiotrichales;family:Piscirickettsiaceae;genus:Thiomicrospira;species:Thiomicrospira crunogena; 831.795 1037.4479 1329.9558 519.9033 1132.7444 1023.4769 1224.8313 1432.7143 1061.7954 1019.6818 256773627 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Streptomyces hygroscopicus ATCC 53653 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces himastatinicus; 724.9855602 1059.1063 813.3379 1369.1896 810.9058 585.9371 74038472 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 1156.4536 484.4476726 835.6424 1189.8629 569.4676172 586.2204 698.5255 553.4526 639.6589 1577.96 647.0545 187425286 obgE Stress Radiation stress Akkermansia muciniphila ATCC BAA-835 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobiaceae;genus:Akkermansia;species:Akkermansia muciniphila; 1968.5435 1727.2024 1904.5999 1839.3995 2443.6187 2491.8223 1467.0651 1316.9933 1526.8261 1691.2705 3140.2319 2279.7072 67917615 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Chlorobium limicola DSM 245 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium limicola; 4743.5083 2205.5197 2874.3254 4906.248 2746.6869 2606.4772 3387.2385 2777.5553 2697.6141 3433.6386 3331.9482 2694.7674 4514409 gyrB other category gyrB Acinetobacter sp. superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter; 791.8474 1005.8081 1127.8134 701.1763 1164.9497 731.3774 761.3364 582.1913 600.1073 808.2596579 812.0212 17431383 nagG Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia solanacearum superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 1295.3167 1864.2231 1800.5844 1641.2922 1703.0213 1913.1336 1879.0183 1664.277 1999.4467 2064.3639 1396.766289 2057.353 150257382 cellobiase Carbon cycling Carbon degradation Cellulose Victivallis vadensis ATCC BAA-548 superkingdom:Bacteria;phylum:Lentisphaerae;family:Victivallaceae;genus:Victivallis;species:Victivallis vadensis; 2883.3232 1273.4782 1571.7765 2172.2631 1993.1591 1095.922 1517.3505 1611.115 1575.6584 1839.1142 2292.5718 1051.5546 114324636 CopA Metal Resistance Copper Arthrospira maxima superkingdom:Bacteria;phylum:Cyanobacteria;order:Oscillatoriales;genus:Arthrospira; 3128.8522 5631.7125 5677.9017 3674.8953 7032.7553 5348.0395 3950.5299 5835.5061 3383.9694 5414.6561 6449.8613 5108.5573 211565154 lip Carbon cycling Carbon degradation Lignin Phanerochaete chrysosporium superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Corticiales;family:Corticiaceae;genus:Phanerochaete; 1658.649778 699.0566 1685.1409 1232.6197 1319.2045 1032.7018 1089.4766 2592.9288 1154.3863 1474.5855 2576.2543 1209.7375 193222324 CopA Metal Resistance Copper Herminiimonas arsenicoxydans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Herminiimonas; 2410.8287 1681.5203 2034.3067 2867.9878 2653.9748 2421.8567 1951.2004 2796.8253 2219.6932 2568.4732 2261.9404 2736.7884 254465405 cat_bac soil_benifit Rhodobacterales bacterium Y4I superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales; 8991.3246 19096.1972 14979.4892 11301.9008 6495.3663 21285.0261 18046.262 13781.6221 23137.2222 16702.5408 6526.6199 17917.2406 104783638 pilin virulence pilin Pseudomonas entomophila L48 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas entomophila; 1809.6461 1358.87245 1363.61475 1673.85125 2285.8375 1357.171 1811.03425 1497.6132 1316.9938 1407.43605 1707.3805 1771.9673 163756344 AceB Carbon cycling Carbon degradation Others Kordia algicida OT-1 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Kordia;species:Kordia algicida; 422.998912 911.6279 839.001 684.8752157 1429.3874 815.6708 835.2311 1328.9456 1068.8972 1169.5979 158316549 CDH Carbon cycling Carbon degradation Cellulose Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 4729.5119 3054.4032 3565.489 4637.6532 3706.4944 3808.7084 3973.1492 4273.3045 3206.7308 3832.1803 4612.4836 3775.1599 90336681 pheA Organic Remediation Aromatics Other aromatics Aurantimonas sp. SI85-9A1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Aurantimonas;species:Aurantimonas manganoxydans; 1266.5716 2159.2005 2063.3711 1641.4429 1111.557713 10531.56247 1914.381 2439.2893 1777.7092 2277.5984 1695.9929 2207.0905 89353179 ChrA Metal Resistance Chromium Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 2134.5398 1662.4957 1549.5021 2476.2659 803.9222 2639.022 1637.9256 1151.9152 1843.0947 1687.5967 1222.0355 1596.001 221084237 nhh Organic Remediation Aromatics Nitoaromatics Variovorax paradoxus S110 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Variovorax;species:Variovorax paradoxus; 489.139925 997.3003 568.7865306 386.2696217 3337.580199 802.6591 616.4215 1427.9531 784.2996 941.5439 598.291 83756978 oxyR Stress Oxygen stress Salinibacter ruber DSM 13855 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Rhodothermaceae;genus:Salinibacter;species:Salinibacter ruber; 4879.3626 2444.621 2868.9749 5042.1548 3233.2834 2834.396 2945.5774 2007.4815 2730.7204 2840.9011 6539.5211 2781.1988 194597665 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria; 368.3022822 795.951 979.5106 410.6648769 1091.3109 640.9769376 520.301 972.8809 538.4837 964.0108 820.6589 241878226 type_III_secretion virulence secretion Desulfovibrio vulgaris RCH1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 10038.7348 10282.4011 9831.0767 8698.668 12288.8126 9134.3434 11649.8399 6730.6897 9391.3958 8291.9933 8398.3527 8298.0875 220908241 cadBD Metal Resistance Cadmium Cyanothece sp. PCC 7425 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 2882.9068 2128.4527 2681.9826 3425.8195 2475.4707 2312.7506 2191.8573 1474.373 2583.3963 3268.3081 3290.1214 2387.3551 6900458 iro virulence Iron oxidation Neisseria meningitidis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Neisseria; 3278.1365 1962.36625 3642.058507 2431.43395 2298.59725 1566.25985 2270.8183 4429.03831 2071.0527 1974.31765 4110.33335 3223.994452 255059844 cytochrome Energy process Energy process Geobacter sp. M18 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 1195.3804 1188.6765 1417.0473 1262.0078 1589.776 1151.0509 1024.7272 712.6269 904.9709 876.7785 1816.212 918.4744 153007680 ureC Nitrogen Ammonification Ochrobactrum anthropi ATCC 49188 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum;species:Ochrobactrum anthropi; 1170.87995 1716.883 1258.6542 1270.29475 2180.64995 1259.7756 1619.59045 964.86785 1206.1134 1328.80195 1891.433 1029.4798 77543329 bphA Organic Remediation Aromatics Polycyclic aromatics Terrabacter sp. HF superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Intrasporangiaceae;genus:Terrabacter; 2809.8485 2613.43435 3496.5355 2539.5074 3057.44315 2611.8913 3211.48595 3745.4977 2906.65425 2775.11955 3325.59375 3442.5144 149828 cellobiase Carbon cycling Carbon degradation Cellulose superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Thermobispora; 1187.5494 1403.9238 1839.623 1131.484 1197.0861 1291.3409 1284.5967 2246.6498 1087.2768 1351.6876 1507.1114 1521.0361 238609818 exoglucanase_fungi Fungi function carbon degradation Moniliophthora perniciosa FA553 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Marasmiaceae;genus:Moniliophthora;species:Moniliophthora perniciosa; 1236.4027 2448.6349 1093.3112 942.7595 2653.2922 768.3687296 1650.8525 957.5811 1011.6635 1069.3774 2022.8236 1033.8673 110678065 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Roseobacter denitrificans OCh 114 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter denitrificans; 3429.87 1592.8576 1798.5198 4108.3397 2891.6325 1735.8716 2932.1572 2107.7412 1843.7587 2068.3056 2274.7696 1960.334 85669952 ureC Nitrogen Ammonification Roseovarius sp. 217 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 8235.0997 5487.0717 5527.1418 7087.9349 6942.9251 6516.2452 5664.1361 9219.3523 5212.0836 7963.2195 9890.4488 6186.7526 148570406 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Roseiflexus sp. RS-1 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus; 16467.41306 18345.96124 34698.4435 11260.67036 46844.437 15782.29787 14654.12585 12518.65279 17340.07222 16510.86495 23640.0416 26409.8055 216962943 catalase_KatG_fungi Fungi function virulence Isaria tenuipes superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Cordycipitaceae;genus:Isaria; 3109.1336 5132.4592 4563.7119 3734.9497 4989.6947 2162.7839 4078.9735 2314.6153 3188.8264 2371.6646 4696.0092 3082.8024 146402860 acetyl_CoA_carboxylase Bioleaching Carbon fixation Acidiphilium cryptum JF-5 3333.641 5588.2986 3503.0564 4110.9286 1871.401 6182.3012 5188.9933 3085.718 6240.4633 6014.2274 3023.6165 5288.4785 302682011 exopolygalacturonase_fungi Fungi function carbon degradation Schizophyllum commune H4-8 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Schizophyllaceae;genus:Schizophyllum;species:Schizophyllum commune; 1669.9928 1177.7689 1201.1505 1057.0654 865.2362 1702.9847 1956.232 1363.9856 1288.9656 579.2010546 187920098 alkB Organic Remediation Other Hydrocarbons Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 1344.4252 1636.9086 2064.1126 1307.1411 1321.2711 1981.1996 1643.0757 1899.2451 2270.8437 1952.3085 1478.1137 1659.4719 85375283 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Erythrobacter litoralis HTCC2594 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter;species:Erythrobacter litoralis; 2552.4454 3254.2702 2468.8773 2065.7511 3349.4168 2772.2227 2666.61 1915.1864 2640.8372 2839.751 1156.5204 2800.7949 158337702 sigma_70 Stress Sigma factors Acaryochloris marina MBIC11017 superkingdom:Bacteria;phylum:Cyanobacteria;genus:Acaryochloris;species:Acaryochloris marina; 4039.7365 1683.6547 2777.95775 3200.2897 2008.194 1838.6288 2082.5632 1691.28765 2080.9485 2521.5295 3619.65485 2705.0667 116754298 trzN Organic Remediation Herbicides related compound Methanosaeta thermophila PT superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanosarcinales;family:Methanosaetaceae;genus:Methanosaeta;species:Methanosaeta thermophila; 1905.2975 1154.1251 1539.5643 2005.71485 1296.02645 1429.40235 1007.41865 1246.3346 1301.7686 1407.36905 2002.82305 1711.41455 119383921 Catechol Organic Remediation Aromatics Other aromatics Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 1711.3553 1896.1262 1438.3041 1455.5675 2504.5357 1631.1926 1617.2447 1585.4781 2052.03 1654.0415 1685013 nbz Organic Remediation Aromatics Nitoaromatics superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1417.9939 1716.2438 1899.3802 827.6866 1098.3828 1525.3918 1380.786 1927.0849 1307.663 1447.1272 1019.363829 1680.9768 206677518 rd Organic Remediation Chlorinated solvents Rhodobacterales bacterium HTCC2083 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 3786.4571 1913.97 4719.4007 4255.0539 1006.4732 1541.1707 2020.5265 3368.1954 2583.0701 1935.8827 2234.6485 4106.6314 225792194 fnr Stress Oxygen stress Acidobacterium capsulatum ATCC 51196 superkingdom:Bacteria;phylum:Acidobacteria;class:Acidobacteria;order:Acidobacteriales;family:Acidobacteriaceae;genus:Acidobacterium;species:Acidobacterium capsulatum; 1312.7787 862.1995 1060.3356 1580.3245 745.5804493 568.7565094 617.5633965 727.5554779 1209.3488 72395058 nifH Nitrogen Nitrogen fixation Methanosarcina barkeri str. fusaro superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanosarcinales;family:Methanosarcinaceae;genus:Methanosarcina;species:Methanosarcina barkeri; 509.5855 786.3303 784.8803 717.642308 776.8212 658.451855 1049.6624 686.3347 861.4714 178465499 CopA Metal Resistance Copper Streptomyces griseus subsp. griseus NBRC 13350 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces griseus; 8193.4999 3784.4497 5432.926 7431.1812 4568.1105 4077.0841 4245.8998 3014.4117 4315.4067 4512.5633 6335.36 5212.3326 54023783 pulA Carbon cycling Carbon degradation Starch Nocardia farcinica IFM 10152 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Nocardia;species:Nocardia farcinica; 2484.2765 2377.9328 2755.37065 1900.75075 1722.07565 1914.517962 2042.9565 3205.169 2377.855437 2122.88165 2178.07055 2714.54885 108764301 Catechol Organic Remediation Aromatics Other aromatics Rubrobacter xylanophilus DSM 9941 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Rubrobacterales;family:Rubrobacteraceae;genus:Rubrobacter;species:Rubrobacter xylanophilus; 3394.2609 1786.2259 1810.7912 3239.9577 2015.1332 2781.9144 3522.0825 2913.4742 3868.9962 1898.8994 2273.3521 1911.0074 157318432 dmsA Organic Remediation Others Shewanella sediminis HAW-EB3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella sediminis; 1071.7496 1814.4634 1127.7697 983.5189 3039.7823 693.5628608 1498.3558 966.853 1003.413128 789.4568 2017.2739 227498029 narI Stress Oxygen limitation Actinomyces urogenitalis DSM 15434 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Actinomyces;species:Actinomyces urogenitalis; 3477.15835 3166.99005 2820.46395 2764.29065 2817.3744 3568.9442 2127.3717 2997.13895 3052.00385 3580.88495 1977.9456 3450.37615 154272852 pheA Organic Remediation Aromatics Other aromatics Ajellomyces capsulatus NAm1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces capsulatus; 602.2673849 627.1631 720.3117 553.3038198 368.9178959 15284.50894 580.4430846 284031116 sid_bac soil_benifit Kribbella flavida DSM 17836 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Kribbella;species:Kribbella flavida; 906.4972396 1375.7627 1239.0259 883.7643 1684.6613 1459.4259 1359.2977 1344.2756 1504.5562 963.194311 1726.1425 84359284 endochitinase Carbon cycling Carbon degradation Chitin Burkholderia dolosa AUO158 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia dolosa; 1096.9217 863.0405 1284.2243 927.6488 830.238 1518.8804 1150.1111 1042.7566 1381.3507 196190485 nhh Organic Remediation Aromatics Nitoaromatics Synechococcus sp. PCC 7335 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 1295.9077 580.3979 840.8621 1570.1747 560.8716461 921.1855 657.8950434 944.8603 1327.984 656.4727208 1066147 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Gordoniaceae;genus:Gordonia; 2951.0757 7285.6579 5086.2901 3630.6386 8009.7402 2903.5689 4293.983 8423.8313 3979.1019 4870.6936 5625.433 4850.3067 126740332 AceB Carbon cycling Carbon degradation Others Roseobacter sp. SK209-2-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 7413.5401 4721.3079 6308.2902 6568.3193 3636.3252 6290.6745 4721.8569 5437.3239 5029.0904 5823.9846 6084.0867 5542.2523 149142751 Catechol Organic Remediation Aromatics Other aromatics Roseovarius sp. TM1035 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 2226.281784 858.5551 810.0384 975.346 1188.1751 911.0324 824.33085 790.99 537.3188 703.9439891 630.6217567 950.3472 212219307 sigma_70 Stress Sigma factors Coxiella burnetii CbuK_Q154 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Legionellales;family:Coxiellaceae;genus:Coxiella;species:Coxiella burnetii; 936.4595 1774.095 1497 1213.3815 1167.9832 1824.368 1525.4141 1708.748 1651.691 1782.1765 1651.1364 109290197 Host_recognition_T4_type Bacteria phage HOST RECOGNITION/STRUCTURAL Aeromonas phage 25 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 936.7953 492.6793838 650.4544 793.2366 1393.2197 588.2797 637.358029 1023.0589 256840974 pstB Stress Phosphate limitation Parabacteroides sp. D13 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Porphyromonadaceae;genus:Parabacteroides; 777.5151 530.1549914 567.9122264 656.2274 458.1209 345.0870755 577.1379 583.6056121 226228636 ahpC Stress Oxygen stress Gemmatimonas aurantiaca T-27 superkingdom:Bacteria;phylum:Gemmatimonadetes;class:Gemmatimonadetes;order:Gemmatimonadales;family:Gemmatimonadaceae;genus:Gemmatimonas;species:Gemmatimonas aurantiaca; 1704.5854 2308.6112 1954.6739 1838.2626 2866.3595 1652.4305 3481.8105 1538.0778 2141.9365 1586.3505 1476.2398 1497.5126 220924464 fnr Stress Oxygen stress Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 3879.1803 6556.4907 6185.7224 4783.614 4345.0516 4893.3384 5534.3734 4640.2939 5714.0246 6612.7379 6167.8845 6102.1751 32453745 motA Bacteria phage Enterobacteria phage RB69 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 916.4856 563.2337 499.4038791 616.553 467.3357064 456.4233 505.4893179 658.957 5083.72602 68304952 narI Stress Oxygen limitation uncultured bacterium BAC13K9BAC superkingdom:Bacteria; 1889.3735 1214.8115 1586.1706 2045.7938 795.1629 1411.7838 1174.7692 1877.2153 2091.3685 1629.9555 1114.141 1484.8102 58270612 AceB Carbon cycling Carbon degradation Others Cryptococcus neoformans var. neoformans JEC21 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Tremellomycetes;order:Tremellales;family:Tremellaceae;genus:Filobasidiella;species:Cryptococcus neoformans; 2830.9104 1218.56415 1703.7151 2951.8303 1528.5936 883.45295 1451.7351 1077.81285 1220.10375 1613.859 3337.305401 1230.96775 88807101 CopA Metal Resistance Copper Synechococcus sp. WH 7805 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 2798.1893 3252.8431 3255.4199 3044.0147 4911.8469 3173.3504 2355.7898 3089.9061 2699.0353 2879.5817 4508.8175 3491.4496 151281422 ahpC Stress Oxygen stress Janthinobacterium sp. Marseille superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Janthinobacterium; 450.8685 7181.297323 610.4258 414.7056406 474.7539709 556.2487 509.8105671 608.5055 567.1998 582.3889 146401540 drug_resistance_transporter Bioleaching Antibiotic Resistance Acidiphilium cryptum JF-5 1632.2525 995.2955 1013.5039 1376.5876 1298.7282 1198.1333 1181.0549 795.1418 1225.4215 1010.72 1586.9932 1475.3898 3668179 lip Carbon cycling Carbon degradation Lignin Pleurotus ostreatus superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Pleurotaceae;genus:Pleurotus; 2676.6002 2369.6056 2994.8869 3450.0093 1746.4955 2979.4122 4558.3602 3410.0036 2619.8574 2354.5687 2838.5069 2068.1878 77862472 mcrA Carbon cycling Methane Methane production uncultured archaeon superkingdom:Archaea; 1041.903 170745152 nmoA Organic Remediation Aromatics Nitoaromatics Methylobacterium radiotolerans JCM 2831 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium radiotolerans; 2075.0347 2452.241 2187.6982 1320.5373 4294.1073 2848.769 1899.2059 1567.939 3555.1039 2806.5978 1161.8298 1468.1391 226424960 phenol_oxidase Carbon cycling Carbon degradation Lignin Trametes sp. C30 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Trametes; 2560.3705 1271.5987 2298.5618 1526.086897 1426.04145 1773.8756 1057.2606 1381.626067 1026.151785 974.5072333 3640.6163 1725.7717 93357836 Catechol Organic Remediation Aromatics Other aromatics Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 3289.3278 1673.1994 1893.2591 2580.326 2046.5112 1895.201 1837.1061 1618.3775 1924.1364 1876.3209 2532.7698 2057.0646 4808507 pchCF Organic Remediation Aromatics BTEX and related aromatics Pseudomonas putida superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 4555.0129 5130.5987 5786.1628 5223.2224 2993.0471 6634.7589 5852.1904 4029.3429 4799.0589 5416.934 4085.7202 4310.9001 77995775 nifH Nitrogen Nitrogen fixation Carboxydothermus hydrogenoformans Z-2901 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Carboxydothermus;species:Carboxydothermus hydrogenoformans; 611.199914 710.9004739 795.4801 1188.7134 159028091 fnr Stress Oxygen stress Microcystis aeruginosa PCC 7806 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Microcystis;species:Microcystis aeruginosa; 974.8893 2019.0834 1096.03 1444.3766 845.0265 2249.9342 1665.11 1379.7781 2021.0672 1338.9801 1379.5243 86558602 pbrT Metal Resistance Lead Synechococcus sp. JA-2-3B'a(2-13) superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 3051.0254 2216.2107 1595.4468 3189.6741 1555.0042 2788.0166 3099.7831 3027.7748 1983.9653 2626.6504 2386.3639 1590.7965 46850250 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1764.077 2301.2927 2171.0796 2165.2089 913.9255 1925.1883 2461.465 2603.1206 2499.687 2431.9969 1688.5212 2089.9124 223937672 CysJ Sulphur sulfite reductase bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3;genus:Pedosphaera;species:Pedosphaera parvula; 819.5851 594.3128 720.417 694.9028 942.0966 1163.7119 535.8319 750.541 1043.0357 830.0741 442.0977465 218264995 pcc Carbon cycling Carbon fixation Parabacteroides johnsonii DSM 18315 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Porphyromonadaceae;genus:Parabacteroides;species:Parabacteroides johnsonii; 783.6447406 949.983 907.2784 1371.4921 706.6098 974.4188 598.8864008 992.0817 987.7395 746.9488756 227489557 pcc Carbon cycling Carbon fixation Corynebacterium pseudogenitalium ATCC 33035 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium pseudogenitalium; 2368.1274 1004.861 1566.6005 1741.3115 1407.8024 1233.4899 1259.7063 1161.7197 899.4144 1151.3279 1032.4117 83369490 amyA Carbon cycling Carbon degradation Starch Rhodobacter sphaeroides ATCC 17025 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 5736.7327 4094.0428 6573.7376 7138.4651 4919.0326 5150.5567 2832.848 4793.4372 4311.9703 6532.222681 5233.5677 4357.5076 71002918 cat_fun soil_benifit Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 1018.3159 675.19615 571.5036 615.2106 1147.22255 518.8785 1147.8601 822.2856 540.033 620.8508667 771.9825101 813.8201667 222480280 CopA Metal Resistance Copper Halorubrum lacusprofundi ATCC 49239 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halorubrum;species:Halorubrum lacusprofundi; 2473.0203 5221.2706 3998.2568 3683.0042 3925.8562 5114.2279 4348.2142 4308.0558 4701.6155 5838.6908 2119.8349 5522.9309 115388485 sulfate_transporter Fungi function Sulfur Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 791.3504 1428.1856 1002.5993 1007.7406 1028.989079 1361.8298 1351.4108 844.9751 1242.4057 1531.4562 815.2027676 1144.4539 167071000 tfdA Organic Remediation Aromatics Chlorinated aromatics Rhizobium leguminosarum bv. trifolii WSM1325 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1229.4179 1522.9392 1301.6474 1294.1285 1660.9501 1600.5471 1311.6779 935.9145 1521.2113 1627.0522 1356.4531 1795.7106 151108 bphD Organic Remediation Aromatics Polycyclic aromatics superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 980.5846 1273.2123 758.1362 687.9492108 865.321482 1156.856621 124514722 LPS_heptosyltransferase_EPS Bioleaching EPS Leptospirillum sp. Group II UBA 404.6368557 939.7125 688.5195848 456.8117689 1432.5636 776.4407 855.8854 838.6768 778.1675 686.4938 158109431 alkB Organic Remediation Other Hydrocarbons Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 9263.1943 3208.0402 4658.4221 6949.6721 4671.6865 4927.9024 5070.9303 6303.7115 5738.7553 6042.4115 8842.0631 4948.493 121589518 fccAB Sulphur sulfide oxidation Halorhodospira halophila SL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Halorhodospira;species:Halorhodospira halophila; 1233.2595 1955.4725 995.9838 983.2768 2490.9038 779.9255 1835.7641 1133.1415 1093.94 843.9379 1636.4118 2354.2326 78223264 pimF Organic Remediation Aromatics Aromatic carboxylic acid Geobacter metallireducens GS-15 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter metallireducens; 1696.3917 1345.22515 1608.61235 1518.86375 2027.10615 1439.96395 1430.6872 1207.9459 1243.30265 1425.28005 2426.2567 1817.26345 67542206 CopA Metal Resistance Copper Burkholderia vietnamiensis G4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia vietnamiensis; 584.8052977 569.7065995 479.1917 2091.24251 407.5601375 411.9973 603.0012 55978091 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1317.5337 1307.3989 2365.5307 1270.7057 2084.4682 1226.0417 1223.403 1073.7216 1117.6688 816.9821 1675.4758 1237.1335 213964973 alkK Organic Remediation Others Corynebacterium amycolatum SK46 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium amycolatum; 1476.6259 1485.4252 1685.4026 572.6113 870.961626 1577.8435 1599.7068 2895.9351 1632.0859 1480.0906 1740.0122 158315414 atzA Organic Remediation Herbicides related compound Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 547.9168 941.4327 806.0836 916.39865 944.9226452 999.6708 1063.84065 1475.149791 934.2214 898.8936 2269.7244 924.5853 187926706 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 1376.9582 1075.2423 1234.9403 1238.4343 1963.4874 1494.193 1027.5489 1347.8471 1424.7115 1496.5946 1249.3553 262173223 hly virulence hemolysin Vibrio mimicus MB-451 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio mimicus; 2001.8018 1103.827083 967.399 1057.749803 818.3936164 762.1883 1817.2691 254556180 gdh Nitrogen Ammonification Lactobacillus plantarum JDM1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus plantarum; 380.9824439 581.6339 391.5157658 877.7317 495.8720948 861.7353 472.0061 520.8472 687.1516433 416.1176 86158916 cytochrome Energy process Energy process Anaeromyxobacter dehalogenans 2CP-C superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter;species:Anaeromyxobacter dehalogenans; 654.6096 1303.5507 1694.737 791.0732 1326.8172 1279.7677 1000.9628 1596.3586 1612.815 1359.9831 186476427 fnr Stress Oxygen stress Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 1740.2481 1604.2113 2837.5987 921.501 1269.5053 2111.6285 1767.2983 2577.2175 2077.0985 1988.0635 2036.2876 78102023 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 6044.198 5754.4615 2752.0629 5123.34 4656.6515 3554.7357 2505.9809 2716.2593 3902.9528 2649.162 7212.4743 2438.1098 119459513 nahA Organic Remediation Aromatics Polycyclic aromatics marine gamma proteobacterium HTCC2080 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 2086.5999 719.279 1042.6265 1321.4002 1114.5553 988.1769 936.0394 964.8558 937.984 1049.5234 824.8606573 747.8088 28268547 phenol_oxidase Carbon cycling Carbon degradation Lignin Coprinellus congregatus superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinellus; 416.4707779 663.5903 437.0344889 1123.2679 241518329 sigma_24 Stress Sigma factors Rhizobium leguminosarum bv. trifolii WSM1325 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 3622.7443 3393.9031 1975.5817 3313.3902 2664.3835 2424.8929 2123.8847 4279.5624 2407.6022 2012.4064 4061.3112 2533.1651 299754938 aflatoxin_aflQ Fungi function toxin Coprinopsis cinerea okayama7#130 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis;species:Coprinopsis cinerea; 641.9295 1210.2752 838.1868 1281.6646 877.1564 809.9931 919.731 1046.9947 750.6981 432.7048516 150836261 sigma_38 Stress Sigma factors Marinomonas sp. MWYL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Oceanospirillaceae;genus:Marinomonas; 515.0778406 1120.1088 482.1247569 851.1504 616.4683 677.5119 472.0087151 508.8007455 443.241 1134.1959 70984924 endochitinase_fungi Fungi function carbon degradation Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 485.9268 258.0501293 520.3056272 388.8532036 15491.13357 337.2473644 368.5597517 670.118201 482.8140234 163746160 AceB Carbon cycling Carbon degradation Others Oceanibulbus indolifex HEL-45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 1621.332 17752.71736 3105.2997 1910.2294 1720.6916 1440.3653 2129.3216 3917.3541 1736.9845 2238.2366 1680.929272 2760.495 189409688 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria; 587.0485043 523.0564 499.6655907 790.0458 701.4067951 547.8488 415.8427198 601.2225383 442.2868 634.9243 828.5604459 630.2873 211905647 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2813.3275 808.9356 1853.8571 3093.6545 1298.7282 1456.3386 1750.1617 2020.1426 1531.7885 1866.6842 1458.9901 2106.35 163846446 CopA Metal Resistance Copper Chloroflexus aurantiacus J-10-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aurantiacus; 2332.1289 2774.9463 3047.0982 2899.2729 4101.7249 2029.2991 3706.7991 2572.4847 2512.8387 2083.4697 2019.2199 2538.5757 37791153 phenol_oxidase Carbon cycling Carbon degradation Lignin Volvariella volvacea superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Pluteaceae;genus:Volvariella; 904.8533 696.5876 671.3749431 822.5809 1156.956 2475.76106 644.4658 761.9985 163847633 hrcA Stress Heat shock Chloroflexus aurantiacus J-10-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aurantiacus; 1135.7948 736.7303 1100.9797 558.179534 675.2867 562.4613 539.4257091 939.2070969 157411558 napA Nitrogen Dissimilatory N reduction uncultured prokaryote 501.065 810.898 567.7833028 670.987 1111.8378 522.553917 990.9015 612.2681 479.7929169 220921224 sigma_24 Stress Sigma factors Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 2096.3518 1923.7436 1914.9375 2840.264 1462.4248 2415.2012 2582.0744 2755.9492 2101.305 2601.0458 1627.3305 1483.3271 242133450 pstC Stress Phosphate limitation Dickeya dadantii Ech703 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Dickeya;species:Dickeya dadantii; 347.36121 480.1024504 391.2144207 392.6498589 623.5395 440.7841 474.7751 570.3456 209907898 dmsA Organic Remediation Others Enterobacter cancerogenus ATCC 35316 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter;species:Enterobacter cancerogenus; 2446.5721 2529.6903 2804.9721 2123.9519 3625.2338 2134.1875 2004.2273 2381.213 1961.6459 2529.9936 1817.0048 2955.0092 2196816 gyrB other category gyrB Shewanella putrefaciens superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella; 2618.0622 2482.2243 2850.4516 3384.7543 3121.1567 3104.8805 2120.8336 2912.6632 2327.0847 2375.4946 4279.7909 2796.6065 154299780 glx Carbon cycling Carbon degradation Lignin Botryotinia fuckeliana B05.10 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Botryotinia;species:Botryotinia fuckeliana; 1044.2134 1076.6822 1128.5694 797.2644 1788.2065 1069.8981 700.9456 762.4844 905.763 916.0509 1205.3144 1008.3801 157913045 phzF soil_benifit Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 4394.9268 3703.709367 8142.5481 3706.332356 3852.589868 7501.1318 3367.3491 3894.1018 1743.17595 3260.892869 7730.5889 8163.1534 214031971 ppx Phosphorus Phosphorus utilization Ruegeria sp. R11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 4508.415383 1895.56975 5545.4325 3661.822316 2769.2677 4091.3225 2587.781882 4745.0201 2231.9653 3249.369096 5261.5563 2638.140097 121621831 DNA_polymerase_type_I Bacteria phage REPLICATION Erwinia amylovora phage Era103 superkingdom:Viruses;order:Caudovirales;family:Podoviridae;genus:SP6-like viruses; 2040.8898 1421.49575 2319.237 1957.6229 2822.1648 2179.1162 1521.4454 1739.3719 1857.1899 2112.6588 4260.1628 2414.7099 149815633 vanA Carbon cycling Carbon degradation Others Plesiocystis pacifica SIR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Nannocystaceae;genus:Plesiocystis;species:Plesiocystis pacifica; 2718.1194 4406.1335 3377.1445 3947.9143 2778.5958 4753.9608 3682.5625 2559.5211 3787.5119 4497.0531 2402.3162 3845.9365 119377455 sox Sulphur Sulphur oxidation Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 2261.5959 1546.4492 1986.37 2420.7225 2422.7632 1546.1362 1714.7417 2123.9851 1857.0501 2127.9233 2538.0312 2303.6701 253985412 phoA Stress Phosphate limitation Methylovorus sp. SIP3-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Methylophilales;family:Methylophilaceae;genus:Methylovorus; 4213.7251 3482.6168 4922.0811 2456.3086 3004.3849 2338.1015 2878.6142 6876.0741 3204.6573 3027.7828 5065.1071 3532.0699 269793869 sigma_70 Stress Sigma factors Sanguibacter keddieii DSM 10542 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Sanguibacteraceae;genus:Sanguibacter;species:Sanguibacter keddieii; 1399.0141 1356.1519 1316.9284 1544.3959 2597.153 998.0331 2251.0207 1112.661 1025.782 1150.5575 1187.3199 1250.5912 219952231 nitA Organic Remediation Aromatics Other aromatics Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 2915.19135 5271.0217 4279.7921 3614.5371 5572.92795 3884.4321 3823.9158 3186.33475 4732.9978 3408.609 5074.5128 3284.4001 145299761 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Aeromonas salmonicida subsp. salmonicida A449 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas;species:Aeromonas salmonicida; 1590.0616 2797.4751 2872.4353 1399.5172 1808.9862 2596.5163 2662.2398 3070.4908 3237.8918 3314.1129 3018.6586 20516009 ArsC Metal Resistance Arsenic Thermoanaerobacter tengcongensis MB4 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Caldanaerobacter;species:Caldanaerobacter subterraneus; 693.862748 625.0171219 856.459 801.0002 648.2347 148263597 CopA Metal Resistance Copper Geobacter uraniumreducens Rf4 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter uraniireducens; 4474.7818 5193.7254 4912.6595 4502.2258 6779.1905 4821.982 6209.121 3834.5851 5048.3112 4084.2183 5597.0839 3792.449 27349191 B_lactamase_A Antibiotic resistance Beta-lactamases Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 674.6909 862.0593 820.0851 1023.7119 1115.5412 1118.491 2249.6099 591.9231 1018.4316 638.7431047 562.9145439 256691432 pstA Stress Phosphate limitation Halorhabdus utahensis DSM 12940 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halorhabdus;species:Halorhabdus utahensis; 1263.9254 1158.492297 1591.2158 1140.4833 2540.2934 1259.9775 1650.5543 981.136 1309.8297 1066.1391 1828.5606 1565.4465 146284583 ArsC Metal Resistance Arsenic Enterobacter sp. 638 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter; 685.8531 489.2886 645.6259 530.4358546 668.4563 903.4525 909.1761 434.2128254 648.4357 502.6297359 161380031 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 3894.2245 7941.0967 4581.0575 4337.8692 11823.7352 5810.6674 4809.6041 5913.5544 5969.8352 6132.6588 5601.1201 5362.7568 163743362 ureC Nitrogen Ammonification Phaeobacter gallaeciensis 2.10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 29137.6751 17120.3366 19207.8963 26245.8092 19547.2054 20907.0508 22042.7264 17451.4196 20363.2261 20003.9686 22603.6923 20581.1514 60476002 rubisco Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 11160.1839 11626.9955 7497.8092 8331.1086 11907.4415 9285.6412 8856.461 9692.0968 9625.4695 8288.4089 12767.8275 8312.3142 284013168 sid_arc soil_benifit Haloterrigena turkmenica DSM 5511 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloterrigena;species:Haloterrigena turkmenica; 3855.2439 1235.4162 2366.6938 3402.0132 2590.2138 1429.324579 1458.233 1127.634207 2250.8424 2704.7486 6791.178166 2529.8694 163262654 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Bordetella petrii superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella; 1763.7681 2082.3247 2289.7654 2049.2045 2255.578 2114.1311 1519.0137 1509.9838 1918.708 1707.6963 2659.5957 1963.616 71734408 chnB Organic Remediation Other Hydrocarbons Pseudomonas syringae pv. phaseolicola 1448A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas savastanoi; 4456.304485 1737.79145 2565.115298 4057.426787 2768.58515 2437.35145 2850.749008 2308.624342 2359.4804 3225.243987 3479.5554 2607.84855 84502849 PobA Organic Remediation Aromatics Aromatic carboxylic acid Oceanicola batsensis HTCC2597 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola batsensis; 17834.6521 19667.8537 7475.8109 15872.0618 17121.6172 11499.5009 14287.9808 10180.7463 6900.431009 6972.456116 19398.3537 11296.6831 75674788 CysJ Sulphur sulfite reductase Nitrobacter winogradskyi Nb-255 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter winogradskyi; 7688.3515 5467.3845 5533.292 6234.4285 7124.0834 5677.6163 7366.0425 4727.9288 5078.3654 5456.5191 7092.7356 5260.7941 146407972 ureC Nitrogen Ammonification Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 4028.937 6031.2298 5537.2322 4715.3182 2119.8278 5659.6538 8015.8195 5063.6166 4731.7513 4719.8796 4269.8207 2838.861 160867143 amyA Carbon cycling Carbon degradation Starch "Salmonella enterica subsp. arizonae serovar 62:z4,z23:--" superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 576.8577646 1061.1618 663.5208 1346.6162 620.3758 648.0859 227958442 AceA Carbon cycling Carbon degradation Others Thermomonospora curvata DSM 43183 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Thermomonosporaceae;genus:Thermomonospora;species:Thermomonospora curvata; 15096.7201 13351.6494 16108.6159 12844.5663 6918.6758 18323.4718 11404.7212 15085.5549 16171.0884 15105.4816 14994.1634 15670.903 38004658 nahA Organic Remediation Aromatics Polycyclic aromatics Pseudomonas fluorescens superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 907.7278 586.77 652.0149029 502.006 456.8946 424.6041495 153011803 glnA Stress Nitrogen limitation Ochrobactrum anthropi ATCC 49188 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum;species:Ochrobactrum anthropi; 3789.6272 1919.9335 1857.2448 3202.0293 2324.8183 2194.0874 3395.1071 1490.278 1897.0642 2192.9009 2629.3968 1820.2915 262222290 pilin virulence pilin Grimontia hollisae CIP 101886 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;species:Grimontia hollisae; 697.2034 545.9388746 2706.399601 359.8387565 520.8662336 198243036 dmsA Organic Remediation Others Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 12760.4944 8525.2537 9971.9353 12915.136 8285.4687 10866.5957 8541.3624 8133.0907 11449.8327 11198.1846 10906.233 10570.8598 86738831 Catechol Organic Remediation Aromatics Other aromatics Frankia sp. CcI3 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 6865.7038 21766.64921 5989.1485 8022.2157 4826.984 6644.7945 5845.6409 6429.8985 6633.813 6344.1067 6390.6646 6804.2414 238708757 B_lactamase_C Antibiotic resistance Beta-lactamases Yersinia rohdei ATCC 43380 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia rohdei; 550.8451 667.7481 849.3667526 640.9809364 476.4612 56314383 pilin virulence pilin Aromatoleum aromaticum EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 6182.7655 5577.0596 4159.2234 7493.6967 5803.0588 4098.2622 4319.0798 4568.5761 5148.5037 4476.6855 4962.6182 4079.4001 227114081 sir Sulphur sulfite reductase Pectobacterium carotovorum subsp. brasiliensis PBR1692 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium carotovorum; 633.7895 575.4595513 533.8497851 544.8291015 112463151 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 478.6895375 386.9031691 424.1181773 599.9117 779.574 586.9725 516.7496706 1019.2836 169657240 nirS Nitrogen Denitrification Thauera sp. 63 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Thauera; 3549.4308 2320.7888 2325.2563 3418.7789 2867.1747 2695.0782 1951.1545 2336.1609 2217.5614 2306.4078 3371.4207 3511.5538 111019986 tftH Organic Remediation Aromatics Chlorinated aromatics Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1579.9337 3466.5697 1691.2911 1200.4785 3802.0505 2392.4826 4016.3002 1023.1015 3185.4482 2199.8017 2996.1563 1191.6795 305658263 sped_bac soil_benifit Corynebacterium matruchotii ATCC 14266 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium matruchotii; 2095.8548 3753.5363 3235.7044 2492.1003 2903.1978 4136.0866 2823.9356 3510.7595 3668.2035 3514.7852 2528.9018 3577.7712 154156259 alkH Organic Remediation Other Hydrocarbons Parvibaculum lavamentivorans DS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Parvibaculum;species:Parvibaculum lavamentivorans; 14644.1591 11981.1748 10880.9875 14146.7078 8193.8373 13644.8607 17555.6193 14265.6356 11919.0868 13285.864 11753.821 9609.87 206581044 CueO Metal Resistance Copper Klebsiella pneumoniae 342 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella pneumoniae; 1392.7009 716.38645 1180.1991 1199.1498 1224.9756 1137.0742 794.3821 1153.03485 903.71865 814.40825 1660.1241 1066.65335 167350933 pstB Stress Phosphate limitation Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 5732.797 6322.3207 7361.516 6105.3019 7203.3912 6770.4573 6430.267 8131.1298 7298.1052 8876.5904 6928.6956 8038.7658 90020547 ArsC Metal Resistance Arsenic Saccharophagus degradans 2-40 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Saccharophagus;species:Saccharophagus degradans; 1640.3924 1160.8034 1422.0359 873.6643 420.7468377 446.6189062 605.4335931 883.8826 146276891 sigma_70 Stress Sigma factors Rhodobacter sphaeroides ATCC 17025 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 6485.3459 2222.1105 4377.4902 5537.7586 3621.6695 3475.2879 2703.2344 5745.8255 3917.9683 3873.3622 6189.0021 4015.7507 209900680 TerC Metal Resistance Tellurium Enterobacter cancerogenus ATCC 35316 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter;species:Enterobacter cancerogenus; 1088.4056 2165.5718 1610.0445 1473.1825 1342.6764 1056.243 1070.0117 2740.1168 1192.1754 1444.9497 2085.5278 1911.8725 16420018 dmsA Organic Remediation Others Salmonella typhimurium LT2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 2231.521 1128.1112 1670.5433 2273.6659 2457.99 1819.2978 1646.0694 1653.4436 2006.4128 1608.1474 1494.1622 2109.3711 219965718 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 495.2247908 1435.2322 1206.0794 495.3702435 2439.5234 925.1212 1455.1475 636.0674 988.7035 639.9827 1509.0094 721.4976 77920456 nrfA Nitrogen Dissimilatory N reduction Pelobacter carbinolicus DSM 2380 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter carbinolicus; 1382.5998 3490.772 2039.948 1842.139 2392.1056 2693.1488 2362.4196 1364.0184 3942.699 2526.4539 1421.5358 2374.584 223454186 pcc Carbon cycling Carbon fixation Bifidobacterium breve DSM 20213 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium breve; 1486.9822 3395.6744 1580.3548 1237.8727 3062.6855 1561.0027 2211.219 1279.0585 1429.872 1535.5766 2075.3413 1273.2222 157322214 sod_CuZn soil_benifit Serratia proteamaculans 568 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Serratia;species:Serratia proteamaculans; 1994.9245 1961.1939 2495.5428 1623.5402 2363.9507 2102.5849 1887.2654 2513.7548 2005.4692 2129.0399 2728.0658 2335.8725 119378250 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 3173.3937 8289.7458 4794.7734 4032.387 8984.4689 5857.5554 7317.6841 3273.1284 6269.2828 4463.9445 4401.3314 3353.7691 196478318 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Phenylobacterium zucineum HLK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Phenylobacterium;species:Phenylobacterium zucineum; 2082.42245 1989.3422 1758.51445 2193.0217 1511.18875 1394.8384 1533.03605 1485.96895 1325.5674 1561.3544 2273.472035 1401.5441 187919760 B_lactamase_C Antibiotic resistance Beta-lactamases Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 521.4044891 741.107 559.6847829 405.9118429 1205.087 452.9029942 619.4841 763.2616 498.2916 591.2854808 139478521 mer Metal Resistance Mercury uncultured soil bacterium superkingdom:Bacteria; 3395.6176 2482.8274 2001.1857 2496.5109 1890.9672 1434.0388 2178.7812 1388.5416 2961.90809 1982.5361 2776.8598 2145.9953 112441755 mcrA Carbon cycling Methane Methane production uncultured methanogenic archaeon superkingdom:Archaea;phylum:Euryarchaeota; 2516.3931 1600.1719 1996.2278 1731.1617 1495.7178 1973.901 2024.3346 2350.7224 1943.5668 1652.8467 2654.4304 1792.2912 115253427 tftH Organic Remediation Aromatics Chlorinated aromatics Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 3481.1007 3032.5243 3128.9943 3943.3667 4479.9297 3844.5288 2985.8838 2802.5385 3054.9452 3587.0879 5892.1301 3954.422 56477216 BADH Organic Remediation Aromatics Other aromatics Azoarcus sp. EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 1690.3203 2144.3427 1266.68 2223.2042 1379.0029 2516.8292 1710.9565 1329.6301 1875.968 1944.8717 968.7920431 1952.9048 108804102 nitA Organic Remediation Aromatics Other aromatics Rubrobacter xylanophilus DSM 9941 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Rubrobacterales;family:Rubrobacteraceae;genus:Rubrobacter;species:Rubrobacter xylanophilus; 2741.9886 2341.9797 1735.5348 2748.0385 3330.2614 2324.6857 1639.0611 2555.9261 2289.5868 1991.4841 3762.8775 3014.7861 229748947 ara Carbon cycling Carbon degradation Hemicellulose Stackebrandtia nassauensis DSM 44728 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Glycomycetaceae;genus:Stackebrandtia;species:Stackebrandtia nassauensis; 1256.4705 2822.8583 1883.3723 2100.6113 2046.1889 3120.5397 2452.0709 2021.0383 2977.3749 2936.8656 1011.2196 2568.9516 77383659 atzB Organic Remediation Herbicides related compound Pseudomonas fluorescens PfO-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 6864.1994 2933.3235 3898.5595 5245.2617 1748.6 1796.9531 4119.5093 3333.0083 2436.41 3548.988 3193.1581 2962.1912 217977446 mmoX Carbon cycling Methane Methane oxidation Methylocella silvestris BL2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Methylocella;species:Methylocella silvestris; 2065.2023 1956.0969 1509.7802 2255.6673 1148.7014 2196.6749 2879.0386 2235.9617 1713.5003 1760.1898 1794.0132 1466.7384 223938480 pstC Stress Phosphate limitation bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3; 1727.9979 3959.902 3653.6273 1696.959 1968.9857 3545.2684 3956.2536 3864.3132 4732.3221 3943.1748 1139.559 4060.8752 114706574 sox Sulphur Sulphur oxidation Fulvimarina pelagi HTCC2506 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Fulvimarina;species:Fulvimarina pelagi; 5903.9379 2055.8711 2845.26302 3742.27335 2336.11815 2727.8125 2591.97895 2645.068 2699.108859 3121.334614 4103.4984 2873.43215 116665020 ArsC Metal Resistance Arsenic Methanosaeta thermophila PT superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanosarcinales;family:Methanosaetaceae;genus:Methanosaeta;species:Methanosaeta thermophila; 2451.5689 5656.7643 3149.6742 2500.6612 7583.6626 4356.4077 5148.0217 2751.3617 4158.6819 3334.8378 4246.3967 3143.8427 242132382 ahpC Stress Oxygen stress Dickeya dadantii Ech703 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Dickeya;species:Dickeya dadantii; 605.7732347 1580.4846 967.0066 764.5 936.0685576 1472.3119 1257.8252 803.1911 1475.5591 1905.9119 1664.3744 145224645 glnA Stress Nitrogen limitation Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 2628.8349 1705.8586 684.2718 2210.9586 2359.135 910.2696 2543.1215 1447.7073 868.6495 1540.9142 1679.6802 1588.613 229209337 B_lactamase_C Antibiotic resistance Beta-lactamases Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiopsaceae;genus:Nocardiopsis;species:Nocardiopsis dassonvillei; 5887.2684 6915.372 9492.6557 6236.4283 6083.4893 5401.0446 4850.9313 12304.0051 6035.5469 5847.3671 13490.3914 8857.9828 78697610 atzD Organic Remediation Herbicides related compound Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1559.337515 726.2365 1018.0581 1798.5672 1116.8309 1067.97 1149.1675 1377.9993 1128.8834 1047.6821 184199505 nirK Nitrogen Denitrification denitrifying uncultured denitrifying bacterium superkingdom:Bacteria; 1163.2101 1749.8459 1372.92 1526.6987 1012.1927 2114.1012 1568.4963 1408.9373 1976.079 1904.6836 607.8704594 1704.8161 89343006 CopA Metal Resistance Copper Mycobacterium flavescens PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 2333.8214 2387.0756 2559.1094 3977.0764 3558.9134 2441.4495 1808.0061 2457.5183 2083.9326 2200.3042 3644.6284 3331.5364 188595290 nrfA Nitrogen Dissimilatory N reduction Porphyromonas gingivalis ATCC 33277 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Porphyromonadaceae;genus:Porphyromonas;species:Porphyromonas gingivalis; 2142.1559 4232.822 3265.4521 2588.4761 3826.622 2545.964 2556.2893 1699.7546 2144.709 2266.3984 4088.6512 7368.002774 226939965 ureC Nitrogen Ammonification Laribacter hongkongensis HLHK9 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Laribacter;species:Laribacter hongkongensis; 1356.5277 897.1269 1203.538922 702.7915514 994.3879873 1303.0516 987.2081 1300.962295 1058.104724 1220.2026 42741696 pstA Stress Phosphate limitation Alcaligenes faecalis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Alcaligenes; 1811.3184 1781.3073 1906.0248 1692.247 2924.8307 1626.3168 1781.0511 2179.0596 1656.9913 2098.816 1880.2375 2243.1654 19909613 gyrB other category gyrB Methylococcus capsulatus superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae;genus:Methylococcus;species:Methylococcus capsulatus; 2395.489 3048.8347 3849.2706 2241.3397 2968.8358 2575.6971 2483.7057 3423.0399 2403.3154 2552.6169 4200.5578 3875.5297 27354699 pobA Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 4314.8367 3654.07425 4409.2662 3380.56285 2505.8913 4096.101 5000.64075 4740.136 3314.30875 4037.8384 3827.9722 3407.22915 258558398 SMR_antibiotics Antibiotic resistance transporter Nakamurella multipartita DSM 44233 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nakamurellaceae;genus:Nakamurella;species:Nakamurella multipartita; 1329.9989 2169.7386 2274.5426 1616.2668 714.7163658 1130.5757 1857.9245 2198.5716 1783.5453 2114.0992 981.3809341 2204.8659 91786345 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 1086.0415 633.4085146 925.2056 901.3656 498.8483743 556.410727 839.7097 732.3453 956.2166 189419948 pstA Stress Phosphate limitation Geobacter lovleyi SZ superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter lovleyi; 2661.3276 2004.2128 1171.0974 1405.1606 2812.4575 1536.8334 1930.2787 1898.5915 2305.7905 2138.9669 1055.8092 1265.3947 12659194 nifH Nitrogen Nitrogen fixation Treponema sp. ZAS-2 superkingdom:Bacteria;phylum:Spirochaetes;class:Spirochaetes;order:Spirochaetales;family:Spirochaetaceae;genus:Treponema; 2728.0324 1758.6638 2949.2329 1856.8091 1830.2967 2184.9192 1803.9342 2682.0284 2211.0613 2242.5804 2588.9393 2362.6643 172065187 cap virulence capsule Burkholderia ambifaria MC40-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ambifaria; 5624.0491 5064.656 5965.6527 3114.4473 1685.6544 5949.9852 4590.2933 6922.0945 6109.7623 5888.0019 2815.8517 7023.1487 110835291 ahpF Stress Oxygen stress Alcanivorax borkumensis SK2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax;species:Alcanivorax borkumensis; 820.4313 2268.4552 751.9677 1305.084514 1445.7197 1990.8186 3015.8763 1384.6174 821.2329425 238940457 katE Stress Oxygen stress Zygosaccharomyces rouxii superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Zygosaccharomyces; 1262.4345 1887.7458 2039.0465 1727.2031 2279.8767 2321.8494 684.3756 1688.6298 2007.4038 1467.302518 17928.16179 114737418 exaA Organic Remediation Chlorinated solvents Hyphomonas neptunium ATCC 15444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Hyphomonas;species:Hyphomonas neptunium; 6749.0846 4781.5037 4739.596 3323.5537 3108.2073 4470.1951 6846.4298 4038.9658 4356.3527 7554.6838 3873.8472 4852.243 74317157 pstB Stress Phosphate limitation Thiobacillus denitrificans ATCC 25259 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Hydrogenophilales;family:Hydrogenophilaceae;genus:Thiobacillus;species:Thiobacillus denitrificans; 1847.9483 1661.026067 1650.464233 1419.91285 2232.2388 1791.9203 1345.595333 2523.5996 1847.95815 1533.0344 2976.5763 1613.431933 119698429 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria; 6712.9383 1897.2008 3672.6159 5309.3524 3318.753 2330.414 3468.2527 3021.2022 2502.2265 3210.4101 6072.4347 3813.9401 302561668 lgrD soil_benifit Streptomyces griseoflavus Tu4000 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces griseoflavus; 2190.8614 748.7143 705.0510338 1766.7342 1073.6027 509.0933565 673.5776 806.1732131 797.7658 791.3439 2380.7902 843.7842 212678704 nitA Organic Remediation Aromatics Other aromatics Providencia rustigianii DSM 4541 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia rustigianii; 15013.13243 863.764171 478.4489 226090340 MATE_antibiotic Antibiotic resistance transporter Gemmatimonas aurantiaca T-27 superkingdom:Bacteria;phylum:Gemmatimonadetes;class:Gemmatimonadetes;order:Gemmatimonadales;family:Gemmatimonadaceae;genus:Gemmatimonas;species:Gemmatimonas aurantiaca; 1726.80245 998.08615 1782.87535 1155.3109 1224.0371 1021.13305 1097.4714 2706.893421 1200.452 1427.93765 2194.6235 1464.52755 223470324 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2426.2759 1568.6468 959.6206 2070.3261 1734.7217 1805.2389 1137.3304 1010.3436 1708.9456 1500.1567 3427.422 1376.613 126032287 endochitinase Carbon cycling Carbon degradation Chitin Hypocrea jecorina superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Hypocreaceae;genus:Hypocrea; 3359.6593 1868.4536 2028.63625 3126.69975 4335.896026 1980.8332 1975.43705 2169.34585 2824.8088 1853.0779 2549.4789 2408.99725 223895391 acetylglucosaminidase Carbon cycling Carbon degradation Chitin bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3;genus:Pedosphaera;species:Pedosphaera parvula; 3730.6997 3562.5509 5440.7046 3837.1698 4478.1096 3632.4187 2942.5034 3319.1973 2923.254 2994.2165 6026.2835 4329.425 78065954 mhpA Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia sp. 383 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1032.0974 984.4411 768.4479 412.6006173 430.9058 615.45 447.5769352 90335637 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Aurantimonas sp. SI85-9A1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Aurantimonas;species:Aurantimonas manganoxydans; 1808.6991 1258.544 1397.3754 976.25 1546.3587 1289.3517 1463.1766 1891.8252 1250.921 1513.9249 1116.6155 1407.1263 226721767 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Azotobacter;species:Azotobacter vinelandii; 5530.5066 3611.6352 4717.5106 5509.9527 3086.8778 3674.2813 2972.2227 3545.7409 4682.7443 4934.0632 3672.5691 5222.8379 33571927 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Bordetella pertussis Tohama I superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella pertussis; 1850.9706 3142.1867 2001.3166 2097.0911 3055.2533 2669.832 5402.2708 1617.3366 3853.5846 2027.6039 1661.1091 1481.281 126704462 nagG Organic Remediation Aromatics Aromatic carboxylic acid Rhodobacterales bacterium HTCC2150 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 594.6478 573.8773 167563648 pcpB Organic Remediation Herbicides related compound Burkholderia oklahomensis EO147 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia oklahomensis; 1363.2439 1681.7242 1583.1319 1285.8551 1443.0671 1740.538 1748.7165 2329.9151 1674.1036 1835.5745 1635.1626 1662.0536 119373372 nitA Organic Remediation Aromatics Other aromatics Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 3076.0498 3754.6067 3449.2894 2861.8102 5922.6745 2875.8249 2788.1485 2484.9708 2822.5373 2604.9875 4823.9242 3611.7175 116743228 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2043.6972 1823.2175 1766.1404 1783.6369 2913.8531 1984.3105 1402.0174 1384.8619 1340.4897 1597.6286 2934.1729 1508.1826 169793474 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3449.5483 2189.609695 3513.2341 4157.9659 2857.8656 4098.7557 2919.9644 3060.3474 3257.3222 3872.4354 4346.7475 4600.0621 94555598 clpC Stress Protein stress Deinococcus geothermalis DSM 11300 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus geothermalis; 5875.6092 6516.680046 5185.33305 5504.80925 6206.641 4374.5497 5217.72625 3630.38605 4970.8807 5143.83055 6043.17275 5291.30735 1480205 nmoA Organic Remediation Aromatics Nitoaromatics superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Aminobacter; 1283.6441 539.8092413 846.3016 920.7496 653.4648672 651.9867 636.643276 77457025 iro virulence Iron oxidation Pseudomonas fluorescens Pf0-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 951.9872 923.4170521 1005.9599 3202.8912 1001.2936 2473.5087 538.6794166 990.6838 814.626 254509850 glnA Stress Nitrogen limitation Rhodobacteraceae bacterium KLH11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 595.7526831 1813.1637 1934.3622 1180.3431 1027.503981 1185.226 1954.9512 1847.0273 1303.8188 2119.2805 1596.4954 145231462 cutinase_fungi Fungi function carbon degradation Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 4547.8401 3090.5284 1962.7579 2949.762 3465.6894 1971.9267 4221.6402 2180.9357 1453.3912 2554.4482 3186.8156 2858.869 163852109 CopA Metal Resistance Copper Methylobacterium extorquens PA1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 1300.7971 1679.163 1442.9567 1288.6494 1370.8313 1230.2743 2405.3526 1138.2011 1518.8699 1069.5337 1387.0365 1173.9785 124898361 hrpB2 soil_borne_pathogen secretion system type III Burkholderia dolosa AUO158 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia dolosa; 593.0762 426.7594444 225.1150329 373.1268285 1001821 nreB Metal Resistance Nickel Synechocystis sp. PCC 6803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechocystis; 415.5573764 842.2319 429.9783579 533.3522778 816.8752 452.7361 563.7037 558.3671 68164638 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 742.1747 6071.910623 735.3054 829.6043 729.1445472 807.2806 1188.8317 656.2694 683.1169 629.3858 865.6304055 689.5561 134050997 hly virulence hemolysin Desulfotomaculum reducens MI-1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfotomaculum;species:Desulfotomaculum reducens; 1041.4463 876.6113 1044.0805 1018.3425 1853.0102 1184.5081 719.1145 753.6362 807.877 1088.0142 1584.3505 1327.204 227192411 NiR Nitrogen Assimilatory N reduction Lactobacillus brevis subsp. gravesensis ATCC 27305 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus brevis; 1074.5972 1140.9684 860.0397 627.7165 946.3652 840.6331 935.5806 1016.6984 702.83275 732.9322 936.1667 867.2115 77381141 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas fluorescens PfO-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 2831.8775 2480.2747 3081.2369 3066.6841 3012.9925 2500.2875 2159.2015 1868.7665 2234.6737 2175.2802 3511.436 3151.6839 89512742 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 1718.529788 1360.603333 1113.00343 1290.23425 1336.70983 1115.66679 1003.181945 1292.72177 1278.517355 1028.60979 1900.065833 1300.2433 268618507 pstA Stress Phosphate limitation Sulfurospirillum deleyianum DSM 6946 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Campylobacteraceae;genus:Sulfurospirillum;species:Sulfurospirillum deleyianum; 612.3919 759.3289 709.6962 952.6029 785.5192 707.8048 594.4771 618.1392 804.6655 695.8245243 712.1047 317969807 sir Sulphur sulfite reductase Synechococcus sp. CB0205 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 765.4663 779.1181 861.1156 597.7316933 2985.862563 597.1747 880.1909 627.92125 708.4534 585.85895 1041.1302 956.58855 170726605 exaA Organic Remediation Chlorinated solvents Shewanella woodyi ATCC 51908 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella woodyi; 517.9658012 604.2152478 697.3115425 596.6318686 724.2875 586.6408037 531.6675403 739.2301 711.2945 126035179 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 567.3969401 785.8461 932.6498 776.814 1147.9809 974.3573 885.4098 627.897 747.3725 1072.3812 1378.0032 1028.5254 256648721 phzF soil_benifit Acetobacter pasteurianus IFO 3283-32 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Acetobacter;species:Acetobacter pasteurianus; 1113.027 1029.5119 1034.1083 1027.057 988.2517 1196.1842 1201.6517 643.0795 1068.3166 1444.3832 898.535 91794508 ChrA Metal Resistance Chromium Shewanella denitrificans OS217 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella denitrificans; 1432.7694 1530.0751 1575.8331 1626.855 2120.8137 1383.6211 1286.2599 1308.6182 1249.079 2212.5699 1650.3536 71906166 sigma_70 Stress Sigma factors Dechloromonas aromatica RCB superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Dechloromonas;species:Dechloromonas aromatica; 756.6413 789.10185 970.6415 534.0665 713.7886 936.8095 780.9677 949.05365 892.8036 800.6065 929.4191 66866174 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria; 1049.9624 1360.933777 1597.9912 1550.2585 837.0999545 1399.3253 1728.2766 810.4416 1986.2135 1487.2148 1146.333846 1073.032 148262009 CadA Metal Resistance Cadmium Acidiphilium cryptum JF-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Acidiphilium;species:Acidiphilium cryptum; 3914.6684 4640.4691 5302.5795 3816.9523 1423.2292 4295.057 5486.5655 2960.9229 4536.3055 4819.5066 4060.0138 3665.2325 159177622 pstB Stress Phosphate limitation alpha proteobacterium BAL199 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 8951.2023 12086.4284 9351.4627 10171.4532 14215.6892 11548.4678 9148.3668 10720.3992 11216.7375 10474.5912 8258.1451 10160.2214 237797281 vdh Carbon cycling Carbon degradation Others Pseudomonas syringae pv. oryzae str. 1_6 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas coronafaciens; 2210.1502 1176.1761 1581.4308 1686.7543 811.9406947 1134.394 1250.9766 1281.7208 1438.4732 1339.8652 157741868 rubisco Carbon cycling Carbon fixation Mycobacterium sp. DSM 3803 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 3184.744 4954.7642 2864.7294 2669.1271 5764.8743 3702.3094 5534.8781 3203.1052 2258.9617 2452.5431 4198.6358 3157.5613 238867918 SMR_antibiotics Antibiotic resistance transporter Edwardsiella ictaluri 93-146 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Edwardsiella;species:Edwardsiella ictaluri; 3512.9621 1862.7577 2729.5558 3262.4217 1890.9293 2952.4311 3709.2652 8187.9715 2558.1064 2618.9232 1717.567 4885.64 16331536 sigma_24 Stress Sigma factors Synechocystis sp. PCC 6803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechocystis; 3883.2906 3018.9917 2545.6458 3897.7814 3624.4375 3102.9661 6238.0489 2551.3991 3077.1015 2490.9222 2239.1651 2973.5341 206588108 avrBs3 soil_borne_pathogen secretion system type III Ralstonia solanacearum MolK2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 377.436297 706.2179 573.4373 513.7257 763.1389352 714.0431 709.5598 711.4005 557.619 801.873 23325733 amyA Carbon cycling Carbon degradation Starch Bifidobacterium longum NCC2705 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium longum; 1812.1378 4217.1232 3099.4985 3081.7924 3220.4098 4577.3719 2874.1294 3700.724 4190.4136 3244.4789 2644.0037 4934.3212 78355738 TerC Metal Resistance Tellurium Desulfovibrio desulfuricans G20 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio alaskensis; 1043.9581 698.0372 977.521882 700.065748 594.4931351 826.8428 1339.9188 690.8012 1151.7321 70981834 rgh_fungi Fungi function carbon degradation Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 2233.3478 1912.2567 1038.987406 4060.6145 15131665 AceA Carbon cycling Carbon degradation Others Haloferax volcanii superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloferax; 1035.2809 862.5308 997.3506 1502.1802 980.3786 1261.6526 1125.2924 799.1362 1187.6207 1105.534091 1561.2629 1271.3546 170657317 iro virulence Iron oxidation Methylobacterium radiotolerans JCM 2831 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium radiotolerans; 4771.1923 4876.1427 5843.8845 4871.5521 6121.7307 5403.9611 5356.5504 3734.4586 4603.019 4042.6009 7638.3104 5410.2432 167348311 nahA Organic Remediation Aromatics Polycyclic aromatics Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 4107.7174 8300.0927 5493.7592 5422.8227 6297.3718 6305.9897 10350.722 4109.6063 6914.5873 5572.3375 6727.2013 4133.6841 253574458 amyA Carbon cycling Carbon degradation Starch Paenibacillus sp. oral taxon 786 str. D14 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus;species:Paenibacillus sp. oral taxon 786; 8663.7377 5864.3278 7542.7507 10121.3385 5029.9458 4851.1617 4967.1936 4226.703 5367.3173 7593.9897 7922.8097 4508.7283 55791946 catechol_B Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 691.8439 1425.2293 897.915 1055.6135 1289.5518 1120.54 875.2816 594.3803 1304.1567 1433.8168 776.2588891 1014.0103 283951832 obgE Stress Radiation stress Acidaminococcus fermentans DSM 20731 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Veillonellaceae;genus:Acidaminococcus;species:Acidaminococcus fermentans; 394.4819805 518.0358 437.0743 436.4098286 530.8396399 428.8041109 517.9809962 542.06 388.2573643 254428948 AceA Carbon cycling Carbon degradation Others Alcanivorax sp. DG881 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax; 709.1044 544.8730201 721.2603 667.9324 1224.786 817.0919 658.3337 1010.8157 797.4046 996.6168 586.1378 268549524 amoA Nitrogen Nitrification Archaea superkingdom:Archaea; 7027.0929 9070.6351 3687.5334 5216.0449 6449.8255 4527.373 4016.9081 5666.1431 4290.0703 3955.0001 8318.0625 3376.0155 118424358 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2162.5999 2881.2192 2785.3874 1952.0343 4904.2252 1711.6873 3152.5806 1186.4245 2692.5118 1439.2325 2827.6238 2088.6078 126707317 sigma_24 Stress Sigma factors Sagittula stellata E-37 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 2263.4496 2154.6259 1861.3595 2746.8879 1972.7397 2297.4055 1762.0105 1772.5134 1465.2382 2022.5455 1389.8473 1836.0974 27349245 pcpE Organic Remediation Herbicides related compound Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 6319.0899 6047.3874 7490.8157 5752.1249 7165.0739 5508.2513 7847.8265 10952.0305 4530.2247 4542.7238 6935.903 7241.2184 169615238 phospholipase_D_fungi Fungi function carbon degradation Phaeosphaeria nodorum SN15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Phaeosphaeriaceae;genus:Phaeosphaeria;species:Phaeosphaeria nodorum; 4377.9887 1310.4571 3802.2209 3514.7301 2466.901 1893.2118 2361.1234 1561.8506 2312.7332 3090.2926 4315.1311 2506.5244 77979436 B_lactamase_A Antibiotic resistance Beta-lactamases Yersinia intermedia ATCC 29909 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia intermedia; 651.5776324 1302.2891 1387.0312 733.7849 770.3159 783.6705 597.3381 740.5444 111019873 nmoA Organic Remediation Aromatics Nitoaromatics Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1963.8153 3145.2577 2073.8541 1820.538 3093.1914 2361.2239 1995.9802 1446.432246 2078.4032 2223.5081 2283.2022 2339.6763 88947369 tutFDG Organic Remediation Aromatics BTEX and related aromatics Desulfotomaculum reducens MI-1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfotomaculum;species:Desulfotomaculum reducens; 904.4906 719.0879 538.6169996 391.6390434 713.6542 780.721 696.9035 604.3235 636.5546 638.2109 113461741 sigma_24 Stress Sigma factors Haemophilus somnus 129PT superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Histophilus;species:Histophilus somni; 811.9555 1085.3981 1141.2333 956.0187 1164.5265 889.6905324 443.5998305 1005.0819 832.8496 1082.092062 825.1906 4585361 HcaB Organic Remediation Aromatics Aromatic carboxylic acid Rhodococcus sp. I24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 415.1947023 780.0737 633.7346244 406.0306002 520.0591536 763.683 551.2821 677.4035 668.9402 592.8156 923.7614 192764360 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 378.2288071 808.668 429.4541859 390.6391256 658.5014409 483.3537734 463.3513 564.6822 795.1629 227848832 B_lactamase_C Antibiotic resistance Beta-lactamases Halogeometricum borinquense DSM 11551 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halogeometricum;species:Halogeometricum borinquense; 1482.0391 2032.7052 2894.0846 1130.8814 1309.6299 2171.7876 2071.2937 2550.927 2693.2574 1862.8764 1083.3895 2240.5013 113728353 Arylest Organic Remediation Aromatics Other aromatics Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 2812.6425 3383.4033 2831.1141 2938.4752 3623.0914 3238.4252 2562.6783 1782.3299 3155.394 3451.7059 2360.3452 2258.9988 46128645 AceB Carbon cycling Carbon degradation Others Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 2968.2288 4146.5804 3471.0695 2639.513 4776.5896 4054.6048 3073.0919 3182.2617 3489.3806 3908.7822 3290.5779 4532.8285 146405358 dehH109 Organic Remediation Chlorinated solvents Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 978.422 2431.5599 1150.2914 955.9503 2018.0909 1410.1536 1617.325 1079.3743 1572.9209 2148.0341 924.1062848 1589.2584 90196221 ZntA Metal Resistance Zinc Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 2414.5495 2417.747 1977.2683 2351.5911 2582.0423 2340.7787 1646.4021 1504.0164 2452.4389 1862.9211 1613.4443 1414.5555 255034957 B_lactamase_C Antibiotic resistance Beta-lactamases Dyadobacter fermentans DSM 18053 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Dyadobacter;species:Dyadobacter fermentans; 1570.9475 2186.648 3191.4171 1623.3759 2133.2132 1860.0238 1726.6592 3974.3774 1948.9835 1698.0932 3422.4249 2443.5341 169002637 ChrA Metal Resistance Chromium Paenibacillus sp. JDR-2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 2774.4947 1139.2991 2123.4337 2370.1923 1226.4165 1416.9438 1482.9017 1189.9952 1551.0675 2423.5774 2371.5647 2062.2829 108461298 sigma_32 Stress Sigma factors Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 3197.9613 5034.3542 3326.2417 2859.824 6554.6527 3712.9583 3392.5378 3879.1288 4992.4196 4613.8988 1769.1718 2939.6701 71848798 pstB Stress Phosphate limitation Dechloromonas aromatica RCB superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Dechloromonas;species:Dechloromonas aromatica; 1522.58 3699.21475 3009.6081 3041.645 3092.9828 3736.92825 2568.6428 2292.6945 3363.86335 3630.2351 3644.1359 3583.9027 145322737 mauAB Organic Remediation Herbicides related compound Novosphingobium aromaticivorans DSM 12444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium;species:Novosphingobium aromaticivorans; 2177.7246 3719.845 2926.7548 2486.95 5369.2836 1831.0385 3177.1039 1719.0488 2268.9449 2069.9918 3476.7445 2780.4161 161390794 glnA Stress Nitrogen limitation Roseobacter litoralis Och 149 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter litoralis; 1011.5057 771.1332112 537.932142 1205.025947 219949339 fnr Stress Oxygen stress Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 3274.9821 2055.0429 2677.3009 3747.5195 3383.8031 3525.7654 2371.8825 1988.7441 3435.4228 3810.7854 3769.1239 3154.1282 156045730 katE Stress Oxygen stress Sclerotinia sclerotiorum 1980 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Sclerotinia;species:Sclerotinia sclerotiorum; 715.7131 1170.597755 30583.67501 639.4816864 972.2053693 7563.632512 704.8933 775.3833 87285947 sigma_24 Stress Sigma factors Blastopirellula marina DSM 3645 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Blastopirellula;species:Blastopirellula marina; 1098.217524 1162.7327 969.5108 981.6472016 886.5125183 742.3417 912.7291 790.7854479 1034.523352 816.4568 146396283 cytochrome Energy process Energy process Geobacter uraniireducens Rf4 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter uraniireducens; 1096.1158 1544.8947 1317.0593 919.3916 2064.8451 1353.8731 1024.3372 1387.4038 1158.708 1267.4255 1845.2097 1617.7805 262220393 pstC Stress Phosphate limitation Grimontia hollisae CIP 101886 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;species:Grimontia hollisae; 839.626 807.8611 1074.6861 874.6555 802.8535 1489.1911 902.6882 643.429 915.6712 808.4371 253701664 sod_CuZn soil_benifit Geobacter sp. M21 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 1171.2023 2359.7683 1623.6244 1760.5155 1716.767 2200.1896 1629.2082 1367.7828 2000.8213 2347.88 1927.1816 2288.8667 25990800 dsrA Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 1394.8366 1867.5362 1491.8821 1553.5185 1946.4263 1639.107 1511.9205 1807.3791 1465.9427 1439.7464 1635.5914 241761966 pstB Stress Phosphate limitation Zymomonas mobilis subsp. mobilis ATCC 10988 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Zymomonas;species:Zymomonas mobilis; 2050.5745 3178.3501 2376.8279 1679.207 3951.8687 1985.6416 2678.2408 2150.3603 2579.3657 2242.3124 2174.2026 2051.1597 76058152 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 17322.7473 10679.663 12036.7458 22102.2714 11172.4941 16619.5617 29919.9397 16560.17 16613.8761 15199.9498 15360.4666 15202.4514 198248723 glucoamylase Carbon cycling Carbon degradation Starch Acidithiobacillus ferrooxidans ATCC 53993 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus;species:Acidithiobacillus ferrooxidans; 1094.3561 1404.5442 643.67511 663.4265 1171.143255 677.5355 811.7301328 46205208 mer Metal Resistance Mercury Magnetospirillum magnetotacticum MS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magnetotacticum; 2184.15195 1802.65745 2153.02885 2164.6678 1985.48995 2082.43875 1840.5242 2431.4518 2117.25825 2104.87575 10875.42451 1805.0554 333795550 CysJ Sulphur sulfite reductase Agrobacterium sp. ATCC 31749 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium; 2123.1761 1277.9381 1110.8458 2740.3679 2038.572 3748.1148 1780.9016 1580.4345 1547.5582 1077.8638 1477.7792 77955729 gyrB other category gyrB Marinobacter aquaeolei VT8 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter hydrocarbonoclasticus; 1342.6387 2172.8988 2024.1145 1824.6062 1605.149401 2320.6625 1547.1502 1044.180839 1738.0679 1850.437 2170.7911 1967.9142 108860571 gyrB other category gyrB Rhodococcus maanshanensis superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 1470.541 746.3824 1037.4505 1233.5443 1326.4849 1065.8 978.4448 1523.7221 1241.4388 1099.337 1103.8585 1339.7966 62003569 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 5529.154969 7211.482345 12504.9172 7645.796236 19653.758 10888.4617 6924.210273 6699.800278 20951.2294 4421.957701 9058.075509 21497.2364 227950903 glnA Stress Nitrogen limitation Meiothermus silvanus DSM 9946 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Meiothermus;species:Meiothermus silvanus; 1568.7177 1391.5507 1446.548 1352.8223 1677.8051 1358.7638 1047.1056 2514.9894 1561.703 1461.2081 2696.7137 1358.61908 218288652 TehB Metal Resistance Tellurium Alicyclobacillus acidocaldarius LAA1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Alicyclobacillaceae;genus:Alicyclobacillus;species:Alicyclobacillus acidocaldarius; 1640.4327 896.4642 1356.6212 1666.9888 723.3256558 1085.22115 1447.1505 900.4744 931.7844 497.0269565 149809649 sox Sulphur Sulphur oxidation Roseobacter sp. AzwK-3b superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 5197.4394 10809.0254 8604.7002 8165.1905 7986.4389 13077.2397 9073.5695 8377.0281 14096.3313 13459.4911 5255.406 10609.0083 84687073 fnr Stress Oxygen stress Rhodobacterales bacterium HTCC2654 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Maritimibacter;species:Maritimibacter alkaliphilus; 1049.6534 923.7401495 769.4573 1422.6757 844.1402 932.0937642 21225707 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 1138.9379 1591.1119 1201.4559 1414.3105 829.1559229 1426.9046 1302.9032 1116.607 1745.3019 1809.2663 1503.8844 84693802 pcc Carbon cycling Carbon fixation Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 1464.7517 953.4354619 615.4018725 798.8864008 872.1326 886.6161 1417.019027 898.6586 170095617 ppx_fungi Fungi function phosphorous Laccaria bicolor S238N-H82 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Tricholomataceae;genus:Laccaria;species:Laccaria bicolor; 1173.338 479.5278 1119.8685 938.6487 541.693 368.153483 524.7247947 684.9612 1083.605612 151302244 APS_AprB Sulphur adenylylsulfate reductase Desulfobotulus sapovorans superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfobotulus; 600.3162 1815.2152 784.1315537 1059.3392 659.4873351 1881.6954 1046.1536 1230.8956 2049.5605 1864.5737 1871.7054 149361012 atzA Organic Remediation Herbicides related compound Marinobacter algicola DG893 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter algicola; 712.1576423 1848.9065 1114.4806 690.3268225 813.0418 1466.7183 1586.8486 1030.3641 1709.9823 2078.5118 1965.4149 32474487 sigma_70 Stress Sigma factors Rhodopirellula baltica SH 1 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Rhodopirellula;species:Rhodopirellula baltica; 1307.9431 1815.2917 1921.0441 1424.7344 1679.1892 2029.658 1650.3708 1605.4381 1956.369 1874.5677 1500.4566 2099.4289 158138725 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 2130.3892 1092.6569 2014.3032 806.7472 813.2482 1195.0486 1091.9264 758.2526 1357.7956 781.6163752 1055.5095 142851284 AceB Carbon cycling Carbon degradation Others Aeromonas salmonicida subsp. salmonicida A449 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas;species:Aeromonas salmonicida; 791.0951 1795.5025 1279.2421 1236.1879 1606.8396 1803.2946 1615.1916 1041.8268 1571.0571 1892.2442 790.7937728 2003.9067 119877272 atzC Organic Remediation Herbicides related compound Stenotrophomonas maltophilia R551-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 583.096 442.2017916 628.020588 558.5659032 573.5395292 577.8242 862.9862 641.239 577.1714 612.6962 219675417 glnA Stress Nitrogen limitation gamma proteobacterium NOR5-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 470.2271415 309.0156973 404.2567 424.680748 145566972 phenol_oxidase Carbon cycling Carbon degradation Lignin Coprinopsis cinerea superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis; 693.4423 301.7062324 389.9405528 433.1867132 421.1659837 630.4496 520.3627 388.339449 519.7312 396.8772744 3169046 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 6198.7634 4994.7504 4893.8745 7166.6546 3725.9848 4895.8661 5511.3297 3749.9036 4702.1747 6068.4517 2973.7654 3671.5082 160917599 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1630.8286 1449.9626 1381.7164 2311.7039 2626.3507 1835.1066 1969.1399 1744.1773 1619.5982 1361.8379 1843.0715 2176.5086 115396494 endoglucanase Carbon cycling Carbon degradation Cellulose Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 714.0609 499.6878066 735.4217 893.7224 841.5155 1314.2931 936.786 584.3689 838.913 602.1526043 764.6996 90425176 ureC Nitrogen Ammonification Rhodopseudomonas palustris BisB18 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 865.9180356 944.0577 787.2139347 909.4609 1126.0068 1034.7358 703.9738 695.2732555 1025.3743 1030.3506 1332.7168 643.7428764 62512311 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2293.4304 2176.7215 2200.682 1512.0424 1465.8186 1988.7675 2123.3915 3174.2002 1469.1406 1748.13 2308.1398 1835.4382 33635761 cap virulence capsule Prochlorococcus marinus str. MIT 9313 superkingdom:Bacteria;phylum:Cyanobacteria;order:Prochlorales;family:Prochlorococcaceae;genus:Prochlorococcus;species:Prochlorococcus marinus; 809.4974 1665.2099 622.5973422 438.6762732 1353.3317 925.0314 1448.8159 499.3443079 985.4651 842.7878 1014.535 747.4243 251789465 narI Stress Oxygen limitation Dickeya zeae Ech1591 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Dickeya;species:Dickeya zeae; 5042.068 9121.4396 5789.565 7683.1061 4998.1507 8611.3669 8144.2516 8889.9466 7617.6705 7751.8833 5181.3142 8244.339 145094 hydrogenase Energy process Energy process NiFe] hydrogenase large subuni superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio; 1693.3157 2437.8929 1874.4014 1892.0802 1778.5751 2694.136 2221.4505 1556.5368 2351.2563 2573.7773 1017.465885 2459.5323 145962927 pilin virulence pilin Vibrionales bacterium SWAT-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales; 1410.8613 2370.9308 1658.5918 1510.2343 3212.4468 1818.5201 1817.9967 2215.2634 1941.8544 2399.8598 1989.474 124265706 obgE Stress Radiation stress Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 1278.3114 1172.0602 2105.3466 864.4097 1445.5701 1106.292 1764.6335 1507.3957 1540.5457 1689.7243 116626963 sigma_24 Stress Sigma factors Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 2445.3632 2123.8399 2182.3913 2494.47 3788.3048 2347.4642 2450.8321 1870.3643 2451.8215 2573.2413 3651.1391 1946.9449 220906009 sigma_70 Stress Sigma factors Cyanothece sp. PCC 7425 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 1624.9184 1590.6914 1343.71745 1293.28605 1116.47015 1441.7862 1385.51175 1700.20845 1098.5238 1326.7138 1918.9652 1509.02715 88787176 SMR_antibiotics Antibiotic resistance transporter Synechococcus sp. WH 7805 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 1700.005 614.8283 619.3404868 1818.9491 860.0425 410.8611768 944.8944 952.8725 439.023822 920.1936 764.4112 158329941 narI Stress Oxygen limitation Azorhizobium caulinodans ORS 571 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Azorhizobium;species:Azorhizobium caulinodans; 5325.3686 4848.109 7003.3067 5746.3856 11637.9507 4463.1358 7409.6638 3757.6625 4591.836 4839.8184 6068.0382 4388.0484 196232901 CysJ Sulphur sulfite reductase Chthoniobacter flavus Ellin428 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Spartobacteria;genus:Chthoniobacter;species:Chthoniobacter flavus; 862.058 1432.8239 888.4934 2220.1806 1076.8677 1420.278 569.3729 865.5509 662.3268 783.0597 257446587 grpE Stress Heat shock Enhydrobacter aerosaccus SK60 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Enhydrobacter;species:Enhydrobacter aerosaccus; 602.4688705 1324.1681 975.1342 680.2865518 796.1095101 779.7909 736.30645 1994.8325 679.70375 1439.9472 1299.2312 94971322 sigma_70 Stress Sigma factors Candidatus Koribacter versatilis Ellin345 superkingdom:Bacteria;phylum:Acidobacteria;genus:Candidatus Koribacter;species:Candidatus Koribacter versatilis; 1094.7591 776.7575 961.0579952 742.0180494 718.3655 851.7010392 748.3103 852.1197 736.5167 674.8076 126459918 pimF Organic Remediation Aromatics Aromatic carboxylic acid Pyrobaculum calidifontis JCM 11548 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Thermoproteales;family:Thermoproteaceae;genus:Pyrobaculum;species:Pyrobaculum calidifontis; 640.5496528 550.2777051 555.8310276 418.9674254 536.0381 377.8006415 514.9412 575.6416 859.7549 207089113 CopA Metal Resistance Copper Nitrosococcus oceani AFC27 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Chromatiaceae;genus:Nitrosococcus;species:Nitrosococcus oceani; 1212.2917 1902.1704 1210.7466 954.1133605 1557.8861 1273.139 2335.7398 715.3664589 1361.784 1090.7276 1690.94753 1217.8945 10187455 nitA Organic Remediation Aromatics Other aromatics Alcaligenes faecalis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Alcaligenes; 4154.4752 1843.8987 2106.1608 3309.6097 2638.9778 1507.9229 1776.245 1912.3056 1786.0382 1913.9593 4025.4424 1476.7493 255942851 per_fun soil_benifit Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 1464.59725 1915.9069 1451.83305 1599.32985 2499.6062 1883.10135 1555.15065 1267.1237 1960.8305 1804.36985 1598.6932 1714.8133 113461681 sigma_32 Stress Sigma factors Haemophilus somnus 129PT superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Histophilus;species:Histophilus somni; 459.6558626 468.9654294 516.531449 451.3259184 673.1962 565.2687625 373.4793924 576.206035 134093784 czcC Metal Resistance "Cadmium,Cobalt,Zinc" Herminiimonas arsenicoxydans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Herminiimonas; 978.2608 534.5168513 734.1177437 474.5143134 403.4247772 146190854 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2184.0512 822.9142 1302.0691 1935.9808 1066.7962 1169.9706 1091.2086 960.002 1253.6818 1508.7995 1876.4417 1812.7616 70981957 cutinase_fungi Fungi function carbon degradation Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 2567.7985 2396.709 3670.1587 2034.3701 2124.1885 1474.3609 1988.3066 4979.0441 2322.6931 2219.142 4653.6378 2850.9866 18146817 pectinase Carbon cycling Carbon degradation Pectin Aspergillus oryzae superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus; 528.9937808 376.1229405 351.2896566 591.6235 637.3203 374.8576278 647.9334 114571236 pimF Organic Remediation Aromatics Aromatic carboxylic acid Maricaulis maris MCS10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Maricaulis;species:Maricaulis maris; 4514.31305 5872.185481 4794.21472 3918.2318 4338.8992 5142.569771 4420.883898 5054.511893 5892.527229 5176.508029 3963.00245 5100.70584 261856381 pstB Stress Phosphate limitation Halothiobacillus neapolitanus c2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Halothiobacillaceae;genus:Halothiobacillus;species:Halothiobacillus neapolitanus; 471.3957581 590.5028 609.4681439 468.6806564 460.7250755 648.3776 739.2563 524.3186 514.0587 574.9165763 119373932 TehB Metal Resistance Tellurium Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 2349.4834 1345.2368 1495.5916 1328.1723 678.492 1217.5761 840.8475 1178.9888 1203.6428 2141.1207 1090.0052 39933735 bco Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 2734.6277 2197.7595 1833.4727 3085.9565 1798.4826 2152.0154 1737.1889 1254.0995 2080.8146 1848.6616 1850.9275 1997.631 33284995 ChnA Organic Remediation Other Hydrocarbons Acinetobacter sp. NCIMB9871 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter; 632.6075 897.8468 954.3573 709.3948 1694.3947 759.5551 847.5007 1199.37805 1018.2102 974.9427 1227.2737 219956344 TehB Metal Resistance Tellurium Anaeromyxobacter dehalogenans 2CP-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter;species:Anaeromyxobacter dehalogenans; 4925.9189 3123.315 3579.9994 4691.1557 4470.8481 3407.6855 2610.7385 2570.3786 2999.3681 3038.4133 7697.2667 3907.1827 87331854 nahA Organic Remediation Aromatics Polycyclic aromatics uncultured bacterium superkingdom:Bacteria; 2797.00725 3122.05985 3117.3529 2725.2664 2643.98305 2614.05255 2815.03475 3378.3065 2464.72275 2794.7837 3923.6502 3232.92445 119536708 pimF Organic Remediation Aromatics Aromatic carboxylic acid Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 3008.8212 4083.097 4296.0545 1903.4355 1613.6461 4027.2946 3109.8196 4796.8143 5092.4607 3703.1297 967.9031328 3289.9549 219965663 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 3851.4023 3929.7276 4130.5515 3240.1495 5675.4801 3603.6727 4650.9938 2679.2202 3737.7709 3621.2238 3350.6394 3490.4884 106770387 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Roseiflexus sp. RS-1 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus; 1648.425 2253.8777 1661.2632 2184.1385 1132.0713 2149.8533 1222.1321 1831.8884 1260.8038 1320.923909 209420714 pmoA Carbon cycling Methane Methane oxidation uncultured methane-oxidizing bacterium superkingdom:Bacteria;phylum:Proteobacteria; 429.1106425 1133.2846 599.7538 566.968 774.5525557 624.2953 473.881 741.1204 696.6064 614.4451 126658952 CopA Metal Resistance Copper Cyanothece sp. CCY0110 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 1012.9564 835.2872 1174.8777 873.4775 2049.2477 849.0236 577.9633411 747.463 655.7865921 874.9695 1873.7749 1046.0342 119671787 fnr Stress Oxygen stress Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 1899.3806 1495.4535 2534.6394 1802.8682 1628.3018 1657.3063 1687.3967 2834.288 1693.732 1796.6259 1938.6414 2020.6052 177841041 amyA Carbon cycling Carbon degradation Starch Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 4805.2969 6392.1754 5185.1877 6267.1518 4398.1383 6833.0792 5493.7917 4271.6946 6766.8089 6714.4196 3088.1466 6639.2609 148502359 vanA Carbon cycling Carbon degradation Others Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 1931.3226 2449.4249 2296.3518 1962.9238 4766.56 2759.1509 2491.4826 2464.0547 1504.4834 1767.8276 4400.2983 2230.7926 258509138 srt virulence surface protein Lactobacillus rhamnosus GG superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus rhamnosus; 972.5252 1136.5722 1251.5444 1557.1483 1245.888 1284.0123 988.8369 889.4946 982.7509 1042.4886 1719.9694 1527.6963 209516642 cadBD Metal Resistance Cadmium Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1626.4229 2810.052 1662.7501 2621.1858 1645.6498 2382.3871 2300.9047 1618.2928 2097.3444 2349.1418 769.8443206 2426.2039 76056949 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1485.5584 495.3425845 976.6027 1458.1974 1016.0036 904.8405 1123.4514 2366.2763 933.3943 1254.1151 804.1514511 1275.0898 126461630 pcc Carbon cycling Carbon fixation Rhodobacter sphaeroides ATCC 17029 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 5305.2336 4104.7084 5557.5584 4375.3867 3462.561 3832.6535 3465.4425 4790.9437 3608.6308 3782.3556 5164.9054 4620.7293 114541423 phn Organic Remediation Herbicides related compound Roseovarius sp. HTCC2601 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pelagibaca;species:Pelagibaca bermudensis; 1681.0789 855.6196 1212.9569 675.6218717 742.146 568.4989 882.6314 690.6538 678.0938 1324.3322 781.6315 118473011 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 8361.9006 15473.4378 10015.2048 6179.3233 13579.483 8510.4718 7138.6912 8930.0723 10806.4736 9260.1468 4666.539 4744.4852 119715081 Catechol Organic Remediation Aromatics Other aromatics Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 882.9905839 1042.6723 1085.62331 1034.0399 1394.0567 1137.6201 885.0313 1182.079 794.047411 679.8467963 1767.2498 1480.2648 169600883 protease_serine_fungi Fungi function carbon degradation Phaeosphaeria nodorum SN15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Phaeosphaeriaceae;genus:Phaeosphaeria;species:Phaeosphaeria nodorum; 671.7223 1613.2457 1073.0286 641.9071 1882.7008 895.9116 964.4167 512.231435 1094.0836 914.4987 793.436479 840.0215 76875698 ZntA Metal Resistance Zinc Pseudoalteromonas haloplanktis TAC125 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Pseudoalteromonadaceae;genus:Pseudoalteromonas;species:Pseudoalteromonas haloplanktis; 914.7447177 550.8492934 645.8460554 648.4124592 1218.1038 828.1595462 332991654 sir Sulphur sulfite reductase Alteromonas sp. SN2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Alteromonas; 536.1501 478.1798756 643.4798 572.2326454 342.0350632 599.1694 480.2872798 68230223 TerC Metal Resistance Tellurium Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 1104.006877 787.1860545 681.3370555 1363.8215 842.1431822 1398.7868 1444.7325 774.9804 1133.1155 1263.7182 1385.5253 91975371 pstB Stress Phosphate limitation Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 4023.2417 620.8937 2104.4306 2708.8362 1452.7365 1172.4533 1522.9939 2024.4759 1238.5615 1545.191 3605.7566 1200.7566 15157994 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 1449.8284 2526.734 2075.7587 1373.4371 2185.1054 3230.135653 2560.2925 2825.6698 1256.0349 2702.359 1058.3799 2237.2056 170290137 tutFDG Organic Remediation Aromatics BTEX and related aromatics Candidatus Korarchaeum cryptofilum OPF8 superkingdom:Archaea;phylum:Korarchaeota;genus:Candidatus Korarchaeum;species:Candidatus Korarchaeum cryptofilum; 1381.1088 3006.5677 1483.0275 1696.7672 1293.5712 2923.2364 2493.9257 1679.7825 2515.914 2531.6351 785.7966558 2251.9129 282882247 phzF soil_benifit Peptoniphilus lacrimalis 315-B superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XI. Incertae Sedis;genus:Peptoniphilus;species:Peptoniphilus lacrimalis; 1973.3254 1493.5167 865.9718 1408.5439 1457.2047 757.4556549 880.0303 815.6585 835.459258 676.117203 2048.674 850.0598 229587649 katE Stress Oxygen stress Pseudomonas fluorescens SBW25 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 1862.4283 2566.2487 2247.8917 1676.1113 2995.0189 2080.2402 1735.8354 2583.6691 2212.0282 2683.979 1311.383 2219.0789 221734296 ChrA Metal Resistance Chromium Agrobacterium vitis S4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium vitis; 1842.223327 764.5406 1548.4916 1698.908309 1634.3688 1262.1686 1304.3828 1876.4346 1236.13855 1475.16055 1881.822987 1288.1904 241772375 sigma_70 Stress Sigma factors Asticcacaulis excentricus CB 48 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Asticcacaulis;species:Asticcacaulis excentricus; 384.4345642 951.2445 719.3556 390.570638 1040.4641 773.2425 848.8968 1452.9369 995.154 1050.4285 70930922 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1457.4446 951.8179 933.2605 1220.9837 1007.2013 808.9149 649.37 916.6082 1099.4598 786.1632 259166455 hly virulence hemolysin Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 5493.635 3708.5678 2492.2568 3941.5176 5744.8341 4185.218 4434.7112 4348.6899 7070.1821 5209.6289 2950.9901 3422.4858 71555692 akbF Organic Remediation Aromatics BTEX and related aromatics Pseudomonas syringae pv. phaseolicola 1448A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas savastanoi; 1396.9321 1773.2412 1779.066 1496.5505 1508.4017 1237.6179 1190.0361 1922.2795 1976.4517 1356.5115 2683.0197 1911.1447 77378687 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 505.7557726 653.5163169 23879.1474 731.1042928 1298.7851 753.2884 385.8594664 601.1345 492.552 792.9296 695.3924 85090607 phenol_oxidase Carbon cycling Carbon degradation Lignin Neurospora crassa OR74A superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Sordariaceae;genus:Neurospora;species:Neurospora crassa; 2876.6908 2186.72987 2824.9639 5381.4151 2976.613454 1598.179833 2705.547017 2454.94015 1702.964646 2139.865333 3751.562 2125.64395 172056884 ppx Phosphorus Phosphorus utilization Exiguobacterium sibiricum 255-15 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;genus:Exiguobacterium;species:Exiguobacterium sibiricum; 1590.5586 1933.3515 1394.9909 1306.7028 2476.8548 2042.1914 2142.3747 1305.3005 2441.9898 1727.1036 1245.939842 1370.1313 77458561 pcbC soil_benifit Pseudomonas fluorescens Pf0-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 2503.028 879.61855 1023.856 2119.0756 1171.9932 1076.80035 1734.5278 2003.3903 1059.2611 1300.6848 729.4109168 1319.2942 121719230 alpha_galactosidase_fungi Fungi function carbon degradation Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 1282.7978 1454.0275 1456.2458 1382.9569 1874.8137 869.1248 1362.6516 932.4284 1331.2171 1425.2708 1708.846 1212.7312 49612611 pstC Stress Phosphate limitation Pectobacterium atrosepticum SCRI1043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium atrosepticum; 2254.2887 3624.7218 3049.9915 1857.8364 4407.656 2322.7265 2251.0895 2980.0477 16660.47726 2749.7605 2168.6049 2104.1116 110680474 pimF Organic Remediation Aromatics Aromatic carboxylic acid Roseobacter denitrificans OCh 114 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter denitrificans; 1759.4966 1564.9769 2214.7562 1662.811 1658.9025 1399.2355 1750.2191 3566.536 1824.2584 2210.4099 6817.701326 2182.6881 2213435 coat_Carmovirus soil_borne_pathogen structural Galinsoga mosaic virus superkingdom:Viruses;family:Tombusviridae;genus:Carmovirus; 862.9176 3732.915376 774.6783 657.3442 1447.4089 1182.474 1055.8918 1248.1321 1113.7082 1299.0377 636.387661 877.5932 167348802 ara Carbon cycling Carbon degradation Hemicellulose Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 1040.4657 813.3446 952.3539504 831.4535 1524.8965 1094.3366 854.3943 1144.9431 896.5487 1020.513 778.4451278 900.8833 29136509 ppk Phosphorus Phosphorus utilization Salmonella enterica subsp. enterica serovar Typhi Ty2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 5705.825 7176.6071 3965.2521 3381.8367 5243.3165 4666.631 3420.3531 4518.3797 6642.5963 3783.8296 3330.4107 3515.8245 153796273 clpC Stress Protein stress Ruminococcus gnavus ATCC 29149 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Ruminococcus;species:Ruminococcus gnavus; 1529.4417 3393.0366 2084.2643 1653.4145 1060.746246 1917.9495 2579.1954 3654.6349 2853.1274 2690.154 1297.8091 2860.0912 146303644 tyrosine_protein_kinase_EPS Bioleaching EPS Metallosphaera sedula DSM 5348 2943.9566 3008.5173 3157.0167 2977.5543 4035.0252 3452.6291 2247.4993 2461.4603 2520.2474 2610.4479 5178.4793 3329.353 261282902 cat_bac soil_benifit Paenibacillus sp. Y412MC10 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 710.2999 1134.6991 872.0202 535.1477961 1240.3897 1032.6719 840.5039 1229.8062 800.8993 962.347 1186.8154 1262.7581 30139172 phoB Stress Phosphate limitation Nitrosomonas europaea ATCC 19718 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas;species:Nitrosomonas europaea; 3390.2447 3700.6292 3677.9955 3501.0463 4818.6987 4045.1374 2771.4479 3134.2319 3268.2838 3355.4958 5991.3277 3443.661 119693948 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium sp. KMS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 5974.1015 4653.34545 6529.8502 4244 4997.582663 4300.06735 3873.15175 9850.24515 5116.698701 4813.82845 15040.99798 6015.43465 251847207 mannanase Carbon cycling Carbon degradation Hemicellulose Paenibacillus sp. oral taxon 786 str. D14 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus;species:Paenibacillus sp. oral taxon 786; 874.1873 881.084 686.8162 505.6441 844.9886 601.6615 616.1462 948.4666 723.9464 644.025 698.5738 193224505 oxyR Stress Oxygen stress Cupriavidus taiwanensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus; 7639.22428 663.1735 595.7195417 632.411 916.1966 558.0073 612.6584 91779393 alkK Organic Remediation Others Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 2298.5884 710.1681 1656.3818 2246.079 1434.4974 1096.5801 994.159 1232.7838 1148.1075 1372.2673 2517.7064 1308.94 5139555 pcaG Organic Remediation Aromatics Other aromatics Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 3215.4636 4583.6755 4040.145 3896.9458 3179.9123 5233.1603 3800.3158 4016.1492 5356.9847 4404.6395 3256.6311 5141.9955 268607912 obgE Stress Radiation stress Ruminococcus flavefaciens FD-1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Ruminococcus;species:Ruminococcus flavefaciens; 1161.0945 3925.3441 2884.5612 2163.965975 1988.3055 4191.4099 3113.5015 1512.77613 4067.7736 2529.110927 1457.2123 4165.296 194440496 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae; 2356.9383 1837.795 2109.185 2398.5599 2330.4303 1980.377 1225.1006 1639.9837 1739.7803 1764.9802 3448.5877 2072.0466 239909818 pstA Stress Phosphate limitation Thermococcus gammatolerans EJ3 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Thermococcus;species:Thermococcus gammatolerans; 849.4096471 884.7178154 1354.2171 684.9349636 805.0090279 1120.8994 760.2585047 1141.250463 168334769 pstB Stress Phosphate limitation Epulopiscium sp. 'N.t. morphotype B' superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;genus:Epulopiscium; 622.1472994 594.3484097 331.907511 569.7836 476.5357381 899.4383488 221157983 sigma_70 Stress Sigma factors Thermomicrobium roseum DSM 5159 superkingdom:Bacteria;phylum:Chloroflexi;class:Thermomicrobia;order:Thermomicrobiales;family:Thermomicrobiaceae;genus:Thermomicrobium;species:Thermomicrobium roseum; 1391.8412 773.3839 1148.663 1668.8105 871.2855 1013.6923 11922.88546 1505.7836 766.7446 1212.3414 633.6248318 860.0433 148263562 phoB Stress Phosphate limitation Geobacter uraniireducens Rf4 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter uraniireducens; 10087.37316 1582.893 1653.125 1332.8651 1151.088275 1803.2647 1271.0274 1898.396175 1350.1117 1690.031 2529.7427 2376.2044 255728049 phoA Stress Phosphate limitation Candida tropicalis MYA-3404 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;genus:Candida;species:Candida tropicalis; 719.2861 1385.6764 905.3447 633.264 598.589413 1263.7914 1243.6824 1026.9023 1772.9332 1493.1106 1068.9123 153815534 ChrA Metal Resistance Chromium Ruminococcus torques ATCC 27756 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Ruminococcus;species:Ruminococcus torques; 496.6351901 1028.5663 1130.6049 486.0833356 879.6845 778.6692 707.3345 622.0749 877.1533 774.9069 673.553719 838.0578 152053 nhh Organic Remediation Aromatics Nitoaromatics superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 448.6413153 777.6017 582.4682311 668.4118 1035.7678 1143.3064 413.7747382 858.3752 748.7439 407.3550212 70992405 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 2130.228 1309.1446 1757.0678 1663.5644 2325.5008 1613.1104 1421.3906 2338.836 1723.6582 2304.3309 1724.486 1640.8783 163667700 sigma_70 Stress Sigma factors Chloroflexus aurantiacus J-10-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aurantiacus; 1334.7002 1498.6902 1572.0673 1125.8818 2839.0957 1725.1031 1373.4909 1665.1848 1717.6357 1916.9332 31276.63535 1558.1409 218219314 nplT Carbon cycling Carbon degradation Starch Mitsuokella multacida DSM 20544 superkingdom:Bacteria;phylum:Firmicutes;class:Negativicutes;order:Selenomonadales;family:Veillonellaceae;genus:Mitsuokella;species:Mitsuokella multacida; 11349.15672 3225.3319 1720.9226 3091.6683 2935.4859 4241.9323 1608.493 2827.3281 1395.6008 2228.5888 3660.6048 3649.3579 159045869 pimF Organic Remediation Aromatics Aromatic carboxylic acid Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 4408.162854 4238.668655 4000.261712 4858.61436 5308.480585 4839.639855 3606.547223 4520.19609 4742.716524 4369.804811 8453.273 4644.80713 54022641 pimF Organic Remediation Aromatics Aromatic carboxylic acid Nocardia farcinica IFM 10152 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Nocardia;species:Nocardia farcinica; 2568.1746 1996.236 2735.9677 2604.3652 927.8038 1005.93 1532.4568 1833.1437 1786.3877 2187.1836 1242.2642 2044.3073 158435721 sigma_70 Stress Sigma factors Clostridium bolteae ATCC BAA-613 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium bolteae; 1204.61515 1077.8121 1063.29775 13856.66616 1132.3256 890.3535 571.506385 936.4347 665.63765 1238.192 1263.637 2632242 ahpC Stress Oxygen stress Bacillus subtilis superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus subtilis; 748.8951872 1358.1474 877.3807 629.3271547 784.0317 686.2788 139002666 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 933.2357 747.5038 1002.6429 1064.7223 688.5332929 643.1455834 531.5992 618.5646 739.1017 672.1198 932.5775 120595484 fnr Stress Oxygen stress Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 1972.9224 1494.5488 1696.0746 1578.0644 1492.4281 2108.4917 2520.5816 1632.9479 1888.0456 946.0407457 1432.0642 70606101 pcc Carbon cycling Carbon fixation Sulfolobus acidocaldarius DSM 639 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Sulfolobales;family:Sulfolobaceae;genus:Sulfolobus;species:Sulfolobus acidocaldarius; 617.4961 363.303898 376.2824923 581.4893 346.6014328 317.9980794 531.1791928 62424736 B_lactamase_A Antibiotic resistance Beta-lactamases Brevibacterium linens BL2 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Brevibacteriaceae;genus:Brevibacterium;species:Brevibacterium linens; 2929.2214 1331.6353 1992.4475 2919.5315 2426.6689 1761.1478 2072.3375 1590.6588 2105.2657 2283.0923 2053.8874 884.4152099 148501863 pcbC soil_benifit Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 2377.342 1726.9221 2034.1758 2457.062 3098.2346 1994.2714 1652.4583 2155.9767 1751.0332 2118.8896 2506.7031 2424.762 46908513 nmoA Organic Remediation Aromatics Nitoaromatics Listeria monocytogenes str. 4b F2365 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Listeriaceae;genus:Listeria;species:Listeria monocytogenes; 1027.329 1477.2444 1468.0373 962.2374 1206.2436 1429.5968 1196.7806 1196.7978 1534.6425 1455.2899 1267.1662 149180533 SMR_antibiotics Antibiotic resistance transporter Bacillus sp. SG-1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 2928.8318 1927.1331 2374.6179 2791.3912 3241.9858 2339.4775 1925.8856 2043.7943 2408.802 2273.6008 3086.3687 3039.7515 133909249 gyrB other category gyrB Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 663.7473639 1144.5491 532.1899 820.2464 487.5564596 673.8644 610.3458 528.2676 375.9407732 1195.5123 252124402 sigma_24 Stress Sigma factors Corynebacterium matruchotii ATCC 14266 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium matruchotii; 1262.89785 853.3817 1598.2384 1777.2265 1839.075 1370.78865 1229.8837 1075.81565 1121.8275 1118.77215 2435.4461 1431.0412 154270967 per_fun soil_benifit Ajellomyces capsulatus NAm1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces capsulatus; 538.4874 607.71795 862.6131 689.9991 1000.2103 607.4795 706.394 389.9533983 772.8137 564.52545 1088.3298 89350026 tfdA Organic Remediation Aromatics Chlorinated aromatics Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 7694.0065 7853.4279 9794.2482 8057.8704 3464.7793 10680.016 11492.9043 6549.7187 9411.1174 10804.6901 6972.8529 5955.4861 85823564 ZntA Metal Resistance Zinc Roseobacter sp. MED193 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 3573.8239 2920.5045 3539.8122 3278.667 3450.1046 3277.4162 2377.0785 2779.6372 2531.3954 2633.6183 4366.4717 2938.187 4098454 nifH Nitrogen Nitrogen fixation Gluconacetobacter diazotrophicus superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter; 1943.0624 2168.0184 3022.1484 2871.4121 1238.1146 3324.4238 2801.4081 1560.7612 2158.513 2094.9488 2202.5997 1979.4082 167646248 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 7936.5131 9419.8958 7210.7561 11005.4681 6798.7378 9280.4514 7146.9727 5236.3446 8178.9395 8645.5119 7968.6727 8582.6812 229351386 iro virulence Iron oxidation Vibrio cholerae B33 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio cholerae; 913.8798 458.6057061 537.9531562 343.2789155 91690340 rubisco Carbon cycling Carbon fixation Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 24846.8352 24557.0107 32517.7728 20418.1744 16211.5784 30153.9104 22475.2229 26566.9254 29593.7267 27267.0517 16474.031 31352.4211 114777111 phoB Stress Phosphate limitation Mariprofundus ferrooxydans PV-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Zetaproteobacteria;order:Mariprofundales;family:Mariprofundaceae;genus:Mariprofundus;species:Mariprofundus ferrooxydans; 2460.5416 2573.461 2094.7182 2082.0238 3197.6015 2688.5573 2481.2511 1905.4062 2069.7248 2097.4166 2292.764 1712.6298 110819316 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 2475.1829 2776.1441 1755.2503 1337.4674 1974.0289 1244.9016 1676.6491 3851.7369 1456.4316 1966.8361 3348.357 1772.5166 115378575 cat_bac soil_benifit Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 716.2504 702.3187 1044.284 843.3155 1244.6556 756.5489 1204.7409 670.1773 600.4543072 519.0612 774.3849702 1063.8176 53850118 sox Sulphur Sulphur oxidation Pseudaminobacter salicylatoxidans superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Pseudaminobacter; 848.5719 1014.1417 975.1488 564.3928 736.0471 583.3102 756.2321 2002.3977 887.3577 797.2398 1551.8693 1222.5086 114314935 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Granulibacter bethesdensis CGDNIH1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Granulibacter;species:Granulibacter bethesdensis; 3679.6838 5258.3429 3433.4559 2389.6017 5176.7874 2993.9946 3193.9308 3321.6424 3488.8797 3022.7802 4423.0977 2284.1565 88817073 ChrA Metal Resistance Chromium Pseudoalteromonas tunicata D2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Pseudoalteromonadaceae;genus:Pseudoalteromonas;species:Pseudoalteromonas tunicata; 1666.169 1930.1021 1603.8507 1790.4035 4445.6319 1694.009 3127.4493 1472.7268 1593.9123 1292.6952 1805.9535 1627.8051 199593969 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1338.112 793.3906 1014.4798 609.8949 1330.6711 526.7998 885.1533 1439.338 812.186 170747007 sigma_70 Stress Sigma factors Methylobacterium radiotolerans JCM 2831 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium radiotolerans; 652.6253576 584.7199 386.3182767 459.9906202 483.0474726 91782273 cymA Organic Remediation Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 1202.4727 1178.1257 1028.4436 1877.179 920.3053 1334.8804 145215318 CopA Metal Resistance Copper Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 2100.4218 3730.5869 2912.1572 2719.4792 2771.8651 4008.8086 3432.9588 3703.629 3982.9927 4008.0966 1968.528 3899.6849 11078877 gyrB other category gyrB Pseudomonas asplenii superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1772.683923 1392.7613 2107.2076 1840.9884 2469.3089 1309.423 1230.0672 1923.8047 1184.7551 1098.890055 3077.4076 3301.9295 56908040 alkH Organic Remediation Other Hydrocarbons Bacillus clausii KSM-K16 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus clausii; 2396.8188 2578.2777 2683.2766 2163.4008 3039.005 2589.5766 1880.5782 2248.4897 2236.887 2201.5102 2977.7055 2425.6271 295676595 CysJ Sulphur sulfite reductase Burkholderia sp. CCGE1002 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1685.9548 1595.4826 1930.3348 1565.4901 2953.4027 1260.2168 2188.7718 1145.0763 8894.138622 1070.937 1095.882183 1179.4989 264677760 sigma_24 Stress Sigma factors Comamonas testosteroni CNB-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 3834.9209 4257.4661 4704.774 4451.6956 2476.8231 5128.3316 4864.5924 2816.0469 4517.2245 4238.7061 3958.1735 2730.3479 260598199 nasA Nitrogen Assimilatory N reduction Cronobacter turicensis superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Cronobacter; 2190.9689 2244.0532 1925.8566 2382.4379 3129.8781 1754.6567 3018.7116 1812.4332 2123.1118 1812.4711 1849.2218 2323.5408 85825425 rubisco Carbon cycling Carbon fixation Roseobacter sp. MED193 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 1066.0946 2702.148 4078.6601 1164.4677 1588.3351 1371.0579 2169.4444 2976.4164 2033.1588 2343.1566 1457.4526 3692.1891 29607464 linB Organic Remediation Pesticides related compound Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 4646.0839 2533.4748 3611.172 4442.7374 2518.6985 3839.9521 3869.1257 4478.8955 3057.9273 4103.1231 3322.2663 3448.0691 83310112 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Magnetospirillum magneticum AMB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magneticum; 1203.2652 3254.7417 2757.5734 1631.5944 2508.5172 2089.0195 1890.477 2790.4948 2173.9129 2146.2921 1754.5408 2439.4007 161785170 ahpF Stress Oxygen stress Gluconacetobacter diazotrophicus PAl 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter;species:Gluconacetobacter diazotrophicus; 1925.25115 1014.45395 1310.0222 2037.9931 1856.385 1215.9911 1163.4424 1439.1859 1432.37655 1500.44145 2788.3075 1654.2193 119376225 pimF Organic Remediation Aromatics Aromatic carboxylic acid Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 5865.0514 5723.9941 7480.9288 6246.222 10991.0893 7068.3117 5892.9442 6007.9557 5533.4195 5447.6083 8609.1446 6951.0951 226913011 phoB Stress Phosphate limitation Clostridium sp. 7_2_43FAA superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium; 1414.0045 1452.1034 1522.982 1291.2383 1808.5501 1677.4374 1055.6395 1069.1462 1196.6603 1231.4249 2661.854 1564.4853 160936566 pstS Stress Phosphate limitation Clostridium bolteae ATCC BAA-613 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium bolteae; 3064.9279 1122.5299 1616.2965 2681.5234 1552.2361 1562.2591 2173.8949 2354.4142 2193.581455 2118.7556 1507.1114 1579.5497 119671769 alkK Organic Remediation Others Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 2475.1963 906.4714 2036.4149 2504.4965 1142.2741 1034.0777 1422.7326 1630.6513 1462.9433 1770.6862 1517.394 1642.8833 260939359 pilin virulence pilin Vibrio orientalis CIP 102891 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio orientalis; 527.1774 1207.6884 717.8839 1013.842 670.4312 607.4139919 91795547 proO Organic Remediation Aromatics Other aromatics Chromohalobacter salexigens DSM 3043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Halomonadaceae;genus:Chromohalobacter;species:Chromohalobacter salexigens; 1694.5246 3085.253 2898.6791 2165.6472 2163.4157 2581.7395 2992.0662 2503.9503 3168.2428 3166.0904 1788.0071 3073.2309 167350417 silC Metal Resistance Silver Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 1400.317 2718.0635 2294.1127 2471.3074 1584.4484 2371.469 1956.6144 2644.0815 2121.5975 2491.7486 1997.886 2125.4929 219965754 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1065.4095 1077.3576 1032.8705 1613.7191 994.238 1351.6596 947.1311 872.0886 1060.1347 1188.7021 1673.9623 1550.8216 212533607 lactase_fungi Fungi function carbon degradation Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 1176.2931 619.7866891 1522.3714 1019.2191 673.5891 772.9909 634.1681 889.7315 847.5606 109899963 nagG Organic Remediation Aromatics Aromatic carboxylic acid Pseudoalteromonas atlantica T6c superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Pseudoalteromonadaceae;genus:Pseudoalteromonas;species:Pseudoalteromonas atlantica; 779.221 539.6485595 691.9632 539.5583925 506.5807185 509.1863 526.2756 731.1568 731.5731309 262219488 iuc virulence aerobactin Grimontia hollisae CIP 101886 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;species:Grimontia hollisae; 716.0758 366.1200097 528.2177 585.6733 636.9762 1648.92574 479.5984 88789788 obgE Stress Radiation stress Nitrococcus mobilis Nb-231 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Nitrococcus;species:Nitrococcus mobilis; 548.0512 1337.1528 922.2977 667.1917377 948.2885 1882.1955 3918.734 1018.2452 614.6124126 262274108 ureC Nitrogen Ammonification Grimontia hollisae CIP 101886 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;species:Grimontia hollisae; 1144.2705 1169.438179 1047.8607 1269.2401 1705.5403 2215.8186 1168.69775 848.25225 965.91465 1161.6857 809.879 196246318 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Cyanothece sp. PCC 8802 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 1235.0326 721.802 935.2088 645.8510259 1399.8773 951.3545 913.638 918.5085 928.8163 793.0859 1175.7401 1235.5681 126007913 ferredoxin_oxidoreductase Bioleaching Electron transport Ferroplasma acidarmanus fer1 771.672 839.2629 777.6153 580.801578 1030.4697 859.5977 694.0712 718.5943 786.443 661.7573 1354.5552 706.9962 218243698 pstB Stress Phosphate limitation Thermus aquaticus Y51MC23 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Thermus;species:Thermus aquaticus; 1246.631832 2317.2846 1731.5073 1483.6063 3050.6841 2124.7501 1469.7261 2215.4208 1824.0603 1891.0159 1448.154911 2031.9893 218130859 CopA Metal Resistance Copper Bacteroides eggerthii DSM 20697 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides eggerthii; 1516.0094 1833.8321 2172.4172 785.0736 1138.8993 1833.1324 1548.3316 2121.7942 1833.7523 1991.8043 2093.0296 188022272 nrfA Nitrogen Dissimilatory N reduction Providencia stuartii ATCC 25827 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia stuartii; 674.5028 2488.5318 1766.722 1734.4628 1209.6184 2557.3458 1696.114 1200.187 2474.2108 2034.1475 796.7519 2271.7012 90196661 phn Organic Remediation Herbicides related compound Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 1260.5271 1118.567 1015.3941 1395.2573 1384.8993 900.1292 786.2841 1090.486 873.3091 802.5216 1590.2606 1358.0606 16411423 adpB Organic Remediation Pesticides related compound Listeria monocytogenes superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Listeriaceae;genus:Listeria; 693.2812 890.5007 1239.1422 755.5618 903.9342 1057.163 1186.3393 877.5936 914.492 46581228 tutFDG Organic Remediation Aromatics BTEX and related aromatics Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 2231.8165 928.4863 1409.4432 1748.5986 1457.3247 1322.8388 1779.8926 2870.5403 1351.9639 1516.8952 1595.1376 1789.737 114330081 CopA Metal Resistance Copper Nitrosomonas eutropha C71 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas;species:Nitrosomonas eutropha; 1625.4423 780.11195 1379.5064 1059.90765 1567.0056 889.4654 955.51585 3920.4826 827.11525 985.2605 2006.8232 1539.8632 304399222 CysI Sulphur Pantoea sp. aB superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pantoea; 1459.0296 507.3194 530.3714 1278.1845 658.2928864 628.867 637.5497 587.0693 479.0858 710.577 1056.7222 772.8703 148501505 vanA Carbon cycling Carbon degradation Others Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 3588.277 5987.4464 5697.6464 6247.5507 4384.5064 6508.8568 8840.0356 4633.6729 6015.4408 5502.8598 5117.673 4979.3496 163839598 katE Stress Oxygen stress Renibacterium salmoninarum ATCC 33209 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Renibacterium;species:Renibacterium salmoninarum; 698.1302 1557.2549 1999.3247 813.4138 647.0119824 1290.1443 2006.1313 1782.6567 1533.8154 1804.3754 1054.56 1997.2465 291197224 exoglucanase_fungi Fungi function carbon degradation uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 5665.2729 18768.93013 2779.9496 1169.820264 1311.0832 5967.1106 1937.6398 1132.3349 6648.3924 2002.3275 170721641 cytochrome Energy process Energy process Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 2316.9638 1982.2192 2146.4788 2373.7948 1232.5215 1154.2665 1355.7809 1991.4554 1517.2041 1905.577 1862.9398 2061.1569 189209792 rgh_fungi Fungi function carbon degradation Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 812.6452376 1749.1833 1595.688609 1299.7612 827.4966 1192.8882 1237.4432 1154.8565 979.387814 86283344 MFS_antibiotic Antibiotic resistance transporter Rhizobium etli CFN 42 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 1554.2511 812.529 1024.6121 1842.3308 1085.6988 1111.0428 1402.3959 1161.7318 1355.7265 821.2812 744.0659235 915.4945 88793715 ppx Phosphorus Phosphorus utilization Alteromonas macleodii 'Deep ecotype' superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Alteromonas;species:Alteromonas macleodii; 382.9032735 531.2881 330.3153165 438.9083 590.4101 558.6713 390.2561583 465.1130855 91797828 Arylest Organic Remediation Aromatics Other aromatics Chromohalobacter salexigens DSM 3043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Halomonadaceae;genus:Chromohalobacter;species:Chromohalobacter salexigens; 831.1234 1171.5633 619.3841054 971.086 1258.8752 1051.7262 721.4773 1012.0019 1257.3046 895.8507 743.8376293 5739395 tfdA Organic Remediation Aromatics Chlorinated aromatics Streptomyces spectabilis superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 1290.8572 1035.7404 809.9511 1552.5049 1007.6201 902.5005 723.4603 1303.1898 1283.1591 72121957 phtA Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 1499.3533 898.108 1256.0371 445.3880503 1134.24 1185.3677 1742.4584 1087.533 1339.4156 1439.4248 119188781 phospholipase_A2_fungi Fungi function carbon degradation Coccidioides immitis RS superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Coccidioides;species:Coccidioides immitis; 458.0036805 424.0754 440.2201549 522.6983 921.4014 33864291 hrcA Stress Heat shock Prochlorococcus marinus str. MIT 9313 superkingdom:Bacteria;phylum:Cyanobacteria;order:Prochlorales;family:Prochlorococcaceae;genus:Prochlorococcus;species:Prochlorococcus marinus; 1064.4693 952.7354 1454.3411 697.0533 1044.0637 1051.3523 1046.2798 1527.2929 884.2824 989.8611 2746.5407 1230.1026 32443237 sigma_70 Stress Sigma factors Rhodopirellula baltica SH 1 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Rhodopirellula;species:Rhodopirellula baltica; 2066.4918 1498.996 1985.0178 1738.9282 2296.1342 2731.1874 1039.6239 1961.6692 2693.6156 1329.6897 1035.5289 269125851 sigma_70 Stress Sigma factors Thermomonospora curvata DSM 43183 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Thermomonosporaceae;genus:Thermomonospora;species:Thermomonospora curvata; 828.3899 544.3951731 574.5132 778.1838 820.3966328 565.7575 497.2435 473.2497 475.5456 975.9994234 832.7159 90107434 fnr Stress Oxygen stress Rhodopseudomonas palustris BisB18 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1576.2801 1190.4495 1932.9536 966.0642 1124.8624 1007.3306 820.6576 1057.77 1358.8899 1657.7937 970.0394 160933181 Al Metal Resistance Aluminum Clostridium leptum DSM 753 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium leptum; 1262.764114 1273.2671 829.4466 863.422 743.9087031 1280.5278 227062034 hrcA Stress Heat shock Thermobaculum terrenum ATCC BAA-798 superkingdom:Bacteria;genus:Thermobaculum;species:Thermobaculum terrenum; 3036.223 3316.7852 3868.9717 2956.597 1347.243288 3455.5307 5295.9991 4455.6432 4007.8282 4072.0022 1704.1612 3964.2544 169812910 pcc Carbon cycling Carbon fixation Shewanella woodyi ATCC 51908 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella woodyi; 1330.2138 1776.5671 1013.579924 715.4206504 1843.5115 1215.0339 1137.9728 1246.268 1035.9399 1171.0702 1276.258889 579.9014021 154252451 tfdA Organic Remediation Aromatics Chlorinated aromatics Parvibaculum lavamentivorans DS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Parvibaculum;species:Parvibaculum lavamentivorans; 3260.8917 3896.7371 3834.5712 3676.4842 3409.2658 4514.4508 3500.4038 3176.2337 3669.38 4105.4345 3918.1245 4786.4513 255714549 ferric_reductase_transporter Fungi function iron Lachancea thermotolerans superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Lachancea;species:Lachancea thermotolerans; 3030.2188 1402.7132 2403.8277 3205.6454 2870.4547 3056.3623 1937.0691 3480.5715 2218.1089 2323.5483 2342.4229 3020.0181 83836235 sox Sulphur Sulphur oxidation Roseovarius nubinhibens ISM superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius;species:Roseovarius nubinhibens; 1653.1263 1592.1568 1513.5023 1619.2803 4313.7304 2124.6005 2839.409 1733.937 1947.6789 1940.8183 1811.7914 1749.1304 56478633 nagG Organic Remediation Aromatics Aromatic carboxylic acid Azoarcus sp. EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 1989.7799 1961.4615 3185.9648 1168.9194 1540.8604 1769.2092 1593.639 2798.5804 1912.4641 1761.6749 1651.0909 2372.8537 154158507 CopA Metal Resistance Copper Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 3323.8757 2358.0226 2340.2901 2012.2623 2744.1842 3057.7084 2415.4464 2263.4384 2969.6051 2499.3529 1963.7951 2764.6925 196225022 CusA Metal Resistance Copper Chthoniobacter flavus Ellin428 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Spartobacteria;genus:Chthoniobacter;species:Chthoniobacter flavus; 2346.891 2669.5526 1843.30145 3234.9102 2178.14725 2134.65115 2914.10885 1551.79195 2095.3699 2345.09775 3078.46465 1866.3635 219718713 phdCI Organic Remediation Aromatics Polycyclic aromatics Stenotrophomonas sp. SKA14 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas; 4602.3215 4248.8521 4257.4667 4486.7202 1531.7788 5632.897 5702.1943 2876.0115 4980.8173 4800.5572 3654.5026 2744.1077 58616377 TerD Metal Resistance Tellurium Azoarcus sp. EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 2611.1177 3647.1742 3249.1243 2771.4065 2465.0809 3496.1968 3036.2381 3993.3448 4862.3592 2964.067 4242.8891 3943.3125 221736077 pstA Stress Phosphate limitation Agrobacterium vitis S4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium vitis; 3095.2311 1840.9042 2505.008 2935.8316 3292.1338 2521.0618 1812.3763 2110.3315 2459.6496 2818.8139 3070.1762 2862.2334 83362219 pcc Carbon cycling Carbon fixation Rhodobacter sphaeroides ATCC 17025 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 1073.0659 1050.2669 859.24 1245.3516 2286.7854 1129.6783 1748.2921 711.6223 1279.7638 1080.287 1446.161 1095.4844 219542605 clpC Stress Protein stress Chloroflexus aggregans DSM 9485 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aggregans; 625.1158542 600.2772 711.7097 424.1013053 381.9645343 502.7098 698.8076 662.6247923 88808575 pstB Stress Phosphate limitation Synechococcus sp. WH 7805 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 6146.38415 5445.49275 7327.51545 3744.9581 3641.06505 5309.3102 4834.62065 7996.9842 5617.4724 5455.0507 5505.0817 7423.60465 149783479 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 926.4658 740.8991 941.0863 863.543 696.9204 254474355 fnr Stress Oxygen stress Ruegeria sp. R11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 1533.4982 1964.4433 1631.3739 1919.2698 2513.8448 1938.993 1871.0809 1567.1644 1703.4123 2202.8725 2172.1605 2135.4626 120608404 pilin virulence pilin Acidovorax sp. JS42 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax; 664.7241 559.4364 903.0038 945.4306 609.908236 1210.4872 1152.8152 1153.6461 621.1562 1161.1098 904.1179 843.3859 55978147 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1929.348 2126.5541 2707.8047 1646.648 1365.0486 1833.5063 1846.8443 3841.1577 2337.5921 2106.2827 2493.3454 2844.1616 254511749 sigma_70 Stress Sigma factors Rhodobacteraceae bacterium KLH11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 1276.9951 1549.3546 1432.1829 1860.6581 1442.8965 1540.9912 1288.921 1084.2402 1608.5084 1580.7338 1570.1039 1652.6881 307633084 sir Sulphur sulfite reductase Ferrimonas balearica DSM 9799 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Ferrimonadaceae;genus:Ferrimonas;species:Ferrimonas balearica; 2872.493183 2531.060056 1910.3285 2920.08876 4984.1017 2207.277676 1990.175724 1732.2182 2437.777389 2120.575295 5507.7364 2457.217012 255048659 grpE Stress Heat shock Neisseria sicca ATCC 29256 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Neisseria;species:Neisseria sicca; 2037.6123 7589.2111 6516.423 3947.791 3461.4993 7511.0627 6560.2017 6540.3621 8270.9661 6470.4215 1954.858 8058.252 126711044 pcaG Organic Remediation Aromatics Other aromatics Sagittula stellata E-37 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 2233.0926 1134.457 1801.7331 2108.9394 800.4133172 1332.6053 1245.3456 1684.0553 1257.9337 1650.1556 801.7249664 1659.7603 21437253 xylanase_fungi Fungi function carbon degradation Talaromyces emersonii superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces; 1406.8048 708.5841403 943.0335 586.9201 1039.352297 63029731 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1501.2473 1553.5596 1497.6979 1324.8109 2105.2289 1379.0595 1245.8388 1494.5387 1306.6262 1253.7466 2398.5684 1765.3758 148255072 sox Sulphur Sulphur oxidation Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 566.8832 696.4061 1181.6531 898.0234 938.3643 911.9896 673.3941 1271.1423 686.798 744.8357 671.2233327 599.9526 148259851 NADH_ubiquinone_oxidoreductase Bioleaching Electron transport Acidiphilium cryptum JF-5 513.6137118 875.248 608.8510664 831.4304 800.3635 452.2189 784.0484 211582349 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 891.7836 1523.8694 1077.2741 1207.3957 1283.7312 2094.1645 1734.1837 1439.7427 1030.395 1631.6974 1784.3814 156448630 chnB Organic Remediation Other Hydrocarbons Methylobacterium chloromethanicum CM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium chloromethanicum; 2431.9846 1751.9612 2412.4496 2959.9392 969.1546 1441.487 1750.0012 2185.5838 1987.6347 1906.0013 1655.103 2682.9439 62003517 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 7696.572 6608.401188 7926.89845 8227.79505 6373.7124 7354.59005 6596.39025 7533.9837 6347.4297 9703.41015 6168.6773 7041.19305 4996784 gyrB other category gyrB bacterium rJ12 superkingdom:Bacteria; 1202.4593 1626.1667 1034.6007 591.8564 1708.1025 1694.0539 824.8929 1248.0957 1835.255 1150.7473 106769175 FTHFS Carbon cycling Acetogenesis Roseiflexus sp. RS-1 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus; 2289.8843 1945.8392 2558.3097 1770.3092 1705.5998 1461.3938 1773.1137 4736.8376 1599.9931 1973.9156 4107.7027 2581.4343 149949004 dmsA Organic Remediation Others Alkaliphilus metalliredigens QYMF superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Alkaliphilus;species:Alkaliphilus metalliredigens; 703.82957 463.1948059 551.8381143 464.5339634 973.6556 640.2819034 419.2330884 768.4485 86566407 ureC Nitrogen Ammonification Frankia sp. CcI3 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 8301.9254 14585.3326 10089.6179 11812.7044 10896.121 13376.9936 10413.4985 8241.7992 12686.9614 13113.4764 8103.2345 14313.3917 113867992 fnr Stress Oxygen stress Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 2468.4533 1902.8203 1932.8065 2320.1826 2408.8721 2582.936 1802.1563 1793.6716 1565.8151 2378.3644 2696.5215 2611.9888 156072118 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 2052.1595 2000.046 663.4658 1868.5479 1053.6572 803.4219 1137.6057 1256.8592 1023.5221 868.2138 2589.5159 1116.3987 229207531 sigma_24 Stress Sigma factors Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiopsaceae;genus:Nocardiopsis;species:Nocardiopsis dassonvillei; 2467.822 4609.4282 3159.9391 3000.8948 4702.9128 3906.7768 3304.1482 2458.0146 3653.5607 3725.3509 3418.0524 4486.1523 111220927 trzN Organic Remediation Herbicides related compound Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 3539.9208 2775.7873 3286.2727 3317.0063 4815.267 4383.5534 2821.0337 3862.7881 3836.6587 3738.036 1741.9519 3152.7962 119882220 endochitinase Carbon cycling Carbon degradation Chitin Salinispora arenicola CNS205 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora arenicola; 2353.0161 2843.7051 3762.1791 4188.2785 2335.9096 3024.3708 3748.7227 2527.4568 2318.8489 3632.7252 2451.1102 1922.6936 222438025 NirB Nitrogen Assimilatory N reduction Labrenzia alexandrii DFL-11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia alexandrii; 492.4415 658.8028 502.0500742 564.9544 636.5845 710.4544 687.5668 571.0299 678.172 228993479 narI Stress Oxygen limitation Bacillus pseudomycoides DSM 12442 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus pseudomycoides; 638.8706059 562.0656 456.134229 561.5163 1134.89686 832.8609 564.9251558 553.3532841 727.5785831 67922889 nifH Nitrogen Nitrogen fixation Crocosphaera watsonii WH 8501 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Crocosphaera;species:Crocosphaera watsonii; 4534.9585 1918.1283 2465.5187 4100.8746 2225.8116 2866.1333 4422.9657 7809.2732 2294.5725 2992.7536 2037.06996 3263.3416 209518780 nitA Organic Remediation Aromatics Other aromatics Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 2018.9952 1769.0235 1615.0461 2410.5178 3063.3301 2115.1631 2114.9723 2932.2358 2214.7424 2468.232 1754.0843 2229.1859 214043561 gyrB other category gyrB Roseobacter sp. GAI101 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 907.6942 644.62675 992.4217 1023.7804 1162.0299 522.8718 882.0892 843.922 560.70405 682.9512 699.8846819 900.7047 206677616 vanA Carbon cycling Carbon degradation Others Rhodobacterales bacterium HTCC2083 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 1187.9524 1750.0243 926.7759 809.2224 1406.4752 1085.0936 1346.0312 1029.1174 1257.8172 1278.0337 1392.0336 794.9382 238759193 ureC Nitrogen Ammonification Yersinia aldovae ATCC 35236 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia aldovae; 3778.6395 3404.4412 3784.0465 3254.8744 5255.4695 3734.944 2782.2643 3565.9187 2770.2452 3227.2268 4883.8896 3952.9252 110285187 nmoA Organic Remediation Aromatics Nitoaromatics Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 648.7434013 704.0024466 991.3021 770.3625 1070.2847 572.432772 916.0353 542.2714 863.1279 509.7371418 2082.648 167630152 pstC Stress Phosphate limitation Heliobacterium modesticaldum Ice1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Heliobacteriaceae;genus:Heliobacterium;species:Heliobacterium modesticaldum; 358.4899324 891.0996 398.7069556 897.9046 722.5233 9379.306164 333.1236531 494.1154 937.3439 771.7305 154250855 phoB Stress Phosphate limitation Parvibaculum lavamentivorans DS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Parvibaculum;species:Parvibaculum lavamentivorans; 1150.7046 1231.1602 2111.0751 1216.3813 973.7997 1916.9175 1515.3203 1759.3802 1799.6209 1590.8394 706.9959639 1615.1851 89357951 ChrA Metal Resistance Chromium Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 3010.339 2377.0472 3064.9963 3910.1228 1712.8613 3715.5607 3545.3785 3852.4147 2462.9812 3745.6292 1711.6088 2582.9037 111151694 pimF Organic Remediation Aromatics Aromatic carboxylic acid Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 2354.7757 1588.9074 2048.221 2696.6317 1033.2378 2763.6677 2364.1974 2196.0661 1796.4291 2538.5695 1280.151 1597.4292 119957191 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 2837.5191 2656.7463 2812.111 2485.7446 3331.5127 2920.5143 2834.9241 2894.5794 2343.6495 2387.2976 3225.6153 2678.0277 912436 amyA Carbon cycling Carbon degradation Starch Geobacillus thermoglucosidasius superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 596.6526522 1289.9289 939.876 718.1749 834.8642 1231.0371 1216.8765 1020.6323 1209.2994 1365.7461 794.1573 1199.7678 206896194 glnA Stress Nitrogen limitation Coprothermobacter proteolyticus DSM 5265 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermodesulfobiaceae;genus:Coprothermobacter;species:Coprothermobacter proteolyticus; 2040.9435 1815.7377 2132.7244 2095.2282 3523.2505 2158.3419 2012.7726 1867.2051 1606.6329 1605.1883 3268.339 2173.4051 169793388 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1372.8211 1502.54475 806.4642764 1039.1079 1932.2611 673.4629 1020.9107 717.2017 581.8947227 2020.1328 259169062 narH Stress Oxygen limitation Lactobacillus antri DSM 16041 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus antri; 2882.7792 2238.6185 2076.7474 2047.3485 1359.4935 3009.0331 2979.296 1690.2285 2604.3993 2631.07235 2280.48745 1656.27915 223481905 atzA Organic Remediation Herbicides related compound Alcanivorax sp. DG881 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax; 2188.4167 3032.2949 2168.5497 2514.9478 1744.429 3404.784 2973.4845 2394.4309 3127.5414 3661.1885 1638.4299 3513.9432 118424365 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 6864.8845 6455.1236 4234.6979 6463.3004 5337.9245 4545.1411 4107.3738 3733.5387 5022.9282 4367.0979 10300.6208 5534.6308 116197296 sulfate_transporter Fungi function Sulfur Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 1935.2582 1795.3241 2085.4275 1858.2473 2014.9246 1804.0274 1381.1645 1550.4847 1517.9612 1554.3474 3067.0049 1714.4974 115422714 ZntA Metal Resistance Zinc Bordetella avium 197N superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella avium; 861.3864 2052.609 1641.8859 1312.2092 1567.8019 2032.3352 1830.9121 1708.1791 2296.5179 2185.8213 1116.3272 2429.4035 291184659 phospholipase_A2_fungi Fungi function carbon degradation Trichophyton verrucosum HKI 0517 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Trichophyton;species:Trichophyton verrucosum; 1318.5546 740.4444 1031.4166 918.3095 1144.5303 1139.1307 740.9996 732.5869 697.282 963.2403 1332.7649 1195.9502 94311913 sped_bac soil_benifit Cupriavidus metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 951.3828 868.5581 1291.6443 884.093 1208.405 1042.1541 1008.9556 692.6428 695.8492 690.1089 1306.1456 7129.024183 118168203 mhpA Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium avium 104 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium avium; 1443.698201 2473.64833 1412.82096 1510.718297 4536.5618 4134.7406 1775.7461 1243.920596 1675.799406 2772.8416 3340.1406 2955.5722 315046152 acc soil_benifit Arthroderma gypseum CBS 118893 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma;species:Arthroderma gypseum; 1377.8448 1284.2967 2048.41 792.484 1372.5566 1132.2359 929.7919 3043.0504 1264.6784 1275.9902 2583.702 1411.9875 167588014 TerD Metal Resistance Tellurium Burkholderia ubonensis Bu superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ubonensis; 1022.8426 500.3504211 673.7598 872.8474 352.9512973 438.7580948 491.9214864 664.1246 465.31907 187921394 pcaG Organic Remediation Aromatics Other aromatics Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 2588.3097 4086.2444 3605.4144 3533.3313 2056.9579 4296.9565 6254.073891 2764.87 4057.674 4631.6423 3062.1039 4247.8686 193086211 sox Sulphur Sulphur oxidation Chlorobaculum parvum NCIB 8327 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobaculum;species:Chlorobaculum parvum; 2166.3206 1235.0212 1165.4852 1627.896 1624.3393 536.3734259 2142.1568 1044.5382 588.6190227 971.1461 1064.938497 1727.0351 260774244 amyA Carbon cycling Carbon degradation Starch Vibrio metschnikovii CIP 69.14 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio metschnikovii; 952.417 1022.5263 842.7522 858.5198 1608.5649 1050.9036 911.2064 625.7909 1006.9108 1106.517 996.3231 86357130 ppx Phosphorus Phosphorus utilization Rhizobium etli CFN 42 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 3851.0396 3121.085 2763.5491 2508.0168 2219.6497 2759.1061 2011.5338 1688.8607 2992.3205 2204.1678 3451.8791 2836.9934 56967347 mcrA Carbon cycling Methane Methane production uncultured archaeon superkingdom:Archaea; 1782.345 685.7403 1667.2764 524.0027302 924.7174 1059.7687 1004.9814 508.278 1052.8175 877.5245 133912675 pcaG Organic Remediation Aromatics Other aromatics Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 3648.6149 1562.8999 2392.5887 2798.2674 1585.0741 1417.6617 1778.195 2099.9823 2366.3533 2216.6072 1423.1935 2359.6295 297191137 cat_bac soil_benifit Streptomyces pristinaespiralis ATCC 25486 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces pristinaespiralis; 9398.4441 9694.1155 10970.3327 9075.3773 14290.8258 9277.6097 10439.318 6838.4782 10117.7186 7373.0838 11630.4787 6668.2362 112464191 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 1173.8888 733.9457 1437.1555 918.6245 691.7374488 745.9299 1059.6349 2205.0958 1071.9351 1440.5167 1410.477 218529351 ureC Nitrogen Ammonification Methylobacterium chloromethanicum CM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium chloromethanicum; 439.7893804 557.1048955 1397.659 326.2624498 396.219041 758.4086104 410.1701432 257386184 pstB Stress Phosphate limitation Halomicrobium mukohataei DSM 12286 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halomicrobium;species:Halomicrobium mukohataei; 834.0564428 602.7753354 914.2719 851.6813 556.2042623 537.3116262 629.8883 926.7687 86751201 phn Organic Remediation Herbicides related compound Rhodopseudomonas palustris HaA2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 839.3843 692.7108 882.8812 609.9508 681.9768 684.0729 1110.8817 491.9346 771.5458 913.9427 55230976 ahpF Stress Oxygen stress Haloarcula marismortui ATCC 43049 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloarcula;species:Haloarcula marismortui; 976.3803 1258.6077 780.6344684 954.2903 700.4726152 1109.7101 692.7033 845.3866 954.3853 76558586 alkK Organic Remediation Others Natronomonas pharaonis DSM 2160 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Natronomonas;species:Natronomonas pharaonis; 607.9189 1161.2418 1400.3415 949.1709 1071.5487 1253.0948 1118.2163 1578.3106 1092.6143 145575973 alkB Organic Remediation Other Hydrocarbons Pseudomonas mendocina ymp superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas mendocina; 1597.3688 792.6124 1086.274 1063.0786 972.7759 728.805 1057.3141 731.9615082 724.028 867.019 1303.0626 225683239 nirK_fungi Fungi function nitrogen Paracoccidioides brasiliensis Pb03 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Paracoccidioides;species:Paracoccidioides brasiliensis; 6181.6507 3414.1765 5017.5619 5626.7789 5740.7009 4395.3539 4207.8301 2675.6737 6588.6384 5033.3665 7068.0624 4302.1113 82723184 gyrB other category gyrB Clostridium beijerincki NCIMB 8052 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium beijerinckii; 635.5259446 381.0798068 488.6591643 391.5020683 772.184 516.6201 299.5572481 544.7975 1185.6382 495.461474 139003913 integrase_tyrosine Bacteria phage REPLICATION Ralstonia phage phiRSA1 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:P2-like viruses; 899.9908 1148.6776 1136.4498 1008.6446 1613.8167 1158.2149 962.593 1214.9421 1162.226 1154.2871 1686.1187 1620.5133 261312373 glnA Stress Nitrogen limitation Mannheimia haemolytica serotype A2 str. BOVINE superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Mannheimia;species:Mannheimia haemolytica; 1826.1611 1297.7146 1682.6692 1976.5665 1385.901714 1454.0653 1279.1368 1126.3873 716.0252 1567.3452 3778.1812 1462.4951 50871758 Arylest Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 1362.5588 1105.7352 1059.943 1386.0388 1028.8771 1043.5002 1180.1717 1227.1311 844.3382 1196.0049 1947.05 1011.0442 154089492 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Parabacteroides merdae ATCC 43184 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Porphyromonadaceae;genus:Parabacteroides;species:Parabacteroides merdae; 1341.9134 1222.0147 1440.6235 1118.3851 721.6056953 825.2485 469.3215518 843.1151 955.9597 1492.4804 1145.5113 2644993 dnaK Stress Heat shock Planctomyces maris superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Planctomyces; 1341.7253 1354.2533 1853.1301 1073.9818 1886.8151 960.3881 1378.1593 1020.6565 1110.8193 910.6686 2327.5276 1345.317 120553185 merB Metal Resistance Mercury Marinobacter aquaeolei VT8 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter hydrocarbonoclasticus; 510.5108332 719.7795807 612.3342 420.4563336 746.9729002 808.0114 149752407 ChrA Metal Resistance Chromium Dorea longicatena DSM 13814 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Dorea;species:Dorea longicatena; 1255.7855 2437.3577 1887.5306 1662.0714 1029.248256 2456.3908 1947.9773 2014.5867 6629.0486 2378.4203 2191.0438 2306.8286 108464954 pilin virulence pilin Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 6686.517 6205.4333 8892.2185 3737.5614 3432.3774 7123.8594 6026.2282 9294.193 8000.571 6881.224 2955.6268 8244.0232 268313944 cap virulence capsule Thermomonospora curvata DSM 43183 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Thermomonosporaceae;genus:Thermomonospora;species:Thermomonospora curvata; 4076.8231 4002.6787 4438.9776 4097.4502 5425.9537 4075.4838 3104.7153 4209.9507 4386.2284 4100.6218 4786.4698 4212.2469 209530333 sigma_32 Stress Sigma factors Gluconacetobacter diazotrophicus PAl 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter;species:Gluconacetobacter diazotrophicus; 1060.0635 2121.4188 837.2999 763.8973 1856.4798 1388.2426 2199.1409 856.4499 1698.9974 1123.3448 1436.7434 673.7502 151563810 CadA Metal Resistance Cadmium Ochrobactrum anthropi ATCC 49188 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum;species:Ochrobactrum anthropi; 442.9728532 975.1495 521.2045 1101.4921 592.1599713 822.14 852.286 849.8831 900.9315 524.1345216 302383736 sod_CuZn soil_benifit Brevundimonas subvibrioides ATCC 15264 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Brevundimonas;species:Brevundimonas subvibrioides; 3804.5639 5254.6093 4098.7391 3269.7499 7934.4709 5058.1717 4243.1698 4770.6085 4950.9261 5230.3091 2590.7171 3213.1636 188534426 cydB Stress Oxygen limitation Erwinia tasmaniensis Et1/99 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Erwinia;species:Erwinia tasmaniensis; 625.5322578 645.878421 488.8313 435.1804 525.9061572 707.8608495 650.7463506 262340153 pstA Stress Phosphate limitation Vibrio sp. Ex25 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 3150.7468 2681.1483 3117.7164 2929.2979 4003.1922 2888.6574 2458.4942 2425.3936 2353.7724 2858.2538 4814.6026 3215.4294 71737876 pimF Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas syringae pv. phaseolicola 1448A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas savastanoi; 3744.0917 1757.9629 2444.6982 3021.7699 1774.6125 1775.775 1843.3688 2342.0557 2252.2287 2752.5856 1771.6704 1682.6659 157837335 Pg_Oomycetes soil_borne_pathogen oomycete carbon degradation Phytophthora parasitica superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 987.838 624.8185 954.3864 1010.7541 738.0928 1445.306 1117.0549 629.5435 1141.107 708.4107 159881072 sigma_38 Stress Sigma factors Hydrogenivirga sp. 128-5-R1-1 superkingdom:Bacteria;phylum:Aquificae;class:Aquificae;order:Aquificales;family:Aquificaceae;genus:Hydrogenivirga; 836.6172 1905.458 1084.7329 2996.813 3364.8625 1886.8404 2148.0639 886.3233 2006.273 1369.7214 943.7584086 1722.833 196112771 phzF soil_benifit Alteromonas macleodii 'Deep ecotype' superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Alteromonas;species:Alteromonas macleodii; 733.0987145 338.5323088 505.3941667 1035.0398 396.3985522 944.8353 357.6212942 451.2362 237785907 hrcA Stress Heat shock Corynebacterium kroppenstedtii DSM 44385 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium kroppenstedtii; 2378.403428 1946.990838 4036.5101 2207.119963 4771.6601 2259.130747 2224.0943 4685.0071 2222.534801 2153.745226 5688.7378 2651.769407 159177623 pstA Stress Phosphate limitation alpha proteobacterium BAL199 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 1047.7595 678.2045311 677.5282939 676.3868 34556965 perR Stress Oxygen stress Wolinella succinogenes DSM 1740 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Helicobacteraceae;genus:Wolinella;species:Wolinella succinogenes; 603.2848 171913554 TerD Metal Resistance Tellurium Verrucomicrobium spinosum DSM 4136 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobiaceae;genus:Verrucomicrobium;species:Verrucomicrobium spinosum; 2226.4436 2258.7581 1286.1154 1569.8495 1000.3812 1234.3456 1336.3601 892.9842 961.4425 3238.1322 658.6309 126347932 nmoA Organic Remediation Aromatics Nitoaromatics Streptomyces ambofaciens ATCC 23877 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces ambofaciens; 2357.0861 666.7542 978.1875 1876.3417 1213.998 787.5533 877.3004 932.4163 1036.8718 1186.1896 2161.6377 763.4911 119864997 mer Metal Resistance Mercury Psychromonas ingrahamii 37 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Psychromonadaceae;genus:Psychromonas;species:Psychromonas ingrahamii; 433.6507851 646.6592 610.0332 819.8588 661.6601 644.0925 604.5448 718.9184 616.4451 145046536 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 983.1098 2205.7873 1367.206 858.6704 2380.4455 2153.7354 1456.6501 1762.14 1697.2034 1697.3338 2170.0944 1552.6755 238794211 hly virulence hemolysin Yersinia intermedia ATCC 29909 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia intermedia; 824.7431 548.7836 541.182 426.8403 261.0715323 49530951 pimF Organic Remediation Aromatics Aromatic carboxylic acid Acinetobacter sp. ADP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter; 1255.6914 638.4148 822.8913 1003.9327 793.5514 806.8618 575.5301 858.6892 465.7594 630.9379 1492.6006 934.7335 237757930 pstB Stress Phosphate limitation Corynebacterium kroppenstedtii DSM 44385 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium kroppenstedtii; 1710.2941 973.1999 1264.5136 1545.478 835.8501 691.7134 854.704 884.9313 677.8516 698.4503 1596.7232 942.7669 15155547 glnA Stress Nitrogen limitation Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 8584.8767 7466.0543 9340.9507 5477.7498 3761.8183 8689.1097 6410.6643 9259.8532 8667.5891 7683.0681 2443.5424 9149.9188 112462241 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 1003.7418 1291.3815 1085.62331 1306.2097 1408.7314 974.0211181 858.4089 1688.5581 1060.391 1273.2767 1600.7661 254951809 fnr Stress Oxygen stress Dyadobacter fermentans DSM 18053 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Dyadobacter;species:Dyadobacter fermentans; 621.0727094 601.7559285 775.1566 656.4158956 546.7121 663.0824 662.6726 899.4810686 568.8880955 189464206 mannanase Carbon cycling Carbon degradation Hemicellulose Bacteroides intestinalis DSM 17393 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides intestinalis; 2019.6265 1744.2647 2489.3199 2120.7741 717.2203 1132.191 1577.3742 2372.4132 1437.7234 1744.2888 906.7845474 1447.5681 148550685 katE Stress Oxygen stress Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 2658.0233 4644.2791 3739.2649 2578.64805 3883.143106 3890.2875 3358.86115 3782.2523 4013.10515 3612.77635 2309.7614 3170.29805 193160560 AprA Sulphur adenylylsulfate reductase uncultured bacterium superkingdom:Bacteria; 1376.3403 625.5958 1034.0809 1141.5347 744.0305 630.8625 793.2535 792.7567 755.589 1219.7772 1012.4861 86144640 katA Stress Oxygen stress Vibrio sp. MED222 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 655.617 471.0031 2966.290005 651.9248602 634.9115 544.6094706 728.9682 242804434 MFS_antibiotic Antibiotic resistance transporter Talaromyces stipitatus ATCC 10500 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus; 3379.2436 1819.575608 4296.4616 3319.3075 3828.063 3710.9541 2495.073524 2852.9891 1907.100006 2724.6472 4232.2943 3264.2754 166087375 mer Metal Resistance Mercury Microcystis aeruginosa NIES-843 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Microcystis;species:Microcystis aeruginosa; 1884.7259 2897.2111 2128.32625 1764.786456 2347.0199 3179.303 3362.4055 3037.4704 2502.7973 1818.161835 2368.98205 1717.70395 29609644 amyA Carbon cycling Carbon degradation Starch Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 640.8818 1063.1369 628.2507 849.027 597.0999 677.661 1808.8141 680.1348 1155.3702 1037.5476 120405368 bphA Organic Remediation Aromatics Polycyclic aromatics Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 1992.37235 2098.29105 1251.7407 1858.6377 1844.668 1351.3754 1542.64235 1409.34285 1676.9925 1615.9974 1886.555833 1600.0864 126707749 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Sagittula stellata E-37 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 2412.266 3445.4977 3090.8911 3424.6141 3880.979 3599.4849 4192.9188 2486.8712 2995.0464 3145.0864 4786.1815 3277.5683 18860818 alkB Organic Remediation Other Hydrocarbons Pseudomonas fluorescens superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 3677.4675 2828.4522 3528.0207 1973.4572 1753.9277 3122.0354 2917.4409 3864.6521 2773.0875 2773.8242 895.420911 3921.9725 260418800 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Citreicella; 14468.8005 10348.8535 12536.686 13891.112 12167.9456 12871.5309 9671.1798 6935.7845 12200.5018 11908.4043 13203.2013 14297.3386 194339726 sigma_24 Stress Sigma factors Streptomyces sp. Mg1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 3016.5447 2423.5321 2242.1486 3390.0963 1710.3587 2743.9254 3129.9957 2981.2218 2333.9692 3044.7335 928.7910821 1871.8152 124260399 sox Sulphur Sulphur oxidation Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 2320.3488 3015.5384 2571.8024 2233.9567 1633.4209 2857.5185 2820.919 2838.343 3603.2373 3739.912 1492.7447 2955.5996 28864395 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 784.5268 913.4883 576.3180087 444.1835422 596.7042 1262.591539 666.5254 584.0622897 677887 endoglucanase Carbon cycling Carbon degradation Cellulose Macrophomina phaseolina superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Botryosphaeriales;family:Botryosphaeriaceae;genus:Macrophomina; 12448.2472 8679.8081 4674.6772 11081.8866 8750.2238 4708.9424 10997.0808 5401.4227 5514.4667 6837.5967 6982.8231 7542.3139 118673628 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 5084.4066 2934.6742 3687.8824 5691.5955 18312.86971 4270.3642 3738.6175 5639.9132 4249.2058 4162.8077 3683.5964 4258.6759 51858013 FTHFS Carbon cycling Acetogenesis Symbiobacterium thermophilum IAM 14863 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XVIII. Incertae Sedis;genus:Symbiobacterium;species:Symbiobacterium thermophilum; 1160.8057 1275.4916 944.2378 1793.8185 1589.7338 914.4983 1353.4029 1275.442 918.5075 682.0344032 902.998 256585538 ahpC Stress Oxygen stress Saccharomonospora viridis DSM 43017 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharomonospora;species:Saccharomonospora viridis; 2310.0865 3591.8715 3038.6216 2190.7136 5327.4589 2491.2689 3759.998 1842.355 2926.3759 1931.1258 2696.5215 1935.1214 91693323 vanA Carbon cycling Carbon degradation Others Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 1593.9167 722.1588 927.2121 1341.8917 888.2732 743.5519 993.3791 950.0765 569.9825 791.5784 991.6395 1179.4714 83574258 gyrB other category gyrB Rhodospirillum rubrum ATCC 11170 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum rubrum; 2924.1708 4360.3877 19900.1794 2809.1295 2429.6455 4668.4856 3615.8402 5081.4825 5659.659 4259.1295 1436.5271 4975.6281 77960187 AceB Carbon cycling Carbon degradation Others Yersinia mollaretii ATCC 43969 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia mollaretii; 2433.6502 2582.9542 1859.4112 2354.3991 4325.0177 2205.0803 2977.5621 1190.6731 2624.0802 2477.07025 1423.24155 1582.28925 49036626 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 467.6212608 5830.921459 510.6977509 420.3084961 504.5524 395.1340556 556.3532 480.9055 507.3965 119474993 sigma_70 Stress Sigma factors marine gamma proteobacterium HTCC2143 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 1253.0721 1215.8946 1384.0136 1121.9917 882.62172 1294.4368 1819.6484 1129.3286 1084.6674 1188.3671 2006.3907 1164.2697 94552065 pilin virulence pilin Candidatus Koribacter versatilis Ellin345 superkingdom:Bacteria;phylum:Acidobacteria;genus:Candidatus Koribacter;species:Candidatus Koribacter versatilis; 23800.8756 15097.5196 22871.0906 14551.6067 16826.5689 16782.316 14914.565 30069.4217 19184.2954 16972.1547 29331.23 19227.1556 58265382 sulfate_transporter Fungi function Sulfur Cryptococcus neoformans var. neoformans JEC21 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Tremellomycetes;order:Tremellales;family:Tremellaceae;genus:Filobasidiella;species:Cryptococcus neoformans; 842.0573 676.163603 369.5454821 452.433 550.9973 743.5614069 799.7994 238792479 narI Stress Oxygen limitation Yersinia intermedia ATCC 29909 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia intermedia; 2646.6864 1694.9765 2051.4342 2946.1184 806.9178 1672.7112 1532.3307 1678.56 1421.9274 1944.7377 1653.3972 1153.8743 222120569 pstC Stress Phosphate limitation Macrococcus caseolyticus JCSC5402 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Staphylococcaceae;genus:Macrococcus;species:Macrococcus caseolyticus; 822.3521 718.489 878.1704 771.9377 905.7349 722.9667075 652.071 926.5821 628.0175 668.4907 1415.9621 828.4726 85109751 pheA Organic Remediation Aromatics Other aromatics Neurospora crassa OR74A superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Sordariaceae;genus:Neurospora;species:Neurospora crassa; 4152.5947 2166.7696 1636.9571 3524.6197 3207.9155 2746.0044 3777.9718 1730.9352 2205.5747 2191.0361 2472.9005 2717.2335 110824023 katE Stress Oxygen stress Rhodococcus jostii RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1694.847 2994.698 1931.53435 1920.8587 3098.30095 3059.83215 2382.57275 2182.29745 3391.11605 2744.3839 1547.2565 2070.92055 194719525 exoglucanase Carbon cycling Carbon degradation Cellulose Hypocrea virens superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Hypocreaceae;genus:Hypocrea; 965.7687 822.5702 650.0895 670.1651 747.9347 746.6179 340.7813539 938.9163 819.293 592.101 938.5210456 496.230483 13536999 phytase Phosphorus Phosphorus utilization Aspergillus oryzae superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus; 936.8759 1092.6105 397.7983575 582.174 521.470455 219542176 GcdB Organic Remediation Aromatics Aromatic carboxylic acid Chloroflexus aggregans DSM 9485 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aggregans; 3347.3151 4758.2868 3573.0786 4361.7576 3175.7033 5991.8329 3789.2356 3498.9942 4178.0891 4230.3424 3525.8748 4387.1421 133778506 endochitinase Carbon cycling Carbon degradation Chitin uncultured bacterium superkingdom:Bacteria; 2975.5494 3402.6828 19496.68019 2799.1577 2295.886 4267.1037 3131.1198 4000.9462 4026.0005 3143.1099 2273.8086 4562.82 207722924 avrBs3 soil_borne_pathogen secretion system type III Ralstonia solanacearum MolK2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 3568.5047 2728.1301 1538.2194 3673.9638 3103.4674 2737.6139 1849.9986 1522.1728 2556.5455 2291.6458 5717.1829 2027.9932 171678946 ara_fungi Carbon cycling Carbon degradation Hemicellulose Podospora anserina superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Lasiosphaeriaceae;genus:Podospora;species:Podospora anserina; 646.8135721 490.7193 474.5405193 10005.14881 461.5464413 66840897 pmoA Carbon cycling Methane Methane oxidation uncultured bacterium superkingdom:Bacteria; 564.9221 866.927 589.3726 439.0461058 426.2510843 557.6251 1056.3641 490.2222 515.3651 897.1748 459.5652353 251776394 ahpC Stress Oxygen stress Geobacter sp. M21 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 2121.1075 3414.3422 3643.1686 2434.5707 3025.5817 2980.3096 3534.5506 4308.2011 3553.4614 3495.3667 2623.9432 3968.6213 92117008 CODH Carbon cycling Carbon fixation Nitrobacter hamburgensis X14 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter hamburgensis; 571.1681 1444.6107 1041.2889 615.1011 1539.5143 1085.6919 1205.7044 724.4528 1071.1896 761.3844 837.7619 832.5511 118433913 phn Organic Remediation Herbicides related compound Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 978.1802 1304.2307 1714.394054 1295.8604 903.6445 566.1016949 611.2289792 27805138 B_lactamase_A Antibiotic resistance Beta-lactamases Escherichia hermannii superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia; 998.7585 799.5316 877.2544 1544.4507 743.9153 734.3986 816.1526 554.9083 615.7744 1057.3176 542.9771 78697882 ZntA Metal Resistance Zinc Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1485.7195 1074.3376 1482.4459 1906.2434 981.1624 683.9123 902.0588 1047.8218 715.5573 888.7420719 448.6343225 113933454 linB Organic Remediation Pesticides related compound Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 1991.5933 2032.8963 2939.2006 2213.0543 874.9067 3151.5441 2679.4337 1289.4439 2286.8493 2402.9864 2182.7313 1418.3594 124002296 clpC Stress Protein stress Microscilla marina ATCC 23134 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Microscilla;species:Microscilla marina; 1756.6758 1579.2996 2308.2742 962.0868 1527.0768 1225.937 841.5706 2438.0789 1415.6253 1084.3516 2623.0302 1225.2825 84385024 ZntA Metal Resistance Zinc Janibacter sp. HTCC2649 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Intrasporangiaceae;genus:Janibacter; 909.4874 865.0538 1152.894 719.8323 1846.7536 780.8977 999.6418 845.7134 626.9341 658.3627 1003.5557 1011.7994 169006641 ChrA Metal Resistance Chromium Paenibacillus sp. JDR-2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 1651.3801 1740.5693 1876.9604 1664.1671 1068.1802 2016.6161 1772.8384 1355.6543 2189.5807 1597.9859 783.2260234 2231.7676 117996767 phn Organic Remediation Herbicides related compound Chloroflexus aggregans DSM 9485 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aggregans; 7555.1165 4052.3619 5723.9192 7893.7466 5154.51 5239.1727 6205.6684 6963.007 5031.1174 5798.9494 5216.3901 4506.2976 37526122 proO Organic Remediation Aromatics Other aromatics Photorhabdus luminescens subsp. laumondii TTO1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Photorhabdus;species:Photorhabdus luminescens; 590.645 792.3703 666.0393 737.8309 791.6961 1606.6921 1215.511 714.1846 620.2181 828.032 647.5214 54019042 TerZ Metal Resistance Tellurium Nocardia farcinica IFM 10152 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Nocardia;species:Nocardia farcinica; 1063.0992 852.8189151 1068.80107 1478.9766 1441.5469 1891.0964 1724.762 1336.6106 1157.3243 1063.785316 2445.8411 219682687 ppk Phosphorus Phosphorus utilization Bifidobacterium animalis subsp. lactis AD011 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium animalis; 1018.7457 4211.051263 902.2623 980.4962 635.8258759 605.5906195 1115.8696 1085.3054 700.6947 949.9215 296817613 superoxide_dismutase_fungi Fungi function virulence Arthroderma otae CBS 113480 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma;species:Arthroderma otae; 2217.826104 1429.79115 2953.0131 3403.2322 1201.7153 1242.773738 1855.5124 1301.94335 1446.423387 1731.0928 955.9399074 257150762 glnR Stress Nitrogen limitation Lactobacillus rhamnosus Lc 705 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus rhamnosus; 1044.541755 1935.2119 1471.5268 829.5071638 1443.8634 798.3367 1210.6481 1620.5805 1486.7188 1496.2261 1911.3507 116620272 exaA Organic Remediation Chlorinated solvents Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 878.6872 1141.9623 1074.0914 850.2973 1243.2115 1075.9647 927.7329 1353.4519 582.5245051 1160.7954 70671751 pmoA Carbon cycling Methane Methane oxidation uncultured bacterium superkingdom:Bacteria; 2920.7187 1513.4715 1554.3146 2328.8806 2063.954 1520.6656 1333.1043 2005.8232 1537.6596 1713.2237 3496.8051 2031.3439 269993102 pmoA Carbon cycling Methane Methane oxidation uncultured bacterium superkingdom:Bacteria; 752.6922 442.7666705 438.7449475 560.518732 381.3516552 540.0593113 436.2172544 895.9734768 72121736 linC Organic Remediation Pesticides related compound Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 2169.5847 2409.3369 2518.1517 2522.139 3286.2563 3147.6704 2090.2311 2457.2642 2440.2192 2475.0212 3231.9338 2581.1734 85706704 FTHFS Carbon cycling Acetogenesis Roseovarius sp. 217 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 1135.8351 444.1301273 524.3391782 968.7164 610.0172 1517.4767 1306.6804 384.7166405 628.4031 422.7763969 60476018 rubisco Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 553.4809999 445.404386 1037.7558 679.1507 580.289 474.2251 554.9087 672.6446 647.2468 126732115 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Sagittula stellata E-37 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 992.6927882 998.241523 1044.3952 557.341988 798.7852 686.6582 629.3523 854.6298458 188532949 pilin virulence pilin Erwinia tasmaniensis Et1/99 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Erwinia;species:Erwinia tasmaniensis; 1884.1886 2004.0089 2271.9109 2088.626 1643.2798 2485.6752 1649.9005 2026.4731 1866.0897 2053.5771 2255.75 2306.8698 242780044 phenol_oxidase Carbon cycling Carbon degradation Lignin Talaromyces stipitatus ATCC 10500 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus; 1097.5127 1164.7078 1158.1718 1272.9247 1529.1813 1160.2939 855.1972 777.0096 967.9218 803.2585 2021.6704 1402.1277 120401034 gyrB other category gyrB Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 849.8212 843.2611 1020.9039 552.5560109 662.6465 694.5432 550.9248 662.5166 904.8625793 537.3331 291619364 phzF soil_benifit Pantoea ananatis LMG 20103 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pantoea;species:Pantoea ananatis; 897.99605 661.294 1012.10085 900.037 1362.3185 897.4296 716.9007 1092.689 724.1212 691.1195 1525.306 795.9681 238921752 pstB Stress Phosphate limitation Edwardsiella ictaluri 93-146 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Edwardsiella;species:Edwardsiella ictaluri; 931.4224 874.1648 1028.8722 1298.0459 1251.6706 1003.7613 1063.7604 713.6437 1079.7982 1315.3631 844.3446089 692.6047 226318181 glnA Stress Nitrogen limitation Deinococcus deserti VCD115 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus deserti; 12791.9797 7175.8935 9555.6989 12958.1736 6734.1616 10606.5507 12080.7993 11935.3937 23005.60312 10255.7698 7292.308 7702.9 156231864 spe soil_benifit Roseiflexus castenholzii DSM 13941 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus;species:Roseiflexus castenholzii; 1735.9095 3951.0714 2571.1045 2857.6735 2318.4668 3946.1119 3489.3465 1979.097 3192.4609 4014.294 3692.9856 119373652 sigma_24 Stress Sigma factors Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 1486.13595 1019.3598 1211.40085 1455.0675 1494.22 1125.50555 1519.7593 2146.208316 1327.2274 1133.24945 2145.5893 1032.961 170141342 Catechol Organic Remediation Aromatics Other aromatics Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 4031.5563 2110.2563 3386.4788 3540.9061 3203.953 2642.1778 2146.8825 4585.1832 2413.4499 2744.825 4248.4388 4123.7144 67858044 sigma_24 Stress Sigma factors Crocosphaera watsonii WH 8501 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Crocosphaera;species:Crocosphaera watsonii; 820.6106358 857.2044 701.0504 902.39975 840.7306992 1007.0069 613.6530476 917.516 463.9058769 682.6274 1144.243706 880.88895 46449921 fnr Stress Oxygen stress Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 3795.3896 2531.0155 3323.0867 2410.4356 3968.1929 2926.6614 2140.9295 3056.6193 2219.9145 2934.6211 43362.25903 3437.3854 119898063 cydB Stress Oxygen limitation Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 717.7279 343.9733935 696.889 574.1885333 366.7703628 611.042 730.0208 395.002621 460.9064 632.4158 227286951 cat_bac soil_benifit Mycobacterium avium 104 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium avium; 3563.9646 1050.6747 2056.4648 2790.0488 1751.2544 1154.1319 1722.0482 870.8103855 1963.6961 2351.0513 2973.8135 1403.6932 198265764 alkB Organic Remediation Other Hydrocarbons Octadecabacter antarcticus 238 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Octadecabacter;species:Octadecabacter antarcticus; 764.2037 1460.1312 1132.9022 689.8621 1642.256 1086.4846 984.55845 650.7378 884.2565088 1042.7454 728.2096867 1008.9843 158521014 APS_AprB Sulphur adenylylsulfate reductase Desulfococcus oleovorans Hxd3 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfococcus;species:Desulfococcus oleovorans; 1140.5901 610.6105 986.3442 1239.7219 1050.2445 945.7908 676.0495 1105.7737 813.8762 911.1376 1686.0467 839.8567 82795287 type_III_secretion virulence secretion Pseudomonas syringae pv. tagetis superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 7; 2394.6159 1475.6771 1579.1771 2094.9132 716.3671 1933.8181 2630.9376 2953.9993 1391.1742 2248.7778 1141.4329 1097.5442 261409352 xylA Carbon cycling Carbon degradation Hemicellulose Geobacillus sp. Y412MC10 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 610.1924859 405.0231278 671.5934 7243.996094 1149.3612 417.2902 9051.20089 154503193 tutFDG Organic Remediation Aromatics BTEX and related aromatics Ruminococcus gnavus ATCC 29149 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Ruminococcus;species:Ruminococcus gnavus; 891.4747 1161.2928 921.3963 1263.7668 845.3443 886.4192 717.4565 787.5706215 642.3163678 1135.8833 1142.4215 228894261 amyA Carbon cycling Carbon degradation Starch Cellulomonas flavigena DSM 20109 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Cellulomonadaceae;genus:Cellulomonas;species:Cellulomonas flavigena; 8767.5962 5230.9336 7369.7454 7706.1727 6093.0828 5830.993 5025.6688 5614.5668 5636.1864 5815.2078 17313.811 9290.0574 219558919 iro virulence Iron oxidation Mycobacterium tuberculosis T17 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium tuberculosis; 1208.295835 933.9528 1099.7085 1397.9283 1023.959798 1243.4186 1355.4003 848.3931483 1739.7657 1346.7177 169757212 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 3890.1008 2147.592 2970.7659 3353.0719 2063.0439 2002.5871 1979.0731 1857.6911 2134.819 2370.6596 4159.764 2721.8888 261420851 pstA Stress Phosphate limitation Geobacillus sp. Y412MC61 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 624.078 599.8063127 420.4448949 371.6019362 450.684373 414.4203497 751.5615991 223937825 sigma_24 Stress Sigma factors bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3; 423.9929077 582.9607 449.6724597 559.1507 434.6554837 85708160 oxyR Stress Oxygen stress Erythrobacter sp. NAP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 4485.6619 3174.1068 4724.6349 4440.1349 1618.9358 3114.3329 3899.7742 6805.2641 3596.5043 4482.358 2333.2695 3714.5042 116619396 pimF Organic Remediation Aromatics Aromatic carboxylic acid Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 20339.5069 19388.4222 23333.5044 16374.1034 28523.8629 25485.4547 19952.201 30921.1146 34686.0359 19025.2404 36915.8453 16757.7223 32308017 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1984.3264 877.567 1708.564 1414.5982 1952.2255 1374.6474 1140.1062 1175.1433 1375.6229 1494.5511 4297.1126 2048.0699 192292111 fnr Stress Oxygen stress Rhodopseudomonas palustris TIE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1807.4634 1391.4233 1717.8984 1868.315 2834.3747 1852.4559 1318.6862 1288.2093 1539.5351 1488.0076 3412.8871 2444.7975 116804554 nasA Nitrogen Assimilatory N reduction uncultured prokaryote 2239.0565 1824.2879 2103.0348 2010.4816 2631.6783 1898.3867 1501.4069 1703.3011 1284.6098 1634.6231 3700.0772 2110.7444 149197262 CadA Metal Resistance Cadmium Lentisphaera araneosa HTCC2155 superkingdom:Bacteria;phylum:Lentisphaerae;order:Lentisphaerales;family:Lentisphaeraceae;genus:Lentisphaera;species:Lentisphaera araneosa; 4096.4208 2136.162 1634.0928 3436.782 2562.2675 2162.1408 1559.7789 1675.6792 2571.06 1891.5072 4488.9491 1984.2008 82940315 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 4823.0007 2847.5788 4585.4484 3337.0732 3967.4535 2924.2235 2606.8616 7147.2582 3323.3483 3256.494 5675.1639 4210.2419 85860183 pilin virulence pilin Syntrophus aciditrophicus SB superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Syntrophobacterales;family:Syntrophaceae;genus:Syntrophus;species:Syntrophus aciditrophicus; 9989.0219 13775.556 10146.6272 8602.073 17017.3777 11374.1971 10024.1416 9130.6038 11649.7401 10210.4228 9981.4299 8471.1013 302680434 p450aro Fungi function organic remediation Schizophyllum commune H4-8 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Schizophyllaceae;genus:Schizophyllum;species:Schizophyllum commune; 897.9945465 1656.7361 1081.523161 887.8996247 2026.1487 864.5931 1096.1867 856.3457394 701.3089 747.3256341 222441245 glnA Stress Nitrogen limitation Labrenzia alexandrii DFL-11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia alexandrii; 1918.347 780.2031168 4515.833551 1797.6632 760.2075918 931.7151 779.5315621 877.6775 1115.8186 1514.4389 1678.7384 212530388 cellobiase_fungi Fungi function carbon degradation Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 1052.7429 705.6572 1192.6013 570.9265 585.9244653 1066.7423 883.5287 1043.091448 961.6896 882.0937 821.864572 218564186 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 824.0493237 1983.4424 1277.1193 1147.4143 963.315 2149.084 1605.0519 1176.971 2189.8952 1815.1734 1794.5158 91711656 CopA Metal Resistance Copper Methanococcoides burtonii DSM 6242 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanosarcinales;family:Methanosarcinaceae;genus:Methanococcoides;species:Methanococcoides burtonii; 4106.5622 1926.5214 2689.6304 4082.424 1408.1816 2971.0217 3928.3236 4758.0564 2104.7997 3450.8684 946.68941 1873.1747 270289710 sigma_70 Stress Sigma factors Chlamydia muridarum Weiss superkingdom:Bacteria;phylum:Chlamydiae;class:Chlamydiae;order:Chlamydiales;family:Chlamydiaceae;genus:Chlamydia;species:Chlamydia muridarum; 676.9341 924.4979 803.1612 589.6511 1161.1768 627.8753253 813.4571 599.8514 795.0982 574.4245 966.6778781 25027689 pobA Organic Remediation Aromatics Aromatic carboxylic acid Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 1232.15135 1897.21355 1773.7155 1194.74605 1690.35635 1188.823 1442.14025 2685.5084 1486.75955 1612.9155 2909.2594 1852.9195 88812887 AceA Carbon cycling Carbon degradation Others Nitrococcus mobilis Nb-231 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Nitrococcus;species:Nitrococcus mobilis; 1294.3093 1733.408 1353.757 1210.8749 2615.5438 1632.3143 1201.5522 1087.8352 1199.1066 1569.612 2557.6912 1564.3754 1906845 exoglucanase Carbon cycling Carbon degradation Cellulose Claviceps purpurea superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Clavicipitaceae;genus:Claviceps; 4123.2317 4943.1303 6804.5083 2444.2959 2246.6291 5941.5648 4121.1151 5891.3794 5730.4962 4723.7655 1536.325197 5095.8274 165880013 exoglucanase Carbon cycling Carbon degradation Cellulose uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 2596.73175 3899.83995 3381.1501 3009.40785 3127.0436 2344.83185 3011.623 4623.73661 2861.11275 3250.2352 4307.671055 2793.2146 168705280 groEL Stress Heat shock Gemmata obscuriglobus UQM 2246 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Gemmata;species:Gemmata obscuriglobus; 2401.6007 759.4945 984.22865 2083.9825 1061.4496 1053.2816 1437.58655 1231.5855 1325.3577 1153.76225 1234.6274 115254344 nmoA Organic Remediation Aromatics Nitoaromatics Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 2460.5282 1366.0784 1730.3733 1839.8241 2142.0863 1869.192 1280.3412 1231.8881 1376.1471 1423.834 3114.2853 2149.3048 161395244 SMR_antibiotics Antibiotic resistance transporter Roseobacter litoralis Och 149 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter litoralis; 709.682 493.8262166 606.0639 573.1318 691.9283 1118.2218 941.6942 520.629 551.9482789 665.1966 937.7283 681.1794 158331263 pulA Carbon cycling Carbon degradation Starch Azorhizobium caulinodans ORS 571 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Azorhizobium;species:Azorhizobium caulinodans; 4642.8333 3180.4653 3573.2385 5121.984 3307.5858 3466.0898 2942.9737 3092.2543 3642.0982 4053.8232 4193.1342 3563.105 223690165 gdh Nitrogen Ammonification Desulfobacterium autotrophicum HRM2 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfobacterium;species:Desulfobacterium autotrophicum; 2176.959 1884.025 2810.2354 1147.9759 26109.9399 1946.9796 1172.0737 3700.6634 2259.0433 2187.2283 1617.4324 2462.8006 110645041 arsB Metal Resistance Arsenic Acidithiobacillus caldus superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus; 1105.9079 1060.0404 893.3205 996.536 725.1264 848.9937 1256.43725 726.6921 1273.6889 872.2672 865.1018643 673.3657 206593476 phzF soil_benifit Ralstonia solanacearum IPO1609 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 6667.3222 2781.0245 4873.0685 6096.3163 3133.7458 1525.2871 3190.9485 3053.3027 4164.9956 4949.5176 2960.7681 4760.8405 29605635 BADH Organic Remediation Aromatics Other aromatics Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 997.5764 1756.7142 1714.7288 1345.0148 2906.1176 939.7185 1844.0341 828.9974 1364.3933 1062.979 1703.4165 1149.0543 229610695 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 847.650006 1222.6099 910.7243 718.0927 570.4155923 581.1116 635.2097 2023.6528 1023.1319 883.83005 832.4043821 1212.0308 99083143 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 667.2897 874.01825 765.9401 642.9070333 862.5009 589.44225 579.87278 723.2303 512.736675 593.90994 938.1367 839.2662333 161761714 sigma_38 Stress Sigma factors Coxiella burnetii RSA 331 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Legionellales;family:Coxiellaceae;genus:Coxiella;species:Coxiella burnetii; 1254.5228 2429.1388 1418.3414 1397.7913 2483.2252 1828.0173 1853.325 1796.0804 1553.5371 2052.0361 1272.6313 1353.634254 39982228 nrfA Nitrogen Dissimilatory N reduction Geobacter sulfurreducens PCA superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter sulfurreducens; 797.2337 1056.6509 1456.2458 734.8037 1082.2672 539.3088 774.5615 2290.8062 811.0688 929.8079 1306.6501 1430.8146 34499217 sigma_70 Stress Sigma factors Chromobacterium violaceum ATCC 12472 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Chromobacterium;species:Chromobacterium violaceum; 884.8794 1081.4352 1123.7423 747.3644 433.8944714 1264.6439 1288.8521 383.6470375 1150.1577 1126.2034 976.1437 875.0252 163745590 mer Metal Resistance Mercury Oceanibulbus indolifex HEL-45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 2611.4804 1955.1795 1607.8345 1537.2824 1805.2132 1874.4716 1319.2941 1147.9934 1670.9118 1426.1678 2730.6364 1660.186 144753 endoglucanase Carbon cycling Carbon degradation Cellulose superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium; 1137.2723 1235.7985 1083.5115 1211.8337 1462.9367 1360.05 882.3014 1005.4293 986.9911 1203.0956 1910.5326 983.0576 269133856 SMR_antibiotics Antibiotic resistance transporter Klebsiella variicola At-22 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella variicola; 540.5724878 1123.8169 1962.7859 954.271 1205.4521 1441.4494 1567.6556 1297.3851 775.3807281 241213923 glnA Stress Nitrogen limitation Asticcacaulis excentricus CB 48 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Asticcacaulis;species:Asticcacaulis excentricus; 2575.8445 1786.6337 2121.3836 2570.3268 812.4161 2164.7133 3171.2885 2800.7713 2201.218 2919.1221 1445.7045 1384.7288 118438836 acc soil_benifit Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 3127.9522 2282.0133 2190.2136 3422.9293 2340.1376 2590.4889 2124.0912 2090.8799 2462.1541 2212.1072 3887.0367 3304.0031 110831199 vanA Carbon cycling Carbon degradation Others Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 2554.3797 3645.5431 2996.399 2316.4569 6564.4548 3865.6769 3568.3878 3008.0207 4854.2399 4870.1353 2157.3613 2693.9297 68537089 katE Stress Oxygen stress Corynebacterium jeikeium K411 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium jeikeium; 3390.5536 3835.6238 4519.5846 3467.6517 2367.1928 3491.5005 3156.0331 4637.4252 3416.2137 3599.3822 4484.7688 4544.9267 86139114 CopA Metal Resistance Copper Roseobacter sp. MED193 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 413.3544669 738.5075 748.5218 488.0009862 701.1956 1171.9361 891.3586 971.2184 955.8927 1005.5924 151362235 nitro Organic Remediation Others Kineococcus radiotolerans SRS30216 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Kineosporiaceae;genus:Kineococcus;species:Kineococcus radiotolerans; 3307.7838 4176.5764 4235.5412 3322.5127 2148.305 4005.0247 3984.4359 5223.7199 4710.7833 4546.2971 2964.5159 4193.5434 33566761 nahA Organic Remediation Aromatics Polycyclic aromatics Bordetella parapertussis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella; 1774.608 841.1106 1329.0108 1696.0001 1043.3053 767.452 879.6976 1593.8664 1128.9217 1017.1072 2049.2026 989.8689 26985956 sox Sulphur Sulphur oxidation bacterium HY-86/2 superkingdom:Bacteria; 5498.12805 3829.45645 5009.1581 6055.5593 3342.12055 5569.7814 6154.3277 3493.9104 4913.6903 4912.45615 5073.82805 6669.367353 262219475 groEL Stress Heat shock Grimontia hollisae CIP 101886 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;species:Grimontia hollisae; 1870.2325 889.3029 1469.8984 1950.2399 970.9368 778.005444 836.4778 644.8707862 1226.9592 1639.2906 850.3988084 1059.5605 219678026 sigma_70 Stress Sigma factors gamma proteobacterium NOR51-B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 821.1613631 669.9048 658.5304306 1546.2099 526.1519 255939460 ABC_multidrug_fungi Fungi function metal resistance Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 1814.878 1971.6811 1446.2717 1696.959 1578.0021 2097.1408 1750.9188 1400.888 1356.9846 1648.5699 2381.7752 2005.9803 77461887 ZntA Metal Resistance Zinc Pseudomonas fluorescens PfO-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 946.8023 87331836 bphA Organic Remediation Aromatics Polycyclic aromatics uncultured bacterium superkingdom:Bacteria; 3805.2758 4001.5319 4251.466733 3611.6949 3400.1399 4566.309233 3746.245167 3471.957233 4073.6874 3798.070533 4322.1223 3657.267733 241772875 sigma_32 Stress Sigma factors Asticcacaulis excentricus CB 48 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Asticcacaulis;species:Asticcacaulis excentricus; 2791.903 2385.284861 3082.2546 2343.34515 3743.0484 3600.3374 1711.482875 1604.920414 1936.629973 3257.5437 4370.2435 2404.196592 83634894 amyA Carbon cycling Carbon degradation Starch Hahella chejuensis KCTC 2396 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Hahellaceae;genus:Hahella;species:Hahella chejuensis; 735.73146 539.4319355 541.9965482 914.1542 882.1158385 775.7556 82523834 sigma_24 Stress Sigma factors uncultured candidate division OP8 bacterium superkingdom:Bacteria; 2770.6128 1902.7184 2887.6727 2643.2388 3499.1971 2503.2339 1920.2996 2534.2594 1919.4302 1947.7526 4843.8646 2588.891 229870768 ahpC Stress Oxygen stress Spirosoma linguale DSM 74 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Spirosoma;species:Spirosoma linguale; 727.4261 671.4052 607.8190901 687.1125 532.6969 576.8303337 740.7599 579.2559839 46371983 acc soil_benifit uncultured soil bacterium superkingdom:Bacteria; 5460.8333 2506.7155 2787.0013 4478.1866 2253.1891 1834.284 2736.5325 2464.6357 2897.836 4077.9985 2523.9047 2443.9049 207742089 phzF soil_benifit Ralstonia solanacearum IPO1609 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 2884.747 2044.2117 2897.0507 1432.8159 2250.3679 1662.8389 2892.3038 2318.4878 1944.7042 879.276379 2411.8948 157321023 iro virulence Iron oxidation Serratia proteamaculans 568 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Serratia;species:Serratia proteamaculans; 574.0191008 1605.1287 811.0587688 790.7444 1180.1553 810.0326 2554.9817 1169.8328 618.1746 54124968 yopD soil_borne_pathogen secretion system type III Aeromonas hydrophila superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas; 2046.7463 2623.1569 2856.1656 1516.9187 3059.8226 2457.0489 2007.1293 2285.2867 2294.3862 2194.7098 3903.5416 2837.4328 159901085 sigma_24 Stress Sigma factors Herpetosiphon aurantiacus ATCC 23779 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Herpetosiphonales;family:Herpetosiphonaceae;genus:Herpetosiphon;species:Herpetosiphon aurantiacus; 1964.2451 364.2341068 904.167 1179.4117 1256.6949 663.5058 966.9975 533.6048 1000.2476 1212.9221 1895.6373 1005.0019 106889690 ara Carbon cycling Carbon degradation Hemicellulose Roseiflexus sp. RS-1 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus; 3699.8323 4371.512 5279.3745 3346.0177 2775.0883 5380.1955 3648.8285 4676.2194 6135.7278 4329.5675 2503.1955 4717.817 88863330 SMR_antibiotics Antibiotic resistance transporter Jannaschia sp. CCS1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Jannaschia; 3571.5941 2286.9064 2678.5513 2981.8279 4049.207 2738.8702 2455.3513 2864.2703 3049.5867 2967.4505 2663.8 3264.4676 162285320 hrcA Stress Heat shock Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 1573.9563 511.2071053 1687.1515 576.0820795 1133.2929 535.6049144 718.7976 764.7678 436.1241949 167352366 dmsA Organic Remediation Others Shewanella halifaxensis HAW-EB4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella halifaxensis; 652.2321 1562.5049 689.4624 1974.9769 1074.4896 934.2386 1148.4292 1339.2782 1342.3189 111225504 nicdehydr Organic Remediation Aromatics Heterocyclic aromatics Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 1025.7842 2071.3661 1243.0824 1552.0391 1359.8348 1754.896 1559.6069 1171.1126 1658.7852 1796.1569 1203.9209 1709.8559 219719739 ArsC Metal Resistance Arsenic Stenotrophomonas sp. SKA14 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas; 8219.4914 2331.0721 4331.9234 7335.2985 3352.2165 2596.9201 3439.7377 3060.759 3078.1965 4181.5339 6947.6991 2886.0636 217501854 sigma_24 Stress Sigma factors Methylocella silvestris BL2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Methylocella;species:Methylocella silvestris; 654.1797 1895.0983 1161.0652 602.5267 1662.5427 1225.8772 1025.9201 1291.3927 1400.0274 1060.433 669.3734384 1226.9991 90413891 nitA Organic Remediation Aromatics Other aromatics Photobacterium profundum 3TCK superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Photobacterium;species:Photobacterium profundum; 1215.8244 665.6711 1168.1459 1053.6705 962.203 1063.2514 922.5841 1071.1752 1121.2188 223585990 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1332.1615 920.0507 1247.3279 774.0471 744.6155013 1123.7856 946.007 1300.7856 1094.371 1028.6757 1044.2078 110286770 obgE Stress Radiation stress Chelativorans sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 3955.5429 3032.091 2874.3836 5139.1059 4320.954 3586.3533 3692.6907 2933.8457 3474.5632 3965.6529 4029.0461 2844.8208 159900839 CopA Metal Resistance Copper Herpetosiphon aurantiacus ATCC 23779 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Herpetosiphonales;family:Herpetosiphonaceae;genus:Herpetosiphon;species:Herpetosiphon aurantiacus; 1333.3167 1750.534 1200.4235 1550.6146 1259.2924 1938.4994 1580.4024 1079.459 2012.2489 2009.7153 1842.634 85069100 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 856.6362647 1186.8161 1145.4207 1171.9191 1279.8843 2749.7806 1093.2177 634.8908 145236879 p450aro Fungi function organic remediation Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 973.452 2016.5476 1813.1175 1367.5472 1079.8024 2024.0644 1472.6855 1856.6381 2042.5944 1891.5854 852.9454161 1941.603 83577223 BchY other category chlorophyllide reductase Rhodospirillum rubrum ATCC 11170 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum rubrum; 2109.7236 2531.91385 2264.72115 2578.37415 2430.9822 2600.36005 2142.36325 1738.45195 2449.6199 2588.0145 2532.3974 2668.33955 260609249 sigma_32 Stress Sigma factors Vibrio coralliilyticus ATCC BAA-450 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio coralliilyticus; 1824.2672 891.673 1630.0653 1523.562 1715.5331 2075.9312 1184.7085 1219.4433 238847888 ahpC Stress Oxygen stress Clavispora lusitaniae ATCC 42720 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Metschnikowiaceae;genus:Clavispora;species:Clavispora lusitaniae; 6042.707 2031.1633 4319.1141 4914.4528 3059.9932 3293.2699 3305.6852 2432.7288 3288.8908 4025.2036 5915.506 4216.2292 66047663 ureC Nitrogen Ammonification Pseudomonas syringae pv. syringae B728a superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae; 501.6723307 1402.8916 1278.5297 970.6614 1969.8777 1520.826 1098.027 1625.5042 1741.084 1727.5706 188481049 amoA Nitrogen Nitrification Archaea superkingdom:Archaea;phylum:Crenarchaeota; 790.8131 449.3297275 643.318 502.7369806 785.7909 767.5803 424.9881 377.7050718 538.72 170744941 fnr Stress Oxygen stress Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 4375.4902 2824.5658 4889.2219 4451.9421 3612.3034 4101.388 2843.7332 5727.1002 3830.6362 3571.8681 4665.3377 4152.9368 170751357 tfdA Organic Remediation Aromatics Chlorinated aromatics Methylobacterium radiotolerans JCM 2831 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium radiotolerans; 2371.593 2511.3283 1543.3373 2463.6368 1779.8833 2109.39 1806.8476 1171.5725 1948.5525 2376.4438 1124.8079 1838.6516 113874815 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 577.9950838 696.0801419 914.8718338 528.710927 509.8804 532.4721 841.1012877 654.2480878 242217844 cellobiase_fungi Fungi function carbon degradation Postia placenta Mad-698-R superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Postia;species:Postia placenta; 517.6434242 578.8896 434.5944169 507.4199 749.7871 481.8658 415.017646 99083205 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 490.3863 564.2658 410.8435837 360.0525984 454.4135682 286.641738 497.8056 342.8880899 369.9894261 163761274 pstA Stress Phosphate limitation Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 3553.7829 4907.3619 3588.1269 2761.5717 5891.9601 3870.2087 3118.8811 3633.4121 4280.3434 3791.9699 2098.429 2823.9476 66474871 cmuA Organic Remediation Chlorinated solvents uncultured bacterium superkingdom:Bacteria; 3871.2687 4868.9176 6126.3867 5129.2711 9089.8587 4207.1739 5636.8025 3948.2806 4527.0213 3648.3359 5305.0649 5234.0297 145218433 CadA Metal Resistance Cadmium Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 3792.7838 2560.1323 3682.9244 2984.403 1458.5671 3306.3161 3666.2873 2382.8132 2921.8355 1683.8606 119226136 gyrB other category gyrB Rhodococcus erythropolis superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 1667.9287 753.4418 1048.9657 1487.5101 830.1986956 749.5792 1298.166 1253.4337 736.1312 847.0422 1853.0706 157316642 oxyR Stress Oxygen stress Shewanella sediminis HAW-EB3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella sediminis; 491.1950784 319.6605375 716.9148 581.9429698 970.5304 955.475 458.7468 524.2425 574.9734 291618530 mgtB soil_borne_pathogen magnesium uptake Pantoea ananatis LMG 20103 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pantoea;species:Pantoea ananatis; 3368.3097 1409.7726 1704.333 2715.9452 1217.0505 2250.8465 3070.2473 2745.6727 1651.2717 2203.442 1637.4449 1416.7252 19548111 nirS Nitrogen Denitrification Thauera aromatica superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Thauera; 2665.72 1249.7134 1622.1413 3064.8897 1630.6717 1662.2717 2159.7062 2346.4495 2713.7479 2062.7782 1397.1028 2089.473 20160382 RdRp_Nepovirus soil_borne_pathogen replication Cycas necrotic stunt virus superkingdom:Viruses;order:Picornavirales;family:Secoviridae;genus:Nepovirus; 935.0491 401.8247385 890.0926 582.8909449 518.2055 768.8379 1060.5279 358.8386045 566.7085 664.0826 68263042 pstC Stress Phosphate limitation Corynebacterium jeikeium K411 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium jeikeium; 955.5925692 763.415 1688.8194 679.505794 1134.7851 662.3343603 833.8282 2357.8034 773.3496 947.0266 1453.8575 89900412 mer Metal Resistance Mercury Rhodoferax ferrireducens T118 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Albidiferax;species:Albidiferax ferrireducens; 2279.5414 2936.9424 4655.0344 2087.763 2829.9761 1799.4658 2953.9048 6524.9655 2451.5187 2847.7908 3796.0315 4434.7246 247546792 cda Carbon cycling Carbon degradation Starch Paenibacillus sp. JDR-2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 1192.505933 2098.901589 2363.8732 1243.73525 4591.317 1687.027011 2363.5207 1668.165587 2860.0469 1305.707543 1610.6815 1490.540732 148628332 bphA Organic Remediation Aromatics Polycyclic aromatics uncultured bacterium superkingdom:Bacteria; 3470.3146 1388.9895 2494.9321 3032.5361 2629.9341 1546.1063 2395.3735 16444.85868 1641.0556 2034.8398 2486.066 2525.3652 110337354 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Acidovorax sp. JS42 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax; 711.8755625 1181.373575 1811.1489 1002.759789 864.0016 779.7418317 253574445 nplT Carbon cycling Carbon degradation Starch Paenibacillus sp. oral taxon 786 str. D14 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus;species:Paenibacillus sp. oral taxon 786; 2189.313673 5145.7624 5053.2709 2857.813056 3792.507205 2853.107894 3681.895345 3092.840283 5050.9672 2429.344306 4124.243225 2717.684459 70992037 endochitinase Carbon cycling Carbon degradation Chitin Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 470.1573 834.3443 446.9064236 492.426 610.9494 453.4296 639.3286 485.6736 154154796 TerC Metal Resistance Tellurium Parvibaculum lavamentivorans DS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Parvibaculum;species:Parvibaculum lavamentivorans; 13222.9325 4704.5132 7480.8416 11235.5592 8678.8222 4542.1498 5000.0099 6819.0751 5904.0537 5495.6017 16193.9041 5339.398 224367365 phoB Stress Phosphate limitation Desulfobacterium autotrophicum HRM2 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfobacterium;species:Desulfobacterium autotrophicum; 1536.5608 997.1049 1351.0962 1406.1742 1797.0417 1748.1807 1094.7529 1727.0739 1323.3075 1610.738 1615.1576 116269615 gyrB other category gyrB Polynucleobacter sp. QLW-P1DMWA-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Polynucleobacter;species:Polynucleobacter necessarius; 1419.4312 1522.557 1756.5298 1330.5228 1590.4017 1781.3836 1670.8681 4573.0063 1316.2716 1431.7287 2390.4721 1509.034 119716813 glnA Stress Nitrogen limitation Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 1275.5786 873.6445073 1166.63014 1092.4818 889.9671 955.5689 1419.8287 81251651 nirS Nitrogen Denitrification uncultured organism 2743.681 4828.1032 3253.7624 4318.2406 5092.19 6424.0397 3832.4783 5176.3316 3780.8254 4840.7452 7590.3332 5219.803 166861074 atzC Organic Remediation Herbicides related compound Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1825.6776 1531.05625 2025.66295 1277.72565 1526.1573 1371.2972 1384.86365 3634.4612 1472.7692 1793.14755 1076.854699 2542.8876 254429014 pstB Stress Phosphate limitation Alcanivorax sp. DG881 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax; 1422.843 1050.0562 1332.6185 871.7657264 1259.3392 1645.3217 999.6302 748.375282 925.4276379 1026.1497 120587259 yopT soil_borne_pathogen enzyme protease Acidovorax citrulli AAC00-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax citrulli; 887.1495 966.9178 1027.5491 1401.8321 1499.9457 1112.5683 983.1132 573.7335835 1160.2807 1481.4529 1279.4303 1332.9991 84704542 AceB Carbon cycling Carbon degradation Others Parvularcula bermudensis HTCC2503 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Parvularculales;family:Parvularculaceae;genus:Parvularcula;species:Parvularcula bermudensis; 3430.555 2046.3142 3294.662 3072.7795 3530.9481 2653.395 2246.1 1937.3493 2357.2671 2400.6825 3266.6494 3588.6197 256374490 clpC Stress Protein stress Actinosynnema mirum DSM 43827 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinosynnemataceae;genus:Actinosynnema;species:Actinosynnema mirum; 8642.0983 4320.3506 6430.4946 9644.8656 7378.3687 6893.6522 5297.559 11012.5882 4940.3954 9435.862 7425.6686 8198.2945 112462695 nirK Nitrogen Denitrification nitrifying uncultured bacterium superkingdom:Bacteria; 3168.4909 5622.0664 5004.2001 3765.9975 4959.7576 4016.1821 4288.3625 5106.7805 6662.9004 4876.0647 4180.233 4376.7467 212543049 mannanase_fungi Fungi function carbon degradation Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 408.6531358 420.4926284 437.0599677 448.1189 470.7498638 500.4616 501.6527 54016528 akbF Organic Remediation Aromatics BTEX and related aromatics Nocardia farcinica IFM 10152 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Nocardia;species:Nocardia farcinica; 4200.004 5431.90285 4335.39105 5446.58105 3705.01858 5914.90525 4618.057 3100.35205 4105.74915 4885.277 5056.53035 4928.6223 114776318 sigma_38 Stress Sigma factors Mariprofundus ferrooxydans PV-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Zetaproteobacteria;order:Mariprofundales;family:Mariprofundaceae;genus:Mariprofundus;species:Mariprofundus ferrooxydans; 57975.4248 27178.30065 68072.6695 43600.9065 54564.0267 56198.0573 24810.59164 75204.2084 58130.8483 47742.9702 85295.5347 68590.719 223512839 mer Metal Resistance Mercury Ricinus communis superkingdom:Eukaryota;kingdom:Viridiplantae;phylum:Streptophyta;order:Malpighiales;family:Euphorbiaceae;genus:Ricinus; 1290.8438 3122.1681 2166.8777 1666.208 1394.2653 2380.2334 2996.7231 1658.1038 2371.4322 3790.4848 997.5975399 2471.2597 198254500 phn Organic Remediation Herbicides related compound Octadecabacter antarcticus 307 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Octadecabacter;species:Octadecabacter antarcticus; 2774.9917 2134.25055 1867.7132 1510.1453 3942.1614 2081.5264 1280.6012 1519.009567 1942.6174 1908.2513 4349.6545 2347.426 108798992 chnB Organic Remediation Other Hydrocarbons Mycobacterium sp. MCS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 2854.699 2891.1711 2816.4728 2592.6949 4652.8596 2663.341 3113.2607 2620.7445 2452.6835 2019.4747 3303.9115 2620.7226 146279402 hydrogenase Energy process Energy process Rhodobacter sphaeroides ATCC 17025 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 1116.9895 728.6448 462.8934608 567.1166389 808.3425 629.3485 1079.4953 745.3805 757.2528 791.3952 83632559 endochitinase Carbon cycling Carbon degradation Chitin Hahella chejuensis KCTC 2396 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Hahellaceae;genus:Hahella;species:Hahella chejuensis; 1016.9727 2424.6152 2533.6217 1035.889 990.0859 2198.6341 2337.2424 2425.4783 2858.3578 2742.5023 2645.0426 213966090 ZitB Metal Resistance Zinc Corynebacterium amycolatum SK46 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium amycolatum; 2732.39795 2523.637499 2665.51665 2782.76175 3312.973988 2438.9144 2057.23695 2499.885009 2437.4875 2631.8652 2956.22745 2827.5524 166031695 sigma_70 Stress Sigma factors Dorea formicigenerans ATCC 27755 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Dorea;species:Dorea formicigenerans; 989.2887 1057.8232 1305.7476 785.2928 1495.6609 1049.3182 851.2285 903.3903 958.6725 871.9545 1730.9487 1456.6589 90304595 endochitinase Carbon cycling Carbon degradation Chitin Coccidioides immitis RS superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Coccidioides;species:Coccidioides immitis; 743.978938 879.5294 459.4201634 1018.8219 640.2623995 913.1861 1360.2199 894.8326 446.642204 1019.24 717.4603 18892543 ArsC Metal Resistance Arsenic Pyrococcus furiosus DSM 3638 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Pyrococcus;species:Pyrococcus furiosus; 1049.8146 580.7929 862.0461 1064.4621 545.9009556 529.1983 779.0923 556.8328 750.1915 852.1676 978.5461 726.8807 288914907 mgtB soil_borne_pathogen magnesium uptake Azospirillum sp. B510 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Azospirillum; 8648.1697 7574.8247 10818.5986 9147.577 10537.8805 8258.3088 7296.5444 4630.2232 7817.2168 7202.5275 10950.4863 8090.0012 116091781 gyrB other category gyrB Oenococcus oeni PSU-1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Leuconostocaceae;genus:Oenococcus;species:Oenococcus oeni; 1255.1945 1033.88 1323.3258 912.6661 1766.5737 1461.9622 968.6148 963.4154 880.4849 1006.8118 1096.314626 1237.985 238600830 phenol_oxidase Carbon cycling Carbon degradation Lignin Moniliophthora perniciosa FA553 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Marasmiaceae;genus:Moniliophthora;species:Moniliophthora perniciosa; 902.0862 2422.742 1798.1418 1408.6672 918.0586 2346.2976 2125.135 2045.0653 2514.7607 2294.2141 884.9463 2807.761497 160917476 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 5270.9879 7299.02485 7006.49085 4914.7062 9188.4166 6076.4182 5764.94785 7378.819 6432.4844 7572.5222 5934.46145 6284.44455 92431362 pcaG Organic Remediation Aromatics Other aromatics Mycobacterium sp. JLS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 1269.3252 2897.7463 2277.3196 2759.4212 969.5527 2872.1008 4334.3926 2586.7194 2682.1909 2699.143 1580.1702 1373.8528 107015899 nitA Organic Remediation Aromatics Other aromatics Gibberella moniliformis superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella; 6209.7779 13493.474 12959.407 8154.9721 8495.0854 13700.6626 12835.5518 11899.7951 15198.9497 15370.696 5509.7305 13903.1927 56477215 pchCF Organic Remediation Aromatics BTEX and related aromatics Azoarcus sp. EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 770.987 670.7809 793.4488 965.6207 1329.9545 982.0747 590.992 738.0459 794.8885 770.7977 883.2165 1322.5168 269788603 sigma_24 Stress Sigma factors Sphaerobacter thermophilus DSM 20745 superkingdom:Bacteria;phylum:Chloroflexi;class:Thermomicrobia;order:Sphaerobacterales;family:Sphaerobacteraceae;genus:Sphaerobacter;species:Sphaerobacter thermophilus; 5113.8905 2527.1545 3351.8458 4402.3023 3219.0637 3776.7618 3256.4664 3435.3983 3370.5848 3349.544 2841.6301 3672.4557 126320278 silC Metal Resistance Silver Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 2975.6165 2636.2053 2708.4299 2794.1992 3303.9266 2822.6853 1861.985 2448.4644 1825.1088 1752.4626 4129.493 3060.0891 37548680 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 591.6020793 1101.5047 867.9491 496.2339 1328.8359 595.6342 869.0991 1104.9627 890.3049 1123.5012 778.6791 116179054 tre_fun soil_benifit Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 855.7094309 670.7570371 642.5773224 518.5588768 611.8985656 6592.09622 679.8916 804.6168001 146313536 TerC Metal Resistance Tellurium Enterobacter sp. 638 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter; 1515.2706 1005.8463 1172.595 1683.7682 1821.9355 1154.7451 1262.9294 1526.0946 1409.3 1290.2274 2187.1038 1444.2311 256357124 glnA Stress Nitrogen limitation Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 4739.2503 8156.1146 4717.2489 4960.0792 10646.1395 3849.7485 6640.8718 3941.4053 4987.9581 3846.786 6507.4963 3927.7126 217503584 BchY other category chlorophyllide reductase Methylocella silvestris BL2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Methylocella;species:Methylocella silvestris; 2857.8421 3221.1778 2882.9619 3191.8931 2512.4797 3450.6549 5107.5547 2206.5847 3774.8029 2657.2912 3105.4683 2804.434 190010018 gyrB other category gyrB Stenotrophomonas maltophilia K279a superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 970.1745 1056.2219 616.810608 1167.1524 886.0549 1199.7785 1199.2352 701.261 1318.1121 1246.7453 917.8015 24986362 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas putida KT2440 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1703.4705 2417.9126 3288.8171 1708.6566 1147.0329 1871.9589 2323.5699 2956.1902 1911.4856 2458.8522 2201.8549 2904.378 91202321 czcC Metal Resistance "Cadmium,Cobalt,Zinc" Candidatus Kuenenia stuttgartiensis superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;genus:Candidatus Kuenenia; 916.7677 1133.5905 1069.9026 844.3291 1389.4496 1092.0334 714.5034 960.4377 1120.6626 968.8905 977.0084567 1250.5775 167758186 Al Metal Resistance Aluminum Clostridium scindens ATCC 35704 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium scindens; 2415.6778 913.6285 1138.4563 2296.2668 1410.8738 995.8943 1108.781 1403.672 923.4112 1234.0937 3075.5336 1069.1045 119378090 pimF Organic Remediation Aromatics Aromatic carboxylic acid Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 797.8516 1184.5734 1086.245 733.3780785 710.6779918 1184.2538 937.9893 808.6743 1072.2729 1064.7545 889.0597 82741452 FTHFS Carbon cycling Acetogenesis Shewanella sp. W3-18-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella; 2513.8544 1150.3214 1378.634 1828.7155 2100.1667 1423.8536 1469.2903 922.515 1185.2909 1546.4639 2970.7864 2043.5383 260838785 phoB Stress Phosphate limitation Vibrio sp. RC341 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 1129.4279 2252.5397 2266.6622 1234.7497 997.1750341 2093.4167 2197.4968 2067.0224 2384.5722 2048.6192 2187.3709 145254097 hdnO Organic Remediation Aromatics Heterocyclic aromatics Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 1098.2381 749.23675 1131.2665 1055.4285 1267.9095 937.1685 734.886 902.773 826.85895 899.6585 1589.3717 924.95605 110634870 proV Stress Osmotic stress Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 5984.7198 10085.2355 6694.8806 8732.9392 4741.4386 9080.2316 9442.5667 6689.7772 10271.1817 10275.4897 4078.8011 9319.115 118705681 vanA Carbon cycling Carbon degradation Others Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 1517.2317 5442.6512 3587.7635 2816.2933 2248.1649 4649.2668 3842.7557 3329.728 5536.3201 4593.9443 1570.2241 4409.6219 56809449 nifH Nitrogen Nitrogen fixation uncultured archaeon superkingdom:Archaea; 628.0808 371.6248073 412.6174067 376.1334685 585.7159108 476.4290628 397.4778 297.5004539 399.2777681 650.2018067 418.4095247 219996664 dsrA Sulphur sulfite reductase Thioalkalivibrio sp. HL-EbGR7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Thioalkalivibrio;species:Thioalkalivibrio sulfidophilus; 497.0622 1133.3866 735.538 672.65805 975.2975 1089.9395 964.4397 492.3171 1039.0269 1006.1976 994.2495 226319232 grpE Stress Heat shock Deinococcus deserti VCD115 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus deserti; 7126.6262 3169.4175 5397.1588 5860.4175 5047.7109 3849.0605 3758.5413 5561.1628 3449.1569 4581.1476 7848.6698 5193.588 88810991 sigma_70 Stress Sigma factors Nitrococcus mobilis Nb-231 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Nitrococcus;species:Nitrococcus mobilis; 596.7198141 1129.8187 940.5448 824.7143 1020.0637 1180.3782 857.3819 1080.6019 1299.9087 1099.6727 229876369 glnA Stress Nitrogen limitation Sphaerobacter thermophilus DSM 20745 superkingdom:Bacteria;phylum:Chloroflexi;class:Thermomicrobia;order:Sphaerobacterales;family:Sphaerobacteraceae;genus:Sphaerobacter;species:Sphaerobacter thermophilus; 2104.1962 2304.4656 3296.0868 2293.8834 2551.0434 2165.3265 2086.9276 3245.7486 2332.3733 2657.883 1869.907 3102.0689 110286002 ureC Nitrogen Ammonification Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 1785.9314 1956.0587 2256.91345 1968.259 1902.9591 2216.97055 1491.7088 2045.07935 1601.73455 1824.1121 2534.6437 2444.84555 256363043 sigma_24 Stress Sigma factors Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 5378.5336 3847.7006 3308.790602 4733.0291 4836.360534 3324.033083 3330.415 2730.2458 3484.681694 3308.020859 5720.162 6394.5642 50951986 aclB Carbon cycling Carbon fixation Leifsonia xyli subsp. xyli str. CTCB07 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Leifsonia;species:Leifsonia xyli; 5253.1566 3076.5625 5996.0839 4592.5472 3914.9735 4292.1106 3856.5199 7349.2059 4625.4898 4330.7065 4269.9889 5259.2423 114307129 merP Metal Resistance Mercury Nitrosomonas eutropha C91 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas;species:Nitrosomonas eutropha; 855.1135 1040.213 1059.7976 1286.51825 891.30505 711.48675 1320.03145 886.74035 833.51405 993.8169 118730589 vanA Carbon cycling Carbon degradation Others Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 2394.1055 3030.9187 2434.6223 2844.428 2078.2116 3460.7205 5381.9532 1780.7443 3112.0483 2433.9287 3046.1515 1643.5012 114705967 katE Stress Oxygen stress Fulvimarina pelagi HTCC2506 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Fulvimarina;species:Fulvimarina pelagi; 8635.3284 6529.0177 8177.5737 10524.2056 9851.8297 11202.0801 9334.1501 12757.2415 7608.6309 8404.7521 8544.4944 8234.081 32399641 phenol_oxidase Carbon cycling Carbon degradation Lignin Pleurotus sajor-caju superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Lentinaceae;genus:Lentinus; 2739.8663 1632.2066 2627.634 2994.4296 821.1754 2312.7955 3545.975 1424.8302 2828.2453 3659.346 2570.2482 1335.2924 42552315 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 417.04837 771.6254 807.6103 671.7617 564.2778 997.6341 693.1816 521.5849 700.2674 44903457 tfdB Organic Remediation Aromatics Chlorinated aromatics Sphingobium herbicidovorans superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingobium; 832.2517 583.7622496 1054.0382 535.8688 712.1291 1836.1455 534.7677 507.4146 692.7421 168701405 sigma_24 Stress Sigma factors Gemmata obscuriglobus UQM 2246 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Gemmata;species:Gemmata obscuriglobus; 3510.62495 4390.146157 3515.25924 2861.2897 4983.713787 3433.796476 3099.515955 3296.628941 2856.928185 3442.956205 4071.05315 2379.3285 151562278 rubisco Carbon cycling Carbon fixation Ochrobactrum anthropi ATCC 49188 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum;species:Ochrobactrum anthropi; 1190.8 2171.4461 1205.0907 1105.6094 2474.7123 2089.1392 1291.8 1469.6281 2205.3067 1730.621 1082.4661 119451573 gyrB other category gyrB marine gamma proteobacterium HTCC2143 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 943.8204 33299.35306 749.8013 862.9852 456.3130029 649.2034 628.1689 787.1007 739.5733231 775.0126 149358954 AceB Carbon cycling Carbon degradation Others Marinobacter algicola DG893 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter algicola; 1072.816903 1138.2925 1515.3633 686.2997562 696.6290005 754.6033 2466.4876 861.6951 1000.9605 1792.0432 1422.5477 119353654 fccAB Sulphur sulfide oxidation Chlorobium phaeobacteroides DSM 266 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium phaeobacteroides; 2777.5439 3314.7464 939.5125 2497.4149 4796.535 1665.8463 4374.4237 1495.7976 1830.8051 1996.5277 1976.5041 1436.3487 290571829 sod_nickel soil_benifit Stackebrandtia nassauensis DSM 44728 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Glycomycetaceae;genus:Stackebrandtia;species:Stackebrandtia nassauensis; 7683.1263 5122.4308 6135.4884 8087.4159 4670.3403 6391.2705 4663.4619 4769.4586 6426.3571 7010.297 5561.5035 7025.5244 225194046 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1055.3219 2926.5062 2067.5585 1594.3919 1701.1443 2634.7146 2450.2012 2487.0528 2557.6521 2556.9383 1223.9815 2534.1676 49612434 nitro Organic Remediation Others Erwinia carotovora subsp. atroseptica SCRI1043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium atrosepticum; 2325.3321 1697.7034 1657.4868 2033.463003 1764.8484 1232.0541 1645.7139 3288.6703 1296.8411 1757.0632 2614.2372 1610.5573 156869289 tutFDG Organic Remediation Aromatics BTEX and related aromatics Clostridium leptum DSM 753 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium leptum; 3540.176 3362.7476 3347.9783 4298.7764 2551.1699 3410.9609 2568.8378 2974.044 2700.5846 2686.4356 2711.3927 3323.2101 238576701 phenol_oxidase Carbon cycling Carbon degradation Lignin Moniliophthora perniciosa FA553 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Marasmiaceae;genus:Moniliophthora;species:Moniliophthora perniciosa; 508.3482209 681.4973 1155.8302 725.1019 783.6705 864.9978 904.1897255 45126707 gyrB other category gyrB Halomonas sp. TNB I20 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Halomonadaceae;genus:Halomonas; 535.6934 1021.0524 554.9323 1095.5578 556.9830397 595.9127 831.3744477 674.9225 701.5857 198254947 ChrA Metal Resistance Chromium Octadecabacter antarcticus 307 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Octadecabacter;species:Octadecabacter antarcticus; 5739.19755 6630.1235 6865.64685 4715.441197 4812.073411 8263.0717 7731.6847 6874.36135 5343.9612 6871.34735 4597.335672 6932.6732 113476588 xylF Organic Remediation Aromatics BTEX and related aromatics Trichodesmium erythraeum IMS101 superkingdom:Bacteria;phylum:Cyanobacteria;order:Oscillatoriales;genus:Trichodesmium;species:Trichodesmium erythraeum; 526.1699 445.5318119 858.9783 553.1055665 878.0537 626.0909 633.3803 840.1096 601.0565 576.2540842 582.7322 116198565 lactase_fungi Fungi function carbon degradation Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 1051.9504 538.7042368 713.2164 630.9722433 556.0108881 508.5325 727.3699 397.0877745 523.1147 1056.722083 592.5234 78221757 cytochrome Energy process Energy process Geobacter metallireducens GS-15 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter metallireducens; 2597.7391 2842.4691 1773.9336 1807.5528 2939.1072 2474.5029 1367.0447 1941.368 2237.1316 1717.7238 1328.2339 211960597 ArsC Metal Resistance Arsenic Pseudovibrio sp. JE062 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pseudovibrio; 717.2712 400.0022941 317.5723688 561.3263 734.2662144 120588557 sigma_70 Stress Sigma factors Acidovorax citrulli AAC00-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax citrulli; 3835.8074 1662.7251 1619.248 3021.1809 1355.7127 4213.3014 1755.1437 1558.6626 2052.5163 1617.6006 2165.5502 146340767 linB Organic Remediation Pesticides related compound Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2266.2569 5530.0269 4577.8831 2173.4548 5199.7854 3385.2959 3627.9757 4721.0052 3271.5572 3407.2076 2306.6743 2735.6761 99083061 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 1130.23872 1143.635073 1302.25025 1109.96935 1627.491275 1229.134927 953.6028556 1201.687522 1031.285 1058.6788 1877.10472 1518.520044 124267838 mauAB Organic Remediation Herbicides related compound Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 26617.297 19978.4408 18734.4325 23346.9654 23391.6304 20981.4883 15039.4719 15360.7334 22563.384 17489.6526 29226.763 17225.7664 145241462 nagG Organic Remediation Aromatics Aromatic carboxylic acid Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 3255.3575 1216.8121 1722.4056 2731.7248 1186.6205 1642.7538 3134.2512 4203.3055 1296.2237 1864.3951 1324.14 1666.393 76803737 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 803.9499 1974.6756 2164.7695 959.0733 2509.8823 1730.9959 1189.6805 1483.7659 1463.9451 1846.4394 1017.3459 1314.8312 209901818 amoA Nitrogen Nitrification Archaea superkingdom:Archaea;phylum:Crenarchaeota; 545.6736 486.5073134 508.1226201 578.6156 727.1642 544.7552 170690598 vanA Carbon cycling Carbon degradation Others Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 1596.4017 792.4997133 1121.5178 1700.6025 1993.9744 1140.7011 939.2281 885.5365 1066.6116 1225.194 1864.6215 1279.8686 82737569 rubisco Carbon cycling Carbon fixation Pseudomonas putida F1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 483.9281637 482.3451457 512.0823519 870.6504 1086.8155 745.5869 731.5299 1000.3687 585.2432677 3925395 napA Nitrogen Dissimilatory N reduction Pseudomonas sp. G-179 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae; 1943.1564 895.687 1376.424 2028.576 1193.8251 1221.2856 1266.6228 1195.9021 1148.1075 991.938 1534.7157 1419.7601 27125547 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 1241.9636 917.6041 1032.5361 1171.835192 678.2193235 754.0512 866.5642 1522.1365 944.2278 1067.6912 25054.03661 253700771 nrfA Nitrogen Dissimilatory N reduction Geobacter sp. M21 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 1824.67685 2203.0795 1910.8301 2039.4176 2282.9556 2394.9504 1835.1733 1705.1531 1945.25585 1945.21785 2315.45525 2088.3881 2052219 cat_bac soil_benifit Streptomyces coelicolor superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 3207.4714 4396.6785 3609.7908 2872.7819 6010.1159 3474.9888 3461.967 4720.5089 3907.9852 3518.4031 4390.4482 4113.6349 24348466 glucoamylase Carbon cycling Carbon degradation Starch Shewanella oneidensis MR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella oneidensis; 875.4634 938.7568 618.7278 824.2349 1239.5323 1562.6235 1038.3287 949.6912 964.9934 922.9051 440.0104365 3702218 toxin virulence toxin Actinobacillus sp. superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Actinobacillus; 882.4801537 591.7784829 911.0772 1075.5747 956.5886 771.7466556 1322.0019 1159.9577 40252999 B_lactamase_A Antibiotic resistance Beta-lactamases Streptomyces albulus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 4108.994788 2768.8362 4299.129082 5289.359779 2379.929471 3342.4387 3918.521025 4608.781698 3343.852292 4411.154164 2935.7585 3448.7077 119896295 gyrB other category gyrB Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 3093.364 1647.97555 2498.7851 2820.745 2827.0184 1874.9277 1471.26315 1942.0095 1630.9909 1790.59225 3894.9408 2103.74775 196193904 phzF soil_benifit Alcanivorax sp. DG881 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax; 2000.8884 1440.0234 1010.3489 1759.6388 1838.0891 911.167 1331.487 1019.2524 1493.4169 1074.045 1634.3457 1399.752 87308539 cat_bac soil_benifit Blastopirellula marina DSM 3645 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Blastopirellula;species:Blastopirellula marina; 3653.612637 3737.706589 4500.6323 3925.683233 3362.644724 5658.243846 3341.258233 3792.979483 4671.223467 5203.899323 3391.14485 6624.43 29293450 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 10287.4875 8691.149 2775.4279 8317.9042 5966.9261 4608.7951 6015.1938 4494.2196 6822.0598 5436.0845 13294.9273 4826.4536 118028954 Arylest Organic Remediation Aromatics Other aromatics Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 628.7022983 1790.1379 1932.7338 1171.3712 1416.2204 1034.4367 987.8963 1764.4398 1391.081 1501.4408 1938.4732 1783.5986 46115498 exochitinase Carbon cycling Carbon degradation Chitin Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 4582.6834 2997.4695 4668.0909 4928.4379 1161.7266 2511.0112 2132.7168 2922.4919 2799.3792 3414.4211 2740.6547 3057.837 209539245 CopA Metal Resistance Copper Rhizobium leguminosarum bv. trifolii WSM2304 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1739.2273 1093.5147 1337.6044 762.059 986.6786 1409.7878 1003.354 83318552 p450aro Fungi function organic remediation Pleurotus sapidus superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Pleurotaceae;genus:Pleurotus; 774.5466 920.1781 961.627 718.4489 1330.2389 893.4288 712.7944 985.0215 684.0721 868.4371 1640.3519 1179.4851 108768650 narI Stress Oxygen limitation Mycobacterium sp. MCS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 1893.4301 2049.5763 1537.347 1854.3572 1671.5864 2293.7711 2051.8861 1203.2736 1846.9738 2426.6928 1306.313665 1896.8905 151357412 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2606.3358 2465.7736 2148.5143 3076.9435 2314.0682 2315.353 2111.646 1759.1866 1846.601 2004.9249 1949.9089 2103.6585 212003201 sidA Fungi function iron Schizosaccharomyces japonicus yFS275 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Schizosaccharomycetes;order:Schizosaccharomycetales;family:Schizosaccharomycetaceae;genus:Schizosaccharomyces;species:Schizosaccharomyces japonicus; 360.6726933 851.6232 479.4682 795.3525 528.0766 809.4654 580.8564 577.7748 71383850 nasA Nitrogen Assimilatory N reduction uncultured bacterium superkingdom:Bacteria; 4089.248 2247.1878 2861.7342 4428.6837 2467.0148 2601.7659 2264.4638 2020.2152 2480.5595 3235.0209 3265.8806 3784.5254 70986729 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 1490.6895 2634.9183 1652.776 1497.1121 26528.06006 2095.4806 2023.3367 1305.9905 2249.7824 2215.8479 1238.0118 2378.8959 261876697 mannanase Carbon cycling Carbon degradation Hemicellulose Selenomonas noxia ATCC 43541 superkingdom:Bacteria;phylum:Firmicutes;class:Negativicutes;order:Selenomonadales;family:Veillonellaceae;genus:Selenomonas;species:Selenomonas noxia; 1422.5877 2617.5927 2014.7365 2254.4071 2387.0814 2528.1212 1730.3068 1128.1908 2002.8016 2632.5798 2754.589 2852.1676 222056241 cytochrome Energy process Energy process Geobacter sp. FRC-32 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 1454.3887 763.7633 1123.34975 1378.87505 932.5058 10794.59185 883.09855 1124.3659 720.4984 856.47785 1588.0263 1037.84975 54016322 ohbAB Organic Remediation Aromatics Aromatic carboxylic acid Nocardia farcinica IFM 10152 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Nocardia;species:Nocardia farcinica; 2286.3583 2332.3591 2737.03635 2686.8174 1276.0526 2752.9964 2832.39495 3056.35905 2556.8192 3013.7298 2071.4253 2728.5696 149124146 endoglucanase Carbon cycling Carbon degradation Cellulose Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 1438.0886 1281.9265 1552.9043 910.269 555.9494919 1248.3116 1086.6779 1611.3692 1395.7057 997.5101 956.924 1162.2099 32034495 sigma_70 Stress Sigma factors Actinobacillus pleuropneumoniae serovar 1 str. 4074 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Actinobacillus;species:Actinobacillus pleuropneumoniae; 1311.2743 1075.1658 1329.5778 1281.65 769.1315 1097.7766 872.1388 879.1212 955.3992 1163.7785 1416.2263 1285.5675 77545820 pilin virulence pilin Pelobacter carbinolicus DSM 2380 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter carbinolicus; 3795.0941 2671.99915 3871.96675 2706.19945 2891.46185 2948.07875 2436.14445 3504.72955 2789.3553 3225.1107 3688.989525 3392.8788 119718714 TerZ Metal Resistance Tellurium Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 1283.2142 337.2198224 678.5018465 823.4267 608.5621113 473.4119428 753.031 444.0910944 1217.254469 824.7649 67156658 ureC Nitrogen Ammonification Azotobacter vinelandii AvOP superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Azotobacter;species:Azotobacter vinelandii; 4775.2354 3357.7398 3825.8912 4296.804 3642.6766 3762.673 3528.7352 3708.386 3273.4909 3696.8988 4742.2165 4456.7788 302663456 phospholipase_D_fungi Fungi function carbon degradation Trichophyton verrucosum HKI 0517 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Trichophyton;species:Trichophyton verrucosum; 930.4552 478.2675179 681.3639 898.2563 730.2265 732.6188 543.2759 422.8408885 472.4328732 766.5321 1330.7468 852.463 89358821 xylXY Organic Remediation Aromatics Aromatic carboxylic acid Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 723.6516 842.399684 833.2067 949.3354 720.5826 610.4104 951.6832 1004.9581 727.9768199 196184067 glnA Stress Nitrogen limitation Brevundimonas sp. BAL3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Brevundimonas; 9013.4297 9996.5219 4284.9997 6767.9197 7241.5757 5544.2959 5123.613 5342.0875 4528.524 5048.1397 12220.8353 3197.4538 299746626 phospholipase_C_fungi Fungi function carbon degradation Coprinopsis cinerea okayama7#130 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis;species:Coprinopsis cinerea; 2435.974 2422.0412 2059.5763 2057.4367 3359.0799 1703.3866 1599.7297 1544.9893 1718.3579 1753.0991 3501.7301 2457.6784 163802442 ppx Phosphorus Phosphorus utilization Vibrio campbellii AND4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 2800.2377 3536.57515 3560.1312 3773.79825 5681.98325 2236.33145 3812.0269 2247.59395 2932.5382 2741.98865 2620.6518 2164.7606 20501975 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 570.8087633 889.1748 1026.9432 819.3987 558.588 430.6451973 853.7401 160363930 nagG Organic Remediation Aromatics Aromatic carboxylic acid Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 4301.5589 2083.4205 2865.5291 3934.6825 3452.8537 2277.4089 2576.2361 2430.6105 1882.9341 2873.6188 4657.5057 3293.6077 148645206 nrfA Nitrogen Dissimilatory N reduction uncultured Geobacter sp. superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 1118.8388 471.551 641.8747 848.4795 666.6173 654.0534 390.9866716 465.3488 773.2214 887.2861 1411.301172 998.685 114571248 narJ Stress Oxygen limitation Maricaulis maris MCS10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Maricaulis;species:Maricaulis maris; 1654.671 4238.811 3486.0161 1643.9906 4282.4472 2874.7032 2625.7989 2795.9659 3201.2442 2649.2402 1256.102249 2086.7677 6505657 pheA Organic Remediation Aromatics Other aromatics Comamonas testosteroni superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas; 3152.6273 1272.7774 2203.5463 2824.1831 1214.3393 2028.641 2208.535 2403.969 1691.5187 2577.8419 1898.1599 1908.563 160898214 CopA Metal Resistance Copper Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 4696.4684 4243.564 5075.9525 5383.2095 5693.7192 3576.6168 3381.1364 3711.6662 4312.4479 4100.03 4378.7483 2834.0134 59893226 nosZ Nitrogen Denitrification uncultured forest soil bacterium superkingdom:Bacteria; 689.8291 1000.8895 715.0519 743.8852 1699.7224 845.5388 941.1436 1202.4505 905.9028 1255.5556 707.2547754 157917860 endochitinase Carbon cycling Carbon degradation Chitin Salinispora arenicola CNS-205 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora arenicola; 3214.4831 2160.6786 1593.7312 3136.4592 2014.1782 2108.2508 1548.5238 2377.4431 1827.9701 1387.8052 1461.1905 115469636 CadA Metal Resistance Cadmium Oryza sativa (japonica cultivar-group) superkingdom:Eukaryota;kingdom:Viridiplantae;phylum:Streptophyta;class:Liliopsida;order:Poales;family:Poaceae;genus:Oryza;species:Oryza sativa; 1976.52225 1047.7439 1844.8281 2251.6197 1648.13345 1493.65455 1370.1416 1858.78655 1529.5112 2373.44 2866.00305 1642.8764 227503216 glnA Stress Nitrogen limitation Corynebacterium accolens ATCC 49725 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium accolens; 8994.4946 7722.409 9081.3482 6138.1485 5056.8873 8932.6878 6589.7261 8371.5691 7686.3759 7986.7137 4715.2128 8868.3507 73660924 rd Organic Remediation Chlorinated solvents Dehalococcoides sp. CBDB1 superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides; 815.1121 391.3375894 404.7660589 489.4118292 679.7740027 433.7696 447.4226804 1283.6105 13816135 acpA_III Bioleaching other category Sulfolobus solfataricus P2 606.9518 648.0864 489.3296441 613.1181 567.2486 352.8657024 627.2486 711.5932 566.8851 154320900 nitA Organic Remediation Aromatics Other aromatics Botryotinia fuckeliana B05.10 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Botryotinia;species:Botryotinia fuckeliana; 1420.678111 1350.324333 1268.661491 1385.659867 1774.1891 1208.4681 1433.839633 1545.9617 1480.42835 1595.4958 1164.4966 1123.6311 121609909 phn Organic Remediation Herbicides related compound Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 12247.2732 3969.8157 7711.9467 8445.0583 6741.1577 5676.0459 6011.9019 3672.4726 6919.1886 8482.0463 10238.1809 6763.7996 6978931 ara Carbon cycling Carbon degradation Hemicellulose Streptomyces chartreusis superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 2587.7052 786.3558 1028.9012 1585.8446 969.1925 948.6026 987.1278 638.222 1048.9518 1509.8156 1762.517 867.0742 67903572 nitA Organic Remediation Aromatics Other aromatics Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 932.4754523 896.33045 1803.7977 697.9026 1444.0151 880.28225 1110.1919 1015.5364 816.04295 754.7068 1049.9754 83838572 phn Organic Remediation Herbicides related compound Roseovarius nubinhibens ISM superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius;species:Roseovarius nubinhibens; 2750.6524 4214.9187 2505.6913 2403.217 4981.4853 3222.2724 5844.7348 2046.1062 3921.9522 2452.9675 3463.1706 2361.909 218564148 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 1978.6446 1864.0065 3167.3979 985.5369 1014.9419 2111.1099 1303.5111 2679.196 2312.3838 1923.8899 2066.9656 42524684 sigma_32 Stress Sigma factors Bdellovibrio bacteriovorus HD100 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Bdellovibrionales;family:Bdellovibrionaceae;genus:Bdellovibrio;species:Bdellovibrio bacteriovorus; 847.081 2184.5072 976.7917 1122.6902 1971.7665 1419.591 2787.7471 791.6678 1969.6371 1566.0387 1836.2245 791.6012 198260615 B_lactamase_C Antibiotic resistance Beta-lactamases Verrucomicrobiae bacterium DG1235 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales; 1215.8244 863.6394 839.728 891.6815 1281.1906 828.4587 699.7412 651.2255644 531.2714777 620.1064 966.1256 226227773 pstA Stress Phosphate limitation Gemmatimonas aurantiaca T-27 superkingdom:Bacteria;phylum:Gemmatimonadetes;class:Gemmatimonadetes;order:Gemmatimonadales;family:Gemmatimonadaceae;genus:Gemmatimonas;species:Gemmatimonas aurantiaca; 1928.0317 4249.4383 2102.5695 1433.7884 4628.1743 3059.5929 4294.1321 1526.4577 3046.6279 2127.4431 2992.9851 1687.4722 158441277 clpC Stress Protein stress Clostridium bolteae ATCC BAA-613 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium bolteae; 1526.5403 1473.2942 1459.9097 1735.9558 1120.317003 1747.3282 1116.8675 1267.0752 1402.3223 1351.6764 2604.0988 1294.5897 77543332 arhA Organic Remediation Aromatics Heterocyclic aromatics Sphingomonas sp. MWW superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 8525.3985 15443.0723 14023.7555 12275.3109 9609.8681 17491.1693 13953.2566 12632.5635 20743.5755 16186.5168 11724.2227 16269.9218 110668545 grpE Stress Heat shock Haloquadratum walsbyi DSM 16790 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloquadratum;species:Haloquadratum walsbyi; 1811.6408 2100.623 1994.1341 1860.9457 1940.4516 2089.0195 1857.569 1355.9569 1681.6405 1665.0181 3196.8098 2176.797 222081274 fnr Stress Oxygen stress Agrobacterium radiobacter K84 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 1179.268473 1016.259541 1037.709229 1884.483 1085.624121 869.7437544 1486.8283 1037.664 1150.5016 1223.259774 177843199 sigma_24 Stress Sigma factors Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 393.0984459 1026.6932 614.0461 384.8587787 682.1451 799.3388 669.3681 448.7659 633.0731 815.966 785.2432 239909968 ahpF Stress Oxygen stress Thermococcus gammatolerans EJ3 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Thermococcus;species:Thermococcus gammatolerans; 1238.3772 1635.4178 1094.8233 1434.5829 1458.2916 1421.0717 1386.5211 1100.4962 1418.3046 1670.6684 1744.7635 158138730 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 741.7986 518.6105483 579.9258 646.0272 533.7556 364.873207 420.7518 731.2064 77378519 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1700.5423 395.5808708 547.6896682 1209.0394 1019.5869 649.3871 594.1004 838.6808 606.5135 688.9476 1423.722 71558041 pcaG Organic Remediation Aromatics Other aromatics Pseudomonas syringae pv. phaseolicola 1448A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas savastanoi; 2489.896571 1421.7761 2557.9608 1417.6527 2647.6991 879.4532021 2194.7936 1108.152273 1341.0954 1068.9642 1278.637325 1573.1504 219951850 nagG Organic Remediation Aromatics Aromatic carboxylic acid Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 1846.6051 1595.1471 1732.5251 1792.7321 2739.3116 1718.3429 1455.0901 1518.2268 1735.6216 1804.7216 1400.5383 1565.1719 307328539 cat_bac soil_benifit Streptomyces violaceusniger Tu 4113 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces violaceusniger; 1950.4905 1430.0715 760.1388 1503.0568 1916.6574 1053.4611 2819.951366 908.7646 1069.3258 1245.4611 1377.6188 1477.1613 17826941 pheA Organic Remediation Aromatics Other aromatics Burkholderia kururiensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia kururiensis; 568.025 733.0155 982.4767 716.9011 568.1892 477.2089231 596.0874 968.419 46197654 pstC Stress Phosphate limitation Thermus thermophilus HB27 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Thermus;species:Thermus thermophilus; 534.0040566 646.4171 552.1951 810.4825 726.4536 817.4359 1042.6437 531.8671 584.921 991.4344 68344601 alkB Organic Remediation Other Hydrocarbons Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 1610.022 1630.0277 1809.439 1398.983 1668.2306 1673.8629 1404.1738 2012.2506 1843.1646 1430.88 2076.5186 1739.0234 18376631 bclA Organic Remediation Aromatics Aromatic carboxylic acid Thauera aromatica superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Thauera; 1478.775 3499.5134 2933.9373 1890.9159 1891.4602 1883.8342 2743.1967 2959.1799 2275.3984 3264.8242 2311.335 2948.4314 124893810 ChrA Metal Resistance Chromium Burkholderia dolosa AUO158 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia dolosa; 6898.0891 3476.9719 3854.5776 5874.1972 3794.315 3281.6189 3456.0255 2481.0733 2566.5985 3659.4689 4724.222 3258.6039 197296821 MFS_antibiotic Antibiotic resistance transporter uncultured bacterium BLR2 superkingdom:Bacteria; 2103.3634 1606.8235 986.475 2143.0737 1394.9478 2033.3821 2579.8033 4136.9862 1200.7141 1842.3748 1530.5114 117612289 iro virulence Iron oxidation Shewanella sp. ANA-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella; 2056.7937 645.0791 1476.2812 1739.6405 1214.1118 848.1262 968.936 1118.9432 1128.945 1126.0024 2011.9644 1261.5634 162451215 pstB Stress Phosphate limitation Sorangium cellulosum 'So ce 56' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Polyangiaceae;genus:Sorangium;species:Sorangium cellulosum; 795.7024 544.352519 441.1919892 613.4736 896.4779935 631.3447 71564287 nahA Organic Remediation Aromatics Polycyclic aromatics Terrabacter sp. HH5 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Intrasporangiaceae;genus:Terrabacter; 1562.3329 2493.998367 2938.2846 2282.496167 1767.098233 2921.5463 2303.779933 2681.9255 3131.718019 2700.416 2781.2923 2993.43225 152981778 sox Sulphur Sulphur oxidation Janthinobacterium sp. Marseille superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Janthinobacterium; 1036.2211 1497.0336 1421.7872 1330.3995 2355.2673 894.8197 1749.8291 696.6614 1120.1501 693.8497 734.3119354 1142.4765 156865943 ara Carbon cycling Carbon degradation Hemicellulose Clostridium leptum DSM 753 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium leptum; 778.9971389 1325.0388 923.9988 614.5933211 1265.4352 904.5862 660.2263 972.8688 794.9001 857.9407 775.7266 209171942 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae; 1383.7012 1961.3468 1528.0137 2466.5312 1806.6411 881.8568 1838.5516 1953.4252 1447.4307 144943185 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Geobacter bemidjiensis Bem superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter bemidjiensis; 904.6249 981.0989 1126.0068 472.0457 496.9421632 473.9933448 625.0532127 147886150 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured bacterium superkingdom:Bacteria; 1722.1548 3763.3098 2283.528 2671.5516 1815.1859 3902.6489 2810.4237 2866.788 4215.0628 3038.0894 1791.779 3191.9196 10440998 Catechol Organic Remediation Aromatics Other aromatics Acinetobacter radioresistens superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter; 1010.383226 1218.5318 733.8465039 657.4036 1036.0942 1275.785269 557.122 863.736 854.7288 70734322 dnaK Stress Heat shock Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 1316.4189 942.4171 726.0554 730.7453 636.3493312 492.5054 671.5838 935.8543148 765.6334 38201085 ZntA Metal Resistance Zinc Corynebacterium diphtheriae superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium; 1562.00155 2878.900824 4347.5534 2531.71355 2168.398301 5774.4732 2625.886077 2579.598136 5144.8809 3006.521205 1872.898 3247.771934 282887066 type_III_secretion virulence secretion Burkholderia sp. CCGE1001 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 7287.4511 9010.6813 13494.2274 6500.6261 5197.3775 11782.8627 8270.0227 10178.3375 10356.9878 10054.1484 5584.2068 11232.0724 262219779 pstS Stress Phosphate limitation Grimontia hollisae CIP 101886 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;species:Grimontia hollisae; 910.6739 861.9852 751.4739281 646.5374 620.2331745 29243597 holin_type_2 Bacteria phage LYSIS Pseudomonas phage gh-1 superkingdom:Viruses;order:Caudovirales;family:Podoviridae;genus:T7-like viruses; 1085.4102 1600.2865 1269.7478 1453.5129 1590.9515 1918.2636 1259.041 1119.5363 1475.3378 1619.5818 48968.47972 1787.5398 118744903 nifH Nitrogen Nitrogen fixation Geobacter lovleyi SZ superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter lovleyi; 3715.3197 5567.7321 7106.8133 5610.2322 2096.2421 7185.8532 9215.0318 3604.0835 6334.5867 5772.6636 3810.0378 4198.7892 32307927 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2509.1666 1865.8414 1080.6473 1794.0881 1911.0201 1165.8277 1329.8353 1259.728 1554.2477 1438.4062 1930.8093 1067.6077 77820052 nirS Nitrogen Denitrification uncultured organism 2357.9726 1932.931 2039.0175 2107.3916 2807.3195 1844.559 1792.2804 2452.1683 1953.4101 2136.4098 2258.2887 1565.3367 94264244 CopA Metal Resistance Copper delta proteobacterium MLMS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria; 1335.6002 1560.9248 995.0097 2122.6369 895.876 1412.6064 2411.7071 1945.0477 1306.1137 1611.3298 914.0880261 934.8846 219997123 pstB Stress Phosphate limitation Thioalkalivibrio sp. HL-EbGR7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Thioalkalivibrio;species:Thioalkalivibrio sulfidophilus; 382.7017878 610.2120786 544.767 590.1107547 564.5523909 584.7644996 149920361 linB Organic Remediation Pesticides related compound Plesiocystis pacifica SIR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Nannocystaceae;genus:Plesiocystis;species:Plesiocystis pacifica; 1508.5276 2008.7109 1660.3366 1113.9238 1335.6614 1268.8167 1319.9709 2828.829 1325.5558 1310.3717 2511.1957 1602.6337 9971379 gyrB other category gyrB Microscilla marina superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Microscilla; 1642.2327 1564.2761 1743.546 1596.1041 1479.5074 1467.4811 1211.5199 1540.0024 1441.6141 1370.2685 2359.5044 1743.6238 222100717 gyrB other category gyrB Thermotoga neapolitana DSM 4359 superkingdom:Bacteria;phylum:Thermotogae;class:Thermotogae;order:Thermotogales;family:Thermotogaceae;genus:Thermotoga;species:Thermotoga neapolitana; 1760.5981 1011.1049 1549.5462 674.0267486 557.0659081 3114.5062 601.224 1663.895829 149359228 pstB Stress Phosphate limitation Marinobacter algicola DG893 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter algicola; 1042.925392 1445.06945 1735.9419 1126.53235 1917.89925 1632.97985 1200.1567 1221.751467 1424.1349 1467.72375 1658.01 1905.74785 193498459 amoA Nitrogen Nitrification Archaea superkingdom:Archaea; 1744.2107 1969.0561 1053.0949 1429.6107 835.1281662 916.5811 826.017 1006.3976 943.4707 645.0188 3001.4658 187724468 pilin virulence pilin Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 2216.9604 1292.5666 1718.9598 2245.7914 1783.0587 2144.6343 2253.1014 1652.1453 1953.6038 1166.2504 991.9974 151302191 APS_AprB Sulphur adenylylsulfate reductase Desulfonatronovibrio hydrogenovorans superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfohalobiaceae;genus:Desulfonatronovibrio; 2989.613 1325.34045 1391.9958 1388.5318 1160.78805 1537.31195 1284.69415 1174.7015 1300.8309 1568.33905 1227.27285 1571.93505 153887456 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Ralstonia pickettii 12D superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 2355.9443 1990.3362 2799.6216 1760.6525 2273.8298 2332.8668 1754.2681 3160.9218 1943.0426 3130.8045 2575.5576 3330.9871 124267615 fccAB Sulphur sulfide oxidation Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 5163.0863 3695.49395 4551.08435 5671.62455 3542.4186 5071.6847 4763.1267 5424.2029 4112.05125 4630.8048 3744.59085 4287.9739 94272457 Mex Antibiotic resistance transporter delta proteobacterium MLMS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria; 1224.6091 897.4837 1252.9256 1279.8419 750.8206 1171.0873 1456.1803 1060.0882 976.0705 760.9311935 1079.802 164507582 nirK Nitrogen Denitrification denitrifying Sinorhizobium sp. R-31759 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium; 1630.5063 1565.0789 2167.5174 1145.4829 1640.645 1277.7489 1921.8922 2158.5829 1776.6491 1690.2599 146406223 nmoA Organic Remediation Aromatics Nitoaromatics Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 5292.1505 2366.3945 3974.4847 5439.4378 2792.3414 2858.7748 2777.2977 2810.1521 2748.2287 3377.2703 5386.4843 3736.984 27360594 hly virulence hemolysin Vibrio vulnificus CMCP6 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio vulnificus; 524.8297447 1082.633 957.6432 650.5365 1010.5216 1036.4268 1002.6816 1413.3654 929.7744 869.546 110679562 CopA Metal Resistance Copper Roseobacter denitrificans OCh 114 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter denitrificans; 1839.5665 2885.6663 2150.8552 1732.9835 4536.3533 21091.70127 2581.5812 1927.5933 2611.2139 3026.7667 886.0032673 2444.9623 49530591 benD Organic Remediation Aromatics Aromatic carboxylic acid Acinetobacter sp. ADP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter; 1658.2171 704.0187269 1354.014 685.8279 735.5443927 1303.4461 1477.2208 1531.8327 270154709 Ni_Fe_hydrogenase Energy process Energy process Dehalococcoides sp. VS superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides; 1191.4582 1073.3437 1105.2626 934.993 1594.9141 968.6889 1527.4443 1196.931 1085.9604 996.2371 1505.742 1094.5094 145602957 pheA Organic Remediation Aromatics Other aromatics Magnaporthe grisea 70-15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe;species:Magnaporthe oryzae; 5353.7107 4094.040292 5812.105615 3986.829 3719.039132 4801.5168 4112.725333 4867.168367 3970.341933 4381.488967 9482.8233 4348.292388 254255096 SMR_antibiotics Antibiotic resistance transporter Burkholderia dolosa AUO158 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia dolosa; 1042.4403 615.8095 1189.7661 1089.3779 991.451 578.4301995 916.54 811.8336 767.9794 929.5623 1157.4173 144906122 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 595.0239 1285.1759 1330.203 686.0268 1224.0655 832.108 712.9779 970.3027 972.4183 1022.1656 686.0705362 1006.7459 257202825 phoB Stress Phosphate limitation Roseburia intestinalis L1-82 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Roseburia;species:Roseburia intestinalis; 597.3074 513.4243154 933.8014 899.2112847 579.2236 380.4999092 479.0145029 777.4641 196223753 sigma_24 Stress Sigma factors Chthoniobacter flavus Ellin428 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Spartobacteria;genus:Chthoniobacter;species:Chthoniobacter flavus; 1386.8041 1541.5816 1216.202856 1361.986 1838.0132 1721.9922 855.6353376 1100.768626 1830.4323 1400.1276 1071.655154 229817785 phoA Stress Phosphate limitation Bifidobacterium angulatum DSM 20098 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium angulatum; 1617.9471 1202.1199 1825.1416 789.3884 600.7318368 1460.1375 1199.9005 1934.2991 1161.8183 1444.6147 1604.3777 124258969 vanA Carbon cycling Carbon degradation Others Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 2355.4742 3800.0466 3697.1586 2617.1176 2418.2129 4228.4417 2932.2031 4169.3651 4596.7751 3979.0638 2556.4821 4080.691 84382579 pimF Organic Remediation Aromatics Aromatic carboxylic acid Janibacter sp. HTCC2649 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Intrasporangiaceae;genus:Janibacter; 4148.5919 1795.3623 2666.9633 3399.1778 2323.9272 2327.318 2692.4409 3166.2719 2211.9233 3302.7455 2646.9587 3088.4738 46201104 ZntA Metal Resistance Zinc Magnetospirillum magnetotacticum MS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magnetotacticum; 3173.6354 17795.15017 2380.1574 2730.492 1662.4479 1775.7002 1797.8664 1638.507 2037.9698 2091.9562 1975.2068 2523.9782 182439407 TerD Metal Resistance Tellurium Streptomyces griseus subsp. griseus NBRC 13350 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces griseus; 2551.4783 6006.7131 3971.4023 3140.5822 4263.317 3056.2875 3289.2713 5265.0317 3080.3865 4096.814 5081.4439 3647.5864 170722064 iro virulence Iron oxidation Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1276.4443 2313.2707 1107.8943 1106.2258 2691.8369 1006.4086 1687.4999 1030.0736 1098.5413 1162.3827 1866.7357 1119.722 142112 sigma_70 Stress Sigma factors Nostoc sp. PCC 7120 superkingdom:Bacteria;phylum:Cyanobacteria;order:Nostocales;family:Nostocaceae;genus:Nostoc; 586.4004 1053.0193 606.2965 1192.3273 624.5700099 1199.2467 566.7341 686.1224 508.8328 1003.4356 260921331 AceA Carbon cycling Carbon degradation Others Brucella ceti B1/94 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Brucella;species:Brucella ceti; 3714.8227 1767.5836 2475.5364 3451.968 2282.4437 2557.7047 2877.2148 6117.2815 1942.4834 2457.903 2094.2007 3045.6564 147886248 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured bacterium superkingdom:Bacteria; 1103.8259 1167.7532 1015.4668 1101.2947 2834.7729 873.8361 1879.0298 851.0151 1036.7204 958.2824 944.4011 196477504 fnr Stress Oxygen stress Phenylobacterium zucineum HLK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Phenylobacterium;species:Phenylobacterium zucineum; 2210.6338 1957.3329 1788.2259 1391.6274 2380.5403 2159.5235 1625.4115 1611.6113 1676.0723 1702.2136 2947.3624 2116.6767 55540868 pmoA Carbon cycling Methane Methane oxidation uncultured bacterium superkingdom:Bacteria; 1073.4958 1196.4495 1625.8634 761.5675424 2328.9952 823.2279108 884.7736 2052.9744 889.6731 15552738 mmoX Carbon cycling Methane Methane oxidation uncultured methanotrophic bacterium M84-S38 superkingdom:Bacteria; 1013.5877 1496.8085 1121.2415 794.9633 1788.1876 1341.6837 1056.7177 1623.1587 1250.2687 1101.7377 873.0541 1298.833 33320478 dsrB Sulphur sulfite reductase Desulfobacterium oleovorans superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfococcus; 1487.2105 557.3862406 838.0877606 1178.083 841.064 686.2693 1310.7373 702.4957 651.9677 774.5608 1263.220774 154147972 cydB Stress Oxygen limitation Campylobacter hominis ATCC BAA-381 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Campylobacteraceae;genus:Campylobacter;species:Campylobacter hominis; 8143.3974 8863.0079 6163.0989 5720.7713 9996.6427 4938.297 19936.37827 5089.9555 5886.3357 4729.7172 7361.2586 5343.5589 192284125 PobA Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris TIE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 7266.5908 2454.6621 5135.5935 5850.2677 3285.8392 3083.6575 3286.6561 2894.2163 3666.6309 4781.7194 3729.5074 4386.1945 256784623 endochitinase Carbon cycling Carbon degradation Chitin Streptomyces lividans TK24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces lividans; 1878.9635 798.818 1248.3312 1934.6384 936.6011 1371.1626 1510.2505 1375.0454 946.1616 896.1522 1202.1431 1409.1175 194291858 fnr Stress Oxygen stress Cupriavidus taiwanensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus taiwanensis; 1755.346 1583.9378 1623.9588 1668.1805 2588.3558 1655.7358 1242.9139 1590.8645 1935.4708 1978.1365 1297.2805 1662.6029 146403045 biotin_carboxylase Bioleaching Carbon fixation Acidiphilium cryptum JF-5 3658.0847 5050.7539 4289.7153 2784.1041 5670.3989 3881.6951 3374.128 3533.2977 3944.4813 3914.8344 4003.4599 3729.1703 6540593 fcbC Organic Remediation Pseudomonas sp. DJ-12 superkingdom:Bacteria;phylum:Proteobacteria; 1285.585719 991.1311594 1213.9743 1153.9617 952.2748347 810.9128031 763.5901471 792.509756 1169.9983 1727.969441 1294.4936 111019975 xylC Organic Remediation Aromatics BTEX and related aromatics Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1878.8963 4614.4361 4462.6334 2561.3276 1321.4417 4817.7045 4337.6272 4813.9055 5244.0133 3536.9729 1366.5435 4353.8136 22298333 dnaK Stress Heat shock Thermosynechococcus elongatus BP-1 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Thermosynechococcus;species:Thermosynechococcus elongatus; 5889.8071 7016.6753 6797.8492 4311.2001 4914.0083 4674.8869 3131.506504 8107.3691 5528.8764 4904.7848 5288.7282 4244.94308 33322839 gyrB other category gyrB Lactobacillus delbrueckii subsp. lactis superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus delbrueckii; 571.7323 1040.5571 673.1649 839.6594873 899.0524 815.6249 572.4989409 1128.4791 1560.6565 942.7944 161380216 CopA Metal Resistance Copper Oceanibulbus indolifex HEL-45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 2740.8468 1909.0896 2335.9138 2788.0901 2541.7533 2607.0605 1751.8937 1826.8736 1780.6448 2325.0446 3049.0585 2573.9777 145569487 narG Nitrogen Denitrification Pseudomonas stutzeri A1501 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas stutzeri; 1606.5833 2834.8108 2022.3552 1894.7101 1295.1069 2714.1026 2997.0328 2340.9421 3567.545 3531.8922 1024.961561 2868.6464 81159395 INF1_elicitin_Oomycetes soil_borne_pathogen oomycete elicitor Phytophthora ramorum superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 493.5591763 675.7684143 370.3057971 509.5051 506.6888 238885480 sigma_70 Stress Sigma factors Selenomonas flueggei ATCC 43531 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Veillonellaceae;genus:Selenomonas;species:Selenomonas flueggei; 802.0067968 1310.4444 1097.5421 776.3197545 1328.2978 1401.3636 3038.9229 850.5471 928.6019 737.7267546 211997240 ssb Bacteria phage REPLICATION Kluyvera phage Kvp1 superkingdom:Viruses;order:Caudovirales;family:Podoviridae;genus:T7-like viruses; 694.6781 458.5154 675.3882 751.6243 779.9574 461.09898 683.9123 1122.986 682.8374 486.2765 166028472 ppk Phosphorus Phosphorus utilization Dorea formicigenerans ATCC 27755 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Dorea;species:Dorea formicigenerans; 1464.5905 1750.8526 1785.9141 1582.1326 2141.6881 2088.4512 1270.7751 1254.8257 1039.2715 1578.0762 2151.1149 1758.235 255108555 pstB Stress Phosphate limitation Sideroxydans lithotrophicus ES-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Gallionellales;family:Gallionellaceae;genus:Sideroxydans;species:Sideroxydans lithotrophicus; 1272.1191 670.0545 577.2049202 957.2637865 469.235141 922.5275 705.6791 518.7038 712.9666 967.801 84796654 todC Organic Remediation Aromatics BTEX and related aromatics Arthrobacter sp. 3YC3 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 1209.556 2836.0638 1179.971333 1171.908875 3059.893068 1484.9101 1633.03925 1246.296267 1143.37805 1295.53985 1976.51615 1117.7537 23010423 MFS_antibiotic Antibiotic resistance transporter Magnetospirillum magnetotacticum MS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magnetotacticum; 3089.4552 2030.926259 1592.5971 2218.4511 1318.1048 948.2735 1597.6307 1395.1748 1259.6111 1169.2054 1185.1017 154279208 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Ajellomyces capsulatus NAm1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces capsulatus; 619.4035 975.7612 1571.9074 582.542 1001.129 772.4166 1150.039 914.8026 959.0305 1071.3292 218221760 sigma_24 Stress Sigma factors Parabacteroides johnsonii DSM 18315 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Porphyromonadaceae;genus:Parabacteroides;species:Parabacteroides johnsonii; 1493.6043 1004.3555 1406.3027 1728.2304 1212.1589 1546.8242 1756.5277 4197.9191 1159.1973 1528.6981 3539.4442 45686322 tape_measure_protein Bacteria phage STRUCTURAL Enterobacteria phage T1 superkingdom:Viruses;order:Caudovirales;family:Siphoviridae;genus:T1-like viruses; 697.126815 1023.8516 707.8403 765.1437 1029.6797 850.6837 641.8166 626.7990074 740.22 668.2115 1076.3263 687.4963 148993543 srt virulence surface protein Streptococcus pneumoniae SP9-BS68 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus;species:Streptococcus pneumoniae; 1400.9752 1856.4246 943.22 1328.5777 812.8901 1958.481 1445.4551 1235.3984 1619.54 1562.633 1389.2056 39648017 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 2112.7257 1878.138 2125.92 830.7001 879.7414 2051.0455 1822.6765 2341.0389 2095.0263 1957.6238 2113.9852 148548493 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Pseudomonas putida F1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 3781.4872 3655.648 5235.2907 2863.5909 2243.2354 4455.2239 3433.1768 5313.1341 4791.3473 4416.7105 1687.4881 5180.1852 7769067 arsB Metal Resistance Arsenic Acidithiobacillus ferrooxidans superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus; 1479.173103 3187.0278 1289.5797 3086.3126 2084.9514 4648.8489 2781.1019 1918.3701 2376.0641 1883.0484 3664.23 3157724 nifH Nitrogen Nitrogen fixation unidentified nitrogen-fixing bacteria superkingdom:Bacteria; 1845.235 1814.7947 1786.3503 2123.1985 1420.5242 1623.6247 1015.4707 1540.0145 1128.281 2039.9428 1930.9055 254507402 pilin virulence pilin Vibrio parahaemolyticus 16 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio parahaemolyticus; 1704.2093 1762.461 1548.6297 1653.5241 2858.15 1736.9634 1380.1207 1145.4757 1470.8646 1551.4777 3018.5953 1406.6045 166710309 hopAF1 soil_borne_pathogen secretion system type III Xanthomonas oryzae pv. oryzicola BLS256 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas oryzae; 1238.6593 410.7063216 808.5844 1108.2804 666.1042014 571.39 666.0532 926.5579 425.8605626 448.8913 1043.7249 781.6041 229543695 obgE Stress Radiation stress Bacillus coagulans 36D1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus coagulans; 989.517 564.8902 571.5472 668.4803 800.301 663.1768 1078.0179 467.1064577 570.1688 537.9884 684.6530848 146406146 cat_bac soil_benifit Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 5239.6705 2836.9133 4396.7841 5715.6484 4075.883 3624.8508 3639.9506 2305.9365 4189.6564 4493.96 6672.8336 3388.9514 33391477 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 587.7302 2670.8014 1624.3368 1291.7588 1834.9228 2401.1273 2266.0696 1612.8217 1980.3541 2474.8872 691.9565635 2175.3276 146310812 CusF Metal Resistance Copper Enterobacter sp. 638 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter; 526.5893857 968.9064159 1089.144 516.6346 755.1866737 626.2257 116205547 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 3028.2846 2088.7597 3537.8494 3129.09 1722.053693 3158.1997 3100.0355 3772.0666 2979.5766 3060.7127 3245.915818 3064.7718 255340987 Tet Antibiotic resistance other Flavobacteriaceae bacterium 3519-10 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae; 2605.7582 1988.8708 2367.8425 2748.6412 2703.5539 2428.5272 2184.6998 1472.63 2850.3782 2745.1488 2629.3968 2434.0039 149209717 tftH Organic Remediation Aromatics Chlorinated aromatics Magnaporthe grisea 70-15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe;species:Magnaporthe oryzae; 1919.4753 2006.4258 2102.5695 1646.9904 2425.683 1717.8344 2584.0588 1260.6116 1991.3391 1783.3713 2403.5895 2086.2733 270042169 pilin virulence pilin Serratia odorifera 4Rx13 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Serratia;species:Serratia odorifera; 3065.3443 4896.8366 5376.9489 3152.0881 3317.0087 5928.508 4147.6458 4493.4086 6849.6911 4934.6104 1420.0463 5587.1296 149176966 groEL Stress Heat shock Planctomyces maris DSM 8797 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Planctomyces;species:Planctomyces maris; 1050.9295 1739.5967 1305.490128 1009.65825 925.396 1340.0684 968.8844 2281.0865 861.1593 1841.7719 1224.1256 1274.156 119962401 atzB Organic Remediation Herbicides related compound Arthrobacter aurescens TC1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter aurescens; 5025.9828 6624.482332 4988.60655 5660.83775 5891.36285 4981.61045 8080.52305 4057.36425 5080.8117 4909.42445 5682.8998 3845.48325 145282497 per_arc soil_benifit Pyrobaculum arsenaticum DSM 13514 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Thermoproteales;family:Thermoproteaceae;genus:Pyrobaculum;species:Pyrobaculum arsenaticum; 1713.8268 1894.4867 1863.3078 1712.9988 2314.9403 1986.195 3065.9918 1322.5854 1946.0014 1445.2177 1700.7497 1436.3625 83954666 sox Sulphur Sulphur oxidation Sulfitobacter sp. NAS-14.1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sulfitobacter; 5466.5152 5610.5216 6110.2043 4960.0244 7829.2517 5472.8647 5508.6456 4499.0976 5460.7418 5738.5613 7960.9368 5310.4228 295887403 pcbC soil_benifit Burkholderia sp. Ch1-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 6406.776 3424.9313 4725.0275 5811.9694 3594.8417 4955.3921 5786.9937 4351.4133 4138.506 4069.4674 4822.2184 4873.226 68349021 nirS Nitrogen Denitrification Pseudomonas sp. C10-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 5434.3045 3268.5164 4073.2223 6526.7336 3241.3412 4740.3057 5168.7713 4727.7957 3694.7397 4576.4019 2727.0087 4645.4063 77962566 mauAB Organic Remediation Herbicides related compound Yersinia mollaretii ATCC 43969 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia mollaretii; 992.5124 1901.2275 1938.7968 1460.389 2073.9884 2247.9696 987.3818 1755.4248 1780.736 1714.9483 1203.2421 163782254 mer Metal Resistance Mercury Hydrogenivirga sp. 128-5-R1-1 superkingdom:Bacteria;phylum:Aquificae;class:Aquificae;order:Aquificales;family:Aquificaceae;genus:Hydrogenivirga; 1265.1881 2152.2048 1228.223 1661.4413 1788.2444 1807.4973 1508.3923 990.19 1849.7812 1850.839 1052.7218 260850334 mnp Carbon cycling Carbon degradation Lignin Russula xerampelina superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Russulales;family:Russulaceae;genus:Russula; 854.0926 615.733 583.8204077 966.9768 508.5886546 449.5228979 320.4904682 422.9256188 556.7027 686.5022 874.639631 508.4384999 84042967 pcaG Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 2544.108433 2387.602333 2276.975567 2809.024467 2442.228367 2385.0543 2268.749867 1916.4412 2190 2164.459933 1867.4965 2022.005933 218564218 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 869.7144 581.2658486 748.9289 803.7982 837.1962 749.6091 687.514 516.804 643.5804 769.0334 1111.7385 1195.2362 38639720 SilE Metal Resistance Klebsiella pneumoniae superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella; 1268.7073 1007.4646 1518.0531 969.1547 1047.0024 890.1384 872.5861 2399.8657 1049.5808 1054.3027 2208.8461 1238.5892 85823677 PobA Organic Remediation Aromatics Aromatic carboxylic acid Roseobacter sp. MED193 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 836.9664 613.9363 488.3974527 939.568 1093.7377 1040.3893 876.6523 1230.3993 800.28385 743.2556 1021.4541 948.4315 228699097 AceA Carbon cycling Carbon degradation Others Bacillus cereus Rock3-44 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus cereus; 616.6365 489.3167 310.5830275 374.8911271 465.0048 229567699 xylA Carbon cycling Carbon degradation Hemicellulose Beutenbergia cavernae DSM 12333 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Beutenbergiaceae;genus:Beutenbergia;species:Beutenbergia cavernae; 3622.6906 5243.2047 4446.1892 3089.6959 6562.8432 4073.9433 4667.6371 3369.8779 4873.1578 3812.4045 2807.8996 3718.3355 115517964 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris BisA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 24710.1347 26876.7505 23285.4514 24921.6329 31642.5549 27832.4403 23008.0264 27978.8162 34772.5409 24044.3808 29322.3168 28096.7284 263238076 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Bacteroides sp. 3_1_33FAA superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides; 463.5351 435.1536829 588.2128 444.8154186 817.0046127 256362602 obgE Stress Radiation stress Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 4188.4724 3884.5425 3225.3232 3061.0863 7095.3787 4367.3707 3812.8298 3722.1969 5020.2256 4186.6295 3208.7741 3275.2887 238632213 phenol_oxidase Carbon cycling Carbon degradation Lignin Coriolopsis gallica superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Coriolopsis; 2664.5379 5289.0142 5030.6911 2710.3977 6348.1455 3606.1255 3645.1695 2999.124 3575.6876 4073.13 2281.1361 2951.6859 110835543 pstB Stress Phosphate limitation Alcanivorax borkumensis SK2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax;species:Alcanivorax borkumensis; 978.9458 726.3257 886.6271 725.0316 564.4155 528.8151 752.1609 967.3987 116201105 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 6464.0647 10676.4391 6691.2894 7590.6204 7845.5696 10012.5168 9866.6669 7482.8129 9583.4867 9825.5711 2591.1496 11638.3164 89952053 ahpF Stress Oxygen stress Saccharophagus degradans 2-40 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Saccharophagus;species:Saccharophagus degradans; 1935.3523 2609.5352 2418.9778 2221.7248 1297.875 2906.7845 3283.7656 2004.177 2802.2798 2526.3757 1591.1014 2698.379 207739251 glnA Stress Nitrogen limitation Ralstonia solanacearum IPO1609 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 12335.0398 8642.0902 9917.0487 13616.2164 7246.4103 11488.2538 11492.0211 12311.183 9915.7144 10804.7236 9989.5743 11672.6336 227382400 narI Stress Oxygen limitation Kribbella flavida DSM 17836 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Kribbella;species:Kribbella flavida; 821.2507 533.6072 1009.9417 943.8416 846.7951 1061.8449 770.9253767 620.1661 953.2798 633.8331251 524.7799399 113530082 ZntA Metal Resistance Zinc Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 2057.9354 846.1566 1582.2886 2201.7265 1363.6456 1415.3883 1697.6855 1826.8373 1147.6649 1828.3163 1146.622141 1053.8342 13177567 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae; 879.1707 1912.6703 825.6683 1075.379 1595.1036 1468.6476 1380.9466 837.0347 1369.9848 1588.0813 1596.1383 224367311 phoA Stress Phosphate limitation Desulfobacterium autotrophicum HRM2 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfobacterium;species:Desulfobacterium autotrophicum; 666.1479 658.3624 261819808 vip virulence virulence protein Pectobacterium wasabiae WPP163 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium wasabiae; 437.4924443 1132.6475 490.0830069 24235.93205 898.155 1201.2311 557.8859 579.6027724 645.6886348 91788891 Arylest Organic Remediation Aromatics Other aromatics Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 5387.6004 2797.2585 3859.2302 5398.0713 3452.8537 4475.8038 4508.3386 5511.9105 4046.2464 3986.9585 4628.8444 3820.3943 4105518 rubisco Carbon cycling Carbon fixation Thiobacillus intermedius K12 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Thiomonas;species:Thiomonas intermedia; 2438.7545 1721.10505 2792.977 12428.51272 966.8415 2293.816 1311.65495 1874.4313 2097.6822 1585.7587 1567.197 2151.8178 255710511 chitin_synthase Fungi function major biomolecule Lachancea thermotolerans superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Lachancea;species:Lachancea thermotolerans; 1780.2361 1477.3973 1259.861 18564.47415 2366.5103 1306.9552 2655.3806 871.1735157 1298.8681 1178.6746 1595.9544 1931.1939 39995179 cytochrome Energy process Energy process Geobacter sulfurreducens PCA superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter sulfurreducens; 2869.3402 1593.533 2032.3438 2425.8864 2236.9218 1891.7162 2166.9095 1252.417 1755.2501 2086.7638 2405.055 2185.6543 259021216 fnr Stress Oxygen stress Rhodobacter sp. SW2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter; 4530.687 2155.2885 6840.828 5350.8559 3283.8295 3238.6794 3100.5402 3031.0188 8439.2234 2995.0204 5991.4238 2893.5981 186472065 phtA Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 614.7326286 1402.4584 971.6011 801.2778 874.3296 868.3765 1439.1254 587.351 1076.4122 1003.531616 1033.1395 152067462 sigma_32 Stress Sigma factors Beggiatoa sp. PS superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Thiotrichales;family:Thiotrichaceae;genus:Beggiatoa; 777.5464424 359.6595181 665.5901 440.2743686 177840817 sigma_24 Stress Sigma factors Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 2265.1957 2517.0497 1957.4364 2658.895 1534.509 2199.5614 1951.751 1650.0907 2143.2645 2011.6136 1817.6054 2057.2157 145589952 hrcA Stress Heat shock Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Polynucleobacter;species:Polynucleobacter necessarius; 522.4358 755.6335 434.4985344 656.1125436 452.6487392 725.8819 530.5574048 450.7556 690.3992 500.6814 221728823 catB Organic Remediation Aromatics BTEX and related aromatics Diaphorobacter sp. TPSY superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax ebreus; 1249.0425 861.0017 951.6529 1084.5152 583.714 654.1012 1282.5324 810.8126 801.1816 778.9949 296419642 arsA_fungi Fungi function metal resistance Arsenic Tuber melanosporum Mel28 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Pezizomycetes;order:Pezizales;family:Tuberaceae;genus:Tuber;species:Tuber melanosporum; 987.5156 1305.3856 884.5968 1061.5719 1018.6011 1371.4168 1165.3063 852.8428 1292.8339 1733.7476 1042.091101 1369.5409 139478587 mer Metal Resistance Mercury uncultured soil bacterium superkingdom:Bacteria; 7011.7129 3103.2327 4722.6721 5688.3081 5375.5782 3857.3313 3718.1087 3778.7118 3955.5245 4614.0663 6933.3324 5006.0315 38198987 sigma_24 Stress Sigma factors Corynebacterium diphtheriae superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium; 1764.3591 1222.06394 860.437 26891726 contractile_tail_sheath_protein Bacteria phage STRUCTURAL Vibrio phage VHML superkingdom:Viruses;order:Caudovirales;family:Myoviridae; 11033.9472 4107.5499 8560.0058 9193.4911 5532.5821 4983.4501 5608.7004 6355.2878 6023.6766 6855.9655 9571.4741 5722.6679 254559345 sox Sulphur Sulphur oxidation Methylobacterium extorquens DM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 2590.029 4305.1997 3384.8504 3036.7413 2238.4765 3545.6722 3412.7712 5134.6324 3644.1601 4797.9665 2127.8111 3975.254 169856134 chitin_synthase Fungi function major biomolecule Coprinopsis cinerea okayama7#130 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis;species:Coprinopsis cinerea; 3505.2654 1437.6788 2239.0808 3905.2876 1644.1899 1374.6623 1748.9918 1432.1533 1619.4468 1926.179 3465.0686 2570.2425 3329184 ZntA Metal Resistance Zinc Chlamydia trachomatis D/UW-3/CX superkingdom:Bacteria;phylum:Chlamydiae;class:Chlamydiae;order:Chlamydiales;family:Chlamydiaceae;genus:Chlamydia;species:Chlamydia trachomatis; 527.3953282 910.9525 760.4733 895.7633 782.6482633 1451.2247 892.2543 884.5736 777.1514 729.2907938 886.2491 24983490 MFS_antibiotic Antibiotic resistance transporter Pseudomonas putida KT2440 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 2561.557 816.0205 1568.2871 1810.0183 1131.4292 884.9037 1257.6416 1831.4127 1547.3282 1432.1977 1949.9569 1311.659 258560757 amyA Carbon cycling Carbon degradation Starch Corynebacterium genitalium ATCC 33030 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium genitalium; 6279.3303 3338.2819 4960.4945 6049.5941 3881.1497 4546.4124 4158.9784 4903.3077 4464.3267 5576.3797 3867.0242 4799.7991 15076977 xylF Organic Remediation Aromatics BTEX and related aromatics Pseudomonas sp. JR1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 5305.1933 4986.2638 5382.1105 5376.8675 5016.4656 5073.2775 4961.6878 5254.8036 4228.6105 4679.6692 6007.4722 4697.0674 56965687 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus clausii; 796.8845 32957.22736 562.5370695 91788887 ChrA Metal Resistance Chromium Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 836.2142 710.2063 660.8072349 1113.8279 636.9303 482.0068995 954.0013 891.4623 170690278 MFS_antibiotic Antibiotic resistance transporter Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 2868.5342 2209.4571 2172.8825 2887.8355 28771.61383 2412.7783 1701.5165 1878.111 2149.2404 2738.1921 2945.008 2514.6539 227369320 ara Carbon cycling Carbon degradation Hemicellulose Chryseobacterium gleum ATCC 35910 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Chryseobacterium;species:Chryseobacterium gleum; 712.4934517 764.55522 1049.431 700.7780182 957.3819 767.1747 927.4344853 822.249403 780.6577 1129.756871 720.3965889 39837110 Catechol Organic Remediation Aromatics Other aromatics Pseudomonas stutzeri superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 2838.7548 2118.7939 2163.9262 1653.3734 1156.7592 2008.2107 4911.8497 3075.7199 1133.4299 6314.2922 13790.93023 227195441 Tet Antibiotic resistance other Lactobacillus ruminis ATCC 25644 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus ruminis; 839.9484 2518.9866 1790.683 1617.2257 1895.5175 2396.1918 1540.6924 1527.7771 1388.6115 2066.8986 1753.0513 2931.4444 183982392 pulA Carbon cycling Carbon degradation Starch Mycobacterium marinum M superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium marinum; 1516.6205 1998.47865 2260.89005 1992.28445 3886.91335 1853.0467 2399.04975 2066.0601 1405.782 1740.0455 1758.75715 2456.7721 146341632 nifH Nitrogen Nitrogen fixation Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1917.4604 1942.1566 1668.4932 2544.5481 2437.6275 1754.0884 2113.4009 1116.4618 2181.042 2120.5423 2357.0538 1203.1323 39578147 CODH Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 1002.3315 2264.7726 1364.7488 1123.8545 1553.1841 1887.2143 2010.2033 1255.9151 1755.984 2081.3257 2142.5622 87136287 pcc Carbon cycling Carbon fixation Novosphingobium aromaticivorans DSM 12444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium;species:Novosphingobium aromaticivorans; 12586.8685 10510.7859 9895.7193 10149.8522 13371.1366 12453.0091 8768.6105 7712.8546 15506.7262 10463.5551 7964.1801 8130.1408 54026349 TerD Metal Resistance Tellurium Nocardia farcinica IFM 10152 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Nocardia;species:Nocardia farcinica; 1862.4417 1259.9074 1588.875 2263.7625 2363.363 1464.071 1525.4485 802.138 1718.8355 1924.0351 2261.3639 2023.9559 121495584 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1475.699 1610.659 1995.5153 1204.396 2309.5242 1216.9931 1366.7312 3575.1542 1269.7923 1165.2748 2382.3998 1643.1167 148835866 ArsC Metal Resistance Arsenic Vibrio shilonii AK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio shilonii; 416.4439131 626.3476 516.9035 856.4131 426.2906252 353.7072631 563.4489717 15890159 glucoamylase Carbon cycling Carbon degradation Starch Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 1197.946 947.0012 477.8272122 718.2708 469.2500972 733.0468 562.3408 455.7475 1154.478186 35764426 cumA Organic Remediation Aromatics Other aromatics Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1680.1252 2452.7125 2457.0131 2214.5473 2951.7153 2687.3159 2052.5972 1527.3413 2201.3461 2374.4785 2905.6316 2912.0681 118618491 TehB Metal Resistance Tellurium Mycobacterium ulcerans Agy99 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium ulcerans; 4087.2734 5380.5057 5977.4006 4144.4875 2738.9514 5330.5257 5291.3307 6396.2042 5417.2097 6265.733 4301.389 5920.0979 260089470 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Streptomyces flavogriseus ATCC 33331 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces flavogriseus; 3871.2149 2621.5769 3031.5554 3773.2435 1984.7221 3201.1691 1884.7649 1821.3057 2631.9956 2403.5113 2148.1119 2259.1636 107856921 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 3463.6925 2698.9369 3944.7369 3672.5256 3296.8926 2694.3603 3051.8146 1355.1096 2544.5937 2485.2497 3539.2565 2875.7048 83316848 nirK Nitrogen Denitrification nitrifying uncultured bacterium superkingdom:Bacteria; 4840.691 2840.0607 3219.3038 4350.8544 2565.5096 2848.8288 2721.0248 2274.4775 3146.3195 13196.64113 5118.9703 3112.3269 302505952 phospholipase_C_fungi Fungi function carbon degradation Arthroderma benhamiae CBS 112371 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma;species:Arthroderma benhamiae; 1361.2424 1018.8947 868.55 1279.8419 1751.1027 1153.2943 1334.5954 1441.0863 2427.2656 923.778 1940.4432 2353.34 171989881 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Exiguobacterium sibiricum 255-15 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;genus:Exiguobacterium;species:Exiguobacterium sibiricum; 2125.7416 1568.8634 2533.36 2135.0332 701.2353803 1508.6217 2433.915 1448.8481 2386.4266 1091.101288 1451.3719 16580707 mnp Carbon cycling Carbon degradation Lignin Phlebia radiata superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Corticiales;family:Corticiaceae;genus:Phlebia; 1528.590967 1141.9708 1569.619867 1476.9356 2361.4955 1041.6157 1322.9149 1531.557633 1226.217533 1488.104367 2554.0556 1547.864533 221184109 akbF Organic Remediation Aromatics BTEX and related aromatics Burkholderia multivorans CGD2M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 1818.7196 1258.10435 1463.123 986.8382 1092.863643 996.0738 1054.8767 1655.3077 1520.0581 838.43845 1112.7322 50542706 rubisco Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 1101.5827 1240.529072 999.5751 819.5490782 1506.6217 1025.8627 1053.9553 997.8100064 1083.4359 1037.9596 154317330 lactase_fungi Fungi function carbon degradation Botryotinia fuckeliana B05.10 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Botryotinia;species:Botryotinia fuckeliana; 1158.7371 1039.2446 1708.8257 1532.7256 445.4724708 1423.1057 1607.5983 763.5496 1204.3486 1233.647 770.6371324 801.2001 78518981 CODH Carbon cycling Carbon fixation Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1222.1376 549.3584107 963.837 1118.8823 908.7291 1270.0295 1026.987 912.9621 1110.6039 870.7476456 1838.1023 42558528 ZntA Metal Resistance Zinc Comamonas sp. B0039 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas; 7050.586 5730.2379 8035.4066 3996.9743 9588.9368 6271.6202 7267.4101 4913.1363 6402.2671 5249.0799 7532.1456 6141.9989 311278268 sir Sulphur sulfite reductase Enterobacter cloacae SCF1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter;species:Enterobacter cloacae; 1879.8634 1316.6373 1103.3289 1798.759 1696.2338 844.9106 888.6329 873.0086 1235.2416 872.5799 1992.1441 1122.386 255259905 B_lactamase_C Antibiotic resistance Beta-lactamases Sideroxydans lithotrophicus ES-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Gallionellales;family:Gallionellaceae;genus:Sideroxydans;species:Sideroxydans lithotrophicus; 2372.6273 2311.6142 2010.9708 1550.6831 2120.2069 2191.2158 1980.74 1181.3528 1803.465 5445.4196 2038.5946 255953199 sir Sulphur sulfite reductase Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 963.9017 717.2024 802.3865 1118.5995 415.6806 519.7424 73542699 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 571.5845 893.457 1420.3333 984.4 1811.5836 749.7138 1347.465 1047.528 979.3261 781.9195 834.7108 1470.1715 134103041 CopA Metal Resistance Copper Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 5223.1354 10144.8325 8842.8424 8075.2251 16727.9793 6204.1225 10193.8781 5143.408 7908.1484 5395.0254 8416.9477 5328.4396 218169885 amyA Carbon cycling Carbon degradation Starch Cyanothece sp. PCC 7424 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 605.356831 587.0623 441.5656169 654.5763362 403.5351334 436.8214005 567.3243518 126437114 CopA Metal Resistance Copper Mycobacterium sp. JLS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 2313.6998 2944.4222 3398.4884 2751.7917 1051.439 3405.6814 3129.7778 1856.5654 2519.5368 2629.7994 1920.9592 1623.5756 218433141 HcaB Organic Remediation Aromatics Aromatic carboxylic acid Escherichia coli superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia;species:Escherichia coli; 1382.358 2310.5438 1584.0479 1434.7746 2206.3591 1791.0155 2054.0769 1124.2206 1609.0326 1256.7392 1501.9942 1651.6033 167074384 scnABC Organic Remediation Others Rhizobium leguminosarum bv. trifolii WSM1325 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1901.3685 1505.1761 2174.9326 2295.2942 3475.3018 2229.7731 2299.3677 1920.1371 1599.3174 1822.8001 2804.3439 1898.6482 20278751 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 874.0262 445.021 919.3317 470.589 1262.2699 593.059 612.7031 932.5226 14349112 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Azotobacter sp. FA8 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Azotobacter; 1076.424 2141.0424 1050.4633 915.1042 1958.2925 1231.1867 1861.9506 804.0263 1461.6619 1170.8692 1328.1522 1495.3978 121543059 mer Metal Resistance Mercury Candidatus Desulfococcus oleovorans Hxd3 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfococcus;species:Desulfococcus oleovorans; 2234.6776 1784.442 2871.4612 2446.4738 1348.4022 1468.872 1312.4349 2142.081 1836.6412 1767.649 1788.6558 2139.4038 224950732 grpE Stress Heat shock Clostridium methylpentosum DSM 5476 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium methylpentosum; 384.5420232 751.1864 454.4185641 414.1166479 378.7801741 895.6413 348.9438964 605.5467 345.5568707 118171653 pcaG Organic Remediation Aromatics Other aromatics Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 6093.856435 2045.881 1548.8478 1486.9211 1432.8859 2299.4096 1885.2696 1766.2554 2072.1011 2030.5854 1525.5383 1911.7214 214044410 nagI Organic Remediation Aromatics Aromatic carboxylic acid Roseobacter sp. GAI101 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 602.1599259 1208.5889 750.8971865 1445.7783 2550.4281 593.8356 557.7960277 674.8877384 251776983 cytochrome Energy process Energy process Geobacter sp. M21 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 978.5966 476.3943576 925.3801 555.6064 1529.0601 527.9647 484.8584 1462.6899 605.1983 19553602 nahA Organic Remediation Aromatics Polycyclic aromatics Corynebacterium glutamicum ATCC 13032 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium glutamicum; 848.8137 439.542796 534.7906871 599.0741 1050.6614 573.9604 472.0018638 546.4302 167950178 pstA Stress Phosphate limitation Endoriftia persephone 'Hot96_1+Hot96_2' superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;genus:Endoriftia;species:Endoriftia persephone; 7001.9208 7654.0962 5925.0003 7363.9948 7932.7645 6622.9733 4050.629717 4949.2555 6417.4806 7041.6078 7151.1635 5959.4136 167348190 tfdA Organic Remediation Aromatics Chlorinated aromatics Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 3472.4235 1325.1238 1185.0989 2842.7706 1676.004 1135.6459 1323.8707 1591.034 1341.0605 1499.9222 3125.649 1483.1074 218549628 iro virulence Iron oxidation Escherichia fergusonii ATCC 35469 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia;species:Escherichia fergusonii; 2707.1721 4953.5154 3567.9607 3113.2967 2536.4067 4963.9471 4131.5186 4304.0493 4964.0777 5331.9238 1431.2177 4311.0236 170721876 Catechol Organic Remediation Aromatics Other aromatics Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 14900.528 7805.3121 7559.6747 10800.6764 9055.662 6754.5288 6159.214 6630.4058 8202.3655 7139.0797 13470.8594 5689.2021 225121931 CODH Carbon cycling Carbon fixation Rhodobacterales bacterium HTCC2083 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 1443.2869 867.4112 1475.5542 614.1139084 1272.0173 1307.1357 2222.6713 1098.2151 1663.8122 1044.7571 148851309 sped_bac soil_benifit Bacillus sp. SG-1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 1144.61975 1049.5533 1259.054 1070.66705 1642.038 1276.1752 914.40655 1149.5488 958.3347 1123.11595 2077.936 1515.33035 120593981 cbdA Organic Remediation Aromatics Chlorinated aromatics Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 2198.3432 17055.82527 1475.9468 2235.9018 1162.1335 1087.6987 885.597 1348.9352 1204.0001 1454.113012 1702.7746 146400990 glycosyl_transferase_EPS Bioleaching EPS Acidiphilium cryptum JF-5 875.4768 737.9539969 854.1777 757.865 468.0869092 484.5826781 511.490274 1011.988276 134284881 pstB Stress Phosphate limitation Magnetospirillum gryphiswaldense MSR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum gryphiswaldense; 4381.1452 3024.8278 3532.8187 2425.9686 2138.5408 3753.8338 3482.774 3165.5215 3775.2106 3714.1286 2843.504 3268.6011 212171574 alkB Organic Remediation Other Hydrocarbons Corynebacterium variabile superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium; 2453.4897 5026.097 5431.4865 2533.1655 2852.4811 5358.6286 4428.6664 4942.5981 6386.7507 4305.6638 1560.7584 5647.1537 163259422 BADH Organic Remediation Aromatics Other aromatics Bordetella petrii superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella; 5888.5714 1942.8319 2505.1534 3971.6932 2820.0413 2616.3184 3517.8156 3991.0692 2713.2703 2602.5197 4078.2005 2915.3913 209486087 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1489.1985 1483.8323 1329.7959 1323.0987 2846.9828 1886.4067 1862.5356 1658.9632 2195.5799 1855.9421 1466.6698 159890074 clpC Stress Protein stress Herpetosiphon aurantiacus ATCC 23779 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Herpetosiphonales;family:Herpetosiphonaceae;genus:Herpetosiphon;species:Herpetosiphon aurantiacus; 3338.0065 3766.2279 1380.2043 3256.7372 2481.6326 1794.4554 2589.9659 1834.4993 2323.2056 1890.0333 2967.7593 2259.1636 197721534 carA Organic Remediation Aromatics Heterocyclic aromatics Streptomyces pristinaespiralis ATCC 25486 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces pristinaespiralis; 2871.4491 4066.9394 3297.1482 3078.4502 4304.8953 4158.0724 3635.8786 3983.3829 3378.6808 4100.1081 3386.2438 4009.4338 9106569 ahpF Stress Oxygen stress Xylella fastidiosa 9a5c superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xylella;species:Xylella fastidiosa; 1729.7978 1965.845 5639.6484 1514.1792 1701.7573 1567.3442 1589.7506 2721.8878 2007.5427 1857.3826 1174.4668 1468.5099 118468101 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 1514.693 1663.4386 1343.5939 1707.6019 1474.6002 2042.9393 1421.8042 1550.8345 1327.5345 1162.6947 1104.1083 3164104 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 2123.2164 2170.9109 1819.6893 2292.9657 2504.9528 1854.0562 1584.5546 1252.1144 1526.5698 1952.543 2806.9386 1591.0299 113733254 vanA Carbon cycling Carbon degradation Others Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 3360.5056 18908.69936 4079.6779 4323.1169 3344.2535 4716.6449 3452.1371 2560.9373 3350.7583 3574.883 4592.2549 3814.7503 4996798 gyrB other category gyrB bacterium rM5 superkingdom:Bacteria; 1842.8575 856.3612 1317.2088 867.241 861.7301 702.3806865 1580.1702 999.5502 37924870 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 760.4292 565.0176 976.5736 871.9981 482.7847717 697.8903 694.7402 674.5953 598.6971 616.5332 696.2438 32140415 ahpC Stress Oxygen stress Cryptococcus neoformans var. grubii superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Tremellomycetes;order:Tremellales;family:Tremellaceae;genus:Filobasidiella;species:Cryptococcus neoformans; 556.312 603.0924 459.5074006 462.7701833 519.0131 528.7316 741.6645 563.7159 370.7584351 77954982 ChrA Metal Resistance Chromium Marinobacter aquaeolei VT8 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter hydrocarbonoclasticus; 2146.0647 5562.5586 5147.952 3174.6616 6646.4169 2512.6863 2959.1123 4493.9896 2736.5798 4699.1658 3812.4643 4338.0352 13421471 pnbA Organic Remediation Aromatics Nitoaromatics Caulobacter crescentus CB15 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter;species:Caulobacter vibrioides; 4807.8625 7270.2012 6892.7194 6949.768 1887.2132 7349.5797 8329.1594 5829.9018 6686.2565 5986.7803 4987.3155 4151.7833 168197840 Arylest Organic Remediation Aromatics Other aromatics Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 4459.16 9934.3509 7145.1685 7835.1349 7179.3694 10140.5427 8543.3926 6482.9999 9633.4723 11616.8483 4056.3861 9999.2783 93357435 sigma_70 Stress Sigma factors Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 2607.6253 1606.5049 1974.0987 3583.5602 3118.9763 1712.9437 1694.1526 1615.8841 1500.4878 1221.9222 2556.9385 1857.1491 29838400 INF1_elicitin_Oomycetes soil_borne_pathogen oomycete elicitor Phytophthora brassicae superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 2282.1473 826.3929 1197.7483 1674.9881 1079.9162 902.7167 1208.962 1487.5425 1149.4704 1640.1169 1068.9507 974.4063 85826777 pimF Organic Remediation Aromatics Aromatic carboxylic acid Roseobacter sp. MED193 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 1235.7579 3072.0389 2165.0893 1295.5119 2475.6844 2718.6045 2163.094 2870.7872 2677.7928 2745.3025 149141115 phdCI Organic Remediation Aromatics Polycyclic aromatics Lentisphaera araneosa HTCC2155 superkingdom:Bacteria;phylum:Lentisphaerae;order:Lentisphaerales;family:Lentisphaeraceae;genus:Lentisphaera;species:Lentisphaera araneosa; 1358.2336 615.9921 841.4146 1072.4614 941.4385 1465.6083 1369.8647 552.8119 1145.7224 781.6885 659.6608 227240255 mgtB soil_borne_pathogen magnesium uptake Sphingobacterium spiritivorum ATCC 33300 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Sphingobacteriaceae;genus:Sphingobacterium;species:Sphingobacterium spiritivorum; 734.4512 877.1465 928.826 813.9891 1648.2472 885.0533 748.2603 741.9435 855.1484 717.4109 1614.4293 1037.3828 13236190 Arylest Organic Remediation Aromatics Other aromatics Photorhabdus luminescens superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Photorhabdus; 402.890647 785.7569 557.8364 497.8631893 662.2644 425.6039091 732.8229 440.0473457 552.3863995 239815062 iro virulence Iron oxidation Variovorax paradoxus S110 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Variovorax;species:Variovorax paradoxus; 23216.5304 23103.4505 24595.5027 20390.0808 17630.2067 29242.3995 15483.1212 22986.2395 28054.9605 20970.6369 17291.372 27517.3057 226363860 akbF Organic Remediation Aromatics BTEX and related aromatics Rhodococcus opacus B4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus opacus; 1140.8722 1242.7304 919.7388 1288.5673 1258.4771 1345.8266 1280.043 909.515 1114.1276 1071.499 1237.6274 1438.7794 127663799 RNA_dependent__RNA_polymerase Bacteria phage REPLICATION Enterobacteria phage MS2 superkingdom:Viruses;family:Leviviridae;genus:Levivirus; 5879.2359 13340.7587 7392.2961 5019.1293 11078.1135 7633.7791 8373.8397 6890.5992 7758.2964 7189.7307 9904.6713 4087.2138 114187675 ChrA Metal Resistance Chromium Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 1720.2877 2625.6927 2769.8883 1220.833 25652.4344 2806.1436 2223.7445 2421.2661 3375.687 2681.5 2478.84 188583335 CopA Metal Resistance Copper Methylobacterium populi BJ001 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 1271.21915 1437.1946 1293.0691 1508.22075 2179.4934 1323.108 1695.2423 934.704 1145.3234 1078.5953 1652.0278 1314.3231 122089662 cydA Stress Oxygen limitation Yersinia enterocolitica subsp. enterocolitica 8081 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia enterocolitica; 4957.149 7204.628 5778.3841 5694.0474 9488.3565 7115.9475 5629.5763 8417.5532 6574.6247 7008.0302 6143.7398 7563.3244 21225304 amyA Carbon cycling Carbon degradation Starch Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 2054.8325 2148.145316 1603.477856 1352.2334 1981.9161 1769.0596 1491.833177 1293.80863 1806.4938 2027.8496 72395481 linC Organic Remediation Pesticides related compound Methanosarcina barkeri str. fusaro superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanosarcinales;family:Methanosarcinaceae;genus:Methanosarcina;species:Methanosarcina barkeri; 2057.3712 1900.9854 2342.6455 2157.7163 2449.8943 2139.7961 2190.3432 5047.179 2117.8465 1766.4765 2801.2447 3699.632 15141372 nmoA Organic Remediation Aromatics Nitoaromatics Sinorhizobium meliloti 1021 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium meliloti; 1982.7414 1343.0016 1810.3113 1911.6814 1574.1913 1745.2642 1322.0814 2246.9403 1490.5513 1607.8012 2216.2937 2346.1443 83593735 rubisco Carbon cycling Carbon fixation Rhodospirillum rubrum ATCC 11170 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum rubrum; 1435.9932 1124.7089 1178.458228 1488.2909 1568.0105 1614.1424 1298.8312 1332.6966 1379.4027 1528.6164 197759676 exochitinase Carbon cycling Carbon degradation Chitin Streptomyces sp. Mg1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 6401.6851 4381.7697 5603.8958 5494.1868 5600.0401 4385.6173 4439.7237 4580.6441 4070.4878 3997.0865 9085.4804 5439.4794 260840386 endochitinase Carbon cycling Carbon degradation Chitin Vibrio sp. RC341 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 662.4272 635.2291 538.3843671 784.85445 1348.94255 783.874 947.80785 568.11717 696.40835 553.0854 1343.4558 915.43955 166859541 iro virulence Iron oxidation Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 3398.0354 1812.2335 3088.7683 3994.7599 2436.9449 2649.641 2467.8309 2039.3157 2910.545 2912.0649 4363.1563 2984.52 91801066 pimF Organic Remediation Aromatics Aromatic carboxylic acid Nitrobacter hamburgensis X14 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter hamburgensis; 2329.3484 2899.0205 2823.0301 3335.2651 3276.4732 3058.0224 2585.5958 2245.2457 2895.879 2897.7495 2669.0373 3508.107 10639938 ferrochelatase Bioleaching Iron oxidation Thermoplasma acidophilum;Thermoplasma acidophilum DSM 1728 3739.4575 2585.834 3447.3847 3558.9457 2786.8811 3436.4315 3957.9512 3818.0023 2527.5979 3947.3623 3638.9586 3045.4641 110338127 Catechol Organic Remediation Aromatics Other aromatics Acidovorax sp. JS42 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax; 1098.8828 535.3925354 1077.7624 720.3676 841.8446 1314.1899 1277.6181 617.6732 799.8639 612.6804081 72120976 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 1118.3596 1240.4878 1261.3004 1046.5731 2134.3697 1402.84 1299.3474 1249.143618 1095.8038 1534.7838 1849.2939 1332.0241 258514380 cap virulence capsule Desulfotomaculum acetoxidans DSM 771 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfotomaculum;species:Desulfotomaculum acetoxidans; 980.101 1192.8179 662.0140161 677.1303 1200.8022 650.0601 957.8214 452.2423289 611.5109 547.3235 790.121084 811.8976 91201982 czcC Metal Resistance "Cadmium,Cobalt,Zinc" Candidatus Kuenenia stuttgartiensis superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;genus:Candidatus Kuenenia; 1704.9212 1579.771 2250.3198 825.9608 1147.5449 1687.9816 1540.4401 2040.5141 1751.4176 1613.887 2128.1844 159892989 sigma_24 Stress Sigma factors Herpetosiphon aurantiacus ATCC 23779 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Herpetosiphonales;family:Herpetosiphonaceae;genus:Herpetosiphon;species:Herpetosiphon aurantiacus; 591.1823 649.488 510.9482683 592.2800866 867.0575 691.1151 533.4803 342.6254312 574.91 651.1603 583.515 66967859 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 721.18 759.22055 608.5182277 510.2046407 687.4159 497.8213833 651.2170667 614.2797 492.0496243 680.32155 799.3188 89572582 mmoX Carbon cycling Methane Methane oxidation Methylomicrobium sp. NI superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae;genus:Methylomicrobium; 1082.6835 682.3766 923.3155 688.15 917.7932 653.2607 574.0161 1766.8486 677.0944 744.59 1808.8124 1244.4392 197087442 sigma_24 Stress Sigma factors Geobacter bemidjiensis Bem superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter bemidjiensis; 1171.73285 1378.2093 1778.5135 1392.06575 2432.6411 1619.06305 1568.2095 1019.561 1132.98715 1287.8322 1796.2235 1632.69385 156532011 tutFDG Organic Remediation Aromatics BTEX and related aromatics Enterobacter sakazakii ATCC BAA-894 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Cronobacter;species:Cronobacter sakazakii; 4112.7814 2582.6611 3586.8766 4354.5938 1647.7732 3229.1373 3036.1463 3695.7854 2953.914 3653.4613 2029.5985 2616.5205 260769642 pstC Stress Phosphate limitation Vibrio furnissii CIP 102972 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio furnissii; 497.3845 539.8366 433.6492891 828.4938 563.3095032 613.4737 546.8347 539.1827 1283.225763 825.2318 160900049 AceA Carbon cycling Carbon degradation Others Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 853.2733 1157.8229 887.3668 828.8715304 747.2968 638.2341 892.6576 310791430 cutinase_fungi Fungi function carbon degradation Glomerella graminicola M1.001 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Glomerellaceae;genus:Glomerella;species:Glomerella graminicola; 5067.1192 1783.8685 3508.9449 5103.9169 2578.895 2746.1539 3649.9182 4522.3015 2550.6278 3862.8546 2824.981 3052.7697 93354836 ZntA Metal Resistance Zinc Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 3349.2762 2747.142 4828.5195 1568.2981 1721.9429 3265.8401 2801.0984 4844.0936 3336.6398 3312.6948 1099.1496 4094.5606 83846425 pimF Organic Remediation Aromatics Aromatic carboxylic acid Sulfitobacter sp. EE-36 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sulfitobacter; 2136.9442 1477.2572 1486.9387 1356.1508 2491.8328 2287.998 1598.7777 1935.2069 2086.2663 2212.7101 1507.664 1755.7494 262080615 fnr Stress Oxygen stress Haliangium ochraceum DSM 14365 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Haliangiaceae;genus:Haliangium;species:Haliangium ochraceum; 5866.2603 4915.4152 6472.6882 8012.4905 2856.8607 7330.9741 6779.7877 6451.1173 5580.7957 7013.5428 4686.9118 4257.7971 260424479 iuc virulence aerobactin Cronobacter turicensis superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Cronobacter; 1142.981 782.6987 498.588 875.9417034 734.7725 617.947 611.2779 665.6901 677.8928 801.8044 239942472 AceA Carbon cycling Carbon degradation Others Streptomyces roseosporus NRRL 15998 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces filamentosus; 4833.9211 5660.7187 4823.8378 3850.7578 9518.9382 5487.0732 5406.7212 6626.3145 6377.6412 6825.0903 4175.404 5759.4431 91777973 tfdA Organic Remediation Aromatics Chlorinated aromatics Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 2375.0182 1051.9999 1612.7779 2382.2324 1223.0607 1564.5025 1126.5713 1288.2698 1402.0543 1816.4687 1346.1466 1622.4358 160917767 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3410.7558 1668.9179 1432.1393 3345.4287 1810.8442 1474.9891 1630.8828 1621.4278 9573.176423 1760.6364 2246.6608 2311.3602 194307053 scaffold Bacteria phage STRUCTURAL Morganella phage MmP1 superkingdom:Viruses;order:Caudovirales;family:Podoviridae;genus:T7-like viruses; 1693.5843 462.3381 459.2892824 487.2323 683.0683 540.5922 724.8924 501.3251672 170747380 cap virulence capsule Methylobacterium radiotolerans JCM 2831 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium radiotolerans; 5135.6105 12617.7165 11721.9514 6507.8174 14630.5048 9522.6386 8226.7226 9317.6995 9483.2593 9018.4825 6080.4349 10296.9681 209516128 phzF soil_benifit Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 800.1217 594.9372 1141.0879 646.4948086 606.6833 805.7737699 431.6836769 626.6345 118681426 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Geobacter lovleyi SZ superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter lovleyi; 8352.6323 2895.0703 5147.1233 6439.6037 6288.6315 3642.0206 4505.3219 3250.9534 4986.6456 6206.737 8406.6652 4835.8877 197777854 pcc Carbon cycling Carbon fixation Streptomyces pristinaespiralis ATCC 25486 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces pristinaespiralis; 1449.6941 666.9708 768.4118 1368.0266 977.402 784.5769 1315.7498 1372.2977 683.2334 1040.1994 825.7015184 742.6729 116627463 hly virulence hemolysin Streptococcus thermophilus LMD-9 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus;species:Streptococcus thermophilus; 1740.181 1063.74215 1564.4196 1644.9632 1239.9157 1550.8773 1221.56775 1398.41265 938.78195 1089.66685 1806.0736 1023.6161 184194703 amyA Carbon cycling Carbon degradation Starch Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 807.4087 1690.26175 1017.4296 1188.32875 981.62995 2364.29 1502.52525 1267.0268 1697.2384 1659.35675 1443.5376 85773383 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Anaeromyxobacter dehalogenans 2CP-C superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter;species:Anaeromyxobacter dehalogenans; 2552.9559 3932.2124 5620.2527 2120.0755 2657.6719 4368.7466 3245.1453 4871.8608 4021.539 3761.6865 1747.886 4845.8162 257484966 glnA Stress Nitrogen limitation Pseudomonas syringae pv. tabaci ATCC 11528 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas amygdali; 2261.1661 1405.4274 1600.2885 2276.4191 25729.03079 1933.9078 2646.2503 2583.9354 1428.1712 2089.2427 1457.1883 1697.332 261252151 pstS Stress Phosphate limitation Vibrio orientalis CIP 102891 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio orientalis; 489.6475 546.6301 669.238 767.1573 431.2763603 442.3379 366.0594323 514.3471 673.9511 725.5189314 513.121215 134100738 P450 Energy process Energy process Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 1948.3547 1291.7638 1260.810143 1954.2396 1125.5518 1372.9274 1276.8543 1340.3908 1443.3498 1633.2496 1311.8154 1470.8993 91719648 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Psychrobacter sp. PRwf-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Psychrobacter; 3136.4414 3662.0575 2959.963 3832.8825 2596.8307 3452.1655 2706.2396 2374.8704 3240.9671 2750.732 2993.2734 3369.9458 87283807 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 15111.7374 12353.5505 15211.9513 14312.4479 7306.8154 18641.0685 20500.1529 11434.2768 13854.8605 16611.0429 15456.1806 11805.2194 258585500 pstS Stress Phosphate limitation Vibrio mimicus VM573 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio mimicus; 2597.2287 1039.9709 1993.3053 2774.9953 2066.9686 1208.5279 1592.3199 2029.4144 2211.0613 2345.1107 2168.0042 1377.6567 210632294 cellobiase Carbon cycling Carbon degradation Cellulose Collinsella stercoris DSM 13279 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Coriobacteriales;family:Coriobacteriaceae;genus:Collinsella;species:Collinsella stercoris; 946.8695 753.4036 1246.441 1367.3143 575.800091 866.5972 853.752 824.2041 896.6303 925.3972 700.2210263 934.3215 220919487 glnA Stress Nitrogen limitation Anaeromyxobacter dehalogenans 2CP-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter;species:Anaeromyxobacter dehalogenans; 1548.6364 1633.4044 2191.5221 1500.194 1050.5858 2139.6465 1483.3642 2097.0773 2434.3947 1590.0019 2463.5009 20502007 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1232.279 1597.789 1854.9185 1310.248473 926.6456848 1967.6791 1383.0571 1375.699 1935.296 1861.0117 1171.271382 1984.8874 149825491 gyrB other category gyrB Limnobacter sp. MED105 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Limnobacter; 1960.6184 1341.4343 1296.137 1508.3714 897.7512 1195.4615 1536.1411 867.0303 1212.9779 1136.1321 302674337 calcineurin_A_fungi Fungi function virulence Schizophyllum commune H4-8 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Schizophyllaceae;genus:Schizophyllum;species:Schizophyllum commune; 1479.8496 3745.3938 2108.996 1612.2124 3097.5331 2770.6523 2771.207 996.1695 3151.876 2790.9201 1130.0212 3352.5332 56963307 obgE Stress Radiation stress Bacillus clausii KSM-K16 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus clausii; 1510.932 1612.2008 1951.0536 1353.6716 1692.9349 1327.6846 1500.4893 2531.306 1473.1012 1658.7649 2045.743 1745.56 224372362 pstB Stress Phosphate limitation Nautilia profundicola AmH superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Nautiliales;family:Nautiliaceae;genus:Nautilia;species:Nautilia profundicola; 8930.380002 1711.7584 1057.8348 1754.1324 1618.6324 1704.7027 1652.2978 1446.7148 1490.7144 1446.982 2087.714 1593.3781 117994779 CadA Metal Resistance Cadmium Chloroflexus aggregans DSM 9485 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aggregans; 650.3015568 621.2505 505.2778505 556.1049777 581.5637798 441.5213425 422.2087128 555.2835 359.2404916 485.9972754 1089.539689 479.75172 91802339 rubisco Carbon cycling Carbon fixation Nitrobacter hamburgensis X14 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter hamburgensis; 7773.8346 19428.7652 11873.9908 11817.5944 22869.08464 10830.4613 16838.7071 6517.6545 15656.6714 9872.3474 10955.988 7856.3178 147886024 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured bacterium superkingdom:Bacteria; 1007.5432 16730.58348 1540.2986 1120.7726 1099.4218 1753.3046 1276.9886 1056.3721 1026.2302 886.5318086 1382.0922 260853048 sigma_24 Stress Sigma factors Prevotella tannerae ATCC 51259 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Prevotellaceae;genus:Prevotella;species:Prevotella tannerae; 807.1736 663.7215 732.3684 713.12055 795.58 604.9669 668.4046 1141.9776 603.42075 730.2244 909.2592 532.4013677 240011733 P450 Energy process Energy process Methylobacterium extorquens AM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 1326.8961 834.8667 1326.8298 1236.1194 602.7794631 858.8648 755.1998 871.205 921.6871 794.4482 968.2267 256585991 katE Stress Oxygen stress Saccharomonospora viridis DSM 43017 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharomonospora;species:Saccharomonospora viridis; 4079.5902 6852.4875 6144.2121 6363.8975 15138.7342 5593.0534 10244.9435 4990.2284 5992.3643 4778.0679 6531.1605 4238.3795 6119631 alkB Organic Remediation Other Hydrocarbons Pseudomonas chlororaphis superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas chlororaphis; 6703.1865 3354.9491 3620.6518 5370.1146 2777.8184 3837.6489 6294.9412 5775.941 3636.2038 4572.9626 3239.6938 3303.7284 218297234 oxyR Stress Oxygen stress Thermus aquaticus Y51MC23 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Thermus;species:Thermus aquaticus; 5060.9135 9280.6069 7026.25 4860.9091 12400.2757 6823.911 7657.1225 6835.5369 6360.5289 7080.2772 8657.6262 5514.5267 226906981 SMR_antibiotics Antibiotic resistance transporter Citrobacter sp. 30_2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter; 402.8100528 464.3897 542.7171479 565.9406 564.2666986 829.871 321.4670459 646.3029 654.7184317 431.745 226831452 sigma_24 Stress Sigma factors Actinomyces coleocanis DSM 15436 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Actinomyces;species:Actinomyces coleocanis; 1215.596 1831.2708 1521.6444 957.9912 1606.8396 1550.2492 1273.5394 1307.2251 1155.9356 1208.1763 1120.867769 1387.9971 225046887 pstS Stress Phosphate limitation Clostridium asparagiforme DSM 15981 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium asparagiforme; 505.417 813.2554 667.7259 406.8432732 621.4177 584.8314439 487.0488 579.1845307 424.0912 517.3974 758.0001922 782.0298 302675657 p450aro Fungi function organic remediation Schizophyllum commune H4-8 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Schizophyllaceae;genus:Schizophyllum;species:Schizophyllum commune; 12726.336 3910.7539 8369.335 10092.3363 5786.583 5217.8301 7583.1625 7702.3844 5693.4642 9019.0855 6482.8951 5559.2667 29605347 pcaG Organic Remediation Aromatics Other aromatics Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 2955.3875 3633.0936 4482.8869 4242.233 1676.1746 4964.9791 4522.3896 2558.4196 4395.4466 3714.3296 3272.7276 2435.1024 83972354 nosZ Nitrogen Denitrification uncultured alpha proteobacterium superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 899.9908 806.0719 528.7906434 1329.5256 456.4855262 255955931 nitrate_reductase_fungi Fungi function nitrogen Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 11121.284 7235.8982 11432.0631 11006.29 8644.9415 8788.7934 10034.4534 8514.7384 10673.1515 8855.9548 10923.4346 8592.097 1255468 nifH Nitrogen Nitrogen fixation unidentified bacterium superkingdom:Bacteria; 554.136 592.5416 440.5192785 598.8491 752.9625371 585.6736 622.0271 260939328 sigma_70 Stress Sigma factors Vibrio orientalis CIP 102891 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio orientalis; 826.9997 592.8219 575.1693856 748.241 872.2507 783.2101 499.4465 503.9213 797.0835 389.1597204 90422541 bco Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris BisB18 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 2645.3835 2055.3105 2655.2299 3072.6151 1848.3651 3293.6737 2692.6818 3113.6304 18132.14515 2314.336 2833.4377 2873.5901 220713539 TehB Metal Resistance Tellurium Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 25944.5181 25518.0033 24158.0338 30382.3978 35396.40528 26878.4236 33279.8332 28736.1724 22597.3988 36518.8162 17538.9455 18029.7772 154253826 CopA Metal Resistance Copper Parvibaculum lavamentivorans DS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Parvibaculum;species:Parvibaculum lavamentivorans; 2817.693 1958.5435 1222.9016 2813.0881 2755.0987 1783.3728 2444.4546 1523.4558 1497.4591 1746.3545 1974.1737 2651.744 110630946 nifH Nitrogen Nitrogen fixation uncultured soil bacterium superkingdom:Bacteria; 1232.0506 1812.4246 1286.032 995.1784785 2039.6289 1247.1301 3329.5892 1271.3602 1613.832 1162.6172 1327.407265 163751338 pimF Organic Remediation Aromatics Aromatic carboxylic acid Shewanella benthica KT99 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella benthica; 1231.5536 477.5581381 1352.8991 1161.0296 776.695 501.0208529 1154.7597 840.4125 681.1423 978.7182 221738326 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Agrobacterium vitis S4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium vitis; 1817.4973 1922.0361 2558.9785 1004.4737 1751.1596 2328.2154 1296.15295 2380.7409 2466.0565 2092.4028 1442.0288 2185.0913 239821631 katE Stress Oxygen stress Ochrobactrum intermedium LMG 3301 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum;species:Ochrobactrum intermedium; 1789.58185 1088.6092 2006.8852 1581.828891 1309.2734 1188.7744 1564.9735 898.0806 1856.9471 1491.9039 1071.3292 239933495 ureC Nitrogen Ammonification Streptomyces ghanaensis ATCC 14672 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces ghanaensis; 12290.65275 11648.1609 12102.82775 12241.80675 19215.47985 12391.1125 14712.1957 11339.36725 11428.50355 11346.05635 14182.6003 11113.3974 171098043 type_III_secretion virulence secretion Burkholderia ambifaria MEX-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ambifaria; 1626.1676 1169.9577 1308.8009 1500.9885 1855.001 1152.2324 1194.3489 1280.3052 977.0196 1185.5048 2130.1655 2078.899 134298058 clpC Stress Protein stress Desulfotomaculum reducens MI-1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfotomaculum;species:Desulfotomaculum reducens; 1320.1127 1127.8691 1376.3368 1407.8727 1692.8401 1363.3703 939.5378 1345.9951 1135.1306 1046.2852 2340.4769 1678.6423 84779127 SMR_antibiotics Antibiotic resistance transporter Sodalis glossinidius str. 'morsitans' superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Sodalis;species:Sodalis glossinidius; 4568.1497 1746.7431 2754.7382 3726.10345 2369.46795 2155.506865 3127.314124 2288.2038 2530.159008 2665.71625 3284.6558 2413.1238 218392712 glnA Stress Nitrogen limitation Pseudomonas syringae pv. tomato str. DC3000 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 395.9461093 385.0172662 639.924 530.6029 461.755 46850304 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 6240.3901 2331.3779 3677.2104 6209.7455 3139.9456 3791.4788 3670.7252 4793.1104 3054.7938 3924.7167 3802.6863 3723.9245 160362131 pcc Carbon cycling Carbon fixation Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 3692.4579 1806.3719 2622.6324 3163.5119 2748.3932 2301.6531 1798.9332 2483.1794 2314.0962 2353.9099 4619.2105 2805.0519 156033332 cutinase_fungi Fungi function carbon degradation Sclerotinia sclerotiorum 1980 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Sclerotinia;species:Sclerotinia sclerotiorum; 892.0657 567.6554 594.3179505 849.1233 870.072 684.6989 533.205 712.7722 538.7517 593.1618 768.5229675 867.5549 260778175 proV Stress Osmotic stress Vibrio coralliilyticus ATCC BAA-450 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio coralliilyticus; 1193.1372 732.5014382 1140.5536 187948708 katE Stress Oxygen stress Psychrobacter sp. T-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Psychrobacter; 5499.8541 2445.3473 4976.328 2247.6406 3374.6646 2520.8823 3133.2533 6277.4815 3287.027 2624.0151 3634.7784 4354.7062 3157534 nifH Nitrogen Nitrogen fixation unidentified nitrogen-fixing bacteria superkingdom:Bacteria; 6045.543645 5820.28742 5214.429218 5583.069636 5702.292345 5947.959791 5640.158073 6875.778082 3936.690264 6922.186645 5620.98842 6010.504155 84780811 igaA soil_borne_pathogen regulation Sodalis glossinidius str. 'morsitans' superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Sodalis;species:Sodalis glossinidius; 4128.6181 5844.0289 4548.111 4728.276 7450.4718 5566.2966 4845.5174 3319.161 4898.7738 5628.4266 3881.1987 5848.4837 256585355 cap virulence capsule Saccharomonospora viridis DSM 43017 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharomonospora;species:Saccharomonospora viridis; 2484.5049 1489.8978 2700.6367 2330.5243 1548.2926 2113.3235 2695.0103 2244.7737 2004.0364 2387.0296 1932.1067 2664.7348 223893343 mannanase Carbon cycling Carbon degradation Hemicellulose bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3;genus:Pedosphaera;species:Pedosphaera parvula; 1390.3972 2854.154 1765.20985 1769.23395 1594.6297 2108.933325 1955.5706 1948.8121 2158.49155 2156.2191 1577.3113 3272.5834 115254579 phn Organic Remediation Herbicides related compound Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 5885.4551 4006.2466 4797.0561 5609.7802 4355.9912 5225.4877 11127.06751 2629.6613 4000.8621 4409.3964 5367.3126 3786.8324 73538609 proO Organic Remediation Aromatics Other aromatics Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 3189.2975 888.6913 1555.9867 3320.2937 1736.5039 1705.0916 1783.7351 2000.3884 1536.2268 1823.2579 1723.2608 2010.7042 29466064 norB Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 9831.2596 8454.3541 5672.8129 8106.7294 5892.8322 8349.9011 6892.1042 5289.1677 7237.6705 7483.4307 3793.7492 5250.0691 197210159 CODH Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 730.9722 1266.842514 1055.8138 357.08024 1704.4243 1185.6747 868.3421 1345.2567 1146.6398 835.6859 516.1972508 224535152 pstS Stress Phosphate limitation Bacteroides cellulosilyticus DSM 14838 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides cellulosilyticus; 939.7504 613.4903 695.6708 778.0331 810.1672 1203.0319 1164.6731 704.085 1215.3787 657.9855 88857853 hrcA Stress Heat shock Pseudoalteromonas tunicata D2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Pseudoalteromonadaceae;genus:Pseudoalteromonas;species:Pseudoalteromonas tunicata; 1254.4154 626.5275176 981.5509 1118.8949 1370.1072 1187.647 1330.9492 1069.6789 827.810659 33320489 dsrB Sulphur sulfite reductase Desulfospira joergensenii superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfospira; 3529.7525 7744.4494 9090.5128 3632.159 3545.8692 5687.6071 5419.6367 7543.6126 6381.9513 6624.5744 3831.1795 10036.1084 225181810 katE Stress Oxygen stress Dethiobacter alkaliphilus AHT 1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Syntrophomonadaceae;genus:Dethiobacter;species:Dethiobacter alkaliphilus; 626.1197 508.9256 474.687012 585.0712877 405.4619964 557.7054 676.0636688 457.477 579.2819 420.0436687 115389770 Cyanide_hydratase_Fungi soil_borne_pathogen fungi virulence Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 1278.6271 2432.9998 2156.24205 1480.53805 2034.9175 1948.34815 1887.7758 2592.3902 1736.16915 2510.966 1372.5496 2083.108 46519999 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1627.4974 948.6323 1241.1777 1287.7317 1740.7923 1952.7948 1084.4339 1423.9776 1856.2882 1257.7841 972.0168 187728242 ChrA Metal Resistance Chromium Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 1695.4514 4064.5183 2362.4192 2006.1669 4947.1875 2403.8643 2464.6422 2583.4633 2994.5804 2688.4791 1417.9081 2460.6446 116198749 endoglucanase Carbon cycling Carbon degradation Cellulose Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 2754.4806 3964.104132 5117.39 3344.5794 4965.436827 2096.213096 3131.831513 1919.966108 2179.620246 1842.402349 6002.5712 1775.545516 315602225 sid_bac soil_benifit Rhodopseudomonas palustris DX-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1851.5482 2316.8132 1925.0279 1379.9845 2761.153 2168.7066 1293.1993 2043.758 2098.2996 1719.3094 1221.579 1387.3517 90104153 ArsC Metal Resistance Arsenic Rhodopseudomonas palustris BisB18 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 6778.4879 3730.4213 5246.1226 6510.9678 3763.3351 4558.4223 3661.0214 4275.1322 4933.4061 5617.115 4329.8101 4670.4541 79075659 aoxB Metal Resistance Arsenic Agrobacterium tumefaciens superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium; 2462.5901 2139.040738 2950.8613 2437.7485 2328.1551 2084.741707 1658.427198 1483.04575 1894.787116 1986.996672 1779.3582 2153.122039 229323536 phoA Stress Phosphate limitation Rhodococcus erythropolis SK121 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus erythropolis; 4067.9981 1990.3744 1818.9042 3319.1568 2397.8504 2691.1297 4221.8582 3717.3916 2387.3447 2451.0915 2217.7111 2435.6929 118171854 gyrB other category gyrB Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 5840.0405 2778.0045 3559.6441 4214.838 2885.3948 60066.3366 2615.8084 2162.973 2822.9217 2845.6245 6333.5582 3157.8909 146193640 exaA Organic Remediation Chlorinated solvents Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 4917.1611 4640.7239 4205.7788 5724.223 2489.8989 4071.5353 3299.5716 3427.9421 3229.4812 3717.1882 3305.5692 3890.2645 282564745 sigma_24 Stress Sigma factors Streptomyces sp. ACTE superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 3290.24125 4789.040101 4356.7856 4735.994302 4258.04625 6090.649397 4224.065748 4639.018338 5146.024812 5042.907073 4985.0572 6651.494761 118736482 pcc Carbon cycling Carbon fixation Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 1265.2149 1127.1555 947.5674 6844.277594 918.0001517 1206.9724 884.584 918.2543 880.9858 949.9969 1034.138958 1213.1294 84689354 ZitB Metal Resistance Zinc Parvularcula bermudensis HTCC2503 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Parvularculales;family:Parvularculaceae;genus:Parvularcula;species:Parvularcula bermudensis; 774.9092 1039.82435 1009.36015 905.7009 1252.7324 903.12045 805.4623 1013.5936 955.6671 949.59485 960.6478 1265.7792 119715741 atzD Organic Remediation Herbicides related compound Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 3647.903 4656.958 5545.9705 3031.7417 3050.6082 5086.5737 4020.8768 4600.7977 5429.0101 4609.9347 2307.9476 5096.1844 91692354 sigma_70 Stress Sigma factors Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 3430.40055 3252.8558 2770.2736 2967.24685 2601.381 3783.053154 2662.53805 2854.2601 3500.95385 3691.0699 2463.98735 3707.68605 209517820 xylA Carbon cycling Carbon degradation Hemicellulose Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 5100.203 9682.0993 6923.1505 12111.4885 8033.25 11709.3227 5201.4156 5548.3928 13261.1258 7391.9774 11301.3657 10167.939 78224126 cytochrome Energy process Energy process Geobacter metallireducens GS-15 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter metallireducens; 1013.6683 829.0153 728.7856 606.283 1011.8691 434.7757671 417.9276603 489.1463 648.2333393 283818490 cat_bac soil_benifit Spirosoma linguale DSM 74 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Spirosoma;species:Spirosoma linguale; 526.8819 640.186 380.9793829 578.0492 636.4894585 532.8776 1014.2319 454.9633 461.9852 354.0545369 358.7426704 6460232 ChrA Metal Resistance Chromium Deinococcus radiodurans R1 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus radiodurans; 5799.2466 18592.3183 7185.0648 5355.0063 16898.7099 6976.9139 12243.7683 6200.9825 8102.7904 6809.9263 10781.6414 4224.1803 111918994 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria; 1368.9257 868.0611 1202.3718 663.9246 653.9636 1246.2075 667.2511 445.7757331 831.2877 251808181 sigma_24 Stress Sigma factors Gallionella ferruginea ES-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Gallionellales;family:Gallionellaceae;genus:Gallionella;species:Gallionella capsiferriformans; 9811.449756 12047.38331 12762.80933 12513.58108 12172.5527 13366.89749 10509.10928 9951.625008 10052.787 10484.60147 20739.4552 8418.869557 72117894 pilin virulence pilin Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 1548.3812 1956.5174 1300.10385 1410.56425 2012.28925 1794.4554 1586.4529 1695.376142 1397.35395 1741.06725 2611.4984 1678.567995 14585932 Catechol Organic Remediation Aromatics Other aromatics marine bacterium SE165 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales; 1534.6534 1811.4179 2117.7779 1530.6299 3310.5435 1733.0449 1959.0116 1106.6573 1863.0843 1510.5638 3174.7552 1843.1696 57020411 CopA Metal Resistance Copper Campylobacter coli RM2228 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Campylobacteraceae;genus:Campylobacter;species:Campylobacter coli; 5351.4541 4357.75 2373.5129 5318.1325 2095.4837 4435.6013 6216.5652 7024.4362 4115.7905 5189.0938 3168.5569 2569.9678 121601888 pnbA Organic Remediation Aromatics Nitoaromatics Bartonella bacilliformis KC583 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bartonellaceae;genus:Bartonella;species:Bartonella bacilliformis; 625.1391 1009.3378 811.1143 936.2121 1016.9137 1361.4111 1075.0815 601.3887 948.503 1469.7839 1259.0229 120603427 TerC Metal Resistance Tellurium Desulfovibrio vulgaris subsp. vulgaris DP4 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 4645.3854 1007.4392 2400.7308 4259.3823 1597.6063 1453.7961 2047.0801 1497.7101 1394.6107 2374.0542 1544.9262 1982.1684 27382914 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 1174.9365 1162.0573 1385.2059 1187.6987 1153.2327 1288.1701 894.4598 928.083 971.5679 977.3435 1619.0901 1433.4787 260772260 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Vibrio metschnikovii CIP 69.14 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio metschnikovii; 2011.1104 666.7797 1232.6285 1569.0926 1446.0248 722.972 1136.4013 477.5525026 1232.2944 1538.7144 2265.8324 1107.047 116668957 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 1851.6556 1461.2653 1846.6746 2264.2146 1060.6343 2205.7683 1787.2335 2046.1304 1797.0232 2007.281 1254.6128 1693.4732 126630999 fnr Stress Oxygen stress Marinobacter sp. ELB17 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter; 6744.84 5912.4947 5677.4801 7676.9285 2830.4122 6490.4905 4184.8323 4632.4261 5530.88 4889.9669 4864.8861 5066.2204 31747783 nif_II Bioleaching Nitrogen Leptospirillum ferrooxidans 1994.4947 967.2619 1331.1044 1544.3137 1682.6019 977.887 793.4989 1052.2486 1082.6055 1326.3062 2112.2191 1392.7348 156231487 CadA Metal Resistance Cadmium Roseiflexus castenholzii DSM 13941 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus;species:Roseiflexus castenholzii; 8408.098733 6997.166467 7166.4252 7165.143333 5618.5004 6076.3858 5484.554333 6105.935733 6815.874233 5813.1755 7544.9267 6256.508367 182434113 sigma_24 Stress Sigma factors Streptomyces griseus subsp. griseus NBRC 13350 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces griseus; 2359.3562 2492.4948 3129.6824 2092.612 1674.127 2824.839 2345.6271 2585.0369 3250.1697 2795.8221 2007.8803 2990.315 114316760 exaA Organic Remediation Chlorinated solvents Granulibacter bethesdensis CGDNIH1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Granulibacter;species:Granulibacter bethesdensis; 2324.0964 1087.3095 1265.8949 1981.5935 1017.217 833.3644 1176.5471 1039.1276 944.6006 1307.4126 1960.2635 1311.8101 197087594 pstC Stress Phosphate limitation Geobacter bemidjiensis Bem superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter bemidjiensis; 707.6134 384.3928794 458.2715403 421.7343184 405.6675 446.7348544 324.4299529 109643167 Ni_Fe_hydrogenase Energy process Energy process Desulfitobacterium hafniense DCB-2 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium;species:Desulfitobacterium hafniense; 1513.4707 1893.926 1901.6048 1417.1048 2079.7852 1741.0914 1345.6527 1690.6037 1681.5939 1763.2271 2482.6304 1716.4749 71018323 tre_fun soil_benifit Ustilago maydis 521 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Ustilaginomycetes;order:Ustilaginales;family:Ustilaginaceae;genus:Ustilago;species:Ustilago maydis; 911.3060298 1726.2212 1611.87645 783.9492644 919.3712423 1378.079 1101.3275 914.2726 1087.4 2458.2552 47156902 phospholipase_D_fungi Fungi function carbon degradation Antonospora locustae superkingdom:Eukaryota;kingdom:Fungi;phylum:Microsporidia;genus:Antonospora; 878.6603 458.3763396 621.5068772 840.4801 555.8177 1003.9558 995.891 1043.9451 730.8776 948.5899 622.3013165 573.4217 145213675 nagI Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 3271.4629 2885.5771 3553.1159 3395.7123 4452.0402 2890.6915 3022.382 2822.8979 2494.1654 2779.1358 5708.2698 3172.2412 83701112 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 866.2354 836.7955 746.1383 675.3337 389.2014678 558.0991 462.7099326 94309217 sigma_32 Stress Sigma factors Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 2243.3951 1843.4782 1161.545 2027.2748 1303.0889 1154.087 904.611 1127.8277 1229.9762 915.8275 2926.0526 865.1929 167592805 sigma_70 Stress Sigma factors Heliobacterium modesticaldum Ice1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Heliobacteriaceae;genus:Heliobacterium;species:Heliobacterium modesticaldum; 460.1662928 938.0432 1102.82 591.1578 982.8434 856.8906 1205.2227 571.1038 845.5031 768.2294 788.9646 254514331 ureC Nitrogen Ammonification gamma proteobacterium NOR5-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 538.1546604 654.7762 688.4592 466.1242559 509.0487 708.7294 476.7211 441.1863233 671.5118 227295544 nplT Carbon cycling Carbon degradation Starch Geobacillus kaustophilus HTA426 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus;species:Geobacillus kaustophilus; 1096.062 450.0699686 442.1131384 118001378 ArsC Metal Resistance Arsenic Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 887.9336978 572.1548989 730.9136 666.8212138 563.3029 683.9435938 776.9375 735.5229 822.1008 149240714 vacuolar_iron_transport Fungi function iron Lodderomyces elongisporus NRRL YB-4239 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Debaryomycetaceae;genus:Lodderomyces;species:Lodderomyces elongisporus; 899.7893 470.0474 528.7301172 668.494 711.2859 725.0808 513.2927 576.8654 457.4057895 579.9407 570.7419563 114769265 glnA Stress Nitrogen limitation alpha proteobacterium HTCC2255 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales; 735.9824 1415.8848 1043.717 589.9798 1529.6743 1085.8415 973.2832 701.6847 804.7085 786.3079 934.5571 726.606 46520025 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 14655.8855 6223.4512 7710.958 15999.0104 8015.3333 4003.3645 9913.4883 6022.8923 4611.1965 6546.934 8476.4567 6072.3209 167594197 pmoA Carbon cycling Methane Methane oxidation uncultured bacterium superkingdom:Bacteria; 711.6431 513.6397 446.2182675 820.3722 45270.36251 679.3128 579.6252 369.4565787 454.8095 837.0278 119715160 pstC Stress Phosphate limitation Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 1168.6233 783.2339 1120.1365 1385.7238 1383.7238 997.6891 919.9352 1035.9516 1253.6796 1162.0039 110819505 xylC Organic Remediation Aromatics BTEX and related aromatics Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 3262.38265 2835.7537 3327.94285 2944.70075 2266.6883 2923.543 2990.11055 2413.943 2564.82785 2605.021 3315.2752 2456.25025 153813552 ChrA Metal Resistance Chromium Ruminococcus obeum ATCC 29174 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Ruminococcus;species:Ruminococcus obeum; 698.3183 660.8544 779.9707 755.6103 699.9279539 916.8204 1162.3585 514.2528597 684.2469 705.2618 1036.1571 731.1652 149816303 linB Organic Remediation Pesticides related compound Plesiocystis pacifica SIR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Nannocystaceae;genus:Plesiocystis;species:Plesiocystis pacifica; 2466.8817 2294.8832 883.2156 2553.1228 1577.3386 1158.7833 1183.4981 1410.8982 1446.7513 1281.3278 2938.7135 1198.628 118073386 CopA Metal Resistance Copper Shewanella woodyi ATCC 51908 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella woodyi; 1154.291 851.3556 1129.9943 819.6325 1128.5095 973.5197 978.7431 1633.4958 800.5848 1022.2103 1697.122 809.7142 126668688 merB Metal Resistance Mercury Marinobacter sp. ELB17 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter; 551.8422502 1666.7262 1844.6682 876.7375 797.5504323 521.5219407 1291.4673 1407.8721 1033.7383 1415.0683 1178.8397 171853191 ppx Phosphorus Phosphorus utilization Sinorhizobium meliloti superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium; 4125.2734 3307.758961 4744.5104 3771.5313 3159.155544 12504.04565 3251.393636 3987.68 4989.393675 3141.238806 3776.8599 4679.7097 119478394 limEH Carbon cycling Carbon degradation Others marine gamma proteobacterium HTCC2143 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 691.0514 843.5062 573.5409579 788.4158 2040.5263 747.62 860.5997 518.5349 947.3032 871.1617 257443812 grpE Stress Heat shock Campylobacter gracilis RM3268 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Campylobacteraceae;genus:Campylobacter;species:Campylobacter gracilis; 382.8764087 503.2035 456.2214662 465.0850615 578.5302594 505.1000568 502.1322 354.9355444 548.3542 480.8273 501.5375745 46111009 pec_CDeg Fungi function carbon degradation Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 1415.1731 801.1646725 967.2247 1278.5133 1356.2212 1801.491 820.2574407 1169.2836 685.6950605 69288104 amyA Carbon cycling Carbon degradation Starch Kineococcus radiotolerans SRS30216 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Kineosporiaceae;genus:Kineococcus;species:Kineococcus radiotolerans; 653.3872 488.3086764 609.7316 441.3772183 667.6361 588.4855 546.1487 534.2923 595.7140111 192811064 CopA Metal Resistance Copper Geobacillus sp. Y412MC10 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 619.9981195 880.2557 511.3423 619.8438575 1125.025808 1057.7467 280966393 sigma_24 Stress Sigma factors Frankia sp. EuI1c superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 5088.92655 3361.3969 3177.46645 4823.871 3661.36125 3333.40505 2827.56595 3774.774557 3380.731 3474.1951 5429.00785 3660.4605 261412766 sigma_24 Stress Sigma factors Aggregatibacter actinomycetemcomitans D11S-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Aggregatibacter;species:Aggregatibacter actinomycetemcomitans; 8415.4417 8093.2938 5084.0655 5833.6252 5687.2729 5022.3963 3898.7074 4935.0087 4657.7457 4485.5963 12916.5398 3147.7152 229557387 vip virulence virulence protein Listeria grayi DSM 20601 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Listeriaceae;genus:Listeria;species:Listeria grayi; 1182.7675 457.2549919 955.2243 644.205976 695.5087 681.64 415.2717106 384.0587802 774.4089948 631.4112687 116255210 CopA Metal Resistance Copper Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 2750.3569 2978.0626 2624.9733 2764.0509 2636.2286 3279.196 2300.3312 2252.2783 2236.7356 2471.6489 3578.729 2750.8641 115523349 BchY other category chlorophyllide reductase Rhodopseudomonas palustris BisA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 899.0819 623.404 781.8172 770.54745 680.2859093 1145.7713 943.5868 518.0992 737.2728 638.8326 825.3411493 596.1899 157420104 endochitinase Carbon cycling Carbon degradation Chitin Chaetomium cupreum superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium; 1650.8025 1126.84965 1117.7666 1433.9939 1035.5319 992.3048 923.4164 1174.67125 1167.33405 1294.5879 1006.2705 1269.66545 256676491 hrcA Stress Heat shock Streptomyces sp. SPB78 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 6852.6074 2257.6495 3790.0659 5734.8112 3261.078 2716.4358 3129.1355 2547.441 3566.3452 3626.7623 4220.282 4142.5415 119817895 nitA Organic Remediation Aromatics Other aromatics Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 2164.5072 714.171031 1447.6239 1491.1537 907.9342 998.1677 959.0487 740.6967 1149.6335 1482.9603 1571.8818 981.2587 229311120 grpE Stress Heat shock Listeria grayi DSM 20601 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Listeriaceae;genus:Listeria;species:Listeria grayi; 414.4021922 406.2781703 474.9061721 651.3359 337.1308754 548.0855 213402933 CysJ Sulphur sulfite reductase Schizosaccharomyces japonicus yFS275 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Schizosaccharomycetes;order:Schizosaccharomycetales;family:Schizosaccharomycetaceae;genus:Schizosaccharomyces;species:Schizosaccharomyces japonicus; 374.96474 915.6545 524.7462851 591.8974 713.056 878.4589 669.942 686.1783 556.5446 3212093 katE Stress Oxygen stress endosymbiont of Onchocerca volvulus superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rickettsiales;family:Rickettsiaceae;genus:Wolbachia; 3134.9907 4372.3148 2343.8814 2375.9864 5545.0006 3594.0408 4039.7339 5289.3855 2744.338 3597.8077 2445.2962 3230.2192 154157849 CadA Metal Resistance Cadmium Parvibaculum lavamentivorans DS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Parvibaculum;species:Parvibaculum lavamentivorans; 1025.3007 1656.8253 874.0149466 1290.0877 1074.873 1783.6271 1182.007 793.0114 1116.0263 1456.2502 881.1022487 1662.5205 90338124 pstB Stress Phosphate limitation Aurantimonas manganoxydans SI85-9A1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Aurantimonas;species:Aurantimonas manganoxydans; 2179.5246 1755.3125 2372.3933 2897.5059 1370.8313 2461.2965 3450.3706 10850.1246 1676.1887 2158.3407 2693.0379 4498.3741 218713820 MFS_antibiotic Antibiotic resistance transporter Talaromyces stipitatus ATCC 10500 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus; 833.7293 899.7361 647.1186 507.02 550.5829362 26278842 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2522.7802 2615.86185 2573.21995 2572.3746 3199.81975 3092.893 2394.634213 2283.8886 3135.74805 2874.13805 1983.2791 2698.86655 1595855 amyA_fungi Fungi function carbon degradation Cryptococcus sp. S-2 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Tremellomycetes;genus:Cryptococcus; 1676.96855 1442.0877 1548.49885 1626.63585 960.0445 1720.4068 1001.09855 2085.1425 1028.126274 1116.79015 990.4143 1564.8286 108803705 sigma_24 Stress Sigma factors Rubrobacter xylanophilus DSM 9941 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Rubrobacterales;family:Rubrobacteraceae;genus:Rubrobacter;species:Rubrobacter xylanophilus; 971.1014 1985.838 1164.5983 1302.8675 834.4835432 2273.6698 1618.2082 1369.8526 1760.2475 1834.067 1668.9747 119864834 pstB Stress Phosphate limitation Psychromonas ingrahamii 37 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Psychromonadaceae;genus:Psychromonas;species:Psychromonas ingrahamii; 494.6337663 580.7037 558.9677561 403.0390955 510.875749 467.565 113526540 xylC Organic Remediation Aromatics BTEX and related aromatics Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 2348.75135 2323.1908 2889.81 2119.52075 2350.9824 2315.28575 1975.11775 2863.7801 2263.2136 2654.2818 2802.8544 2491.63165 161503491 type_III_secretion virulence secretion "Salmonella enterica subsp. arizonae serovar 62:z4,z23:--" superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 2239.6207 1306.5961 2171.8647 2762.5442 2438.2339 3537.2117 3359.3593 1605.072 3164.3596 1310.2171 68135537 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 1374.97865 1205.802525 1464.729583 1379.644383 1790.5172 1313.471178 931.3169429 1212.43778 1047.352529 1042.544411 2288.182157 1438.149189 229869875 B_lactamase_C Antibiotic resistance Beta-lactamases Spirosoma linguale DSM 74 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Spirosoma;species:Spirosoma linguale; 2675.8076 2936.5856 3245.4167 5096.7257 3981.3508 2343.1867 2043.4096 1694.0898 5382.4376 3034.1588 2862.051 2591.3079 119526033 acc soil_benifit Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 1215.9856 1768.2971 2004.1663 1647.5246 1430.172152 2593.4353 1515.4006 2129.7104 1984.1051 1816.1337 1860.22487 2008.5345 32350479 terminase_large_subunit Bacteria phage REPLICATION Enterobacteria phage RB69 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 4634.4515 3704.3245 2554.6603 3917.136 3423.7698 2976.6004 3166.8496 2191.1033 3155.4056 3956.5411 2166.5628 2137.8658 109452530 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 631.6574207 938.4591 606.3162 849.1862 239807022 glnR Stress Nitrogen limitation Geobacillus sp. WCH70 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 1093.1875 562.2728198 987.8518 650.4436524 463.4620562 649.1231 898.9843 489.9062263 693.9725 603.1376129 866.3464 145213760 nagI Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 10527.8719 7041.4341 9423.8839 10888.4913 5545.8158 6890.7507 5986.7133 6034.8877 7764.051 8999.935 7532.6982 8441.8239 86156746 cytochrome Energy process Energy process Anaeromyxobacter dehalogenans 2CP-C superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter;species:Anaeromyxobacter dehalogenans; 4101.2699 3757.8178 4920.4527 1953.7328 3758.5952 4101.9863 3572.7121 3776.4241 5046.9599 4995.7244 3141.6253 4674.4502 72160988 amyA Carbon cycling Carbon degradation Starch Thermobifida fusca YX superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiopsaceae;genus:Thermobifida;species:Thermobifida fusca; 2178.9738 4035.0448 2896.1783 2445.6383 1185.461853 2169.3946 4304.97121 3009.8121 2422.9788 2944.3806 2683.8605 3252.4518 213691058 amyA Carbon cycling Carbon degradation Starch Bifidobacterium longum subsp. infantis ATCC 15697 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium longum; 3243.1073 3210.2447 4056.4583 4177.389 2036.9367 4851.0121 5383.1269 3275.4161 4104.9803 3797.408 2788.0713 6816.9713 156524374 gyrB other category gyrB Vibrio harveyi ATCC BAA-1116 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio harveyi; 1085.2625 977.8255 1012.0645 1015.5619 1447.807 581.6756902 867.1148 887.4626 853.9096 1121.1321 529.4077258 149201866 fnr Stress Oxygen stress Roseovarius sp. TM1035 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 3457.7957 8919.9416 3969.7836 3732.7262 10113.2438 5300.3439 8425.0198 2942.2097 6262.2352 5020.3687 5406.9292 3212.6555 150274229 CopA Metal Resistance Copper Bacteroides capillosus ATCC 29799 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;genus:Pseudoflavonifractor;species:Pseudoflavonifractor capillosus; 1887.4795 2103.0058 2128.4789 2060.7104 2544.9574 2531.1124 1872.8473 1853.3094 2180.7508 2335.2843 3035.4606 2207.2004 209908220 catB Organic Remediation Aromatics BTEX and related aromatics Enterobacter cancerogenus ATCC 35316 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter;species:Enterobacter cancerogenus; 831.0159 650.5712 842.5486 1184.3154 933.6434 813.1883 746.0465 1932.0114 887.5907 923.7669 952.5169 157804739 AprA Sulphur adenylylsulfate reductase Thiocystis violascens superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Chromatiaceae;genus:Thiocystis; 1660.2454 895.6742 1039.2534 1782.9657 9489.989383 1544.6405 1579.6568 1135.9012 994.2833 1475.2108 1333.7979 2272.0171 32445000 sigma_70 Stress Sigma factors Rhodopirellula baltica SH 1 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Rhodopirellula;species:Rhodopirellula baltica; 2934.248526 2253.106006 3145.74855 1815.748021 2081.9276 2703.1845 2589.049345 3339.744598 2860.417031 2741.100342 1765.5681 3278.518559 163857897 MFS_antibiotic Antibiotic resistance transporter Bordetella petrii DSM 12804 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella petrii; 8426.4831 11338.9246 21603.80747 10354.3289 20000.7554 21984.9655 6310.6784 5666.9662 20777.369 7572.9186 37166.0135 8547.9201 27530821 gyrB other category gyrB Nocardia brevicatena superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Nocardia; 8737.387 9113.4415 8405.7419 10445.979 5302.9063 9532.1956 11030.5968 9894.8312 7272.8853 9742.5151 7704.354 6127.4014 37521840 hrcA Stress Heat shock Gloeobacter violaceus PCC 7421 superkingdom:Bacteria;phylum:Cyanobacteria;class:Gloeobacteria;order:Gloeobacterales;genus:Gloeobacter;species:Gloeobacter violaceus; 1858.5867 2187.8458 2390.5677 1632.8272 2388.0673 2040.4116 1657.2873 1766.4249 1753.6309 1761.8536 3233.2311 1885.5613 68546461 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Shewanella amazonensis SB2B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella amazonensis; 2511.356 5401.2761 3548.2742 6335.2422 4948.4957 6222.5486 2932.9028 2713.3664 3446.233 3943.3423 6176.0048 5378.6039 254514875 sigma_38 Stress Sigma factors gamma proteobacterium NOR5-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 2768.2219 1116.3625 2397.6193 2593.7222 1206.3953 1026.8539 1175.37715 1194.80065 1562.04665 1155.88945 3762.0367 1359.0974 296416445 tre_fun soil_benifit Tuber melanosporum Mel28 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Pezizomycetes;order:Pezizales;family:Tuberaceae;genus:Tuber;species:Tuber melanosporum; 1141.5169 1100.6255 1187.4979 862.1907 1940.1103 1368.4555 759.11115 1103.1592 1002.7637 1033.3432 1414.0161 1195.1355 255553717 Tet Antibiotic resistance other Ricinus communis superkingdom:Eukaryota;kingdom:Viridiplantae;phylum:Streptophyta;order:Malpighiales;family:Euphorbiaceae;genus:Ricinus; 516.1121335 713.8524663 939.1781 862.559 710.7182 919.1621 1105.2394 936.4743 839.4173 167644528 mauAB Organic Remediation Herbicides related compound Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 2017.4505 1271.0699 2036.2404 1133.0045 1478.6921 1336.0302 1341.2022 3212.6676 1589.3576 1375.8852 2720.1137 1880.7825 85085112 nagG Organic Remediation Aromatics Aromatic carboxylic acid Neurospora crassa OR74A superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Sordariaceae;genus:Neurospora;species:Neurospora crassa; 1815.2675 1386.785 1905.9812 1946.7196 1972.7018 1836.9163 1707.894 1507.4177 1495.9681 1729.9399 2557.9236 1896.4785 258566501 phospholipase_D_fungi Fungi function carbon degradation Uncinocarpus reesii 1704 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Onygenaceae;genus:Uncinocarpus;species:Uncinocarpus reesii; 850.7077 468.3665278 562.6054 710.9289 697.3886 434.4171577 494.9174 465.6418326 435.3194711 514.3713 261607396 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium wasabiae; 1487.2643 1619.1838 1927.3542 552.6942991 843.3201 1162.313 1205.3948 1951.6082 1320.1157 1316.9487 1540.0972 1862.079 219994782 ChrA Metal Resistance Chromium Thioalkalivibrio sp. HL-EbGR7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Thioalkalivibrio;species:Thioalkalivibrio sulfidophilus; 4311.2973 943.7646 2267.9853 3160.4847 2129.9901 1359.1078 1746.2619 1987.7999 1851.8081 1808.1385 4153.6137 1343.4631 91682311 AceB Carbon cycling Carbon degradation Others Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 6032.888 2781.2029 4335.253 5854.7194 3737.7966 3912.2658 3128.0114 5970.7471 3380.766 4460.5164 4343.2639 4917.6227 254667884 iro virulence Iron oxidation Neisseria meningitidis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Neisseria;species:Neisseria meningitidis; 8149.4822 7294.5522 8733.2292 9441.3478 6967.6862 8895.7458 17842.81159 7493.5615 7458.9654 7654.2997 9489.5502 9660.7484 17937293 pcc Carbon cycling Carbon fixation Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 2927.1931 1876.1884 2667.1232 3033.9196 933.8898 1480.6127 1391.6368 2217.3091 1779.0256 2080.2091 1729.7474 2695.9347 70732700 pcaG Organic Remediation Aromatics Other aromatics Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 1038.8136 1147.3779 1123.8732 1090.8024 902.8064 968.8213 657.2172124 1229.9063 1074.3688 1170.334422 915.1343706 84383828 pulA Carbon cycling Carbon degradation Starch Janibacter sp. HTCC2649 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Intrasporangiaceae;genus:Janibacter; 2142.8275 2037.764 2992.6332 1306.6754 1326.1626 2434.5995 2083.716 2083.569 2774.4155 2317.2728 1002.426485 2565.2988 148724109 bphA Organic Remediation Aromatics Polycyclic aromatics bacterium YT01 superkingdom:Bacteria; 2654.26225 2220.90635 2490.96285 2870.9944 2993.62535 2672.1652 2502.70045 2412.9807 2113.5597 2367.70605 3751.18955 3921.1348 229379490 fnr Stress Oxygen stress Oxalobacter formigenes OXCC13 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Oxalobacter;species:Oxalobacter formigenes; 1540.0532 1370.4363 996.5073 1411.4751 2341.0287 1400.6564 1809.394 891.9275 1198.163 1309.0094 1692.9898 1729.1636 149277811 sigma_70 Stress Sigma factors Pedobacter sp. BAL39 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Sphingobacteriaceae;genus:Pedobacter; 3573.1791 5469.7928 4044.2597 5481.3522 3037.5451 5628.3203 4190.0397 3492.01 5111.099 4263.2611 2854.8677 5049.5356 29243578 DNA_polymerase_type_I Bacteria phage REPLICATION Pseudomonas phage gh-1 superkingdom:Viruses;order:Caudovirales;family:Podoviridae;genus:T7-like viruses; 1072.4212 470.456312 852.4355 485.6998055 747.6693 576.8598008 545.2373 738.6753 530.9818 632.3002 721.2641 14024906 phn Organic Remediation Herbicides related compound Mesorhizobium loti MAFF303099 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium loti; 718.7757 1738.9128 933.5949 896.8043 1081.9638 1509.2091 1273.1609 789.6464 1186.4908 1461.8781 808.3077071 1307.0999 209875076 CusA Metal Resistance Copper Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 5375.1218 6447.3379 6943.6657 5992.8178 2673.048 7183.8192 5577.0311 3899.2582 7211.8914 7168.012 6213.6514 7248.1533 193214633 pstB Stress Phosphate limitation Chloroherpeton thalassium ATCC 35110 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chloroherpeton;species:Chloroherpeton thalassium; 2202.8968 2497.4389 2551.418 1909.1062 2520.1204 2209.2082 1812.6057 2502.752 1909.1908 2273.6231 3219.2488 2369.3245 121999026 AceB Carbon cycling Carbon degradation Others Halorhodospira halophila SL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Halorhodospira;species:Halorhodospira halophila; 3654.3908 2255.2029 2582.4598 2896.5334 2741.0938 2383.9575 1742.0294 1716.2648 2328.436 2855.518 4343.336 3285.176 70606069 GAPDH Bioleaching Carbon fixation Sulfolobus acidocaldarius DSM 639 539.5113302 902.5934 650.3512 765.7053 840.778098 728.0721 1152.0811 564.7733 794.3643 450.8342 924.6109 837.1926 50954654 TerC Metal Resistance Tellurium Leifsonia xyli subsp. xyli str. CTCB07 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Leifsonia;species:Leifsonia xyli; 2273.4835 947.7658 1737.0033 2163.5515 725.709 1145.1761 992.2356 1037.1048 1773.9022 1248.5827 2167.4452 257804875 proV Stress Osmotic stress Enterococcus gallinarum EG2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Enterococcaceae;genus:Enterococcus;species:Enterococcus gallinarum; 911.7575 1090.2361 771.9013 828.6044 1177.726376 982.5533 888.4035 738.167 932.8934 936.9098 1656.9529 965.3978 56710240 bphA Organic Remediation Aromatics Polycyclic aromatics uncultured bacterium superkingdom:Bacteria; 1658.7678 1561.705978 1404.776 1144.4693 2485.4245 1727.4213 1344.5573 2472.4429 1714.5254 1533.3769 1587.8101 2205.3877 116694355 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 1720.6907 1379.3179 1925.4059 2047.958 791.9005005 1896.2778 3039.7021 2893.5263 1927.6776 1503.2274 1513.7422 1277.6028 242213620 ureC Nitrogen Ammonification Postia placenta Mad-698-R superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Postia;species:Postia placenta; 690.7733018 752.8939 921.8645497 908.5347 982.0196 1045.923 820.6894 882.3965614 119774539 cellobiase Carbon cycling Carbon degradation Cellulose Shewanella amazonensis SB2B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella amazonensis; 3496.2658 1345.0022 1719.7449 2706.7405 1683.9291 2031.1237 3259.8043 2762.316 1489.1301 2278.849 1290.914 1127.9339 86138911 pstB Stress Phosphate limitation Roseobacter sp. MED193 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 604.4434296 597.1016081 561.1020624 494.5732 158308583 sod_CuZn soil_benifit Acaryochloris marina MBIC11017 superkingdom:Bacteria;phylum:Cyanobacteria;genus:Acaryochloris;species:Acaryochloris marina; 1886.8348 1325.7864 1505.1712 1941.5831 2087.2174 1631.2674 1210.2352 1364.1636 1191.1037 1401.6462 3183.0437 1544.8892 40783181 phospholipase_B_fungi Fungi function virulence Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus; 3035.9007 2550.3587 2261.1808 2947.3649 1590.9136 2950.412 3639.8932 4364.3891 2167.6807 2355.9757 2103.4982 2119.6429 171914263 TerD Metal Resistance Tellurium Verrucomicrobium spinosum DSM 4136 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobiaceae;genus:Verrucomicrobium;species:Verrucomicrobium spinosum; 1146.272 1222.5335 1480.8757 924.8569 819.3917792 1231.082 1058.2776 1650.696 975.8314 1183.666 1363.7326 1485.3869 134050922 TerD Metal Resistance Tellurium Desulfotomaculum reducens MI-1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfotomaculum;species:Desulfotomaculum reducens; 3552.9232 2165.5463 4039.8688 4001.0333 1246.9118 2239.9434 2097.962 2543.1319 2209.3606 2320.2766 2029.9348 1602.3728 251848602 dsrA Sulphur sulfite reductase Ruminococcus sp. 5_1_39B_FAA superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Ruminococcus; 451.9188147 728.5938 532.2196051 574.0487083 670.7125 795.7493 561.0031 608.42125 587.3102 512.84155 680.148472 616.09495 218516356 nagK Organic Remediation Aromatics Aromatic carboxylic acid Rhizobium etli 8C-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 3511.2831 4294.4577 4061.5908 3680.2099 4875.8996 4179.3552 3069.9376 3651.1086 3688.1231 3546.9892 5448.0113 4460.9672 223578709 CadA Metal Resistance Cadmium Tolumonas auensis DSM 9187 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Tolumonas;species:Tolumonas auensis; 2144.614 3139.9695 2391.9053 2581.7369 2945.7999 2911.1667 2431.6309 1989.8698 2626.4624 3044.6888 2476.0477 3293.2094 218439752 pstA Stress Phosphate limitation Cyanothece sp. PCC 7424 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 927.3725 1174.38365 1794.09985 587.6101 967.7705 1184.2987 1007.616251 1738.231556 1249.09795 1338.0198 1231.7654 1670.4578 161394256 sigma_24 Stress Sigma factors Roseobacter litoralis Och 149 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter litoralis; 1261.924 2498.7131 1957.0729 1393.1068 3294.2004 2056.0858 1799.0708 2110.6099 1837.1421 2152.1322 2129.9012 1821.0193 34761694 phenol_oxidase Carbon cycling Carbon degradation Lignin Rigidoporus microporus superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Rigidoporus; 2011.9835 1504.6537 3183.3477 1081.0498 1093.605 2058.9424 1566.5463 2663.9083 2384.7586 1885.3098 2998.5407 237799999 type_III_secretion virulence secretion Pseudomonas syringae pv. oryzae str. 1_6 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas coronafaciens; 1532.6654 1779.0391 621.4322 1376.93 1563.6498 1437.733 1154.0999 805.5999 1379.5835 992.2172 1712.0413 1569.8684 192359201 atzA Organic Remediation Herbicides related compound Cellvibrio japonicus Ueda107 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Cellvibrio;species:Cellvibrio japonicus; 1146.0839 2226.3028 1595.3887 1094.6788 2976.2869 849.218 1852.2927 1102.2877 1011.978 970.398 1703.2963 1090.0189 168148915 endolysin_transglycosylase Bacteria phage LYSIS Azospirillum phage Cd superkingdom:Viruses;order:Caudovirales;family:Siphoviridae; 5775.7401 4399.4946 6234.6768 3666.3343 3895.6537 2970.0645 3735.4976 9113.2947 4450.3829 4358.5891 8787.8636 4767.02 146190352 Arylest Organic Remediation Aromatics Other aromatics Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1571.5788 1562.8234 1252.2423 1948.8291 2117.8939 1643.4418 1294.6331 1450.3097 1467.1952 1743.9649 1566.1879 1286.3503 58039597 katE Stress Oxygen stress Gluconobacter oxydans 621H superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconobacter;species:Gluconobacter oxydans; 612.2172 1254.6702 1124.2512 728.6809 990.181 1570.4118 1327.9113 1366.8396 1384.6509 1132.8501 150029499 cellobiase Carbon cycling Carbon degradation Cellulose Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 2450.0645 816.9252 1780.2582 1845.3853 1325.6318 1126.3281 1098.3202 772.5794 1316.5162 1442.2921 1547.713 1500.2865 121605776 silC Metal Resistance Silver Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 2257.7811 3621.0137 4625.2139 1873.8899 2261.4176 4065.2985 2702.9591 3602.1347 4223.4617 3517.052 888.069383 4145.2879 56965568 alkH Organic Remediation Other Hydrocarbons Bacillus clausii KSM-K16 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus clausii; 1013.7758 753.1105 1030.108 1243.8722 1118.3714 1307.5715 1387.9606 950.9493 1583.1346 735.5732 222110696 silC Metal Resistance Silver Diaphorobacter sp. TPSY superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax ebreus; 6086.91265 4982.0715 6468.5808 4235.624 2937.0691 5568.226 4259.4174 5295.11085 6065.19925 5626.3831 5720.7386 6749.58665 183599410 ppx Phosphorus Phosphorus utilization Providencia stuartii ATCC 25827 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia stuartii; 707.3582 870.9919 563.3196662 612.4565104 1000.0207 662.3392 620.4934 486.8823 673.0406 598.3877 950.6534692 511.0201728 170777394 obgE Stress Radiation stress Leptothrix cholodnii SP-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Leptothrix;species:Leptothrix cholodnii; 2078.6614 1709.9659 1564.4777 2654.1283 1381.6572 1075.731 1721.0732 997.8399 1895.0024 1815.62 1303.0224 816.1547 110336265 ZntA Metal Resistance Zinc Acidovorax sp. JS42 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax; 4760.9032 2425.4562 3258.575 4133.1596 3601.0415 2427.1363 2266.7464 2413.9672 3373.9164 2607.9578 4833.8703 2578.1523 171741858 mannanase Carbon cycling Carbon degradation Hemicellulose Bifidobacterium dentium ATCC 27678 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium dentium; 445.5384367 556.3527 834.4647 689.5962 385.2711555 436.9594641 899.2506 530.2013 849.6775 779.4069 126731346 cat_bac soil_benifit Sagittula stellata E-37 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 1790.5387 1531.8845 2621.1348 1496.9888 1040.9543 2287.0108 1778.7226 1987.1705 2342.8108 1633.2719 1468.1435 1739.1333 223892904 phoB Stress Phosphate limitation bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3; 1861.0448 1275.6827 1639.1089 1725.92925 1768.40325 1666.4969 1241.32525 1318.4095 1306.9233 1302.35975 2500.69695 1739.79245 58418754 pstB Stress Phosphate limitation Wolbachia endosymbiont strain TRS of Brugia malayi superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rickettsiales;family:Anaplasmataceae;genus:Wolbachia;species:Wolbachia endosymbiont of Brugia malayi; 1749.8119 1907.64975 2176.90265 1784.6026 1998.84695 2071.6029 1498.47625 1490.393 1619.7089 1673.33155 3273.88075 1923.0506 152978401 sigma_70 Stress Sigma factors Actinobacillus succinogenes 130Z superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Actinobacillus;species:Actinobacillus succinogenes; 2470.7368 2117.5323 2830.0672 2802.4314 2934.1777 2212.5285 1855.5273 2086.6555 1696.5161 2176.1289 3552.3019 2488.6449 126194731 limEH Carbon cycling Carbon degradation Others Pseudomonas aeruginosa 2192 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 2785.9122 3436.7946 4051.2386 2362.193 2298.0095 4338.0713 3505.4392 3944.855 4413.8519 3736.3387 2659.5957 3688.3303 151281591 nmoA Organic Remediation Aromatics Nitoaromatics Janthinobacterium sp. Marseille superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Janthinobacterium; 1239.801 752.7282 680.7409346 1139.9354 860.8372516 723.4057 804.7741 644.4073 534.6163 741.7984 1049.2505 238593253 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Moniliophthora perniciosa FA553 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Marasmiaceae;genus:Moniliophthora;species:Moniliophthora perniciosa; 3056.6133 2129.2045 2633.4498 2754.1476 3728.8098 2643.9875 1909.38 2107.1723 2335.8214 2457.6351 7234.5048 20103.79794 87331868 arhA Organic Remediation Aromatics Heterocyclic aromatics uncultured bacterium superkingdom:Bacteria; 2785.0928 3812.8784 3341.7554 2921.9012 5394.9738 3424.0028 2565.4999 3359.2382 2900.6084 3366.5617 4189.5305 3875.2138 229213854 phoA Stress Phosphate limitation Dethiosulfovibrio peptidovorans DSM 11002 superkingdom:Bacteria;phylum:Synergistetes;class:Synergistia;order:Synergistales;family:Synergistaceae;genus:Dethiosulfovibrio;species:Dethiosulfovibrio peptidovorans; 4734.7908 3850.7237 4504.8706 4708.4009 2596.8118 5451.9857 6579.2767 4088.7022 5437.6769 5662.6294 4616.0633 3597.9302 194011749 cat_bac soil_benifit Bacillus pumilus ATCC 7061 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus pumilus; 679.2617567 418.3305937 572.680506 435.33112 661.9267 63254774 TerZ Metal Resistance Tellurium Pseudomonas syringae pv. syringae B728a superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae; 1087.6937 1067.5331 606.1075 1098.8702 980.3597 768.0809 676.4473 570.4583843 1425.692 14501.12838 184193265 SMR_antibiotics Antibiotic resistance transporter Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 2893.6795 1275.0073 1736.0291 2651.2655 1310.2935 1424.1976 2236.6829 1164.4189 2107.3625 2503.9646 2231.6694 2161.5403 145602658 chitin_synthase Fungi function major biomolecule Magnaporthe oryzae 70-15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe;species:Magnaporthe oryzae; 1973.9164 2955.5847 1953.3508 1426.7068 5086.7486 2491.1193 2550.3248 2424.2598 3313.6448 3365.4116 1053.022295 2028.57 26278924 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1139.6095 1593.2144 1800.5117 1493.1946 2221.1286 1135.257 1760.0491 3099.8316 1648.0449 2395.1141 920.2142994 1963.6846 70992885 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 1027.0872 763.3521 834.3573 678.6364326 632.960426 708.9977 571.3337 644.829 957.7407265 998.8224 217969610 sigma_70 Stress Sigma factors Thauera sp. MZ1T superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Thauera; 2950.5787 1300.9257 1907.6677 2122.1575 1027.472319 1462.9444 1134.5202 1894.8754 1572.5016 1518.1123 2145.301 1964.2202 194541262 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Vibrio sp. Ex25 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 2911.5982 2197.9442 2165.48915 2895.37595 1908.78915 2341.3246 3920.61555 3643.28915 2465.3751 2343.2906 2825.1252 2060.81355 110826476 APS_AprA Sulphur adenylylsulfate reductase uncultured Thiobacillus sp. superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Hydrogenophilales;family:Hydrogenophilaceae;genus:Thiobacillus; 1401.1632 1004.7632 1464.4315 1583.5572 942.276 679.5078 1135.9618 2321.1438 995.1652 1011.12339 616.1705 169242378 nagG Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium abscessus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 3850.2874 5807.8018 4337.463 5002.158 2636.9681 6062.6809 6182.3839 4796.8022 6597.3402 5544.1534 2535.8449 5178.8806 16264706 Catechol Organic Remediation Aromatics Other aromatics Sinorhizobium meliloti 1021 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium meliloti; 2297.4333 2185.5394 2546.6491 2732.0535 1097.0366 2185.323 2730.0059 2877.0282 1969.6604 2548.5969 1778.8057 2065.9082 110621602 arsB Metal Resistance Arsenic uncultured methanogenic archaeon superkingdom:Archaea;phylum:Euryarchaeota; 1492.0596 1924.215 2203.0956 2009.3858 2250.8381 2276.5714 1426.1737 2587.0099 2071.2508 2249.8609 2967.8794 2420.1479 183976680 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 775.3166682 680.6089 1146.595655 872.8897 913.3597 29466030 norB Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 720.0652 995.1553 923.7953 732.7069008 1316.2468 911.5641171 1220.2946 769.1097258 757.8193255 545.9499297 969.5587 134291716 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia vietnamiensis G4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia vietnamiensis; 1085.0207 1559.5359 2135.6033 1186.5207 725.0303352 1938.4396 1304.899 1911.1557 1891.5426 1514.1036 1487.5841 118616369 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium ulcerans Agy99 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium ulcerans; 2464.52435 2744.3004 2577.3928 2768.8862 2460.23675 3261.5252 2971.99525 3076.083 3081.73195 3142.2389 2168.4247 2899.9905 111220086 cydB Stress Oxygen limitation Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 3055.1626 3996.3074 3192.3185 4628.5032 3087.3897 4016.0176 3264.4956 2375.9558 3381.9658 3782.6125 2694.6235 3801.7183 6460912 linB Organic Remediation Pesticides related compound Deinococcus radiodurans R1 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus radiodurans; 2173.5472 3251.2885 3790.284 1590.9949 1545.5813 3319.6677 2680.7413 3300.5688 3580.883 3169.0831 683.3557563 4351.4791 189341260 pstC Stress Phosphate limitation Chlorobium limicola DSM 245 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium limicola; 9316.6414 7324.5482 11302.2982 5673.0217 6258.865 5396.2735 5990.9228 16987.1603 6548.1467 7069.0102 13162.6478 9799.4314 118761900 catB Organic Remediation Aromatics BTEX and related aromatics Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 7866.3966 4306.5632 6252.5895 8492.2463 5548.2427 5743.7679 4711.5681 3835.3598 5479.846 5867.0089 9795.936 6220.6852 167729121 obgE Stress Radiation stress Candidatus Cloacamonas acidaminovorans superkingdom:Bacteria;genus:Candidatus Cloacamonas; 547.140919 1669.5678 1312.8138 1543.6015 1509.7099 2917.7026 1309.6821 766.4062 15277.17782 1929.1605 999.6156064 2117.844 301117938 CBEL_Oomycetes soil_borne_pathogen oomycete elicitor Phytophthora infestans T30-4 superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora;species:Phytophthora infestans; 777.8509 769.9562 632.962 670.1103 1714.6435 884.8374263 936.6473 1675.2071 843.8722 1130.9827 998.2868 283809747 sigma_70 Stress Sigma factors Kribbella flavida DSM 17836 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Kribbella;species:Kribbella flavida; 3223.82525 1525.631714 2016.17523 2818.651892 1673.54875 2152.739972 2413.611755 3373.41235 1753.50855 2405.961766 2228.6784 1796.34915 19909671 gyrB other category gyrB Arhodomonas aquaeolei superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Arhodomonas; 2691.5234 2869.0883 1816.4325 1696.0823 1591.3117 1680.309 1324.1231 1275.4998 1781.8563 1488.0187 2674.587 2244.9918 239910816 pstB Stress Phosphate limitation Thermococcus gammatolerans EJ3 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Thermococcus;species:Thermococcus gammatolerans; 639.2601448 324.5536909 780.2247 1264.8665 723.3705244 659.8248 829.4377534 899.228 763.2715 1302.8703 228768642 akbF Organic Remediation Aromatics BTEX and related aromatics Bacillus pseudomycoides DSM 12442 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus pseudomycoides; 912.3888 856.7266 628.2314112 595.3003863 685.8206 604.09675 747.2694 667.6937 721.50895 973.8158 7190353 pulA Carbon cycling Carbon degradation Starch Chlamydia muridarum Nigg superkingdom:Bacteria;phylum:Chlamydiae;class:Chlamydiae;order:Chlamydiales;family:Chlamydiaceae;genus:Chlamydia;species:Chlamydia muridarum; 2316.2116 1392.4172 1707.3863 2087.311 1299.3539 1512.8883 1586.3095 1844.7153 1747.2123 1822.3981 1464.8521 1335.8279 29609465 TerZ Metal Resistance Tellurium Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 2811.85 751.659722 1090.2724 2564.2178 1345.8489 1236.6158 2072.716 2875.0189 1211.932 1909.5745 1679.4478 1927.5823 114189723 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 668.4448 944.733 892.3028 1360.3697 999.9638 635.2683 645.7853 672.528 793.0412 821.2569671 935.2416 262197293 Tet Antibiotic resistance other Haliangium ochraceum DSM 14365 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Haliangiaceae;genus:Haliangium;species:Haliangium ochraceum; 2910.9534 1127.1555 2423.1797 3004.6754 1207.4759 1595.5169 1272.6562 1861.4313 1706.5575 1644.9409 2420.3587 1858.3987 221739443 glucoamylase Carbon cycling Carbon degradation Starch Agrobacterium vitis S4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium vitis; 2546.1994 456.5923774 720.4024 2074.3395 932.2972 769.6898089 1444.5605 2421.5202 722.3272 1215.3675 1231.6543 126249062 CopA Metal Resistance Copper Pyrobaculum calidifontis JCM 11548 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Thermoproteales;family:Thermoproteaceae;genus:Pyrobaculum;species:Pyrobaculum calidifontis; 6532.153 6718.1937 3831.2126 6557.8544 6807.99 4734.3232 3470.7647 4118.975 4227.5388 3909.4968 10917.7648 3855.7139 224712622 hzo Nitrogen Anammox uncultured planctomycete superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales; 5425.275699 11539.5721 9720.782808 7204.051722 15452.6851 10324.11534 9757.564635 10454.37675 11713.12831 12012.14351 4614.501249 26021.1251 119473354 cellobiase_fungi Fungi function carbon degradation Neosartorya fischeri NRRL 181 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Neosartorya fischeri; 622.9228 1511.6111 1346.7635 762.1714 812.8143 626.5638 1008.5198 1316.376 969.3895 1203.9554 853.8823756 1481.4046 146192926 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 765.829 1478.3275 1106.862 672.0006 1988.2675 967.5821 1031.3111 1212.2792 1139.6504 884.729 609.0476648 870.1915 119898828 proO Organic Remediation Aromatics Other aromatics Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 526.949 351.9120252 392.4219954 534.6784 752.9021 491.8040142 429.1815 379.7857532 392.2884268 467.2154 707.5965789 517.2271735 52217468 ChrA Metal Resistance Chromium Bacteroides fragilis YCH46 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides fragilis; 5181.0788 1517.3453 1647.9198 4189.0455 3032.9 1357.328 2269.0748 1976.0709 1960.4927 2208.5004 5040.7702 1380.2933 119670687 nahA Organic Remediation Aromatics Polycyclic aromatics Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 7223.876 16599.0259 14305.6906 8150.2054 19129.7354 9159.4401 10296.571 11944.2662 10318.1386 12871.0304 11082.3334 9173.6071 63081888 nosZ Nitrogen Denitrification unidentified bacterium superkingdom:Bacteria; 1573.0832 632.7313967 1515.6311 638.9027 1242.6501 1346.1888 802.9262 1213.4357 636.4784883 86156976 linB Organic Remediation Pesticides related compound Anaeromyxobacter dehalogenans 2CP-C superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter;species:Anaeromyxobacter dehalogenans; 6450.5384 5657.5544 5049.4906 6802.3415 8782.8153 5665.9205 6926.4231 3845.0916 4897.737 4865.2221 6925.0759 5380.5676 68346920 pilin virulence pilin Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 7343.3026 13300.7556 12138.1587 11482.7173 16164.1038 12726.4549 8933.0133 9661.4972 14427.2776 11096.4918 10220.0663 10666.2859 145231168 xylanase_fungi Fungi function carbon degradation Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 1475.3229 1412.1045 1301.0368 1561.8603 998.2195 856.5167 1199.8202 967.3008 721.6283 741.5081 1166.2984 1265.2025 338179066 CysJ Sulphur sulfite reductase Xylella fastidiosa EB92.1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xylella;species:Xylella fastidiosa; 4897.335 3305.3424 3293.9641 5940.7809 2931.3528 3746.251 5387.8297 4646.2492 3192.2163 4822.6109 3878.7722 3403.2467 14026768 pobA Organic Remediation Aromatics Aromatic carboxylic acid Mesorhizobium loti MAFF303099 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium loti; 1168.8113 1323.3908 1070.8913 1512.8094 1024.8008 1876.2364 1135.2543 1488.1114 1820.5307 1948.5454 941.4041 1858.7008 86751473 sox Sulphur Sulphur oxidation Rhodopseudomonas palustris HaA2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 7361.181 3724.3686 6552.2483 7473.2189 4434.6733 4067.8112 17814.12069 3976.0962 5965.8746 4611.4422 6805.7617 5134.4565 255003048 sigma_70 Stress Sigma factors Anaplasma marginale str. Puerto Rico superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rickettsiales;family:Anaplasmataceae;genus:Anaplasma;species:Anaplasma marginale; 2366.5559 4311.1632 4195.9501 2213.0817 5605.8228 3199.7034 3301.6362 3829.5376 3024.3318 3635.6173 2522.223 3228.173 82714858 pcaG Organic Remediation Aromatics Other aromatics Pseudomonas putida F1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 2699.0724 3054.416 3262.6896 1893.628 1534.3952 3068.6863 2468.7486 3158.0289 3454.4688 2829.5002 1480.0117 2856.4796 157960084 proV Stress Osmotic stress Shewanella pealeana ATCC 700345 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella pealeana; 653.9551627 596.976 579.281155 731.3817685 596.3028327 689.0051 1152.5325 667.0763 862.8092 711.3357 45386243 narG Nitrogen Denitrification unidentified bacterium superkingdom:Bacteria; 5196.9424 2706.2002 4581.1884 5474.3254 2253.227 2988.8945 3238.1944 4210.8343 3507.0288 4520.6924 2881.2707 3273.4486 171741521 ppk Phosphorus Phosphorus utilization Bifidobacterium dentium ATCC 27678 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium dentium; 1370.9809 947.0294 1146.7842 635.6552404 841.8894 628.8208 628.708 805.8385 1050.1487 1236.8587 678.1285618 15157718 tftH Organic Remediation Aromatics Chlorinated aromatics Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 1554.1705 4072.1002 2850.7279 2248.0789 1253.1495 3509.7921 2975.0559 2887.0627 4419.024 4445.6762 942.8214492 3627.5372 81251649 nirS Nitrogen Denitrification uncultured organism 2869.0178 3221.3689 2776.2857 3987.6919 4006.074 3130.4258 2878.2128 1945.5318 3683.1374 4292.8969 3187.4643 2737.8183 120611544 pimF Organic Remediation Aromatics Aromatic carboxylic acid Acidovorax avenae subsp. citrulli AAC00-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax citrulli; 4117.6573 3772.5227 4658.3203 3498.4848 4578.4814 3931.8884 3417.6384 5931.2993 3243.192 3908.0564 6041.5151 4975.738 67540966 AceB Carbon cycling Carbon degradation Others Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 2370.83405 1295.01315 1363.0913 2009.4269 1543.6285 1696.18515 1397.0795 1049.22255 1623.72195 1715.66355 2739.30935 1566.21555 253756967 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria; 1063.9051 878.8923 1133.7455 1047.6963 898.0942 920.2753 607.9221 655.7369 946.9187 851.4306 870.3872766 1169.6528 72162277 pimF Organic Remediation Aromatics Aromatic carboxylic acid Thermobifida fusca YX superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiopsaceae;genus:Thermobifida;species:Thermobifida fusca; 554.5824546 2297.4445 3103.5404 1034.8754 959.5611 1291.4755 1549.731 2500.8395 1676.0606 2099.3372 1045.983087 2717.0688 85837715 toxin virulence toxin Vibrio sp. MED222 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 1813.6153 374.6448004 977.1407 1735.0107 808.1502 450.7825 859.4527 632.2425 694.1601 1114.9477 1372.5736 1197.1038 157411422 napA Nitrogen Dissimilatory N reduction uncultured prokaryote 697.7273 448.5390624 537.7300881 707.2843328 708.9059 658.6177 167348709 CopA Metal Resistance Copper Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 6712.1593 5741.7062 7120.4077 7252.2504 4607.9824 6112.7096 7436.6762 4352.188 6699.909 5085.0671 5681.7707 6152.3668 170721567 phdCI Organic Remediation Aromatics Polycyclic aromatics Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 3936.7377 3599.984709 3340.145105 3119.37845 2888.42835 2604.43565 3903.12345 6319.645343 2370.31975 3583.71005 4870.90425 3292.77685 238060081 amyA Carbon cycling Carbon degradation Starch Micromonospora sp. ATCC 39149 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Micromonospora; 2492.4165 1529.8542 2290.0126 2070.0932 2235.0259 1660.133 1638.8891 1870.2675 1955.2856 1683.5209 3119.2584 2076.798 183976694 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 5400.7238 5121.6407 5879.1718 5004.0072 7134.2837 5735.5719 3943.9116 4980.6782 4613.5962 4574.5036 8585.144 5855.446 120610839 pimF Organic Remediation Aromatics Aromatic carboxylic acid Acidovorax avenae subsp. citrulli AAC00-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax citrulli; 9611.44 6080.7474 6974.8529 6003.2142 7314.3234 6197.5716 4669.5067 10129.4484 6399.3781 6932.3329 12739.9349 6703.3361 256398130 sigma_24 Stress Sigma factors Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 5803.3569 2752.341 4154.2364 5471.038 3488.7821 2935.1565 3139.0113 3390.3583 4169.0262 4759.2301 3329.5458 2921.9829 37199310 CadA Metal Resistance Cadmium Vibrio vulnificus YJ016 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio vulnificus; 2729.9667 3406.5692 3710.5203 2866.303 3026.4348 3253.3067 4391.9731 7207.4165 3023.8658 2637.3702 3527.7968 2647.02 114795205 endochitinase Carbon cycling Carbon degradation Chitin Serratia marcescens superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Serratia; 525.9953 9159.082815 483.6678532 495.9268 673.4938 404.3333916 688.032 550.214 99038903 glnA Stress Nitrogen limitation Ruegeria sp. TM1040 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 1187.0658 1318.7016 928.2735 1474.4838 621.18914 1302.4683 1875.7722 1097.5791 875.3477 1192.6773 933.786 123440525 hasA soil_borne_pathogen iron uptake Yersinia enterocolitica subsp. enterocolitica 8081 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia enterocolitica; 1296.7943 830.4578 1376.9184 1028.191 1278.51735 760.41505 873.2743 1071.9302 658.6309 678.8196 1077.55155 1345.2895 69933119 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 4338.041 3340.6052 4703.4363 5229.4547 2731.8416 4298.0782 4878.781 3463.335 3810.8796 3319.819 3812.5844 3762.5536 227549113 oxyR Stress Oxygen stress Corynebacterium lipophiloflavum DSM 44291 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium lipophiloflavum; 3172.5743 3278.5129 3038.73065 3556.3774 2801.84015 3149.33805 2651.8478 2789.91985 3406.0791 2719.66695 3091.6902 3078.46985 82740121 ZntA Metal Resistance Zinc Pseudomonas putida F1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1157.4342 2660.0976 2240.1712 1521.4389 1684.3651 2397.5528 2285.0529 2124.2393 2565.2705 2923.4547 2514.0909 6682326 PobA Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas putida superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 766.5543 1357.388 844.6569 1082.803 563.5522524 1448.681 2373.2245 821.6017 1077.049 1041.0593 998.0781 476.0989275 262183371 grpE Stress Heat shock Corynebacterium aurimucosum ATCC 700975 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium aurimucosum; 398.1087216 557.9838 891.0524 702.9614743 431.6053962 829.1139 1140.053 619.3972 630.6364 789.3766 192283443 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris TIE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1496.6266 837.428 970.048562 1009.3569 1664.6283 1145.532 921.8507 965.8362 1296.0607 1034.0691 126232912 chnB Organic Remediation Other Hydrocarbons Mycobacterium sp. JLS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 9482.2213 3726.7897 5451.2457 7769.4005 5660.2746 5060.9984 4551.0193 7954.2501 6159.9808 6384.25 15797.8105 6274.9692 78217865 Arylest Organic Remediation Aromatics Other aromatics Desulfovibrio desulfuricans G20 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio alaskensis; 1268.1566 1254.6192 1833.5454 475.8239049 833.5939 1246.5916 1133.7058 2336.524 1055.4985 1240.1347 1769.4955 222440339 sox Sulphur Sulphur oxidation Labrenzia alexandrii DFL-11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia alexandrii; 1726.977 430.4573314 1031.7801 1271.5823 949.1712 1308.1517 1292.8208 1151.1042 861.5087 1371.0837 846.7710936 914.9864 150959145 MFS_antibiotic Antibiotic resistance transporter Pseudomonas aeruginosa PA7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 1378.9865 1535.0956 1503.1938 2553.6599 1045.7736 1795.6412 975.6286 1044.4553 1032.3271 1361.7409 264680154 katE Stress Oxygen stress Comamonas testosteroni CNB-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 1463.1398 452.1452145 651.5725 1130.5115 763.1592 664.0891 613.8751 1126.1452 591.5563 752.2614 1243.6816 675.3294 32476530 groEL Stress Heat shock Rhodopirellula baltica SH 1 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Rhodopirellula;species:Rhodopirellula baltica; 1610.8951 3164.3333 3411.6176 2265.3925 2153.1965 2013.2659 1859.2895 3140.8408 2048.3606 2066.921 2043.6529 2651.3732 168701486 pstB Stress Phosphate limitation Gemmata obscuriglobus UQM 2246 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Gemmata;species:Gemmata obscuriglobus; 5926.3564 4876.6396 6261.6548 5403.2832 3594.87015 5099.5782 4700.4305 5233.31855 6575.25375 5623.491 4211.96945 5396.1126 170656774 phn Organic Remediation Herbicides related compound Methylobacterium radiotolerans JCM 2831 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium radiotolerans; 7084.4354 5604.5836 7493.2147 8235.13 4517.5075 5365.5982 3658.3488 5981.411 5801.1237 5543.8519 6445.8011 7553.6431 254416971 fnr Stress Oxygen stress Microcoleus chthonoplastes PCC 7420 superkingdom:Bacteria;phylum:Cyanobacteria;order:Oscillatoriales;genus:Microcoleus;species:Microcoleus chthonoplastes; 778.7106 825.2716 838.7538 793.1826 997.9352 781.2866 752.2519 926.5579 635.3912 628.6934 1186.2148 857.7088 227454991 pstB Stress Phosphate limitation Corynebacterium aurimucosum ATCC 700975 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium aurimucosum; 1076.1016 885.0597 1074.2354 1130.7399 808.6715 752.5387 977.7952 931.1111 811.7227 654.44034 220922349 catB Organic Remediation Aromatics BTEX and related aromatics Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 2522.7332 3435.7369 2802.8493 3219.2882 1523.9296 4214.8315 2971.7754 3202.7421 4093.3547 3824.9221 2124.808 3661.9917 148240964 CueO Metal Resistance Copper Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2626.4842 2691.1385 2858.7682 2707.9322 3937.0424 3087.3816 2127.0161 2434.0966 2264.9726 2374.3892 4576.3266 3031.6219 224462435 sigma_24 Stress Sigma factors Methylophaga thiooxidans DMS010 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Thiotrichales;family:Piscirickettsiaceae;genus:Methylophaga;species:Methylophaga thiooxidans; 653.6193534 719.9561655 649.8928 530.4191232 506.9287804 162954327 alkK Organic Remediation Others Renibacterium salmoninarum ATCC 33209 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Renibacterium;species:Renibacterium salmoninarum; 1340.8522 1050.1649 1146.6856 1313.9899 898.8337 1782.61 1751.7905 836.6594 1201.5179 1504.0761 1143.8834 714.0272 224825720 pcc Carbon cycling Carbon fixation Lutiella nitroferrum 2002 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Lutiella;species:Lutiella nitroferrum; 3165.4955 1847.7852 1607.5001 3602.0381 1669.7284 2439.9389 3180.0862 2904.2749 2111.5677 2471.7718 1690.5152 4600.735 167615931 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Burkholderia thailandensis Bt4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia thailandensis; 16333.0466 10469.2324 16865.3816 18063.6794 12754.2502 13520.6488 11342.8508 11146.2436 12439.7011 15301.5198 11325.5825 13419.8003 114334520 linB Organic Remediation Pesticides related compound Shewanella frigidimarina NCIMB 400 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella frigidimarina; 780.0179994 1003.5145 638.3285303 750.501032 449.9541 742.3518 580.1073866 54026179 ppk Phosphorus Phosphorus utilization Nocardia farcinica IFM 10152 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Nocardia;species:Nocardia farcinica; 850.2779 1138.078673 969.2748 863.8742021 1142.6604 1232.5448 473.4370272 1005.971 1129.8065 2650152 CopA Metal Resistance Copper Archaeoglobus fulgidus DSM 4304 superkingdom:Archaea;phylum:Euryarchaeota;class:Archaeoglobi;order:Archaeoglobales;family:Archaeoglobaceae;genus:Archaeoglobus;species:Archaeoglobus fulgidus; 972.3909 948.7257 1084.7329 1042.1625 1358.2422 1200.3318 872.804 781.234 948.1885 1058.3561 1794.3496 1218.5674 224602458 sigma_24 Stress Sigma factors Lutiella nitroferrum 2002 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Lutiella;species:Lutiella nitroferrum; 2546.0114 3465.5545 3793.8752 3344.4699 1616.9071 3997.0081 3399.5461 2206.6573 3158.7023 3104.8201 3222.4921 6418.28 159173974 SMR_antibiotics Antibiotic resistance transporter Vibrio campbellii AND4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 960.9331 2043.9313 1041.6814 2357.1253 1576.8265 2716.9069 771.0785 1457.0723 883.188 1408.2502 988.1249 152145946 fccAB Sulphur sulfide oxidation Beggiatoa sp. SS superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Thiotrichales;family:Thiotrichaceae;genus:Beggiatoa; 628.1748 471.551 610.3676 841.5569 431.2913164 308.3090546 562.0498 389.7606151 344.2057306 817.5279 158111894 tfdA Organic Remediation Aromatics Chlorinated aromatics Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 3681.1076 1484.6861 2478.7933 2841.5515 2404.107 2273.61 2010.2606 1563.9204 1953.0141 2116.8908 2873.6789 2479.4442 164415622 mer Metal Resistance Mercury Sphingomonas sp. Seq21_b superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 2303.430629 2341.05585 2613.77785 2262.52975 2495.2076 2019.2559 1609.3532 2547.8949 1927.67765 2294.7277 4629.469 2712.07705 156049759 ppx_fungi Fungi function phosphorous Sclerotinia sclerotiorum 1980 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Sclerotinia;species:Sclerotinia sclerotiorum; 499.4694212 1046.5843 18863.82273 537.7777169 1487.6789 1109.5023 669.976 1773.0662 1355.2039 1411.1361 112462647 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 4213.4296 4681.3472 6870.3431 1932.7619 3318.3548 3679.3665 4530.1435 7848.7492 4221.0736 4746.9024 4065.083 6484.2227 158112900 CopA Metal Resistance Copper Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 751.7965801 780.1903742 704.0380243 1141.0797 1095.487 506.8003663 709.0949039 91693002 chnB Organic Remediation Other Hydrocarbons Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 704.0847851 1174.3666 1241.6575 806.6472 1551.2502 1274.2757 639.0867 591.9021969 877.5377 1063.7272 1257.8802 897.5295588 120593097 pimF Organic Remediation Aromatics Aromatic carboxylic acid Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 1198.3758 1030.3758 965.8144 1495.6738 1348.9141 1530.4919 1293.4517 2455.4485 1053.6346 1298.2338 1534.8598 1569.4427 209516468 bphC Organic Remediation Aromatics Polycyclic aromatics Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1067.7064 904.0461 1057.9055 1402.8729 1318.2962 569.2208053 852.8063 189915441 katE Stress Oxygen stress Actinobacillus pleuropneumoniae serovar 7 str. AP76 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Actinobacillus;species:Actinobacillus pleuropneumoniae; 2067.6335 1989.3168 3031.2792 1626.3893 2069.6798 2641.6992 2052.2531 3145.0773 2431.0398 2360.6209 1504.6129 2762.976 167734390 cat_bac soil_benifit Xanthomonas campestris pv. campestris superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas campestris; 13814.1641 10570.6249 13624.7193 13967.2428 7897.8221 15977.0545 15792.565 7880.6561 12167.6285 15650.4155 13796.1045 8968.3771 94313299 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 3370.8619 2820.6538 2577.0947 3172.5796 2332.7054 2668.3065 2363.8648 1842.3429 3345.7609 3072.7389 2628.7241 3572.5941 227823030 fnr Stress Oxygen stress Rhizobium sp. NGR234 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium fredii; 2639.7151 4004.9596 3030.4795 2237.1483 4176.3686 2735.9837 2244.7924 2880.0301 3314.4835 3112.5808 2427.5661 2169.5325 169008377 ara Carbon cycling Carbon degradation Hemicellulose Paenibacillus sp. JDR-2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 553.521297 425.8700001 504.8546 631.5518 1653.2715 546.3083 1260.6583 631.6251 560.7791 562.3809 251854620 pcc Carbon cycling Carbon fixation Corynebacterium matruchotii ATCC 14266 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium matruchotii; 1896.3717 3137.2341 2758.373 2460.4042 3002.7544 3106.6902 2247.2699 1941.6827 3191.9134 3385.1092 2423.3137 3217.5167 77019723 ArsC Metal Resistance Arsenic Rhodococcus erythropolis PR4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus erythropolis; 18492.5258 6054.7016 10610.873 13754.2874 10006.2931 7698.3454 8738.2374 7621.7699 8694.0439 9137.4275 19430.6188 7146.9047 261500196 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria; 1339.73735 1143.02635 1842.9525 1679.74805 1670.7522 1180.0436 971.8036 978.24915 1085.2207 1137.5988 960.9486 171689850 sulfate_transporter Fungi function Sulfur Podospora anserina superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Lasiosphaeriaceae;genus:Podospora;species:Podospora anserina; 899.7893 989.3859 569.0884271 472.5057925 469.6241603 695.6808 38427002 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 4415.4289 2676.8923 4111.7665 4056.7412 4132.591 2865.1462 3734.9585 2971.2479 2617.1432 3124.9532 3676.9656 4167.6854 260645656 sigma_38 Stress Sigma factors Streptomyces scabiei 87.22 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces scabiei; 820.7805 1073.1398 879.7843 794.5386 1063.0032 1796.3294 818.3457 1104.191 757.5766 956.3472996 928.6501 148843592 mer Metal Resistance Mercury Planctomyces maris DSM 8797 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Planctomyces;species:Planctomyces maris; 1318.5815 1140.9684 1339.4937 1145.5514 811.7904 1515.5954 2171.0044 2883.0319 939.0595 1510.7536 1359.5763 1618.0552 178468917 Tet Antibiotic resistance other Streptomyces griseus subsp. griseus NBRC 13350 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces griseus; 4329.1757 2831.88 3175.5254 4339.1567 4239.902 3269.1155 3175.2916 2370.065 2999.2982 3298.96 4701.1104 4136.3344 85698453 sigma_32 Stress Sigma factors Nitrobacter sp. Nb-311A superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter; 452.1337327 956.1582 396.2718635 30171249 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria; 1551.4706 609.1466289 617.246794 1571.0513 1108.22084 1164.8475 998.4209 494.2629157 898.017 605.3885555 62085674 gyrB other category gyrB Gordonia amarae superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Gordoniaceae;genus:Gordonia; 1324.7335 701.8345 1151.6194 892.2231 577.7966471 537.497 964.5327 218675983 hly virulence hemolysin Vibrio splendidus LGP32 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio splendidus; 3141.3442 8037.405 5466.2214 5501.4876 4257.8377 7357.2373 5340.6068 5196.1342 8646.3415 7865.9486 2661.854 8762.5841 91203235 groEL Stress Heat shock Candidatus Kuenenia stuttgartiensis superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;genus:Candidatus Kuenenia; 4954.5566 4167.0704 4255.1258 5160.8165 4987.9315 5255.7143 5179.4731 4659.0434 4610.7655 4093.5869 6350.6637 5460.998 302667037 tre_fun soil_benifit Trichophyton verrucosum HKI 0517 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Trichophyton;species:Trichophyton verrucosum; 2132.4444 1403.8601 2438.388 1191.5477 1672.5723 1350.9716 1373.8924 3344.3258 1595.5199 1171.2377 2027.4165 163761255 fnr Stress Oxygen stress Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 4370.7889 2845.5528 3109.269 3639.4735 2916.0903 3325.6652 3548.8081 6747.1394 2456.8655 2639.0452 4559.8457 3755.097 149917477 phdCI Organic Remediation Aromatics Polycyclic aromatics Plesiocystis pacifica SIR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Nannocystaceae;genus:Plesiocystis;species:Plesiocystis pacifica; 5399.4477 7598.1181 4629.8084 3566.1506 8217.543 5565.5488 4288.7066 4758.589 7668.0987 5695.7938 2139.8234 4210.1458 315043963 cah_fungi Fungi function carbon degradation Arthroderma gypseum CBS 118893 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma;species:Arthroderma gypseum; 1702.7183 4236.1223 2335.8701 2053.122 3996.6322 2891.8431 5347.3398 1358.2688 3565.6579 2552.7285 3097.372 1686.7306 146415008 ABC_multidrug_fungi Fungi function metal resistance Meyerozyma guilliermondii ATCC 6260 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Debaryomycetaceae;genus:Meyerozyma;species:Meyerozyma guilliermondii; 717.513 648.7617 589.2708 749.8025 558.0919157 1037.757 1283.6332 533.3627 981.8888 1056.7035 762.94926 807.572 169185875 nmoA Organic Remediation Aromatics Nitoaromatics Paenibacillus sp. JDR-2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 603.2546644 973.10435 1008.0225 823.96095 757.659639 727.9076 762.00165 862.6594 811.1038 918.70845 1036.1057 264675172 amyA Carbon cycling Carbon degradation Starch Caulobacter segnis ATCC 21756 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter;species:Caulobacter segnis; 6946.9424 7093.2836 6972.2649 6817.9567 9973.1201 7809.68 6129.4602 6115.1511 6269.1314 7281.8651 10415.9629 8370.4844 108461668 vanA Carbon cycling Carbon degradation Others Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 2064.1008 5253.2841 3387.9328 2106.2547 6155.346 2899.7101 3293.2744 3013.9275 3379.2982 3482.8826 2554.1997 2012.6679 104774139 sigma_70 Stress Sigma factors Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus delbrueckii; 8170.1008 5168.3677 7304.2014 8214.1728 5982.9848 4781.1513 5774.5255 3567.9764 4466.4585 5491.7716 7102.4896 6688.1206 209976908 srt virulence surface protein Streptococcus sobrinus superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus; 1025.9589 718.1064 428.2076575 475.9642 447.191 640.2842 1034.2832 209873331 gyrB other category gyrB Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 1547.4947 1030.2611 1757.2277 1418.2554 616.5235859 791.3195 1798.3802 1166.5361 928.3116 1166.418412 1345.8526 66866394 pilin virulence pilin Neisseria mucosa superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Neisseria; 1358.2739 14878.83928 1055.1741 1213.1898 3450.8061 1220.1041 2343.5166 1222.0231 1257.8871 1064.252 1872.2614 1006.7185 219675075 exaA Organic Remediation Chlorinated solvents gamma proteobacterium NOR5-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 2535.756981 2964.16045 4353.499666 1940.9598 2383.5265 2828.16675 2484.13585 5990.7797 2800.8761 2911.8192 3991.4957 3944.562695 93357652 catB Organic Remediation Aromatics BTEX and related aromatics Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 1213.2454 1286.9216 1113.6519 1408.9274 1651.167 1587.7446 1414.2102 1034.6732 1325.6839 1543.0805 1482.9186 1588.2148 296440342 phzF soil_benifit Clostridium lentocellum DSM 5427 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Cellulosilyticum;species:Clostridium lentocellum; 869.4189 1960.9391 1135.214 1970.6541 1194.3792 1175.8016 1349.6264 1058.1195 1327.7653 1208.413415 888.2083 256826579 hly virulence hemolysin Cryptobacterium curtum DSM 15641 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Coriobacteriales;family:Coriobacteriaceae;genus:Cryptobacterium;species:Cryptobacterium curtum; 1701.9661 905.7918 1155.9473 1548.3271 1415.8602 1410.5724 1093.3306 1399.6412 792.0461 1029.8816 1978.9787 1481.4732 83026002 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 545.8782758 1297.5234 1542.4068 728.1193 1060.1793 1088.6383 1042.9304 2228.9413 1098.7393 1915.7273 614.2129541 1602.5239 220708160 nagI Organic Remediation Aromatics Aromatic carboxylic acid Geobacillus sp. Y412MC61 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 1642.461 1149.3403 948.1635 1366.5199 1629.1076 1329.8458 1451.3623 1838.6269 1156.73355 1327.65735 1450.7017 1212.2093 198248454 ABC_antibiotic_transporter Antibiotic resistance transporter Acidithiobacillus ferrooxidans ATCC 53993 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus;species:Acidithiobacillus ferrooxidans; 2906.4402 17997.17115 1915.2574 2862.5088 2037.0125 1581.6873 1900.4103 1207.9338 1425.5502 1720.2251 2227.4411 1998.9768 227342062 fnr Stress Oxygen stress Rhizobium sp. NGR234 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium fredii; 3858.9513 1911.6509 3018.0192 3823.623 2889.0351 2464.7364 2352.4634 1843.9891 2580.8451 2723.5194 3129.8773 2857.1936 17385460 narG Nitrogen Denitrification Pseudomonas sp. Lgg10.5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 2117.1315 2516.9605 2822.0851 1750.8313 1528.9159 2694.6445 2069.1258 2399.5268 2654.0704 2353.3627 943.302 2174.5998 217415750 pulA Carbon cycling Carbon degradation Starch Bifidobacterium angulatum DSM 20098 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium angulatum; 2056.7131 1658.8386 1620.038 1843.454 2742.1745 1824.62975 1485.61815 1529.70165 1509.2362 1687.0272 2455.7229 1982.1615 99036457 nreB Metal Resistance Nickel Silicibacter sp. TM1040 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 2323.0755 892.5354 2234.1074 1325.5939 810.6927 583.3323246 763.7509 638.5311 906.9046704 268311449 fnr Stress Oxygen stress Thermomonospora curvata DSM 43183 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Thermomonosporaceae;genus:Thermomonospora;species:Thermomonospora curvata; 1066.1349 2061.618 1484.1325 1002.2616 681.9164265 1495.5241 1639.9214 1573.1076 1407.4012 2080.4547 1064.8425 1850.1731 119961510 sped_bac soil_benifit Arthrobacter aurescens TC1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter aurescens; 2710.4495 1796.0886 2863.3045 3121.7618 1056.480358 1280.7368 1215.4427 1858.9742 1825.5631 1847.8911 1542.1873 2370.8762 90336675 catechol_B Organic Remediation Aromatics Other aromatics Aurantimonas sp. SI85-9A1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Aurantimonas;species:Aurantimonas manganoxydans; 5394.6658 3173.9157 4116.6518 4940.1904 2120.8326 3238.2008 2627.3245 3373.0613 4025.255 3719.254 3377.9313 4829.5571 83765536 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Aspergillus oryzae superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus; 658.4781 1520.6456 1476.9064 975.1405 942.0804 1096.0267 1366.8153 1303.9812 1343.8912 1136.5324 962.5456467 1319.7611 114338082 pstB Stress Phosphate limitation Syntrophomonas wolfei subsp. wolfei str. Goettingen superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Syntrophomonadaceae;genus:Syntrophomonas;species:Syntrophomonas wolfei; 2420.0567 2161.698 2954.1327 2456.0621 2404.9981 2660.7386 1644.8154 2185.9469 1907.6881 1949.6063 3922.2568 2583.3157 197301741 Al Metal Resistance Aluminum Ruminococcus lactaris ATCC 29176 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Ruminococcus;species:Ruminococcus lactaris; 677.337 545.4209514 732.0922 812.1126 690.4494 627.3967276 843.5205 740.031 523.2935 805.9497 735.0807227 843.0289 11066440 dsrB Sulphur sulfite reductase Desulfobulbus propionicus superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobulbaceae;genus:Desulfobulbus; 1774.9035 1118.6562 1599.1835 1780.0892 532.5745565 906.9853 1462.9708 1062.6742 1411.0261 865.8108 16152123 dsrB Sulphur sulfite reductase Desulfomusa hansenii superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfofaba; 1116.3717 738.4693 1364.618 1211.2995 562.1113302 704.501 927.735 999.2561 779.4653 853.5634 849.5517 167072369 Catechol Organic Remediation Aromatics Other aromatics Rhizobium leguminosarum bv. trifolii WSM1325 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 3081.6376 1725.342 2547.5505 3263.7914 1367.7599 2735.3405 3180.0059 3130.4675 2134.0152 2254.7742 2381.3427 5284.9767 261202730 p450aro Fungi function organic remediation Ajellomyces dermatitidis SLH14081 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces dermatitidis; 1101.280105 1920.9657 1680.0666 881.9549078 2230.1912 1313.9847 1451.6835 1261.8825 1458.7148 1421.69 1411.049011 193073104 fnr Stress Oxygen stress Sinorhizobium meliloti 1021 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium meliloti; 914.2962 1627.0969 750.5743116 925.487 880.386 1411.9334 1224.3206 660.5544 1346.0346 1425.4085 1344.6853 154277942 tre_fun soil_benifit Ajellomyces capsulatus NAm1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces capsulatus; 1777.76136 2222.8496 2517.4828 1898.7235 2814.765661 2466.4414 1742.0064 2208.7392 1689.0375 2164.1249 2876.945993 2534.8954 1304102 endoglucanase Carbon cycling Carbon degradation Cellulose Humicola grisea var. thermoidea superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;genus:Humicola;species:Humicola grisea; 1805.7575 1817.2285 2515.1759 1608.1305 2066.286 1177.359 1188.0174 2983.6669 1352.6046 1880.7428 3376.682 1975.5906 57225532 rd Organic Remediation Chlorinated solvents Dehalococcoides ethenogenes 195 superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides;species:Dehalococcoides ethenogenes; 834.5352 406.3983 746.7044 940.2392 779.4644 531.5764 727.5336 1443.599831 580.4432 589.9459 837.0172 965.3292 146866149 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Shewanella baltica OS223 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella baltica; 1679.0372 1193.9902 1482.3733 954.6353 21736.58938 956.7388 947.4523 2000.461 948.8059 1276.9728 1381.702864 1490.5366 67923821 ahpC Stress Oxygen stress Crocosphaera watsonii WH 8501 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Crocosphaera;species:Crocosphaera watsonii; 1092.2204 989.2173 1094.1254 973.0433115 1300.0604 982.5282 1234.079 818.4426 866.8515 1169.5979 92117693 ahpC Stress Oxygen stress Nitrobacter hamburgensis X14 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter hamburgensis; 483.4311658 677.802 394.9373346 579.8025 633.5885854 964.4397 355.8312655 759.5922 800.7349 206677631 rd Organic Remediation Chlorinated solvents Rhodobacterales bacterium HTCC2083 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 3820.019611 3254.3594 3986.4289 4153.672301 3943.28955 3677.62405 3173.1983 4213.5699 3501.8858 4359.77275 3302.505766 4217.0738 116249469 fnr Stress Oxygen stress Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 2254.6245 1638.5779 1697.3832 1297.0871 2905.1886 1599.9938 1841.5336 1282.3993 1387.8892 1442.5266 1922.8091 1728.7791 23392985 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2829.7015 4530.0039 2059.8525 2073.6957 5505.7543 1945.3045 3669.0849 2425.8536 2607.032 2108.0358 3572.8189 1537.0755 83575287 phn Organic Remediation Herbicides related compound Rhodospirillum rubrum ATCC 11170 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum rubrum; 1661.1856 1153.8384 1718.669 1616.9243 636.1861065 1571.7413 1076.2285 1236.5362 886.2278 1364.1716 1421.9442 889.7738 21224836 narH Stress Oxygen limitation Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 2679.0045 511.4704945 1419.7371 2342.6466 1207.3432 1487.6312 4754.536101 621.2494 1052.3262 2055.5691 1060.8239 118593579 glnA Stress Nitrogen limitation Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 2377.1002 950.4417 1486.8514 1931.9537 1139.4747 1372.4127 1031.284 1596.0441 1898.2294 2002.4987 1779.7673 111620691 INF1_elicitin_Oomycetes soil_borne_pathogen oomycete elicitor Phytophthora porri superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 766.2095182 1400.152 1574.161 1045.6554 1284.3758 958.3619993 1068.4517 2077.7347 1526.7795 1895.6835 1655.8603 281327589 iro virulence Iron oxidation Burkholderia sp. CCGE1001 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 3857.2185 4330.5574 4072.539 3967.5155 1739.0444 3983.8017 3966.5538 4164.717 4489.9311 4439.0322 3412.815 3617.7598 296115793 cat_bac soil_benifit Gluconacetobacter hansenii ATCC 23769 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter;species:Gluconacetobacter hansenii; 2069.5812 1071.8783 1664.0441 1587.0363 843.2428333 1407.1474 1901.4082 1770.843 1323.5288 1942.8059 846.0503556 1569.6486 152028228 TerC Metal Resistance Tellurium Anaeromyxobacter sp. Fw109-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter; 1010.055 1253.0392 689.1716 1031.9441 442.0408008 1372.5385 847.7186 842.6026 830.7672 725.1939 830.0499712 906.4861 119857783 ArsC Metal Resistance Arsenic Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1688.4532 860.492 961.0745 1292.0327 1071.9022 1285.4225 1115.7476 966.5122 1365.5228 690.9706 261281857 obgE Stress Radiation stress Geobacillus sp. Y412MC10 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 9091.14 7713.0305 10303.0575 8617.3184 7959.1372 7817.7564 7214.8535 12399.8104 8438.5827 7248.0754 11887.4459 8904.1097 7634689 movement_Furovirus soil_borne_pathogen virulence movement protein Soil-borne wheat mosaic virus superkingdom:Viruses;family:Virgaviridae;genus:Furovirus; 1239.4115 1336.6303 2456.4752 1975.594 1273.6447 2737.5092 994.7211 1338.4541 3200.5389 2659.0431 2476.0248 255319948 sid_bac soil_benifit Acinetobacter radioresistens SK82 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter;species:Acinetobacter radioresistens; 2242.9384 4014.5293 2863.4935 2733.0945 2903.1599 3549.7553 5239.1871 1968.7357 3964.3893 2540.4231 3901.4755 2483.9759 34483866 dmsA Organic Remediation Others Wolinella succinogenes superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Helicobacteraceae;genus:Wolinella; 1046.3088 2738.4898 1484.3506 856.8076 2231.5942 1520.6955 2239.7455 955.826 1786.5391 10775.44275 2152.7726 1306.6879 27355843 dehH109 Organic Remediation Chlorinated solvents Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 1265.6716 1059.2015 1160.5228 1202.5085 909.9555 732.9475 1981.3242 871.9928 832.1462 1091.539528 306880437 sod_CuZn soil_benifit Sphingobium chlorophenolicum L-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingobium;species:Sphingobium chlorophenolicum; 2617.5249 2758.725 3601.5178 2044.972 1480.3037 3641.1232 2612.7114 2680.2854 3210.3537 2563.7387 3835.624 3369.1356 163738738 B_lactamase_A Antibiotic resistance Beta-lactamases Phaeobacter gallaeciensis BS107 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 2680.08585 2728.0218 2925.8461 3935.5911 1799.8098 2720.379289 3069.4673 3236.90035 2541.9435 2963.60365 2891.8896 2247.1203 257462380 obgE Stress Radiation stress Fusobacterium sp. D12 superkingdom:Bacteria;phylum:Fusobacteria;class:Fusobacteria;order:Fusobacteriales;family:Fusobacteriaceae;genus:Fusobacterium; 754.1338133 819.5764732 684.2152493 1729.9053 46203066 sped_bac soil_benifit Magnetospirillum magnetotacticum MS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magnetotacticum; 1003.0031 705.2844972 701.4447141 626.170321 500.6882155 585.6951482 691.1919066 1727.1047 261823743 proV Stress Osmotic stress Pectobacterium wasabiae WPP163 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium wasabiae; 1180.4661 549.8863107 222353926 APS_AprA Sulphur adenylylsulfate reductase uncultured bacterium superkingdom:Bacteria; 8892.6912 21776.3516 14404.1957 15416.1122 15998.8145 18856.125 20171.4391 16565.3264 20628.1811 20255.437 11480.1087 19624.4461 209401604 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 5714.2067 6431.3206 7599.9054 5532.17 8116.5014 7753.564 5249.8429 6946.6662 10241.6516 6452.6892 4559.5814 5086.1598 116103011 sigma_70 Stress Sigma factors Pediococcus pentosaceus ATCC 25745 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Pediococcus;species:Pediococcus pentosaceus; 861.0237 401.3787479 919.6225 1097.8703 1012.78 978.8233 827.2907 506.9718679 1151.2275 60417318 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 1574.062278 1728.985964 1390.33396 1252.65099 1591.761156 1602.93866 1719.169173 1494.394833 1568.63644 1601.922609 1222.179633 1407.606914 1009366 narG Nitrogen Denitrification Bacillus subtilis superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 453.073999 717.7244 516.9967141 405.7474728 913.186 640.0693 442.9917 399.322157 533.1019 497.2755 426.2232048 148553819 nahA Organic Remediation Aromatics Polycyclic aromatics Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 2247.437775 3122.7352 3238.08885 1672.4404 2627.72525 1980.1153 2890.2106 3048.526297 2308.7959 2113.3455 2394.6043 2498.434518 156446969 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 598.7984 785.57 918.0522 734.5482 730.6764 830.1352 857.1753 677.569 728.2926628 221179274 proV Stress Osmotic stress Burkholderia multivorans CGD2M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 3451.59 1227.5031 2232.0873 3041.8641 1840.5917 1255.0569 1762.0449 1587.9474 1265.2958 1969.114 1569.3832 1745.2579 26278890 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3354.8506 2980.8405 2274.8188 2183.7553 1977.6881 1906.7921 1578.6015 1540.4866 1869.7125 1796.5366 3153.6376 1655.9564 182415001 sigma_24 Stress Sigma factors Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 3047.519309 1906.9361 2012.4393 1762.8852 1347.3215 2011.6207 1599.9935 2004.7822 1976.8012 1752.5296 2273.5203 2003.8655 240168517 proV Stress Osmotic stress Mycobacterium kansasii ATCC 12478 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium kansasii; 1316.0025 2147.59205 1317.1465 988.1463 1504.14525 1670.2734 2658.972036 1122.6289 1641.0129 1452.381 1841.1255 1084.883 121609632 bphA Organic Remediation Aromatics Polycyclic aromatics Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 1556.2794 1633.8377 1654.6371 1774.9116 1390.7957 1636.7563 2489.6129 1307.2735 1620.367 1559.7297 1969.0565 1642.9519 145016007 nagG Organic Remediation Aromatics Aromatic carboxylic acid Magnaporthe grisea 70-15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe;species:Magnaporthe oryzae; 1543.062 1235.7093 1427.5594 621.49095 852.021083 953.0371 835.70355 1241.7531 655.8118 1080.4824 1579.7968 14520785 gdh Nitrogen Ammonification Pyrococcus abyssi GE5 superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Pyrococcus;species:Pyrococcus abyssi; 718.6682 443.6331664 398.2959667 505.0269841 734.7276 498.8746 349.0649398 446.4804 469.2812 892.9224 745.3919 113527010 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 794.0906 521.0826102 860.912 950.0055 891.7412407 955.3628 928.5493 819.4714 587.2112 720.37 657.0247934 808.4508 221215639 vanA Carbon cycling Carbon degradation Others Burkholderia multivorans CGD1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 510.7631 837.5172 482.4131 1112.5662 540.5223 111619185 ZntA Metal Resistance Zinc Acidovorax avenae subsp. citrulli AAC00-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax citrulli; 2001.7078 1572.7117 2543.7412 1600.8753 1353.0283 1853.7721 1699.4633 2222.7197 1458.2255 1439.6345 2383.2887 2140.5298 91807182 nosZ Nitrogen Denitrification uncultured alpha proteobacterium superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 1935.097 1210.8613 867.6874 1645.6891 1002.0873 1313.6257 2770.5761 1971.5802 911.9253 1664.9288 1010.2106 551.6403235 193084263 pimF Organic Remediation Aromatics Aromatic carboxylic acid uncultured marine group III euryarchaeote KM3-28-E8 superkingdom:Archaea;phylum:Euryarchaeota; 3493.0286 2413.6948 2280.3584 4236.6718 3700.6738 1944.086327 5821.4043 2318.5734 1681.443299 2609.5434 1414.376321 2956.4236 258511883 pstS Stress Phosphate limitation Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Alicyclobacillaceae;genus:Alicyclobacillus;species:Alicyclobacillus acidocaldarius; 3132.5998 1761.276 1833.5891 2169.5784 1695.3427 1574.3437 1273.0691 1881.9723 2035.7448 1374.8021 4117.6008 1802.7278 85689736 ahpC Stress Oxygen stress Erythrobacter sp. NAP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 3883.5995 2810.7911 4611.2996 4346.1151 892.7271348 2699.0566 2150.1515 2986.5961 3318.4674 2307.893 2224.6267 212680082 dmsA Organic Remediation Others Providencia rustigianii DSM 4541 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia rustigianii; 726.4186 1165.8164 873.7649 666.37775 1507.7381 1469.2908 816.7949 657.4799 1141.223 704.07815 1156.9528 1254.2578 45188005 phenol_oxidase Carbon cycling Carbon degradation Lignin Ashbya gossypii ATCC 10895 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Eremothecium;species:Eremothecium gossypii; 1657.344 2668.3675 1318.6732 2102.529 1993.0264 2531.6808 1891.5438 1416.9261 2296.0403 2330.4157 1716.3417 1957.5326 145222379 chnB Organic Remediation Other Hydrocarbons Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 4676.3603 2188.1771 2243.7043 2971.9109 2502.4881 1929.5705 2068.6326 2356.2177 2422.4313 2167.4525 3888.286 2913.9769 227547780 pcc Carbon cycling Carbon fixation Corynebacterium lipophiloflavum DSM 44291 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium lipophiloflavum; 355.7564442 673.495 717.6399 494.8634359 1124.9521 762.3687 648.559 750.1682 859.0126 1024.6667 87281169 nirK Nitrogen Denitrification nitrifying uncultured bacterium superkingdom:Bacteria; 3664.2098 1153.4561 2170.7743 2614.0904 1493.3668 1533.5778 1999.708 1896.5579 1615.6026 2289.9708 2359.2401 1805.4468 114340168 CopA Metal Resistance Copper Maricaulis maris MCS10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Maricaulis;species:Maricaulis maris; 4056.5941 3055.97055 4374.86575 3973.7958 2801.50835 3493.3327 3466.5781 6320.49405 3230.8325 3718.73475 3533.9591 3427.40885 261500176 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria; 2303.3972 3426.7917 2546.998 1622.3896 4351.5737 2535.7339 1621.4773 2567.7641 2248.9437 2378.9786 3325.4616 1734.8351 196480093 AceB Carbon cycling Carbon degradation Others Phenylobacterium zucineum HLK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Phenylobacterium;species:Phenylobacterium zucineum; 8797.2145 5729.9958 3858.2561 8331.1223 8454.3603 5318.1868 8275.2646 4355.2867 6222.1046 5712.1526 7651.4999 6044.9524 90580479 endochitinase Carbon cycling Carbon degradation Chitin Vibrio angustum S14 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Photobacterium;species:Photobacterium angustum; 1342.3566 955.2329 1180.6644 1180.1103 1909.813 1111.8504 1217.5532 986.2319 1036.9883 965.7862 1784.707621 1174.084399 7210994 TerZ Metal Resistance Tellurium Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 4824.3305 3136.185 5069.9332 5150.5022 1897.3755 5463.3076 6524.0361 3948.4621 4637.7211 6386.4722 3363.6367 4432.7609 113932190 ArsC Metal Resistance Arsenic Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 3665.4724 2091.8434 3772.7057 4366.6477 1252.9409 2275.8535 1606.1989 2693.3701 2577.665 2316.8708 2815.8757 1887.1268 116255227 atzA Organic Remediation Herbicides related compound Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 818.0941 1768.0805 1501.3909 868.697 1973.9152 1124.3539 1251.9409 1042.888 1378.6516 1208.2992 86138370 oxyR Stress Oxygen stress Roseobacter sp. MED193 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 770.6243 450.4122227 679.6192 834.4532 1065.4501 545.9942 539.3875 1127.4646 519.9153 688.3335 1354.2909 820.9061 4895143 endochitinase Carbon cycling Carbon degradation Chitin Streptomyces lavendulae superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 3970.9497 1669.1983 2201.4526 4088.0537 2025.1059 1320.8047 1642.3531 2100.2123 1669.3392 1856.4111 15975.62296 2236.9858 198267410 pimF Organic Remediation Aromatics Aromatic carboxylic acid Octadecabacter antarcticus 238 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Octadecabacter;species:Octadecabacter antarcticus; 420.7019759 736.4178 909.3285 595.2933 1019.8939 447.7269 414.8336 38524456 HcaB Organic Remediation Aromatics Aromatic carboxylic acid Rhodococcus opacus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 3272.341397 3663.124227 3391.891302 4899.535655 2865.4936 4286.373426 6166.582551 2604.085215 5259.403576 3465.830672 6017.01 3101.303196 34498442 fnr Stress Oxygen stress Chromobacterium violaceum ATCC 12472 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Chromobacterium;species:Chromobacterium violaceum; 4661.9071 6442.3683 5986.9385 4503.2805 5776.8947 2990.6294 4573.3633 2821.4091 3686.9233 2971.1689 5787.0465 3638.1935 24981380 CadA Metal Resistance Cadmium Pseudomonas putida KT2440 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 2940.2224 2634.192 2956.7789 2388.2046 4297.7855 2884.8735 1913.3372 2322.7131 2368.2171 2464.8486 5408.707 3291.9598 196257358 sigma_70 Stress Sigma factors Cyanothece sp. PCC 7822 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 1379.4566 2304.5166 1445.7919 1393.5588 2325.0837 1423.9882 3305.7311 907.0337 1971.664 1339.0806 1705.7468 865.7147 120593543 sox Sulphur Sulphur oxidation Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 4084.6004 5125.1322 5786.788 3011.8118 3667.0207 5292.2376 4190.0283 5962.0079 5758.5585 5134.7355 2742.5767 5992.5497 1322105 gyrB other category gyrB Acinetobacter sp. superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter; 698.0631 621.9077884 81168530 nitA Organic Remediation Aromatics Other aromatics Synechococcus elongatus PCC 7942 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus;species:Synechococcus elongatus; 718.0369 523.5928998 808.3594 5655.984033 807.5742 914.8672 802.7339996 685.173233 17431979 norB Nitrogen Denitrification Ralstonia solanacearum superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 2396.0129 2490.7745 2751.2632 2984.9098 2763.5609 2650.2093 2373.1442 2276.5474 3793.5227 2934.3196 2732.7025 3392.4394 220903841 pstC Stress Phosphate limitation Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio desulfuricans; 603.6106223 1101.5939 1464.4315 968.3149 697.1834 1005.1872 1413.2606 1138.1962 775.1198143 72162050 cat_bac soil_benifit Thermobifida fusca YX superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiopsaceae;genus:Thermobifida;species:Thermobifida fusca; 5115.2472 2391.0258 3847.206 4817.9126 3022.5481 3058.9049 3057.4924 1696.789 3783.0969 3669.7197 5441.909 3063.4672 187728412 fnr Stress Oxygen stress Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 897.6804 547.7273596 791.5878 832.289 594.475201 961.9585 1417.5022 1497.2864 726.1714 558.4676 870.8198 1944.5006 159177691 phzF soil_benifit alpha proteobacterium BAL199 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 4315.6762 3684.4461 4124.4159 5056.1811 3575.484 3856.6882 2887.8707 3491.5258 3862.1815 3950.5559 4336.7292 4129.5095 260905495 fnr Stress Oxygen stress Brevibacterium linens BL2 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Brevibacteriaceae;genus:Brevibacterium;species:Brevibacterium linens; 647.8031351 829.5678989 1241.6979 965.563 599.2506 1090.334685 764.1935 738.7053 169002386 ara Carbon cycling Carbon degradation Hemicellulose Paenibacillus sp. JDR-2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 1764.8292 1435.5253 1661.4416 418.5272443 1245.888 1870.7026 1239.0943 2498.0071 1560.3983 1628.4033 1459.9134 116754044 grpE Stress Heat shock Methanosaeta thermophila PT superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanosarcinales;family:Methanosaetaceae;genus:Methanosaeta;species:Methanosaeta thermophila; 1600.88135 1115.4451 1361.4629 1144.94185 1160.44479 619.2605665 701.1424377 1260.7326 689.85 1621.9689 46392598 pmoA Carbon cycling Methane Methane oxidation uncultured bacterium superkingdom:Bacteria; 3004.9258 1559.5486 2226.9548 2714.3289 2852.9551 2097.2754 1788.8394 2299.0492 1500.9305 1924.6939 4242.6729 3134.3399 19068022 chitin_synthase Fungi function major biomolecule Glomerella graminicola superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Glomerellaceae;genus:Glomerella; 2684.8341 4852.1229 6338.954 4246.5888 9317.1329 2601.8706 6111.8534 2927.1157 3548.5223 3552.3156 3192.6776 2878.0943 110595373 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Acidovorax sp. JS42 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax; 2355.5682 2060.8152 2918.1184 2267.4609 1415.1777 2677.2653 2117.1173 1807.4221 2221.0677 2425.8553 2012.7171 2391.6533 257093877 fnr Stress Oxygen stress Candidatus Accumulibacter phosphatis clade IIA str. UW-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;genus:Candidatus Accumulibacter;species:Candidatus Accumulibacter phosphatis; 913.8395 1811.762 1324.9833 1150.0579 1855.7404 1539.8994 1378.4461 1418.766 1421.7527 1256.9961 1227.3561 152983107 czcC Metal Resistance "Cadmium,Cobalt,Zinc" Janthinobacterium sp. Marseille superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Janthinobacterium; 864.4086 857.9053 983.9161 994.6732 609.75656 946.2544 1055.3642 814.9323 1123.1904 940.0699 858.9515664 640.0236 109660081 ureC Nitrogen Ammonification unidentified bacterial contaminant superkingdom:Bacteria; 2545.1786 2365.1584 1264.0047 2478.0466 1633.1554 1575.6449 1208.6638 1543.9605 1786.6673 1270.8871 3274.3853 1168.6091 146295090 gyrB other category gyrB Caldicellulosiruptor saccharolyticus DSM 8903 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacterales Family III. Incertae Sedis;genus:Caldicellulosiruptor;species:Caldicellulosiruptor saccharolyticus; 576.9204938 580.9331 811.376 650.8242 888.1974 614.165 578.9597 506.5544998 526.1825 539.708 1054.2957 848.4532 85086358 Catechol Organic Remediation Aromatics Other aromatics Neurospora crassa OR74A superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Sordariaceae;genus:Neurospora;species:Neurospora crassa; 1991.2575 2422.9587 2027.0369 1903.006267 1219.48995 3132.9385 2321.042633 2045.771367 2095.5446 2467.1768 2174.5389 1121.81615 187919853 dehH Organic Remediation Chlorinated solvents Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 565.7415 688.1763143 728.3114 1027.2277 157011532 AprA Sulphur adenylylsulfate reductase uncultured bacterium superkingdom:Bacteria; 984.9904 1204.8914 1019.85765 1097.6306 1651.7547 854.54245 1032.0452 665.54135 1026.87705 844.4348 837.6657697 804.8255 1771489 napA Nitrogen Dissimilatory N reduction Pseudomonas sp. superkingdom:Bacteria;phylum:Proteobacteria; 2798.2027 3414.8901 3029.5345 3750.4919 2249.865 3934.7002 8404.4537 2464.5993 4927.6399 3406.0798 2843.456 2951.8644 23011557 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magnetotacticum; 4545.2879 3564.1437 4518.5959 3570.9036 2968.1722 3414.6402 3319.7248 5679.252 3414.8624 3596.8809 4650.3464 4365.6235 187920224 MFS_antibiotic Antibiotic resistance transporter Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 3021.9445 2644.2076 4506.6299 3381.9874 6186.1742 2037.5699 4159.9075 2509.482 2427.7082 2366.1818 62938.49702 2861.4232 99036128 gyrB other category gyrB Silicibacter sp. TM1040 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 1957.5155 2496.0627 3375.9522 1723.2993 1358.1663 3072.0963 2934.761 2695.912 3262.3778 3017.3645 1145.709206 2725.4318 256825489 sigma_70 Stress Sigma factors Kytococcus sedentarius DSM 20547 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Dermacoccaceae;genus:Kytococcus;species:Kytococcus sedentarius; 1936.8231 3863.09675 3720.3636 1819.5381 3716.23325 2218.2194 2153.3288 2448.3554 2588.17815 2757.4263 1528.6375 2210.8257 146410775 CadA Metal Resistance Cadmium Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 3757.613567 3448.250133 3972.0954 4162.791967 4199.341233 3860.721433 3814.022733 6113.3529 3931.954833 3895.691367 4033.7069 3427.1502 281328431 sigma_24 Stress Sigma factors Burkholderia sp. CCGE1001 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1730.2411 2062.7521 1563.1546 1124.512 2467.0906 1842.6745 1401.9371 1378.374 2353.388 1938.317 1463.7722 254522217 iro virulence Iron oxidation Stenotrophomonas sp. SKA14 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas; 3220.1381 7160.0673 4472.1713 5147.297 4091.4488 7212.3109 5371.1635 3868.1745 6634.5585 7071.1542 1976.5041 6639.3296 209966627 TerC Metal Resistance Tellurium Rhodospirillum centenum SW superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum centenum; 4063.5251 3007.8419 1536.1257 3294.9944 3384.8269 3042.1688 2086.7212 2046.433 3123.5807 2403.4554 4915.6261 2460.9879 34333270 contractile_tail_sheath_protein Bacteria phage STRUCTURAL Vibrio phage KVP40 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses;species:Vibrio phage nt-1 sensu lato; 1737.9512 460.6572626 1285.6686 1389.2578 1170.4101 898.14 774.0339 1564.3804 770.2743 1231.2574 1774.6494 1087.2862 162448868 bphD Organic Remediation Aromatics Polycyclic aromatics Sorangium cellulosum 'So ce 56' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Polyangiaceae;genus:Sorangium;species:Sorangium cellulosum; 7197.2801 5077.2074 6141.6677 7663.683 7630.796 5346.843 4759.7774 4971.1037 4950.763 5362.2631 9653.9986 6715.2008 110680804 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Roseobacter denitrificans OCh 114 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter denitrificans; 952.82 1032.0833 1362.975 727.5840342 2550.797 894.1318 1510.7322 893.7432 1037.198 972.7429 1272.4394 73542944 fccAB Sulphur sulfide oxidation Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 1645.6445 1173.9292 1802.2419 1446.4312 2067.253 1670.9913 2110.4989 1525.4167 1378.9428 1511.5688 1280.2231 2155.4157 13476103 proV Stress Osmotic stress Mesorhizobium loti MAFF303099 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium loti; 3831.8942 2602.3611 2763.2002 3736.0821 2787.2792 2869.289 5155.1676 2554.2436 2680.1989 2216.2164 3734.7447 2579.1548 148260501 AceA Carbon cycling Carbon degradation Others Acidiphilium cryptum JF-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Acidiphilium;species:Acidiphilium cryptum; 2227.1152 2626.5082 3100.2254 2701.1245 5174.1331 2654.2775 2964.8933 1945.7013 2621.4999 2337.7744 3534.0192 2673.4823 61808006 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 674.8386 1088.6347 1501.0565 846.8358 1545.4107 890.2132 1063.5883 1256.5082 842.5326 1079.8962 1096.915241 1451.8526 5616323 mnp Carbon cycling Carbon degradation Lignin Ceriporiopsis subvermispora superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Gelatoporia; 4748.7469 2252.9985 3873.6679 5066.3035 3176.8408 3634.7967 3422.0162 2458.4141 2650.2029 3128.3925 3671.0795 3644.0297 227241525 ahpC Stress Oxygen stress Sphingobacterium spiritivorum ATCC 33300 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Sphingobacteriaceae;genus:Sphingobacterium;species:Sphingobacterium spiritivorum; 529.6086 923.2236 659.9182 710.2040042 1024.1019 956.2729 665.9044 739.3114 794.6715 190014313 cnrC Metal Resistance "Cobalt,Nickel" Stenotrophomonas maltophilia K279a superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 9392.8428 7731.6983 13358.9957 5453.0805 7118.9075 8104.7376 7566.3357 12807.1192 9710.8446 8086.4636 6269.5086 10998.3066 50952847 lip Carbon cycling Carbon degradation Lignin Trametes versicolor superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Trametes; 2296.4393 1184.6499 1677.7258 1812.1004 1415.3483 1653.1933 1399.9528 2479.7176 1909.4936 1886.1585 1690.9957 2226.0686 238798713 ppx Phosphorus Phosphorus utilization Yersinia mollaretii ATCC 43969 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia mollaretii; 4067.7966 4916.0269 3778.318 3273.7769 6109.1416 4642.2672 3387.617 3829.2834 4123.0711 4021.4181 4860.2974 3384.7218 155964467 nasA Nitrogen Assimilatory N reduction uncultured marine bacterium superkingdom:Bacteria; 1159.9057 2014.9293 3641.6032 1188.0137 1789.4389 1124.7577 1862.3062 3898.3504 1499.3812 1973.3498 2107.0778 3206.833 196203633 AceB Carbon cycling Carbon degradation Others Cyanothece sp. PCC 7822 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 870.3188 1914.5052 926.2525 1342.6862 964.8697 2227.6194 1726.6707 981.0029 1793.0276 1873.5962 1427.0931 114551159 mer Metal Resistance Mercury Mariprofundus ferrooxydans PV-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Zetaproteobacteria;order:Mariprofundales;family:Mariprofundaceae;genus:Mariprofundus;species:Mariprofundus ferrooxydans; 1042.2657 2135.168 1151.251 1311.8804 1080.0868 1589.5244 2356.6271 1369.7679 1466.1817 1343.2011 1869.3304 1366.9042 319443032 CysJ Sulphur sulfite reductase Corynebacterium variabile DSM 44702 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium variabile; 1166.057732 2578.2012 1698.660909 1818.36695 2427.4462 2280.637731 3092.10955 1274.120922 2144.20225 1799.1547 1909.9199 1456.118427 4160334 limEH Carbon cycling Carbon degradation Others Rhodococcus erythropolis superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 1855.8196 1388.8238 2529.8705 1824.7706 1549.4328 2492.6328 1303.1316 1541.8187 1046.538773 118705647 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 2298.4407 552.9377 1009.0548 1386.2169 1233.7855 725.4398 860.6571 1427.8684 836.149 887.9447038 2531.2082 948.3972 282884408 iro virulence Iron oxidation Burkholderia sp. CCGE1001 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 2359.4636 1978.1415 3418.6111 807.3184 1742.7605 2183.7975 2283.2979 3151.2626 2579.1793 2425.498 1161.7818 2660.3816 166861877 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1224.2599 56478367 CopA Metal Resistance Copper Azoarcus sp. EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 2163.4998 2331.2887 2579.2902 1753.0229 1485.609738 2381.1607 1669.1819 3084.096 1963.5797 1625.8351 2801.6532 2704.0093 158422689 phzF soil_benifit Azorhizobium caulinodans ORS 571 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Azorhizobium;species:Azorhizobium caulinodans; 10680.0867 5909.3218 8897.0311 10696.1095 3861.7161 5613.1995 4724.3 5618.9849 6512.3961 7639.9396 6320.6089 7864.8868 67538540 per_fun soil_benifit Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 8288.8692 6775.4205 7698.1342 9119.2505 6064.435 9515.8335 9421.1518 9454.4415 8768.2709 8465.9442 6739.3337 6146.4207 34422115 FTHFS Carbon cycling Acetogenesis Treponema sp. ZAS-2 superkingdom:Bacteria;phylum:Spirochaetes;class:Spirochaetes;order:Spirochaetales;family:Spirochaetaceae;genus:Treponema; 1767.2336 2841.7427 1381.5855 2036.8493 1538.4336 3063.4067 2314.0381 1470.427 2202.4527 2700.0475 1214.1314 2600.7558 114537970 sox Sulphur Sulphur oxidation Fulvimarina pelagi HTCC2506 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Fulvimarina;species:Fulvimarina pelagi; 644.3375824 737.2282 915.7486 1021.2375 465.0490207 507.3811126 217329957 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 2314.0759 2939.3507 2901.9068 2361.8779 2180.7447 2495.9053 2552.7106 4727.2026 2371.2691 3163.0867 3008.8654 3383.9391 148474732 napA Nitrogen Dissimilatory N reduction uncultured bacterium superkingdom:Bacteria; 661.863 545.3941 680.2589 743.5153 1039.6272 649.4319 680.1271 821.057 528.4773 691.7727 1219.7772 949.7018 108765839 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rubrobacter xylanophilus DSM 9941 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Rubrobacterales;family:Rubrobacteraceae;genus:Rubrobacter;species:Rubrobacter xylanophilus; 4757.0347 2464.0916 2637.7971 4620.8737 3280.4926 3617.3727 3021.7856 3513.6766 2789.4659 3127.689 3489.8619 3631.8217 220710642 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 2562.3316 1264.8643 1781.6831 2481.3888 1520.3083 1716.0246 1320.0626 1141.905 1709.1552 1835.0832 1806.6742 1828.9154 46143191 dmsA Organic Remediation Others Actinobacillus pleuropneumoniae serovar 1 str. 4074 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Actinobacillus;species:Actinobacillus pleuropneumoniae; 443.5101482 491.3699 486.7271183 803.4103 517.1696928 465.7142 414.5960743 559.3945 774.817413 561.0057538 269920284 Ni_Fe_hydrogenase Energy process Energy process Dehalococcoides sp. GT superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides; 1468.8889 632.1454 1121.9539 1372.9577 706.6598 920.8736 793.3268 688.6121 838.7001 1174.8222 1054.5359 962.514 133738787 hly virulence hemolysin Herminiimonas arsenicoxydans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Herminiimonas; 2133.1563 2522.1212 2935.464 2919.6 3764.378 3820.9049 1850.1946 2932.1072 2814.5408 764.3667115 4463.5626 84498274 glnA Stress Nitrogen limitation Janibacter sp. HTCC2649 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Intrasporangiaceae;genus:Janibacter; 3403.0591 3089.3178 4461.6883 3233.9582 2501.7297 3922.122 3071.0961 3726.2761 3398.1928 3089.8683 3920.6952 4094.08 220911162 ara Carbon cycling Carbon degradation Hemicellulose Arthrobacter chlorophenolicus A6 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter chlorophenolicus; 1761.001 654.6105 1146.8746 1927.1459 1094.553 475.2624809 623.6592 963.258 875.0448 812.8729 1876.7299 1080.3239 115381152 gyrB other category gyrB Entomoplasma lucivorax superkingdom:Bacteria;phylum:Tenericutes;class:Mollicutes;order:Entomoplasmatales;family:Entomoplasmataceae;genus:Entomoplasma; 1005.6358 812.2869 963.1101 653.3606533 763.2175 933.631907 856.5579 754.9078 886.2141415 302681799 lactase_fungi Fungi function carbon degradation Schizophyllum commune H4-8 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Schizophyllaceae;genus:Schizophyllum;species:Schizophyllum commune; 1246.1277 1211.837 1550.5598 1574.8928 1165.5472 1419.33063 1099.8926 1064.587 9622538 bbs Organic Remediation Aromatics BTEX and related aromatics Thauera aromatica superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Thauera; 10297.2663 9374.3921 5257.3326 9097.3207 6235.6206 5305.5188 5904.6323 5332.8762 7071.9411 6063.0583 12604.5082 5140.7321 88866367 dsrB Sulphur sulfite reductase bacterium LS1101 superkingdom:Bacteria; 679.0698 784.3552 850.4382 859.9417 798.6031 492.6318 609.6704 662.2149764 706.4583019 17429896 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia solanacearum superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 3717.7106 3481.5209 1685.3299 2640.4719 2031.5711 1313.8949 1574.0249 1989.8214 1631.1656 1164.348 4610.4415 1325.5973 301116385 necrosis_Oomycetes soil_borne_pathogen oomycete virulence Phytophthora infestans T30-4 superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora;species:Phytophthora infestans; 1430.2039 1105.731616 1793.7654 1855.2613 2011.6826 1892.1648 1390.7307 835.2296798 1426.9365 1628.8277 3360.8498 1424.3055 227217811 pilin virulence pilin Anaerococcus tetradius ATCC 35098 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XI. Incertae Sedis;genus:Anaerococcus;species:Anaerococcus tetradius; 1234.1326 732.7097 1064.5423 1193.0955 2473.400473 785.9909 684.9109 1212.1628 838.9092 219863867 glnA Stress Nitrogen limitation Cyanothece sp. PCC 7425 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 792.9354 1824.5683 863.7936549 1082.173 1942.6699 1191.1337 1114.2179 1597.4856 1396.9055 1449.3717 1568.0008 58001588 pstA Stress Phosphate limitation Gluconobacter oxydans 621H superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconobacter;species:Gluconobacter oxydans; 5646.4945 4932.503 5867.3076 3291.433 2903.9373 5630.6834 4337.3289 5620.7642 4537.3422 4943.1862 2420.8392 5952.2315 261407519 CysJ Sulphur sulfite reductase Paenibacillus sp. Y412MC10 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 803.3185 1026.4383 705.8797871 771.5941156 2510.7923 583.699 1853.4511 598.3989 1021.4952 966.0431 847.025 169629616 katE Stress Oxygen stress Mycobacterium abscessus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 1079.8358 2420.219 2133.9312 1363.931 1537.669 2142.8621 2229.3076 1842.9239 2426.753 2097.986 2082.5931 112463637 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 3295.1977 1701.8065 2033.4052 2486.6898 2084.2028 1883.6996 1505.1118 1823.9323 2198.5969 1558.077 3232.7506 2201.4191 156936368 CopA Metal Resistance Copper Enterobacter sakazakii ATCC BAA-894 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Cronobacter;species:Cronobacter sakazakii; 1576.759167 1473.9781 1073.973633 1542.948567 2563.51885 1321.014133 2051.6796 1016.649967 1293.1523 1252.6523 2201.3023 1595.4975 38200993 pcc Carbon cycling Carbon fixation Corynebacterium diphtheriae superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium; 1608.5713 1768.0168 1308.5392 1979.1554 4082.8222 1623.0264 2974.425 1053.3017 1589.6954 1543.4043 1613.2521 1479.8391 14389261 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 10485.5333 8447.1418 10479.8577 10486.3867 13692.9368 7860.2921 7589.1041 7413.8306 8234.4118 8460.6737 8584.9758 7349.498 145631127 ArsC Metal Resistance Arsenic Haemophilus influenzae 22.4-21 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Haemophilus;species:Haemophilus influenzae; 1009.51105 1486.1005 1345.84745 1268.3018 1451.6423 1547.46565 1827.45465 1144.49635 1165.0292 1740.09005 1001.3697 260605826 proX Stress Osmotic stress Vibrio coralliilyticus ATCC BAA-450 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio coralliilyticus; 678.7877 1169.344 676.2096163 997.3002 1038.9388 1058.621316 822.5663 790.4841 1062.6563 434.8745554 198255929 pstA Stress Phosphate limitation Octadecabacter antarcticus 307 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Octadecabacter;species:Octadecabacter antarcticus; 1680.8237 1289.9798 1342.7506 1564.1889 1484.38 1065.9795 1126.6058 1207.3286 855.5678 1104.3284 1705.7788 1577.1465 238508686 chitin_synthase Fungi function major biomolecule Aspergillus flavus NRRL3357 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus flavus; 2874.5116 1806.8561 2885.8843 3020.3042 1144.9664 2291.9614 1777.1512 1951.5719 2012.9595 2532.8523 2223.2128 2608.0888 240250666 clpC Stress Protein stress Bifidobacterium animalis subsp. lactis DSM 10140 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium animalis; 1717.3192 1597.4322 1669.54 1834.5917 1655.5863 1339.562 1703.5069 1769.1473 1447.585 1336.41649 1354.3254 4883502 exoglucanase_fungi Fungi function carbon degradation Humicola grisea var. thermoidea superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;genus:Humicola;species:Humicola grisea; 4028.2251 10021.4845 6806.791 6079.7012 6402.6162 9723.9502 7207.6272 8075.7285 9369.3094 10543.2723 2178.9354 9934.1183 225794263 sigma_24 Stress Sigma factors Acidobacterium capsulatum ATCC 51196 superkingdom:Bacteria;phylum:Acidobacteria;class:Acidobacteria;order:Acidobacteriales;family:Acidobacteriaceae;genus:Acidobacterium;species:Acidobacterium capsulatum; 1230.0223 994.3271 1343.1868 1418.0505 1113.7247 1385.1766 1335.6437 1286.5313 1212.946815 15643086 CopA Metal Resistance Copper Thermotoga maritima MSB8 superkingdom:Bacteria;phylum:Thermotogae;class:Thermotogae;order:Thermotogales;family:Thermotogaceae;genus:Thermotoga;species:Thermotoga maritima; 646.2547 1064.3984 922.0069 825.3444 1053.4961 925.5699 813.3424 629.2769 889.7108 1061.706 1546.728 902.79205 118194172 ureC Nitrogen Ammonification Cenarchaeum symbiosum A superkingdom:Archaea;phylum:Thaumarchaeota;order:Cenarchaeales;family:Cenarchaeaceae;genus:Cenarchaeum;species:Cenarchaeum symbiosum; 643.6354 924.9948 504.5654134 600.6766567 1691.5129 995.0867 1887.5407 697.0487 1142.551 678.8866 1425.2596 677.2794 111609818 AssA Carbon cycling Carbon degradation Others sulfate-reducing bacterium AK-01 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria; 1328.3064 1175.3223 1288.8382 787.5118 1153.9911 1029.7255 1024.1078 1990.0029 959.354 1292.5054 1089.2034 1708.0432 217337278 cellobiase Carbon cycling Carbon degradation Cellulose Dictyoglomus turgidum DSM 6724 superkingdom:Bacteria;phylum:Dictyoglomi;class:Dictyoglomia;order:Dictyoglomales;family:Dictyoglomaceae;genus:Dictyoglomus;species:Dictyoglomus turgidum; 748.5013 1620.5217 1104.2123 985.4219 1624.5071 1248.6146 835.5942 1108.2565 1451.3704 1433.6297 55980904 SMR_antibiotics Antibiotic resistance transporter Thermus thermophilus HB8 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Thermus;species:Thermus thermophilus; 1531.1879 869.2577 893.5032 1010.200212 545.0221 730.5961 1233.8006 588.3878 797.452 1460.768 800.8294 150959825 nagI Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas aeruginosa PA7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 13681.0634 5884.7541 8722.0241 13047.728 8656.1466 7771.7359 6843.4742 8053.5374 8622.0185 9117.0822 13977.7706 8143.4887 77969336 mauAB Organic Remediation Herbicides related compound Burkholderia sp. 383 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1217.3557 801.2285758 1134.8758 964.9216244 594.1219823 1145.754659 145963751 pilin virulence pilin Vibrionales bacterium SWAT-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales; 597.0387 750.5658 36738.27599 229918012 SMR_antibiotics Antibiotic resistance transporter Exiguobacterium sp. AT1b superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;genus:Exiguobacterium; 796.777 1585.5689 1188.3558 1297.2378 1489.0061 1287.6167 1077.6738 1286.5631 1272.5298 1169.4734 819.1668268 1263.9254 157850427 cumA Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 589.1708195 954.0096 817.8461 847.1121 664.119 889.2753 901.4294 695.9774 614.0429238 551.1322283 167351483 nmoA Organic Remediation Aromatics Nitoaromatics Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 1461.3131 1514.6311 1624.1623 1858.8226 1217.503413 1499.4875 2245.4118 1411.8181 1332.219 1403.2207 1794.0613 1616.1052 209401718 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2677.977 1729.42595 2384.13395 2841.9556 2039.767556 1870.85965 1977.7425 2943.51095 1737.82325 1931.2821 3053.46675 2169.83465 219862272 ahpC Stress Oxygen stress Cyanothece sp. PCC 7425 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 1443.5421 647.6531 1202.2119 1214.5595 798.3733 736.8365 1029.7626 1123.9059 964.6368 1099.8953 902.2153 254447630 glnA Stress Nitrogen limitation gamma proteobacterium HTCC5015 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 1616.6441 1885.5541 1611.2803 1262.3639 1696.0281 1412.8682 1279.041336 1375.0404 1365.6456 1129.330825 114543654 sigma_24 Stress Sigma factors Roseovarius sp. HTCC2601 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 1615.2875 1463.1384 1532.7235 1721.6693 1762.5387 3663.5334 1762.7936 2137.6963 1278.458 1188.5692 1036.8335 149232468 PobA Organic Remediation Aromatics Aromatic carboxylic acid Pedobacter sp. BAL39 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Sphingobacteriaceae;genus:Pedobacter; 2306.9568 1175.6536 1387.3141 1442.0275 1533.8075 1539.8246 1432.952502 1512.5257 1021.6933 1090.91745 1808.8845 1849.9121 118473932 katA Stress Oxygen stress Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 4151.78875 5092.8489 4411.2072 4610.717 4837.156833 4713.74335 5023.29445 4521.56715 4441.29095 4163.7569 4011.2799 3190.876 110225000 gyrB other category gyrB Streptococcus peroris superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus; 548.4975889 904.2284 1079.1957 917.1196 803.3309628 889.6642 964.9152 937.7042091 1049.7694 227493136 ahpC Stress Oxygen stress Mobiluncus curtisii ATCC 43063 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Mobiluncus;species:Mobiluncus curtisii; 5997.8565 2412.9558 4292.1434 5476.9553 3651.5876 3784.554 3418.8313 4701.0089 4496.2565 4682.9298 4212.7142 4154.3375 148500051 fnr Stress Oxygen stress Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 3857.42 2457.9497 2772.8544 4152.4458 3284.5879 3009.0256 3653.7493 3251.6555 2870.5542 2771.7249 3858.6156 3554.8381 228306961 ppk Phosphorus Phosphorus utilization Porphyromonas uenonis 60-3 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Porphyromonadaceae;genus:Porphyromonas;species:Porphyromonas uenonis; 551.9497092 1250.5926 1858.1899 941.5953 1152.5312 676.7670725 1480.8523 1921.3233 1187.6673 2073.7548 2100.1979 196156442 arcB Stress Oxygen limitation Alteromonas macleodii 'Deep ecotype' superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Alteromonas;species:Alteromonas macleodii; 1319.6292 808.1074 932.8243 1018.274 1090.4008 800.311 567.2142 841.1259 674.9161 748.2526 941.0677 666.5407 145213862 pcc Carbon cycling Carbon fixation Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 585.1109 389.5408846 493.9370147 559.4617 598.3219168 752.4011 550.9481 820.8569 340.3551173 145247967 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 1517.272 1656.1754 1739.2133 1638.0048 1757.7385 1572.2499 1476.0233 1164.9394 1405.7004 1360.6319 2292.4036 1578.3779 124488337 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 11683.4928 3904.6885 3600.5146 5114.149 4693.2245 3359.3318 3370.0905 4009.9639 3472.9323 3566.5752 6779.2386 4267.1763 118706836 exaA Organic Remediation Chlorinated solvents Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 5249.3686 1902.387 3574.6004 4387.235 2649.9553 2518.6389 2420.3786 3480.6683 2877.3921 2784.3765 5959.4711 2830.9511 218645703 phytase Phosphorus Phosphorus utilization Buttiauxella agrestis superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Buttiauxella; 5965.7937 4698.3203 6522.137 5747.9061 3358.9282 6707.0576 7077.314 5908.6159 5985.4914 6634.2222 4294.9985 5034.842 214043547 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 2157.4419 1493.3638 1993.1454 2188.344 1155.7733 1381.5422 1430.3718 987.8781 1330.2969 1597.9971 2093.6241 1013.722 198036974 nitA Organic Remediation Aromatics Other aromatics Burkholderia cenocepacia J2315 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia cenocepacia; 17546.65735 2650.0437 2069.0851 1392.7917 1240.5983 2720.459 2138.1078 2435.5128 2670.4837 2121.9716 2713.3473 85118214 pheA Organic Remediation Aromatics Other aromatics Neurospora crassa OR74A superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Sordariaceae;genus:Neurospora;species:Neurospora crassa; 1114.48445 2035.7379 7861.859897 1314.9487 2505.6164 1395.9003 1231.351273 991.6062 1351.0902 947.3225 1556.2177 1149.7271 151425707 pstA Stress Phosphate limitation Sulfurovum sp. NBC37-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;genus:Sulfurovum; 652.0611979 752.2133 654.7842402 348.0469884 164428488 lactase_fungi Fungi function carbon degradation Neurospora crassa OR74A superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Sordariaceae;genus:Neurospora;species:Neurospora crassa; 779.0240037 527.9763498 679.9304167 761.1704 811.5989 733.2042 495.1031 556.5152909 113730103 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 7571.1815 16253.6262 22761.36744 9291.0311 17397.194 13582.0593 10563.6782 9348.5009 12907.8019 11200.0159 7841.3423 11248.098 225210369 clpC Stress Protein stress Roseburia inulinivorans DSM 16841 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Roseburia;species:Roseburia inulinivorans; 1125.8011 1415.4558 1561.1046 805.6062 935.1774609 1466.9277 1696.9055 1608.2221 1596.6498 1936.2959 1983.8437 31616866 ZntA Metal Resistance Zinc Mycobacterium bovis AF2122/97 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium bovis; 6883.6225 11440.2024 12507.9269 6771.2892 5689.1499 11676.359 9228.4519 12019.591 12744.9615 10274.0418 3175.7323 12887.864 72394899 nifH Nitrogen Nitrogen fixation Methanosarcina barkeri str. fusaro superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanosarcinales;family:Methanosarcinaceae;genus:Methanosarcina;species:Methanosarcina barkeri; 790.6698725 681.6248 528.8464335 1090.8298 955.7218 746.9756 514.6601433 641.8252 193212077 sigma_32 Stress Sigma factors Chlorobaculum parvum NCIB 8327 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobaculum;species:Chlorobaculum parvum; 1594.8704 1499.5184 1549.6038 1803.4572 1549.332626 1595.118 1406.9496 2364.606 1614.0184 1719.7784 1481.2535 148507540 iro virulence Iron oxidation Mycobacterium tuberculosis H37Ra superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium tuberculosis; 2681.5029 2885.7683 4105.311 3126.871 3785.8552 3017.0599 2339.8164 3083.6831 2804.934 4687.8488 3745.8414 4586276 phdCI Organic Remediation Aromatics Polycyclic aromatics Alcaligenes faecalis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Alcaligenes; 567.1685897 561.7493966 715.2574 698.4870317 1311.8614 680.6823 531.7015432 654.3340381 531.5636973 118047447 pulA Carbon cycling Carbon degradation Starch Chloroflexus aggregans DSM 9485 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aggregans; 1569.8326 1254.036214 1440.7467 1038.31192 2508.6499 1348.1299 1082.4072 1193.5902 1708.8058 1485.1825 163736273 xylA Carbon cycling Carbon degradation Hemicellulose Phaeobacter gallaeciensis BS107 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 769.5363 795.5814 582.2792172 934.3767 628.1192 501.6848 490.332 581.5947347 911.9304 90425882 fnr Stress Oxygen stress Rhodopseudomonas palustris BisB18 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1141.8662 2039.9939 2009.4441 1472.6757 1500.0595 1473.1345 1357.1 2212.9878 1775.0183 1570.3155 2576.3024 1365.3937 30249004 pstB Stress Phosphate limitation Nitrosomonas europaea ATCC 19718 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas;species:Nitrosomonas europaea; 1229.7402 1437.20095 2163.8535 1333.8102 1430.703018 1654.8235 1214.80035 2313.4412 1970.8253 1213.2906 1348.596963 1806.3806 154247909 CadA Metal Resistance Cadmium Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 553.2629 449.1761918 702.3669287 846.7802 851.0106 726.7888 148254221 sox Sulphur Sulphur oxidation Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2665.1827 1673.4161 2086.2126 1956.7873 2072.3881 3707.5332 2603.3385 1819.1911 2679.8362 894.1237 1142.8472 221565531 cytochrome Energy process Energy process Geobacter sp. FRC-32 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 520.611979 766.1098156 485.686108 497.65188 958.0087 566.9188404 689.9781 454.8765 209543588 oxyR Stress Oxygen stress Gluconacetobacter diazotrophicus PAl 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter;species:Gluconacetobacter diazotrophicus; 2735.3262 1853.9271 2828.6424 2225.6697 2638.2573 2096.9463 2146.3778 3653.7715 1996.8723 2510.9548 4116.5918 2697.0607 194737034 papC soil_borne_pathogen adherence Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 3121.9345 2055.8202 2231.6366 2448.186 3012.9546 2264.7708 1842.0497 2844.3588 2115.0741 2150.7364 4137.1088 3098.6907 90202496 nhh Organic Remediation Aromatics Nitoaromatics Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 17825.6659 15605.3232 10634.0925 19605.7239 15636.7443 16952.9972 17081.6465 13167.1245 11172.7395 13441.9263 15807.132 11622.2771 50236435 B_lactamase Antibiotic resistance Beta-lactamases Ralstonia pickettii superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 4959.566833 6149.7738 3940.156967 4305.935667 6934.424867 5492.608667 4665.683333 5447.544 5697.0094 5360.476433 8961.7777 4852.064433 158521808 cap virulence capsule Desulfococcus oleovorans Hxd3 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfococcus;species:Desulfococcus oleovorans; 1828.8744 2185.6031 2618.3869 2097.1185 2887.9417 2331.4908 1647.2853 1597.191793 1783.0211 1928.2783 4025.2743 2811.973 302407379 cellobiase_fungi Fungi function carbon degradation Verticillium albo-atrum VaMs.102 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Plectosphaerellaceae;genus:Verticilium;species:Verticillium albo-atrum; 2152.4585 3132.0054 2872.9587 2019.8781 2420.6397 3100.8124 2297.6472 2624.5452 3031.6357 2554.638 2869.2103 3324.7252 325547137 xopD soil_borne_pathogen secretion system type III Xanthomonas gardneri ATCC 19865 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas gardneri; 2055.1281 1307.4754 2239.9386 1981.6209 2224.3138 1619.2276 1558.391 2237.039 1595.3102 1473.2232 2737.6997 2003.5908 116612458 grpE Stress Heat shock Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 7392.9484 7276.7891 3875.18 5976.5452 5073.6665 3127.6888 3602.0529 3888.667 4071.3149 3601.0572 12607.9197 2718.0712 269303901 ara Carbon cycling Carbon degradation Hemicellulose Xylanimonas cellulosilytica DSM 15894 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Promicromonosporaceae;genus:Xylanimonas;species:Xylanimonas cellulosilytica; 6485.2206 8964.2729 8562.3903 6165.0505 5286.4684 8610.32 7716.3318 8490.6509 10653.0222 8989.4832 3856.7657 9661.4625 82801443 alkB Organic Remediation Other Hydrocarbons bacterium alkW92 superkingdom:Bacteria; 2589.2499 1264.5967 1403.4675 2832.6071 1638.1987 1560.0156 2071.936 2172.9348 1786.3294 2219.9237 1490.7747 1509.8168 148499215 pstC Stress Phosphate limitation Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 2959.57165 4428.36925 3633.53375 3092.9422 4644.944 3610.8592 2629.74465 3020.48205 3592.62515 3777.09625 3108.93985 3263.76265 121594700 silC Metal Resistance Silver Acidovorax sp. JS42 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax; 5079.0337 8440.1334 6312.2595 6010.652 10628.8484 7677.4813 6106.7607 7126.2573 8486.9141 8323.9963 3596.9636 6360.6728 62288567 primase Bacteria phage REPLICATION Enterobacteria phage RB43 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 2089.7431 1925.4256 2106.3498 2296.6777 2935.1826 1921.5988 1914.8742 1597.1951 1778.548 1807.3122 3266.265 2378.0171 253985052 fnr Stress Oxygen stress Methylovorus sp. SIP3-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Methylophilales;family:Methylophilaceae;genus:Methylovorus;species:Methylovorus glucosotrophus; 856.0586726 779.1072544 1117.4031 684.1703808 653.0820582 953.7665 108766387 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rubrobacter xylanophilus DSM 9941 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Rubrobacterales;family:Rubrobacteraceae;genus:Rubrobacter;species:Rubrobacter xylanophilus; 916.9961 785.0051 720.9259 777.9509 1533.3335 1098.0607 743.5231 664.0682685 1059.5174 775.0968 899.4826 114800413 NirB Nitrogen Assimilatory N reduction Hyphomonas neptunium ATCC 15444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Hyphomonas;species:Hyphomonas neptunium; 1784.9105 2844.75 3036.4552 1482.264 1757.3404 2787.194 2630.0658 2605.4326 2970.4671 2987.4384 1365.4624 3346.285 192285798 CopA Metal Resistance Copper Rhodopseudomonas palustris TIE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 5211.9194 3165.1488 4936.1117 5183.9379 4686.6834 4194.2367 3840.3125 4847.8701 18872.68915 7407.0745 5140.0639 4100.699 15075962 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Sinorhizobium meliloti superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium; 2687.1445 1066.3862 1220.0082 2438.2279 2027.0019 1197.7294 1362.3075 1098.7895 1287.2424 18358.97894 2599.0777 1348.5029 15077498 dsrA Sulphur sulfite reductase Desulfoarculus baarsii superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfarculales;family:Desulfarculaceae;genus:Desulfarculus; 1055.792 997.2579 794.7823449 690.0646 393.6513484 1159.7157 485.4643578 121553537 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 1953.1098 809.8149 1417.1637 1816.5658 734.794479 924.4631 1141.5859 1208.309 1107.6624 1483.4628 787.045935 1294.3013 17129661 xylF Organic Remediation Aromatics BTEX and related aromatics Nostoc sp. PCC 7120 superkingdom:Bacteria;phylum:Cyanobacteria;order:Nostocales;family:Nostocaceae;genus:Nostoc; 635.491 884.7284 947.4649 564.1620053 389.357895 846.8893 572.6154052 770.0689 163699781 xylL Organic Remediation Aromatics Aromatic carboxylic acid Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 1757.7773 1615.0934 2032.3293 2281.7337 1293.4574 2060.453 1423.9944 1727.8002 1883.1088 1647.8776 1791.4426 2079.8878 227963998 ahpF Stress Oxygen stress Tsukamurella paurometabola DSM 20162 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Tsukamurellaceae;genus:Tsukamurella;species:Tsukamurella paurometabola; 1773.4931 2235.3628 2529.9868 2105.0767 2206.5297 2731.7062 2362.9816 2266.9487 2843.0744 2855.987 2055.7613 3028.999 218244866 fnr Stress Oxygen stress Thermus aquaticus Y51MC23 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Thermus;species:Thermus aquaticus; 2276.0087 1848.1547 2175.6159 2612.1591 1847.7963 1849.33 1615.1572 1619.3096 1979.0727 2008.5986 2631.2707 1870.0438 29160303 exoglucanase_fungi Fungi function carbon degradation Acremonium thermophilum superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;genus:Acremonium; 4830.020014 5422.02811 12780.3096 7113.7274 5539.5782 11432.7809 4930.960519 6274.714035 7357.382492 5667.016549 3768.6434 10756.6447 119897646 CopA Metal Resistance Copper Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 2526.7226 2318.0365 1987.8675 2678.0579 1162.2195 1970.9845 1871.5741 1414.5416 1362.8557 1604.0716 1453.224101 1829.9728 38674622 Onr Organic Remediation Enterobacter cloacae superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter; 4756.1213 5839.6837 4579.211 3737.1505 5749.2517 4171.1143 3240.5228 3667.062 4102.4176 4236.8301 3539.4487 3495.2123 117980557 pcaG Organic Remediation Aromatics Other aromatics Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 20987.4272 16975.7595 22259.24 24800.6564 6353.985 21224.5728 11717.6519 18677.0862 17453.8693 16448.504 15313.9549 16911.3735 91795559 vanA Carbon cycling Carbon degradation Others Chromohalobacter salexigens DSM 3043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Halomonadaceae;genus:Chromohalobacter;species:Chromohalobacter salexigens; 6445.1923 5562.1084 7477.0904 7901.4309 4780.0212 6850.5482 20128.7728 5621.8778 6983.4674 5972.6435 7529.7672 6284.2523 114544170 glnA Stress Nitrogen limitation Roseovarius sp. HTCC2601 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pelagibaca;species:Pelagibaca bermudensis; 1385.5683 2078.8205 1629.9926 1702.89 1679.6442 2290.5256 1902.0161 1492.9652 2037.5271 2181.6451 1612.0028 1707.4665 299741236 tre_fun soil_benifit Coprinopsis cinerea okayama7#130 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis;species:Coprinopsis cinerea; 435.6766 629.90275 430.0066882 394.9880832 741.735 431.7100894 498.42155 656.8626 437.5457 647.46425 608.6863 228015257 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 13144.6043 5935.5969 9544.2708 13316.7885 7122.0737 8268.1799 6329.719 5423.4525 7325.2356 8518.2479 15687.5135 9009.6291 209503100 ophC Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1557.9047 1669.7972 1969.4315 1190.6437 2142.674 1548.948 1257.9513 1200.526 2572.3764 1537.8769 3255.2857 1231.3797 197285132 xylA Carbon cycling Carbon degradation Hemicellulose Proteus mirabilis HI4320 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Proteus;species:Proteus mirabilis; 767.2663 750.3504 965.0438 770.9816 171058731 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Leptothrix cholodnii SP-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Leptothrix;species:Leptothrix cholodnii; 1493.5371 1481.7171 1965.2005 1346.9598 895.5157 1592.6054 1396.592 1585.5145 1953.8994 1569.2882 1766.392 123977972 sped_ara soil_benifit Hyperthermus butylicus DSM 5456 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Desulfurococcales;family:Pyrodictiaceae;genus:Hyperthermus;species:Hyperthermus butylicus; 1201.9488 1431.3075 1636.8698 958.7309 2384.4839 1504.2137 1066.8803 905.3875 1268.5342 1017.9559 1349.8944 1162.6905 256726695 phospholipase_C_fungi Fungi function carbon degradation Nectria haematococca mpVI 77-13-4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Nectria;species:Nectria haematococca; 1493.4028 3779.9771 2313.1449 1140.9079 4087.1071 1748.9733 1885.9922 2513.2343 2019.7858 2512.4288 1795.8391 1647.4012 254388305 endochitinase Carbon cycling Carbon degradation Chitin Streptomyces clavuligerus ATCC 27064 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces clavuligerus; 2680.4149 1496.9189 2329.0657 2353.5361 805.0977 2602.2296 3224.0745 3081.8809 1996.0802 2743.552 979.6271382 1823.9717 222448100 CadA Metal Resistance Cadmium Chloroflexus sp. Y-400-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus; 2150.32275 1199.7243 1372.36025 2122.19175 1249.623 1771.0339 1291.2838 1335.1618 855.02025 1370.6761 2465.95735 1657.055 227113476 ABC_antibiotic_transporter Antibiotic resistance transporter Pectobacterium carotovorum subsp. brasiliensis PBR1692 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium carotovorum; 2895.1168 2610.7457 3301.0884 3076.2312 4556.6021 3229.0476 2226.7382 2522.1915 2359.7833 2288.3628 5317.1493 3082.8161 114776934 CopA Metal Resistance Copper Mariprofundus ferrooxydans PV-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Zetaproteobacteria;order:Mariprofundales;family:Mariprofundaceae;genus:Mariprofundus;species:Mariprofundus ferrooxydans; 2463.1072 1525.87 1904.7162 2336.5101 2543.4217 2231.4931 1419.8421 2140.7374 1773.5506 2175.1797 3552.5181 2020.4404 209960557 fnr Stress Oxygen stress Rhodospirillum centenum SW superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum centenum; 3361.5399 1833.2332 3775.0175 4052.2484 1455.9217 3958.391 5706.3006 4129.8325 2440.755 4964.6816 26990323 iro virulence Iron oxidation Pseudomonas putida KT2440 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1450.9165 3704.6303 2256.8044 3874.6189 3383.4618 1719.466962 1883.27945 1998.7785 2665.7775 2889.8548 1875.2404 2545.8264 238763593 pstB Stress Phosphate limitation Yersinia kristensenii ATCC 33638 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia kristensenii; 780.5777 962.1903 1230.9855 1002.5492 1547.557 1568.9321 711.816 1044.5019 1172.8904 973.9574 765.8393 159181496 ppx Phosphorus Phosphorus utilization alpha proteobacterium BAL199 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 5303.5747 4277.488946 7477.2649 5124.7714 5001.772713 4528.543866 3321.712051 3774.816922 4660.114159 4172.264779 11379.9982 5594.828415 37527678 Arylest Organic Remediation Aromatics Other aromatics Photorhabdus luminescens subsp. laumondii TTO1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Photorhabdus;species:Photorhabdus luminescens; 752.3967 457.908052 449.9493192 430.5475901 388.8276947 466.8916 17429032 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia solanacearum superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 1598.7523 1547.4814 1866.9863 581.9667 726.3208 1767.2051 1310.0835 2063.8874 1597.0575 1596.4003 1946.7115 119535136 xylF Organic Remediation Aromatics BTEX and related aromatics Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 1479.1511 2005.7547 1713.9 1690.7814 3285.3842 2024.8271 1697.7084 1814.382 1838.4817 2260.5919 985.1287719 1804.9662 114800435 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Hyphomonas neptunium ATCC 15444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Hyphomonas;species:Hyphomonas neptunium; 3977.6659 9014.1983 5930.9324 3177.4422 7378.4066 4905.3932 7500.7374 3017.0262 6311.5102 5259.4424 6407.1936 3398.3031 213924247 nmoA Organic Remediation Aromatics Nitoaromatics Pseudomonas syringae pv. tomato T1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 4685.9912 4934.0958 5255.0644 6943.6589 3446.0283 7087.7549 5734.4944 7158.5031 5995.393 6260.2243 5245.6761 4936.4085 7839576 linC Organic Remediation Pesticides related compound Amycolatopsis mediterranei superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Amycolatopsis; 7535.5188 2454.076 4281.3551 6471.2039 3356.5393 3349.5355 4365.8554 3762.6494 3152.2371 3969.0698 6410.0285 2881.1978 261209936 pilin virulence pilin Vibrio sp. RC341 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 1218.71905 1756.82245 1727.4072 1289.928225 765.9463 1692.2292 1580.24755 991.9754 1650.398 1551.1762 1825.6056 1272.7553 68536433 alkK Organic Remediation Others Corynebacterium jeikeium K411 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium jeikeium; 1259.6943 2455.8599 903.1347 3051.8785 1330.4665 2247.1667 991.122 1359.4425 1003.6517 1392.49 1046.0205 257456646 nplT Carbon cycling Carbon degradation Starch Treponema vincentii ATCC 35580 superkingdom:Bacteria;phylum:Spirochaetes;class:Spirochaetes;order:Spirochaetales;family:Spirochaetaceae;genus:Treponema;species:Treponema vincentii; 593.7512593 586.603751 681.343 871.0477 925.9157 731.0563 88789085 CysJ Sulphur sulfite reductase Nitrococcus mobilis Nb-231 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Nitrococcus;species:Nitrococcus mobilis; 1136.7888 870.9537 973.8111 904.8037 1210.188 1617.0727 823.4779 1012.6304 632.8918865 902.292 505.2800703 113725650 ureC Nitrogen Ammonification Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 8868.179107 3511.5806 4732.2972 6453.7806 4742.1401 4258.459 5322.2544 5862.3776 3990.7392 5062.8794 6237.4357 5236.7213 184205283 gyrB other category gyrB bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3;genus:Pedosphaera;species:Pedosphaera parvula; 820.982 540.5265 888.0136 943.9238 397.8941701 507.3855 463.7873 451.9088 538.3345 791.9445 299750017 tre_fun soil_benifit Coprinopsis cinerea okayama7#130 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis;species:Coprinopsis cinerea; 2294.7199 1040.4296 955.2006 1544.0398 937.3215 699.371 908.7058 758.9258 747.4656 998.2024 2005.694 1123.2649 22138841 exoglucanase Carbon cycling Carbon degradation Cellulose Aspergillus oryzae superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus; 911.6769 1104.4992 627.0153 1104.541 770.1174 732.4244 872.999 605.952 665.4571 1135.3488 1058.0916 960.6739 68343997 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 2656.0219 4491.4959 3521.2599 2131.982303 1797.370317 4646.6046 2297.819504 3437.5166 4910.2131 4662.7743 2171.5359 2603.411104 120606508 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Acidovorax sp. JS42 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax; 2940.4508 2100.228 2666.2072 2660.8538 2707.0804 2768.8426 1840.8339 2680.0433 4052.4786 2418.4855 2567.7736 2057.9435 154282307 hmgB_fungi Fungi function carbon degradation Ajellomyces capsulatus NAm1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces capsulatus; 2401.9231 2926.7993 4090.6988 1169.1796 1507.1314 2869.5732 2372.5707 3770.0088 3409.7835 2605.7915 3333.253 3978486 xcpY soil_borne_pathogen Pseudomonas alcaligenes superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 2649.9639 3239.7055 3221.7755 2520.5637 3654.3746 2872.4897 2905.1448 3614.2874 2850.0987 3950.7122 1247.837786 3656.897 189424127 nrfA Nitrogen Dissimilatory N reduction Geobacter lovleyi SZ superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter lovleyi; 1333.04805 1038.25705 1400.7413 1286.7729 1377.4482 1208.89435 1153.4633 963.1975 1427.02385 1333.25175 1601.99655 1469.85565 172036138 NiR Nitrogen Assimilatory N reduction Cyanothece sp. ATCC 51142 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 3257.297138 2325.65015 2820.2022 2629.023642 4311.114 2357.908827 6260.737 2469.1506 2624.08993 2409.010206 2383.1205 3410.492852 184206882 silC Metal Resistance Silver bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3;genus:Pedosphaera;species:Pedosphaera parvula; 4038.785982 5427.8953 5655.0602 4463.872832 6446.773 4712.9955 2407.687367 1919.306421 3239.093715 3255.164482 4572.938689 4652.2725 112214149 alkB Organic Remediation Other Hydrocarbons Rhodococcus sp. DEOB100 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 933.4506 1550.8582 1534.3083 1710.4373 1096.5627 1836.8116 1471.1599 1236.3546 2191.6309 2206.8366 1997.9881 15073052 CadA Metal Resistance Cadmium Sinorhizobium meliloti superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium; 1944.1325 2921.770233 2442.720833 2237.4907 2281.716933 2432.8745 2525.059767 2660.845933 2505.814333 3080.146 3165.77 2689.0227 88643249 dsrB Sulphur sulfite reductase Desulfosalina propionicus superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfosalina; 858.6865 451.4571148 867.9637 970.5655 1026.4799 1470.357 712.1549 1035.474 2033.186681 933.7883 640.4059269 120562271 ahpC Stress Oxygen stress Desulfovibrio vulgaris subsp. vulgaris DP4 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 1259.1704 1418.4503 1311.3453 1397.7365 1403.5365 1651.0396 2535.62 1261.5557 1831.0148 1288.2286 1291.851 1539.5885 218659620 Catechol Organic Remediation Aromatics Other aromatics Rhizobium etli IE4771 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 9237.5789 5825.3738 8566.7085 9763.6916 7134.3026 7868.6526 6419.9896 7514.3324 6911.4304 8361.7836 7658.6111 8043.5309 270500053 SMR_antibiotics Antibiotic resistance transporter Micromonospora aurantiaca ATCC 27029 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Micromonospora;species:Micromonospora aurantiaca; 2274.0701 3990.8154 3050.2241 3322.2936 6915.2821 2522.5574 4857.8364 2369.3629 3261.5507 2649.5752 3247.4297 2303.8075 187483177 amyA Carbon cycling Carbon degradation Starch Exiguobacterium sp. AT1b superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;genus:Exiguobacterium; 1602.1104 3296.067638 1586.4178 1359.9245 3255.1911 1385.9618 2027.872726 1206.9029 1358.21355 1574.6871 2427.32585 1127.9545 167839647 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Burkholderia thailandensis MSMB43 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia thailandensis; 972.5789 1462.8963 1074.5988 889.9556 1926.8955 1341.2649 931.7495 1345.4262 1680.5571 1201.2196 1459.3641 256812180 narJ Stress Oxygen limitation Streptomyces griseoflavus Tu4000 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces griseoflavus; 2971.859175 2830.848529 2275.029806 3637.591431 2710.1139 3042.89432 4574.923723 3722.574593 2698.846759 2811.454541 4394.5324 4300.613834 169155568 pstB Stress Phosphate limitation Clavibacter michiganensis subsp. sepedonicus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Clavibacter;species:Clavibacter michiganensis; 5793.1349 3945.5921 5908.3817 2507.5785 1555.1749 3984.744 3207.4542 4529.9272 4377.0645 4316.7707 1387.0845 4533.8035 240862236 sigma_24 Stress Sigma factors Rhizobium leguminosarum bv. trifolii WSM1325 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 760.3621 401.7610255 408.0519934 936.4313 594.7975125 646.1867 499.5917 294.4492982 422.5943 636.412 157699971 glnA Stress Nitrogen limitation Arcobacter butzleri RM4018 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Campylobacteraceae;genus:Arcobacter;species:Arcobacter butzleri; 41711.0978 256584581 sigma_24 Stress Sigma factors Saccharomonospora viridis DSM 43017 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharomonospora;species:Saccharomonospora viridis; 2424.55655 5837.098768 5101.122452 3055.803633 6027.5208 3511.351739 4510.632929 5608.739333 4458.984216 5091.922192 3906.5687 4721.385315 144905750 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 738.4716644 940.4896915 770.883 619.6689 553.4975829 540.2103759 783.0708175 145255113 vdh Carbon cycling Carbon degradation Others Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 1082.5357 594.6441 872.0202 996.7278 1307.696 736.2831 754.936 873.0691 673.5997 813.7662 1549.5148 944.25 62391903 pcpE Organic Remediation Herbicides related compound Corynebacterium glutamicum ATCC 13032 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium glutamicum; 1049.2102 498.9348 621.5068772 956.4845 515.6441626 610.4455 482.44 600.8055 564.4417 668.9851 167573182 type_III_secretion virulence secretion Burkholderia oklahomensis C6786 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia oklahomensis; 1115.3508 888.2026 867.9834534 618.3643388 1012.1702 118140608 p450aro Fungi function organic remediation Pleurotus sapidus superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Pleurotaceae;genus:Pleurotus; 2329.7111 2002.4543 2282.1758 2108.6381 2978.9033 2321.9039 1449.0453 1836.4602 1594.9957 1891.9427 3861.5706 2877.8608 221157310 ChrA Metal Resistance Chromium Thermomicrobium roseum DSM 5159 superkingdom:Bacteria;phylum:Chloroflexi;class:Thermomicrobia;order:Thermomicrobiales;family:Thermomicrobiaceae;genus:Thermomicrobium;species:Thermomicrobium roseum; 5475.4611 9952.1013 7198.4702 6929.4409 5436.1349 10226.0178 9000.8367 7617.3761 10900.2476 10821.5291 3723.285 9610.4468 144905985 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 5755.4304 5289.1671 4630.5644 4680.321 6672.5431 5202.2007 4171.2745 4313.1881 4606.0477 3635.3047 7770.0132 4990.6238 254833164 phytase Phosphorus Phosphorus utilization Trichoderma pleuroticola superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Hypocreaceae;genus:Hypocrea; 2280.768233 2769.411767 2743.4846 2662.38105 3404.1467 2852.3386 2453.171967 2637.3596 2790.692967 2886.620267 3831.2916 3350.0339 111613224 catechol_B Organic Remediation Aromatics Other aromatics Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 1429.6934 1925.4256 2451.9098 944.2252 1044.1585 1972.7643 1494.7886 2087.0671 2043.8641 1720.4372 2048.5506 56697101 oxyR Stress Oxygen stress Ruegeria pomeroyi DSS-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria pomeroyi; 1501.9189 889.5196 1156.9941 2141.5258 1651.7724 2406.4996 1042.0326 1497.762 1962.604 1164.7368 888.7576 115377125 phoB Stress Phosphate limitation Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 1243.7501 468.1371612 582.5700079 962.6757 3179.830881 1007.7248 646.4506 537.7565 776.223 999.6429 982.1018 1098.1347 103486874 nitA Organic Remediation Aromatics Other aromatics Sphingopyxis alaskensis RB2256 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingopyxis;species:Sphingopyxis alaskensis; 2611.2386 4625.6368 2604.0219 3108.5574 5644.6519 3382.3645 3861.0621 3036.0421 3681.5997 3998.8396 1804.9444 3214.6329 258575777 cat_fun soil_benifit Uncinocarpus reesii 1704 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Onygenaceae;genus:Uncinocarpus;species:Uncinocarpus reesii; 503.8080782 2017.618 1279.5474 1012.5621 1286.9733 1611.9438 1738.875 1279.93 1213.41145 2037.5867 964.7318855 2071.2364 189348680 clpC Stress Protein stress Burkholderia multivorans ATCC 17616 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 3330.0143 5119.2111 5116.096 4031.3185 3527.9145 5791.2093 3648.5188 4156.123 5994.6009 5075.9553 2507.7602 5449.2339 1402841 lip Carbon cycling Carbon degradation Lignin superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Gelatoporia; 1839.4457 2751.6656 2590.3693 1920.5985 1761.2461 2637.8854 2356.6156 2403.4083 3020.3945 2999.6545 888.5979243 2896.5505 188028921 nmoA Organic Remediation Aromatics Nitoaromatics Erwinia tasmaniensis Et1/99 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Erwinia;species:Erwinia tasmaniensis; 2896.3257 1579.1721 2338.5018 2674.0719 1671.2451 1621.112 1313.9031 2605.9288 1683.7839 2444.8718 2395.1569 2067.4051 78518060 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1533.3505 1633.3917 2531.7025 1390.7919 1040.5372 1974.4095 1569.5745 2220.6377 1969.7186 2107.176 803.7430329 1712.3552 90433918 endochitinase Carbon cycling Carbon degradation Chitin Flavobacterium johnsoniae UW101 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Flavobacterium;species:Flavobacterium johnsoniae; 6060.4511 3783.2264 5637.0458 5441.6842 4955.7382 5088.9368 3787.9509 6036.5339 4912.9622 4969.2264 6963.5313 2738.6835 187236228 mcrA Carbon cycling Methane Methane production uncultured archaeon superkingdom:Archaea; 929.4209 567.6695083 780.0579 1297.3063 781.5296527 599.0996381 454.4045 863.3959 958.729 759.7780127 6572983 phzF soil_benifit Pseudomonas chlororaphis superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 702.1196 391.9110058 584.7781 435.5395447 585.7727893 406.3693877 356.3694341 753.5999 317.0015726 615.4564 83360723 CopA Metal Resistance Copper Rhodobacter sphaeroides ATCC 17025 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 3778.6933 1741.6142 3159.0958 3492.047 2175.493 2312.9151 1908.5541 2755.7192 2368.1006 2717.4448 4693.1342 2949.8046 84519016 Al Metal Resistance Aluminum Prochlorococcus marinus str. MIT 9211 superkingdom:Bacteria;phylum:Cyanobacteria;order:Prochlorales;family:Prochlorococcaceae;genus:Prochlorococcus;species:Prochlorococcus marinus; 907.3837764 1433.7031 1351.1253 1236.5715 3338.7363 974.6115 2020.71 867.5979 1117.4592 800.0984 1356.8375 895.047 207087270 gyrB other category gyrB beta proteobacterium KB13 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria; 892.9433 936.6288 501.0613859 903.2559 1640.7582 674.4688 744.0851 918.6538 807.8246 865.4892 986.8104939 959.8912 88949311 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Halorhodospira halophila SL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Halorhodospira;species:Halorhodospira halophila; 15262.8642 20331.3076 13770.9284 14540.5664 26447.4336 18298.7939 16438.6944 13501.9166 21801.9862 20168.6067 8944.1436 11507.3922 223586016 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2530.3762 1648.772 2246.6268 2336.6745 2668.7632 1908.198 2609.4653 1415.5584 1796.5456 2144.5613 1960.1434 2945.1219 89343546 bphC Organic Remediation Aromatics Polycyclic aromatics Mycobacterium flavescens PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 4262.1038 3628.1495 4096.1657 4652.1863 4834.966 3488.6888 3359.4691 3378.5688 3029.8417 3693.493 6644.6768 4825.2452 46240687 pcaG Organic Remediation Aromatics Other aromatics bacterium SB2 superkingdom:Bacteria; 637.7117 1029.8873 936.1539 984.363 1024.0505 667.7806 1139.8717 1110.3136 970.9045 158424074 nmoA Organic Remediation Aromatics Nitoaromatics Azorhizobium caulinodans ORS 571 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Azorhizobium;species:Azorhizobium caulinodans; 913.750722 567.1202 687.7758 856.0953 518.6588392 835.7438017 571.3206 211998851 endoglucanase Carbon cycling Carbon degradation Cellulose Penicillium decumbens superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium; 2294.63265 2247.429183 2165.1475 2145.1146 4863.0071 2594.3027 2511.7619 2455.2609 2302.85495 2311.2652 3211.70505 2712.3723 121594942 CopA Metal Resistance Copper Acidovorax sp. JS42 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax; 9072.9527 12248.0167 13494.5182 5566.5919 2141.5933 12069.8739 11201.9964 15444.7612 14774.6605 10000.4042 1929.9925 13826.2641 84386611 CadA Metal Resistance Cadmium Vibrio splendidus 12B01 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio splendidus; 1229.08205 3469.7086 2204.0188 1182.45255 3492.84885 1766.91345 2345.37475 2337.3411 2129.6935 1829.8517 2459.47075 1367.0896 142202 Catechol Organic Remediation Aromatics Other aromatics superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 3116.79 2254.4129 3239.63 2458.5276 2560.3526 2952.2366 2550.5772 3051.4629 2496.2622 2505.528 2997.814 3400.8161 160898309 alkJ Organic Remediation Other Hydrocarbons Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 1523.9613 415.2171974 1045.2145 977.4828 912.5224 481.0804343 751.1049 569.9176 990.5207 981.5421 1443.5423 676.7164 118618420 ureC Nitrogen Ammonification Mycobacterium ulcerans Agy99 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium ulcerans; 5009.597432 4954.572677 4447.148798 5019.902474 2966.763992 5152.39598 3850.708862 3869.9417 4132.00585 3616.538625 5612.9162 3908.645858 150865883 tre_fun soil_benifit Scheffersomyces stipitis CBS 6054 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Debaryomycetaceae;genus:Scheffersomyces;species:Scheffersomyces stipitis; 1523.9076 1536.2552 1698.3137 1879.725 1823.4523 1295.2893 1211.279 1593.9753 1456.5597 1534.7168 2454.6898 1425.6238 29243106 DNA_polymerase_type_I Bacteria phage REPLICATION Streptomyces phage phiBT1 superkingdom:Viruses;order:Caudovirales;family:Siphoviridae;genus:PhiC31-like viruses; 4232.232326 7310.371192 5995.01294 4776.552612 8483.084 6221.82256 6151.183731 6187.508322 6555.91473 7310.706389 5966.077263 6559.838508 77965235 proO Organic Remediation Aromatics Other aromatics Burkholderia sp. 383 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 2049.88784 1218.72345 1608.954 2066.220585 1972.8629 2546.0238 1684.7413 1388.694547 1631.702487 1753.03169 3314.7466 1841.494898 163813453 glnA Stress Nitrogen limitation Dehalococcoides sp. VS superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides; 1597.221 620.6134 1047.1483 1395.86 813.7433 761.5144 914.0624 801.5933 981.0152 1122.8758 1470.9784 857.3351094 89088349 BADH Organic Remediation Aromatics Other aromatics Bacillus sp. NRRL B-14911 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 364.890459 494.2849497 730.013 572.2575 492.4525705 833.8996 501.3353 554.2914 724.7934 116252631 ArsC Metal Resistance Arsenic Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 445.4444101 807.432 973.1568 495.329151 599.1771576 815.7907 756.7139 968.6202 845.771 825.4351 984.9252 302306404 chitin_synthase Fungi function major biomolecule Ashbya gossypii ATCC 10895 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Eremothecium;species:Eremothecium gossypii; 4501.2568 2942.8039 3423.9762 3820.7054 1337.7848 4304.0009 4170.0357 4170.1277 2936.6969 4705.1845 2178.1666 3150.8874 241772456 hrcA Stress Heat shock Asticcacaulis excentricus CB 48 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Asticcacaulis;species:Asticcacaulis excentricus; 1296.0421 2693.4321 1931.4689 1187.8494 3631.1809 2050.8361 1936.4841 2190.3649 1817.2574 2262.6353 763.1415 1918.0658 254970904 sigma_24 Stress Sigma factors Acidithiobacillus caldus ATCC 51756 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus;species:Acidithiobacillus caldus; 25013.6106 21665.2833 18618.2765 19290.4709 28516.7721 20529.4943 23882.8377 22412.6099 20626.5037 22247.4423 19984.9865 15532.9204 91696320 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 2704.0692 866.1879 1440.4705 2192.5354 1343.8708 1321.7021 1353.9227 2003.015 1157.3451 1445.5862 2400.6105 1251.6486 212546851 chitin_synthase Fungi function major biomolecule Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 4095.3866 2166.9098 3075.4792 8232.857573 3051.1012 2503.8322 2836.2547 1528.3702 4034.7605 4008.7554 5221.219 3516.8545 38194106 Xamo Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 1797.6578 913.654 1091.581 1592.7619 871.02 1330.4216 1566.3972 1641.412 1225.0487 1083.0339 1287.7428 1488.5179 44985539 cat_fun soil_benifit Ashbya gossypii ATCC 10895 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Eremothecium;species:Eremothecium gossypii; 2838.2847 1462.4758 1430.9907 2523.1663 1955.0315 1900.6899 3000.9212 1793.2359 1907.6531 2080.2872 1123.6788 2171.6885 145569838 pcaG Organic Remediation Aromatics Other aromatics Pseudomonas stutzeri A1501 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas stutzeri; 2767.7786 894.2492705 1329.7087 2314.6352 1315.0144 1179.4678 1165.6963 1692.7583 1300.2543 1754.9304 2833.3897 1710.6524 145607389 sidA Fungi function iron Magnaporthe grisea 70-15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe;species:Magnaporthe oryzae; 549.7571 1068.6799 700.0181 810.3182 847.4154 974.1928 867.6768 669.6447 1028.4263 1038.558 1053.944 159172299 gyrB other category gyrB Vibrio campbellii AND4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 1713.084476 671.1504 603.965 702.8287578 438.380545 549.6992 316.9642317 600.8288 699.5334 562.0925 89093170 ZntA Metal Resistance Zinc Oceanospirillum sp. MED92 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Oceanospirillaceae;genus:Neptuniibacter; 8490.1253 12674.1787 9730.7543 10573.0647 5910.73 13825.2186 13562.1907 9548.298 13052.1206 11885.2004 5308.8608 12816.8953 118424311 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1175.2186 1471.7269 1146.6856 552.6532066 1239.5365 877.979 976.0017 1954.489 969.4012 1109.2974 1776.1149 997.6826 110600695 mer Metal Resistance Mercury Geobacter sp. FRC-32 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 2686.8759 2215.2295 2745.6074 2708.0555 2193.2391 2379.4258 1909.4373 1616.7072 2250.0619 2336.1217 3813.6896 2507.4307 158141894 ChrA Metal Resistance Chromium Alkaliphilus oremlandii OhILAs superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Alkaliphilus;species:Alkaliphilus oremlandii; 509.4602 568.7847 482.3857 580.2745336 449.1971 421.8779 324.4746187 84500843 pimF Organic Remediation Aromatics Aromatic carboxylic acid Oceanicola batsensis HTCC2597 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola batsensis; 7113.2208 2914.1077 5446.6367 4409.5346 4026.5124 4365.7404 4585.9002 7554.2523 4115.709 4904.2153 6039.7132 5207.3615 146309341 ChrA Metal Resistance Chromium Pseudomonas mendocina ymp superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas mendocina; 2128.8176 681.0896 1045.9415 2633.6505 803.2572425 1575.4954 2061.2687 2472.2856 916.6315 1198.026 1337.9565 104345788 endolysin_glycosidase Bacteria phage LYSIS Aeromonas salmonicida bacteriophage 25 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 808.7721 827.0301 1062.9673 859.5334 443.7348569 630.5414 1084.7002 730.0971 568.3165 1058.3318 802.8892 259026864 pstB Stress Phosphate limitation Ferroglobus placidus DSM 10642 superkingdom:Archaea;phylum:Euryarchaeota;class:Archaeoglobi;order:Archaeoglobales;family:Archaeoglobaceae;genus:Ferroglobus;species:Ferroglobus placidus; 507.4616842 568.1651 641.3222 597.1747 329.5978528 313.7864756 8662.795632 28279.8066 52787891 cellobiase Carbon cycling Carbon degradation Cellulose Bacillus licheniformis ATCC 14580 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus licheniformis; 633.5110884 617.289142 961.3608 872.4302 1296.9042 917.2739 816.2526 616.1982 146338092 Arylest Organic Remediation Aromatics Other aromatics Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 4439.2399 4808.9894 6253.5054 6305.8336 4398.3468 6505.4318 6905.8111 4218.6658 5451.3527 4744.2113 4848.5013 5769.1519 237805326 AceB Carbon cycling Carbon degradation Others Pseudomonas syringae pv. oryzae str. 1_6 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas coronafaciens; 1997.76545 1177.81643 1527.062942 1863.5551 806.0362 2180.0285 1347.52013 1978.2255 1347.60135 1416.4362 2329.221122 1213.43835 110335215 CopA Metal Resistance Copper Acidovorax sp. JS42 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax; 4079.9797 2674.2801 3502.8238 4506.335 4794.3546 2986.5463 2872.0074 1936.1631 3575.8274 3702.0912 5767.2502 3839.7981 21464540 sqr Sulphur sulfide oxidation Thiobacillus denitrificans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Hydrogenophilales;family:Hydrogenophilaceae;genus:Thiobacillus; 8785.7567 6071.7129 4316.4243 7399.1016 7098.7914 6630.1224 5149.2605 4274.987 6295.5279 5836.4017 9437.9694 6483.7558 118705674 nagI Organic Remediation Aromatics Aromatic carboxylic acid Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 1155.2716 3312.4018 1520.4667 1154.9342 2705.7532 1576.0338 2673.4004 1305.6637 1729.3428 1444.1569 1465.2365 935.6536 78217815 hydrogenase Energy process Energy process Desulfovibrio desulfuricans G20 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio alaskensis; 1108.769 1528.5077 1767.6816 871.1215 1075.0815 1523.8513 1364.1198 2525.6291 1592.4096 1425.6541 1753.4012 167357559 xylA Carbon cycling Carbon degradation Hemicellulose Rhizobium leguminosarum bv. trifolii WSM1325 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 927.433 591.7589927 973.8255 639.6602 2566.955153 627.4651 728.1029 160369828 B_lactamase Antibiotic resistance Beta-lactamases Achromobacter xylosoxidans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Achromobacter; 2207.5578 3729.8224 3751.5508 1762.6523 4233.1334 2679.3292 3408.3667 2360.0911 2793.0422 2308.1051 3130.4539 2584.3456 225194091 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 790.2355 833.3504 1072.4034 909.2554 1322.9964 892.7259 1049.8699 765.9584 904.9942 901.8918 1680.6892 1340.5793 118424511 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 994.8228 2215.9049 1323.4712 909.3636139 2590.9343 1583.826 1517.7864 927.732 1670.9001 1713.5364 1795.4908 32471234 cap virulence capsule Rhodopirellula baltica SH 1 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Rhodopirellula;species:Rhodopirellula baltica; 6573.5782 4948.8772 4969.887 5804.1207 2035.1545 6744.6278 7215.4958 3950.3988 6110.9272 5831.1758 5299.8275 4047.9942 189424595 cap virulence capsule Geobacter lovleyi SZ superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter lovleyi; 1978.26175 2046.4289 1924.06825 1885.93 2834.0524 3110.519 1377.893372 1817.006597 1653.881997 1346.902428 3672.2567 1853.99816 111224696 CysJ Sulphur sulfite reductase Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 4416.3916 5225.1485 6084.6002 5459.9704 7133.9613 6207.1287 4905.3117 4848.3422 5081.4524 5825.4139 8175.4284 6618.7036 115422864 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Bordetella avium 197N superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella avium; 3265.76085 1412.90725 2319.7749 2545.345588 1618.76515 1363.517394 2785.9233 2269.139987 1769.241074 1809.99732 2774.493081 2577.191 206569030 proO Organic Remediation Aromatics Other aromatics Klebsiella pneumoniae 342 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella pneumoniae; 6613.40504 8120.2061 8789.6715 12559.7811 6385.0976 10147.9909 6396.825033 11226.0712 7520.332 11197.8348 7361.7631 6572.3295 91791814 ppx Phosphorus Phosphorus utilization Shewanella denitrificans OS217 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella denitrificans; 1034.8376 908.1259477 1226.0518 19373.5022 1175.5792 981.5647 1109.20535 1085.4362 1230.3417 2053.62291 1393.2429 218658533 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 1422.2519 623.3913 635.7535 1564.2162 992.1525 953.2689 828.6437 1027.5196 1092.9498 745.0255 1269.6763 1053.1338 2776 cat_fun soil_benifit Pichia angusta superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Pichia; 1348.1459 1105.9136 734.6657 1582.886 893.4681 1501.2224 1439.3874 1930.8493 1014.9485 1730.0962 1291.0341 759.396328 169606652 sid_fun soil_benifit Phaeosphaeria nodorum SN15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Phaeosphaeriaceae;genus:Phaeosphaeria;species:Phaeosphaeria nodorum; 2286.6874 1171.7034 1312.5521 2018.933 1531.6286 2546.1038 2259.553 1443.6527 2240.2578 1020.3249 1160.0264 19909557 gyrB other category gyrB Synechococcus sp. superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus;species:Synechococcus elongatus; 1221.7883 1392.9907 1522.2841 1371.9578 1401.0907 1584.8131 1002.8191 866.9201 875.1846 1294.4483 2327.7919 5644.672141 23099425 hrcA Stress Heat shock Oceanobacillus iheyensis HTE831 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Oceanobacillus;species:Oceanobacillus iheyensis; 455.3172055 392.3315111 539.7348 487.179136 531.8117915 320.8919272 481.2296 297.0470033 452.9447 495.7498524 160356574 pstB Stress Phosphate limitation Bacillus selenitireducens MLS10 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus selenitireducens; 8320.9321 4939.2948 7518.906 9440.8684 8636.8837 3645.64 5081.2306 6384.8464 3097.6269 4364.3621 7555.1612 5158.8039 94968349 ChrA Metal Resistance Chromium Acidobacteria bacterium Ellin345 superkingdom:Bacteria;phylum:Acidobacteria;genus:Candidatus Koribacter;species:Candidatus Koribacter versatilis; 2710.6779 1566.5188 1945.703 2660.9771 709.7110572 1410.1835 1668.9869 952.0252 1763.3111 14602.49682 1573.9959 1346.4568 115384272 chitin_synthase Fungi function major biomolecule Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 530.6996924 579.4677 797.4472 684.5201 1171.1684 938.8511 790.0463 1242.7215 913.4397 820.8904 789.2915505 94310443 rubisco Carbon cycling Carbon fixation Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 705.9747 911.5967 707.573 667.1551 394.301576 560.5731 435.4955 403.3544007 209525334 SmtA Metal Resistance Miscellaneous Arthrospira maxima CS-328 superkingdom:Bacteria;phylum:Cyanobacteria;order:Oscillatoriales;genus:Arthrospira;species:Arthrospira maxima; 981.3838 904.4156 660.8363139 931.1372 988.9863 782.4831 842.4194 577.4222 766.6025977 1013.333 1300.2356 699.4022 77163721 sigma_38 Stress Sigma factors Nitrosococcus oceani ATCC 19707 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Chromatiaceae;genus:Nitrosococcus;species:Nitrosococcus oceani; 1992.6947 1340.0071 1667.9989 1675.6182 571.6290005 927.0206 1325.6257 1766.0497 1096.8289 1232.9882 991.2009 26278688 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 673.4014 2212.3497 977.8095 882.0247 1647.8112 1477.7112 1617.7265 564.0349 1280.9287 1452.0404 2103.546031 1356.3166 188579633 katE Stress Oxygen stress Methylobacterium populi BJ001 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 4389.6479 5245.6003 6050.098 4529.9495 5724.4526 4408.8744 3289.6269 4391.0548 4679.9835 6938.2399 4979.7237 5122.6604 289624496 impH soil_borne_pathogen secretion system type IV Pseudomonas syringae pv. aesculi str. NCPPB3681 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas amygdali; 2101.0799 1828.6331 1550.9124 2056.1355 1294.7467 2389.9849 1524.2097 1168.7886 1365.9659 1350.4816 1002.258313 1293.6147 196186424 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Brevundimonas sp. BAL3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Brevundimonas; 1901.56335 1545.8397 1512.5936 1941.35705 2785.22215 1796.3474 1901.68915 1713.4324 2433.81225 1966.9757 2081.17935 2012.25595 217991638 ppk Phosphorus Phosphorus utilization Bacteroides pectinophilus ATCC 43243 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides pectinophilus; 831.0428 1548.9468 1007.0484 1263.1857 1089.9843 1288.1066 1318.3126 1216.6732 1011.6803 712.6677 157847593 CopA Metal Resistance Copper Shewanella pealeana ATCC 700345 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella pealeana; 639.0147 935.4565 1001.1017 1252.2962 958.2344 1784.171 761.4435 966.256 1723.7872 847.8281761 602.6832919 196477574 narI Stress Oxygen limitation Phenylobacterium zucineum HLK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Phenylobacterium;species:Phenylobacterium zucineum; 881.293 11801.52146 824.3855 631.619 380.5028561 356.8964474 650.4417 495.7122 516.7465429 84384707 pimF Organic Remediation Aromatics Aromatic carboxylic acid Janibacter sp. HTCC2649 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Intrasporangiaceae;genus:Janibacter; 1410.6464 4553.1061 4137.9376 2765.3248 1718.6629 4287.6237 4234.808 4363.6145 5057.0828 3949.1154 857.1016721 5493.5574 109900027 xylA Carbon cycling Carbon degradation Hemicellulose Pseudoalteromonas atlantica T6c superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Pseudoalteromonadaceae;genus:Pseudoalteromonas;species:Pseudoalteromonas atlantica; 427.0689215 836.5215 452.4443119 126952448 dsrB Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 914.8335 835.2108 862.1506877 1120.2521 1278.8207 1014.814 707.2886 984.1379 940.4419 850.1911 2523.1359 1350.9747 256036088 sigma_24 Stress Sigma factors Chitinophaga pinensis DSM 2588 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;genus:Chitinophaga;species:Chitinophaga pinensis; 814.7944175 962.1903 828.4916688 668.4362202 637.078 552.2456 1827.3699 702.8502 8520.922237 1897.8716 975.7383 254559458 fnr Stress Oxygen stress Methylobacterium extorquens DM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 3274.2702 895.2792 2448.4785 2595.2289 1640.9288 999.9924 1652.6419 1239.3928 1655.8497 2062.9904 2149.2651 1508.1826 221155820 pstS Stress Phosphate limitation Thermomicrobium roseum DSM 5159 superkingdom:Bacteria;phylum:Chloroflexi;class:Thermomicrobia;order:Thermomicrobiales;family:Thermomicrobiaceae;genus:Thermomicrobium;species:Thermomicrobium roseum; 3132.3446 4049.7497 3997.1954 2912.6143 4368.6372 2651.8695 3315.8019 1759.8765 2644.5415 2665.0965 3865.0141 3368.4627 118470319 sid_bac soil_benifit Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 1716.7013 2222.1487 2245.4491 1392.0521 1299.8468 2411.492 1832.5753 2259.5651 2319.676 2489.4706 1322.7466 2085.367 167519689 mer Metal Resistance Mercury Monosiga brevicollis MX1 superkingdom:Eukaryota;order:Choanoflagellida;family:Codonosigidae;genus:Monosiga;species:Monosiga brevicollis; 4181.5279 1959.524667 2319.1788 4349.0326 5442.8466 2564.4799 3015.031773 1748.1898 3047.0006 2031.735043 4040.8422 2908.3329 254424042 sigma_70 Stress Sigma factors Synechococcus sp. PCC 7335 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 809.484 896.9867 979.118 561.4196093 676.9665 755.7848 881.667978 620.7951 828.2826 1115.005766 859.1781 227823338 phzF soil_benifit Sinorhizobium fredii NGR234 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium fredii; 4645.513 6379.281 4793.712 5132.83925 5001.7909 3997.1577 4562.4551 3499.4057 4393.4546 4351.5319 5407.73405 3144.98245 78191087 replicase_Carmovirus soil_borne_pathogen replication Angelonia flower break virus superkingdom:Viruses;family:Tombusviridae;genus:Carmovirus; 3874.9088 3184.7851 3869.6259 3907.2738 4911.0506 3432.7672 2663.6392 3738.0899 2693.8049 2697.7695 6506.9437 4813.504 56686906 glnA Stress Nitrogen limitation Synechococcus elongatus PCC 6301 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus;species:Synechococcus elongatus; 2193.1046 2397.3843 2337.5858 2054.8068 1922.2694 1749.6015 1404.5982 3174.2849 1586.6783 2211.2808 3166.707 1868.2174 221723831 catechol_B Organic Remediation Aromatics Other aromatics Agrobacterium radiobacter K84 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 2522.7198 890.2990685 1044.345576 2150.5799 1302.840133 899.1272 1283.9314 804.708588 875.1729 1269.2792 2825.1012 1203.622581 21040221 exoglucanase_fungi Fungi function carbon degradation Talaromyces emersonii superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces; 1291.3542 1144.4344 1244.769 1555.4635 1078.5321 1376.2627 1777.5756 1636.6913 1379.0011 1072.9171 1479.7955 1486.5405 169597295 phospholipase_D_fungi Fungi function carbon degradation Phaeosphaeria nodorum SN15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Phaeosphaeriaceae;genus:Phaeosphaeria;species:Phaeosphaeria nodorum; 660.681 1043.6662 654.6133938 817.4683 886.8702 1013.109 985.9808 415.263572 1088.3019 902.9079 866.9278 542.7829884 160917807 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 4083.9154 3738.4618 2090.9089 4193.7575 5731.6193 3395.4064 5800.2877 2703.4045 3843.019 3521.6414 3833.2216 3595.0327 169832179 fnr Stress Oxygen stress Candidatus Desulforudis audaxviator MP104C superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Candidatus Desulforudis;species:Candidatus Desulforudis audaxviator; 2909.9057 1365.5177 2479.7529 2869.6315 2408.1454 1471.9979 1914.3122 1668.1745 1938.7674 2607.4218 2016.9856 2712.1251 161384634 PobA Organic Remediation Aromatics Aromatic carboxylic acid Phaeobacter gallaeciensis 2.10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 9065.9992 5997.263767 6355.970067 6499.397967 5469.573233 7166.549633 6273.4078 8253.140867 4869.779567 7233.212867 8649.21765 6930.139533 247547018 katE Stress Oxygen stress Paenibacillus sp. JDR-2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 2488.4674 1962.4045 1554.5327 2267.4472 2818.6952 1735.4828 2417.0293 2399.3936 1655.8497 1583.6594 2359.5044 2894.5868 5777669 sigma_24 Stress Sigma factors Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 6796.0036 4385.3886 4552.5601 6065.9489 6544.3956 5588.3571 3947.7541 4345.2402 5134.7114 5087.7471 8207.4292 5302.5404 120587758 oxyR Stress Oxygen stress Acidovorax citrulli AAC00-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax citrulli; 4965.9203 6683.7123 9248.7412 6200.8832 6436.0798 4917.8219 5032.9409 9775.0595 6659.3241 7979.422 5692.5817 9431.5143 146397081 pstB Stress Phosphate limitation Geobacter uraniireducens Rf4 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter uraniireducens; 2400.4993 1815.4701 2198.0067 1912.4895 2150.7887 1836.1087 1444.3081 1661.4567 1493.7315 1679.2107 2407.7458 2450.8122 225700175 nplT Carbon cycling Carbon degradation Starch Streptococcus equi subsp. equi 4047 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus;species:Streptococcus equi; 1324.2096 2770.9578 1726.6948 629.9218 1954.2731 891.5294 1636.6868 1057.1266 1076.0588 1130.7147 1806.8664 627.5799563 89335325 grpE Stress Heat shock Desulfitobacterium hafniense Y51 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium;species:Desulfitobacterium hafniense; 762.2829 487.1363584 589.0818 794.9633 441.0738662 347.6862792 377.1764814 390.4129536 760.6362 565.3709398 541.0115214 218432079 BADH Organic Remediation Aromatics Other aromatics Escherichia coli superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia;species:Escherichia coli; 4359.839886 3320.46332 4077.292157 2313.816673 2681.992265 3595.749454 3025.601615 4504.829631 3672.106704 3857.722715 4189.5785 3156.301067 90338104 MATE_antibiotic Antibiotic resistance transporter Aurantimonas sp. SI85-9A1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Aurantimonas;species:Aurantimonas manganoxydans; 2105.2708 2936.8404 1685.2427 2404.5457 1116.3185 2729.5225 1916.4342 1924.3736 1892.9988 2187.5521 1110.3451 1808.7426 209516215 cellobiase Carbon cycling Carbon degradation Cellulose Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 9359.2352 11498.4231 20951.9803 8634.3992 8541.4225 11052.8613 10412.9365 18649.3109 12917.191 12399.7951 8809.8701 18343.1494 33391427 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 477.4403267 1439.9979 794.612 660.659 1808.8345 938.5968 1147.3325 437.4871391 1069.2093 1215.1554 982.6303 1020.5881 110621572 nifH Nitrogen Nitrogen fixation uncultured methanogenic archaeon superkingdom:Archaea;phylum:Euryarchaeota; 1251.724855 2657.815927 1244.725356 1174.787989 2032.26125 1197.581544 1440.02515 1267.33184 1282.936536 952.3675 1687.711257 1378.563 84786366 oxyR Stress Oxygen stress Erythrobacter litoralis HTCC2594 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter;species:Erythrobacter litoralis; 4743.3337 5821.9843 4906.6838 5074.8645 6134.5284 5038.3995 8082.0142 3532.9951 4412.3259 4252.1058 4083.3898 3959.2009 133738729 pbrA Metal Resistance Lead Herminiimonas arsenicoxydans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Herminiimonas; 1000.0614 2582.9797 1885.4369 2041.0682 1509.8426 2194.1473 1619.3094 1777.5608 2108.772 2175.9167 704.0649625 2138.5524 77378626 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1579.9068 1496.9317 1120.3546 1939.6517 2518.6037 1164.4367 2378.9252 1215.0027 1228.0192 1120.5085 1711.3206 1375.6655 67524391 nagG Organic Remediation Aromatics Aromatic carboxylic acid Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 1712.0806 1300.4032 1697.6158 1600.7339 2221.9059 1390.0972 1454.0119 1387.658 1374.8075 1228.4323 2122.6458 1746.535 255062774 pilin virulence pilin Nitrosomonas sp. AL212 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas; 2325.2516 1457.280477 1861.023874 1580.329014 2298.365691 1881.292812 1923.9472 3021.2264 2349.4818 1474.250173 2764.93129 2322.921959 256421425 fnr Stress Oxygen stress Chitinophaga pinensis DSM 2588 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;genus:Chitinophaga;species:Chitinophaga pinensis; 1733.1559 1341.5617 1178.138358 1503.3718 1775.7691 1302.9918 1448.6878 1040.4946 845.3449 2697.7948 1332.3674 1652273 POBMO Organic Remediation Aromatics Aromatic carboxylic acid Synechocystis sp. PCC 6803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechocystis; 2405.0394 935.6221 2108.0946 2710.4114 1324.1549 1567.441 639.4117291 2185.0143 2333.0733 2943.3743 1013.6258 119387816 bclA Organic Remediation Aromatics Aromatic carboxylic acid Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 2047.0955 3011.6902 2365.4434 1984.922 4283.926 1827.2845 2821.676 1481.3088 1665.9726 1897.5483 2810.2299 1953.3991 217969709 fnr Stress Oxygen stress Thauera sp. MZ1T superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Thauera; 902.1131 578.3369 743.374 2756.276 161382919 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Phaeobacter gallaeciensis 2.10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 3206.558 2497.4899 4306.9591 3931.0664 864.1172456 1416.3156 2152.7897 2393.5352 2512.6872 2792.6174 1574.668461 2326.1088 152998320 sigma_32 Stress Sigma factors Marinomonas sp. MWYL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Oceanospirillaceae;genus:Marinomonas; 706.9149 584.5683916 629.4204 494.8039733 624.762 555.9775 780.1989237 217399578 pcc Carbon cycling Carbon fixation Bifidobacterium gallicum DSM 20093 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium gallicum; 784.9163 1030.1591 561.5565844 555.8355 557.0975 651.113 805.3842 615.08155 583.872 116105044 gyrB other category gyrB Lactobacillus casei ATCC 334 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus casei; 430.8299864 656.1574586 490.9665 56311881 sigma_38 Stress Sigma factors Aromatoleum aromaticum EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 1770.8603 1721.4682 2225.1374 995.0567 2084.8317 1766.9656 2734.5972 2601.3356 2169.3955 1902.562 558315 rgh_fungi Fungi function carbon degradation Aspergillus aculeatus superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus; 3189.0154 3131.0625 4863.3707 2554.0131 2110.2215 4453.6385 3055.5539 3942.7247 2390.50032 1944.363178 1431.8904 4237.226 223490813 catB Organic Remediation Aromatics BTEX and related aromatics Cyanobium sp. PCC 7001 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanobium; 2483.9541 2607.0886 2466.6964 4688.4299 3628.0967 2936.8466 2537.8796 2123.9488 2094.735 2382.0605 3446.8579 2958.8405 22777932 alkH Organic Remediation Other Hydrocarbons Oceanobacillus iheyensis HTE831 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Oceanobacillus;species:Oceanobacillus iheyensis; 904.0742 609.8729564 782.0644 605.7447333 1106.5923 938.4024 611.0534 605.8262 672.4287 1410.1481 757.1304981 84691156 amyA Carbon cycling Carbon degradation Starch Parvularcula bermudensis HTCC2503 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Parvularculales;family:Parvularculaceae;genus:Parvularcula;species:Parvularcula bermudensis; 2410.7213 5961.0311 3751.4054 3980.0487 5732.4535 6367.8938 4411.2775 5035.6316 4473.145 5373.2174 3577.7199 6456.8267 222086739 B_lactamase_C Antibiotic resistance Beta-lactamases Agrobacterium radiobacter K84 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 2515.238 2150.3062 2777.4925 1044.039 707.8719854 2625.9502 2071.3625 2510.4745 2267.0694 1794.3368 2163.8199 193290569 CadA Metal Resistance Cadmium Pseudomonas stutzeri superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 3274.98885 2727.51845 2018.25505 3413.3958 3850.8144 2181.66625 3357.7658 1927.0002 2261.83905 2086.6521 3477.95775 2505.0001 27351195 chnB Organic Remediation Other Hydrocarbons Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 4067.622 2879.0529 4831.1657 1648.2095 1832.0789 3652.7144 2837.9867 5040.4006 3777.354 3712.3197 1499.8079 4585.2174 89346817 nagG Organic Remediation Aromatics Aromatic carboxylic acid Rhodoferax ferrireducens DSM 15236 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Albidiferax;species:Albidiferax ferrireducens; 630.3544804 592.0446 867.0331 412.9249651 747.0965 628.3505 741.9798 777.6946 714.0384572 645.4868788 145298100 CorC Metal Resistance Cobalt Aeromonas salmonicida subsp. salmonicida A449 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas;species:Aeromonas salmonicida; 597.4182976 1032.6057 750.6470092 582.3356984 796.9159 995.0996 630.0274 1529.1442 731.8826 984.7204 742.6454 161162837 nitro Organic Remediation Others Sorangium cellulosum 'So ce 56' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Polyangiaceae;genus:Sorangium;species:Sorangium cellulosum; 1917.8231 3128.2591 2063.2402 3041.7546 2838.6027 3375.2304 2451.1876 1867.3745 2841.5483 3114.5349 1192.293 3123.1755 67522288 p450aro Fungi function organic remediation Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 765.8693 849.3168 661.0813 617.3748 1465.155 1072.6201 560.5041 937.6212 1117.599 968.8123 1034.8561 167034241 xylC Organic Remediation Aromatics BTEX and related aromatics Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 3780.8156 5106.4771 4635.7405 4404.0419 6532.3563 4373.9365 3645.1007 2496.5183 4811.0573 3505.1039 7141.3614 5406.9475 161160361 sped_bac soil_benifit Sorangium cellulosum 'So ce 56' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Polyangiaceae;genus:Sorangium;species:Sorangium cellulosum; 731.7378 623.5584948 511.0936637 887.4626 1386.4867 618.2533438 606.2805 671.3158 39934494 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 960.1272 1947.8397 870.668 1376.4369 1088.0877 2472.8278 1556.1084 959.7236 1788.0302 1730.0627 651.6432827 1362.2627 22023074 mcrA Carbon cycling Methane Methane production uncultured methanogenic archaeon superkingdom:Archaea;phylum:Euryarchaeota; 748.9849 1224.0626 1334.0123 518.8477659 1498.65 961.9277 1335.6338 1479.3101 1291.3887 1406.8104 120402742 alkB Organic Remediation Other Hydrocarbons Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 3195.1137 3460.3811 4608.5953 2881.3155 2868.9948 2063.8182 2276.8517 6772.4131 2665.1252 2982.38 7185.0622 4520.3733 110592191 nirS Nitrogen Denitrification uncultured organism 3682.7867 4505.4617 5835.6261 4307.4743 5323.4774 3894.2135 4451.7101 7276.3745 4461.5892 5529.3355 6756.199 5838.514 26984389 endochitinase Carbon cycling Carbon degradation Chitin Aeromonas punctata superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas; 2999.2439 4640.278 5222.8449 3458.5702 3417.7028 2748.5768 2704.737 7086.4221 3076.4491 3696.9211 6735.2976 4888.9358 163745788 ArsC Metal Resistance Arsenic Oceanibulbus indolifex HEL-45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 2053.6908 2530.646 2390.2187 2008.0845 3732.1846 2147.364 2090.5178 2462.7353 2359.1542 2564.5203 1900.6585 2646.9239 46519937 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2645.1283 5674.1197 3057.9737 3476.5003 5486.9654 4549.613 4627.4798 1883.6669 4522.1054 5219.098 2830.1944 2869.9785 254473489 ppk Phosphorus Phosphorus utilization Pseudovibrio sp. JE062 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pseudovibrio; 781.303 996.8119 1379.8699 712.3261 1057.933 811.943 1327.3061 1411.0473 960.2923 989.5393 254777365 katE Stress Oxygen stress Mycobacterium avium subsp. avium ATCC 25291 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium avium; 2987.3698 2895.8859 3906.3963 3894.083 1929.6636 4261.2259 5540.7623 2774.3356 3670.9177 2892.2891 3737.916 2715.2561 85704573 glnA Stress Nitrogen limitation Roseovarius sp. 217 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 1391.5054 931.0069 1382.546 585.3188 608.7594 570.5712 422.2261052 573.0175 1516.3849 733.0053 189207875 phospholipase_D_fungi Fungi function carbon degradation Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 1871.1727 1265.5014 1878.0072 2308.1014 554.9256788 834.1022 1416.424 1923.0905 1130.9137 1643.88 847.4918316 1163.1986 58532933 sliding_clamp_T4 Bacteria phage REPLICATION Synechococcus phage S-PM2 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 542.6379 439.8475 631.2566358 705.6975 348.799064 433.2693124 1179.8963 15891847 ChrA Metal Resistance Chromium Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 2101.4292 1628.0908 2495.7754 2004.4958 1015.7382 961.2107 1210.2122 1964.0756 1462.5123 1491.0672 1423.7461 1490.9211 124259740 pimF Organic Remediation Aromatics Aromatic carboxylic acid Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 4308.9869 2801.7056 2527.1225 4502.0751 1729.4699 3206.6132 4967.4803 4479.5734 2337.2775 4133.1496 30206.56352 1587.1162 89093569 obgE Stress Radiation stress Oceanospirillum sp. MED92 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Oceanospirillaceae;genus:Neptuniibacter; 2911.3161 1995.5351 2290.2452 3246.3271 2321.4435 1520.89 1897.6115 2108.5643 1382.4492 1736.0926 3465.3809 3638.2759 116804550 nasA Nitrogen Assimilatory N reduction uncultured prokaryote 1659.6141 2995.9531 2216.9517 1885.4095 1327.885636 2627.76 3185.959 2711.8049 1853.4273 1949.2378 1599.509898 1003.570399 260222923 MFS_antibiotic Antibiotic resistance transporter Curvibacter putative symbiont of Hydra magnipapillata superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Curvibacter; 375.3542789 581.9398 397.3919952 617.302442 578.4195 579.4988 609.4534891 677.3391 654.2423 704.03 4633570 nosZ Nitrogen Denitrification uncultured bacterium ProP superkingdom:Bacteria; 888.9629 865.2195 936.4186222 564.5775504 1009.1816 665.0902207 586.5957969 692.437621 126636898 ahpC Stress Oxygen stress Shewanella loihica PV-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella loihica; 4855.9501 1783.5627 2192.2927 2804.4495 3028.8427 2783.8139 2618.6874 4245.4525 3280.8996 3014.0927 6016.1451 2763.3056 169778415 pheA Organic Remediation Aromatics Other aromatics Aspergillus oryzae RIB40 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus oryzae; 2115.6674 1602.6057 1615.017 2419.8321 2226.3803 2105.7706 1859.5762 3271.8696 1937.9287 1970.1525 1725.6073 1684.0528 111021400 scnABC Organic Remediation Others Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 4626.91375 6017.66535 4452.84105 4609.08015 5548.5365 3102.19585 6190.86035 5859.24865 3835.05115 4744.54065 4542.9204 5674.9411 71733895 atzA Organic Remediation Herbicides related compound Pseudomonas syringae pv. phaseolicola 1448A superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas savastanoi; 3063.3227 3245.3823 2925.47535 2991.86815 2607.3438 2787.9343 3462.8044 1984.7013 3966.9754 2892.96465 2011.9164 3002.72905 74136896 phdJ Organic Remediation Aromatics Polycyclic aromatics Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 969.1268 1130.7616 1391.2252 567.1049 751.7632337 1180.5297 1202.3666 926.574 1453.4145 1358.7559 1418.4829 32895042 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 464.4351 562.6669 478.9117885 483.5848 504.4667 700.4871 91799420 pimF Organic Remediation Aromatics Aromatic carboxylic acid Nitrobacter hamburgensis X14 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter hamburgensis; 2313.0819 895.7889 1248.9418 2103.5015 1185.0658 1429.7314 2714.6129 1655.4045 1271.4115 1322.7664 1546.5358 1240.8138 5531409 alkJ Organic Remediation Other Hydrocarbons Pseudomonas putida superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 2850.0648 2428.336 3284.4262 2538.5897 3634.0879 3205.8205 2235.0197 2300.0902 1692.9749 2377.2366 4847.1559 3927.8225 70996670 endopolygalacturonase_fungi Fungi function carbon degradation Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 965.0568 772.2243 709.4687 949.4439 527.6662614 560.7456273 819.3717 738.921465 254414431 pstC Stress Phosphate limitation Microcoleus chthonoplastes PCC 7420 superkingdom:Bacteria;phylum:Cyanobacteria;order:Oscillatoriales;genus:Microcoleus;species:Microcoleus chthonoplastes; 773.6735 833.9238 465.8110292 943.2938 603.0779815 752.6305 709.3142892 562.0495 802.830098 611.3758394 228563844 sigma_70 Stress Sigma factors Dethiosulfovibrio peptidovorans DSM 11002 superkingdom:Bacteria;phylum:Synergistetes;class:Synergistia;order:Synergistales;family:Synergistaceae;genus:Dethiosulfovibrio;species:Dethiosulfovibrio peptidovorans; 774.5734 579.5314 614.8535737 345.9314996 502.0758942 406.9660435 401.2304143 148273479 pilin virulence pilin Clavibacter michiganensis subsp. michiganensis NCPPB 382 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Clavibacter;species:Clavibacter michiganensis; 3861.5706 2445.7678 2320.5746 3551.5627 1787.6946 1927.2972 2580.4227 3210.2346 2464.6936 2894.8685 1435.8545 2381.2716 218886707 dmsA Organic Remediation Others Desulfovibrio vulgaris str. 'Miyazaki F' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 3886.3128 5392.9425 5639.9537 3796.2964 2351.9494 5052.4135 4510.9652 5789.4857 4990.0665 5177.0675 4910.653 5834.3393 206986905 iron_permease_high_affinity Fungi function iron Cryptococcus neoformans var. neoformans JEC21 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Tremellomycetes;order:Tremellales;family:Tremellaceae;genus:Filobasidiella;species:Cryptococcus neoformans; 1526.3522 1703.7051 2474.5477 1269.1031 1430.5159 2152.3295 1767.4818 2512.4717 2244.1559 1529.1336 1281.496252 2305.6613 51855367 nitro Organic Remediation Others Symbiobacterium thermophilum IAM 14863 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiales Family XVIII. Incertae Sedis;genus:Symbiobacterium;species:Symbiobacterium thermophilum; 1895.0554 1859.6867 2510.8819 1691.5621 903.0031852 2275.5842 2067.0612 1809.2982 2542.159 2133.6182 1604.6513 1976.2635 533768 pectinase Carbon cycling Carbon degradation Pectin superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Glomerellaceae;genus:Glomerella; 967.8025978 1591.456 2020.3778 797.6891 698.5641 1725.492 1424.5679 1814.6362 1712.4053 1771.9815 1970.1251 86567242 pimF Organic Remediation Aromatics Aromatic carboxylic acid Frankia sp. CcI3 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 3749.2228 6912.008 10110.1476 4455.8048 4048.8278 3609.8796 3564.1553 10600.4256 5701.1409 4872.7706 9004.2532 6839.5472 91696108 nagG Organic Remediation Aromatics Aromatic carboxylic acid Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 6760.0723 3267.2549 3704.4283 4244.4794 5769.3298 4571.18 3178.8704 3523.9411 5801.7644 4402.4397 2269.5562 2363.0076 145576103 phn Organic Remediation Herbicides related compound Pseudomonas mendocina ymp superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas mendocina; 1268.2909 1755.3507 2378.9506 1041.4091 1338.4863 2043.1635 1781.7737 2110.3194 2049.6071 2213.7375 691.4520469 1862.4223 118168989 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 1704.9884 1232.4472 1181.8857 2021.2479 1055.5342 1320.3112 1313.7999 895.0504 1159.5118 1574.7262 1419.83 1700.2707 118702859 nagI Organic Remediation Aromatics Aromatic carboxylic acid Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 2214.5023 6108.694267 1545.8672 2948.5977 839.5093 1395.0029 1488.7094 1025.5708 1683.5392 1785.3068 1362.5314 1145.992 119173080 glnA Stress Nitrogen limitation Coccidioides immitis RS superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Coccidioides;species:Coccidioides immitis; 1667.163 811.7645 809.3259 1874.8898 1612.281 752.9837576 1605.4189 778.7042 758.5671 1105.3892 1006.702864 799.2749344 124260184 pstB Stress Phosphate limitation Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 6264.8235 6733.4083 6124.3948 5831.05 13775.0316 8094.8665 8535.6043 5853.5536 7862.8573 8346.5526 6779.8392 4864.5197 24216893 gyrB other category gyrB Leptospira interrogans serovar Lai str. 56601 superkingdom:Bacteria;phylum:Spirochaetes;class:Spirochaetes;order:Spirochaetales;family:Leptospiraceae;genus:Leptospira;species:Leptospira interrogans; 907.155426 1295.8032 1388.4627 757.4582911 1415.0892 1477.285 1612.4222 1236.919 1047.8708 1702.5778 167896555 PobA Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia pseudomallei 7894 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia pseudomallei; 1098.6948 2167.0499 1247.9677 1029.9169 2974.4667 2030.5554 1409.5075 2263.971 2289.8198 2340.2087 1274.5954 88698535 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Congregibacter litoralis KT71 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;genus:Congregibacter;species:Congregibacter litoralis; 1097.8754 2303.1277 1218.9614 933.3493 2316.95 674.8526816 2143.3153 1078.8054 878.2716 1039.4736 999.3032866 1029.1159 163777270 mer Metal Resistance Mercury Monosiga brevicollis MX1 superkingdom:Eukaryota;order:Choanoflagellida;family:Codonosigidae;genus:Monosiga;species:Monosiga brevicollis; 3712.8482 8394.8082 5865.3884 4827.6653 10296.9238 6434.8083 8182.3098 4079.2609 6381.6019 6203.3201 3530.1752 3373.9556 149909741 CadA Metal Resistance Cadmium Moritella sp. PE36 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Moritellaceae;genus:Moritella; 924.792134 524.1280885 919.7751 769.2452 636.5050402 432.8416416 1266.3609 87310114 sigma_70 Stress Sigma factors Blastopirellula marina DSM 3645 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Blastopirellula;species:Blastopirellula marina; 497.9353 329.8673497 522.3327227 414.4357652 450.2707068 352.893946 381.8277127 381.6691605 469.5486192 116098798 gyrB other category gyrB Lactobacillus brevis ATCC 367 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus brevis; 656.4229 1031.2805 1229.7933 606.4022135 822.0286 713.8636 652.8739 1548.9595 1105.9966 898.8657 1281.4003 1201.0587 119386067 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 1214.6961 2403.8448 3773.8882 1853.6313 2495.0559 1723.3233 2396.727 4018.9332 1966.62 3362.2738 1654.5024 3960.7801 15807741 CopA Metal Resistance Copper Deinococcus radiodurans R1 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus radiodurans; 8576.186 5907.8946 7467.5525 9749.5969 5476.8979 5718.7909 5910.6083 4442.6311 10555.2177 6361.5151 7062.1763 7522.1548 218751018 CODH Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 2535.467 1674.5884 1820.7652 2213.972 1447.6933 986.3522 1570.6871 1238.9812 1277.6204 1399.6363 1830.6267 1581.1014 152994544 proO Organic Remediation Aromatics Other aromatics Marinomonas sp. MWYL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Oceanospirillaceae;genus:Marinomonas; 2005.1868 1706.7124 1076.2273 1856.5899 3367.8202 1471.1902 2619.9606 1797.0608 1708.6543 1617.5161 1515.7843 1567.1219 217401848 ppk Phosphorus Phosphorus utilization Bifidobacterium angulatum DSM 20098 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium angulatum; 1284.9873 1910.0581 1347.694 1638.0185 1816.0012 1865.079 1391.6024 1316.2428 1192.6181 1533.6002 1379.1324 1417.9748 158333507 per_bac soil_benifit Acaryochloris marina MBIC11017 superkingdom:Bacteria;phylum:Cyanobacteria;genus:Acaryochloris;species:Acaryochloris marina; 913.4634 895.5723 1042.1176 519.0814 980.9853 921.0531 875.4192 808.6986 885.5288 664.2921 1028.5804 229326839 phoA Stress Phosphate limitation Bacillus coagulans 36D1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus coagulans; 790.934 480.5739261 731.2053 931.5002 1025.199 614.0454 707.4492 751.2921382 576.2379 930.1541 540.8512654 188579452 fnr Stress Oxygen stress Methylobacterium populi BJ001 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 2642.0388 1477.6649 1700.0003 2823.4708 1519.8722 1270.5965 1150.6359 1399.8228 1069.8966 1495.3663 2720.7863 1366.506 218266219 atzA Organic Remediation Herbicides related compound Clostridium hylemonae DSM 15053 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium hylemonae; 886.5098661 806.6361 860.1361 759.7764 595.2257 1014.9968 600.9667541 157285442 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1126.4593 670.8955 1353.4953 659.2482 915.5749 487.7395 605.3298 2202.7476 836.2072 742.2674 1010.5498 109290271 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1073.0391 1045.943 493.8978792 654.9385 908.4257 601.8158 683.8984 169759556 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 2177.3217 1059.3587 1620.98545 2106.79575 1203.6651 1585.8825 2219.684109 1684.15825 1326.08 1984.3395 1598.7893 1720.265 134094896 AceA Carbon cycling Carbon degradation Others Herminiimonas arsenicoxydans superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Herminiimonas; 6798.4752 12581.7824 7247.8899 8147.096 11806.501 9149.9279 9243.1453 6963.6001 9099.1123 7307.6819 9314.6991 5553.4167 71908098 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Dechloromonas aromatica RCB superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Dechloromonas;species:Dechloromonas aromatica; 1764.7084 732.2 1324.2563 1594.0632 1260.0697 1092.1081 933.4127 2556.4587 1266.8218 1377.6384 1492.985 1425.6238 27657369 nhh Organic Remediation Aromatics Nitoaromatics uncultured bacterium SP1 superkingdom:Bacteria; 531.0996 461.5492437 717.7708 530.6832 453.6956717 620.2526 979.0178 403.7975421 545.5927 424.8911715 83404790 nirS Nitrogen Denitrification uncultured organism 1617.4904 1534.9446 1177.3872 452.5290898 1378.3887 712.8085 460.4927486 597.8517 1123.773 3128310 ArsC Metal Resistance Arsenic Rhodobacter capsulatus superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter; 2406.208 2034.0814 1983.4766 2460.911 4850.788715 1887.1096 1528.1096 2169.3519 1312.3692 1742.2676 3786.0613 2460.6309 146400501 NDEDFP_EPS Bioleaching EPS Acidiphilium cryptum JF-5 1410.4181 1801.7846 1445.6901 776.3346 1857.4657 1467.9148 1239.2205 1312.2 1201.3315 1278.525 1524.408995 1112.2516 85089754 RgaE_fungi Fungi function carbon degradation Neurospora crassa OR74A superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Sordariaceae;genus:Neurospora;species:Neurospora crassa; 920.0721 1164.9244 743.711652 985.4958 1333.7844 1412.1877 918.467 804.6799 917.2023 1039.9984 1120.4114 1296.9654 33572392 tfdA Organic Remediation Aromatics Chlorinated aromatics Bordetella pertussis Tohama I superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella pertussis; 1615.986 1547.1246 2015.6234 1495.5643 1269.7391 1904.429 1331.9343 2064.9647 1772.3857 1766.0857 1211.2244 1800.5855 189220008 mauAB Organic Remediation Herbicides related compound Methylokorus infernorum V4 superkingdom:Bacteria;phylum:Verrucomicrobia;order:Methylacidiphilales;family:Methylacidiphilaceae;genus:Methylacidiphilum;species:Methylacidiphilum infernorum; 1487.8821 1927.5578 1964.2263 1646.4425 1321.9347 1778.5868 1374.6494 1545.7519 1884.1223 1947.6521 2513.6702 1813.7961 170692248 SMR_antibiotics Antibiotic resistance transporter Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 6686.6513 7529.6269 10600.6226 5567.1946 4571.4663 8891.0645 7051.1619 9207.1028 10952.6212 9184.9073 2143.1628 9783.1174 188583012 nhh Organic Remediation Aromatics Nitoaromatics Methylobacterium populi BJ001 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 2053.7042 2622.5708 2074.0722 2130.9102 1450.2907 2609.5282 2274.8788 1826.8131 2569.4874 2835.664 1955.4586 2804.585 39647387 alkK Organic Remediation Others Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 522.5328086 491.8766008 726.744017 581.8846 2113.9124 436.0174688 1293.7155 530.4455 628.297 342.6312616 541.038986 37519362 silC Metal Resistance Silver Pseudomonas fluorescens superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 490.6684 1097.2997 921.0764 877.3539 600.5991203 1098.33 1289.1504 989.6816 1265.191 1124.897 1267.8253 89241984 rubisco Carbon cycling Carbon fixation Lyngbya aestuarii PCC 7419 superkingdom:Bacteria;phylum:Cyanobacteria;order:Oscillatoriales;genus:Lyngbya;species:Lyngbya aestuarii; 2718.0254 2019.9626 2963.5252 2460.9932 3354.1504 2497.2663 2068.0476 2750.9864 1950.6493 2158.9325 2653.7577 2826.2684 237731555 narI Stress Oxygen limitation Citrobacter sp. 30_2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter; 12918.2164 4589.0147 7075.4953 10595.3505 6898.6545 5742.4219 12460.1427 4894.4473 6112.9424 6339.9862 6294.5903 7025.4009 219563140 bphA Organic Remediation Aromatics Polycyclic aromatics uncultured bacterium superkingdom:Bacteria; 2019.8347 1596.4192 2207.63185 2181.854916 856.1368 838.0756 1224.88455 1835.3224 1342.28365 1500.9718 1580.2183 1790.3549 260617705 pilin virulence pilin Vibrio furnissii CIP 102972 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio furnissii; 595.7795479 1125.4225 756.315 1163.544669 584.2930214 712.6223 626.3027295 692.4477 842.5533 56421223 pimF Organic Remediation Aromatics Aromatic carboxylic acid Geobacillus kaustophilus HTA426 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus;species:Geobacillus kaustophilus; 2204.5624 2323.4266 1985.7593 2344.9752 1956.9274 2378.7677 4228.2241 1670.2444 2608.0221 2342.7435 2155.9679 1721.5147 226184811 NirB Nitrogen Assimilatory N reduction Rhodococcus erythropolis PR4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus erythropolis; 1887.0631 906.1741 1264.31 1890.2447 1148.8151 809.6437 1093.5027 1216.7094 920.8135 1040.5903 2254.2285 1097.8326 167070431 nagG Organic Remediation Aromatics Aromatic carboxylic acid Rhizobium leguminosarum bv. trifolii WSM1325 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 2136.6352 2287.9513 2022.4861 2077.6954 2367.3255 1958.2567 1596.3962 1777.1035 1820.5668 4029.5026 1863.054 119395258 mcrA Carbon cycling Methane Methane production uncultured methanogenic archaeon superkingdom:Archaea;phylum:Euryarchaeota; 1394.3531 1039.8476 732.0263916 560.8866023 1134.4629 593.8994129 460.9936513 752.9202 254469170 type_III_secretion virulence secretion Pseudovibrio sp. JE062 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pseudovibrio; 9303.2763 4278.7079 5807.8702 8273.2639 6074.1991 5402.3907 6461.3398 6292.515 5177.9406 5677.1793 6025.9471 5731.5252 189336342 MFS_antibiotic Antibiotic resistance transporter Burkholderia multivorans ATCC 17616 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 11110.0546 9285.9333 10528.1433 12195.1621 18096.5544 9895.798 14067.6836 8602.1555 9880.6511 9905.6383 10920.8159 10242.0112 227881764 ahpC Stress Oxygen stress Halogeometricum borinquense DSM 11551 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halogeometricum;species:Halogeometricum borinquense; 1182.3175 726.0198 981.5607 1429.46 919.1686 971.6774 2078.0736 870.6066 818.9027 1653.1413 114327150 AceA Carbon cycling Carbon degradation Others Granulibacter bethesdensis CGDNIH1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Granulibacter;species:Granulibacter bethesdensis; 443.1340417 330.4535087 525.1452 537.9502 539.0429 433.446396 224522593 sigma_24 Stress Sigma factors Bacteroides cellulosilyticus DSM 14838 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides cellulosilyticus; 1032.0437 552.4004769 639.7566 486.3324 937.9444551 464.8247072 109290006 helicase_family_1_Dda_like Bacteria phage REPLICATION Aeromonas phage 25 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 1309.7027 3012.5949 2085.3839 1930.9127 5522.5335 1880.4989 3746.4058 1819.9258 1932.5818 1492.4406 1729.9156 1304.9439 189206602 ABC_multidrug_fungi Fungi function metal resistance Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 1080.3328 485.5180499 1312.5666 1086.7616 483.3388173 914.4295 1162.9301 803.4621 728.1753 685.4364 88949537 atzA Organic Remediation Herbicides related compound Halorhodospira halophila SL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Halorhodospira;species:Halorhodospira halophila; 6906.3768 5371.7389 6850.773 8078.9919 7683.1622 7565.0101 5076.0231 3795.6578 8329.9331 7350.1144 6614.2376 6401.5815 15888482 ppx Phosphorus Phosphorus utilization Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 3195.6778 1709.3246 1760.5718 2761.5854 2147.4139 1930.079 2604.8658 1396.1552 2299.8146 2006.9236 1980.7565 1944.7203 83943572 nhh Organic Remediation Aromatics Nitoaromatics Sulfitobacter sp. EE-36 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sulfitobacter; 2167.0594 2377.7736 1821.027 1552.6555 3255.6935 2740.7697 1721.0618 3079.2449 2464.1228 1544.6008 206580081 silC Metal Resistance Silver Klebsiella pneumoniae 342 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella pneumoniae; 945.083 1025.48265 1229.4589 873.76515 1443.7155 885.7826 1096.2477 993.45625 967.85205 900.7543725 1157.3623 148259937 NADH_quinone_oxidoreductase Bioleaching Electron transport Acidiphilium cryptum JF-5 577.3067 14432.96762 542.0628689 458.2218725 415.5059 413.1585412 537.8 67525743 ABC_multidrug_fungi Fungi function metal resistance Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 792.9622 624.2236 541.8663 877.3233 841.6222 493.2626 414.3311 83575143 TerD Metal Resistance Tellurium Rhodospirillum rubrum ATCC 11170 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum rubrum; 1752.8342 2476.3627 3036.7606 1928.5293 2085.1508 2437.3963 2469.2647 2549.5471 2790.8638 2980.2249 1625.4566 2662.0432 152957877 mauAB Organic Remediation Herbicides related compound Hyphomicrobium sulfonivorans superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Hyphomicrobiaceae;genus:Hyphomicrobium; 1379.5775 1649.1925 1662.5902 1756.009 1071.230851 2102.9588 1606.4513 1623.3161 3327.7633 1727.4051 1292.283298 1530.0033 82524125 cda Carbon cycling Carbon degradation Starch unidentified microorganism 866.4284659 1766.424 1637.3012 980.5373 981.5731 885.6366 798.5363951 1789.7701 1275.9779 881.3902 1042.2303 171059025 endoglucanase Carbon cycling Carbon degradation Cellulose Leptothrix cholodnii SP-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Leptothrix;species:Leptothrix cholodnii; 2927.0185 1342.70855 1608.038 2635.938 2264.5649 1768.3193 1882.70025 2038.2566 1430.204 1974.07195 1671.247357 1455.14835 256560398 proV Stress Osmotic stress Brachybacterium faecium DSM 4810 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Dermabacteraceae;genus:Brachybacterium;species:Brachybacterium faecium; 5684.4005 4703.7486 5732.4394 2402.9568 1836.9136 4474.2333 3699.5958 5856.2891 5266.9501 4237.4554 1833.7259 5445.3706 110820056 ZntA Metal Resistance Zinc Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 5511.5402 2753.4113 3626.1477 4800.2976 3629.9168 3566.1922 4519.3385 2195.945 3187.1024 3485.8641 3391.7935 5364.0064 98978005 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Sphingopyxis alaskensis RB2256 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingopyxis;species:Sphingopyxis alaskensis; 1472.3544 658.7646 987.2747 1000.2207 640.4519945 1069.225 1073.3992 1134.6908 847.4135 837.1822 687.2237171 1041.4476 149375431 pimF Organic Remediation Aromatics Aromatic carboxylic acid Marinobacter algicola DG893 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter algicola; 862.8639 833.1465 1375.2609 890.9555 1244.7314 885.9806 1093.95 1555.2538 1078.2838 899.96 840.0442053 1076.2865 262101513 serine_protease_inhibitor_Oomycetes soil_borne_pathogen oomycete virulence Phytophthora infestans T30-4 superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora;species:Phytophthora infestans; 1811.7617 1539.0076 2280.213 1124.9229 731.0987 1804.521 1419.2457 1853.0552 3552.3664 1683.3758 1480.348 1713.1654 35211898 sigma_70 Stress Sigma factors Gloeobacter violaceus PCC 7421 superkingdom:Bacteria;phylum:Cyanobacteria;class:Gloeobacteria;order:Gloeobacterales;genus:Gloeobacter;species:Gloeobacter violaceus; 2081.7106 759.571 1110.122423 2194.2065 1301.0792 1040.9875 1106.4067 577.1922 1372.6291 1296.3578 2704.4496 1312.1534 88786562 grpE Stress Heat shock Synechococcus sp. WH 7805 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 1082.5894 1707.2348 907.3075 837.316 748.6728348 1160.9519 1201.3114 1893.0235 1067.8347 1506.6555 876.3695 1186.1453 6460740 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Deinococcus radiodurans R1 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus radiodurans; 622.278 1602.0195 1046.2178 734.4476 1466.1978 905.4686 798.6261 1322.9728 956.2495 1120.7691 1038.4219 157283904 CopA Metal Resistance Copper Kineococcus radiotolerans SRS30216 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Kineosporiaceae;genus:Kineococcus;species:Kineococcus radiotolerans; 2485.6869 1215.0918 2097.6407 2348.5365 1596.6963 1951.8255 1616.2468 1958.435 1690.249 1820.0978 2278.157 1572.6698 214031703 pcbC soil_benifit Ruegeria sp. R11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 3770.2444 4538.1464 6035.7185 3547.6179 2439.1632 5529.893 4139.2266 5731.5667 7319.1432 4591.4877 1793.2204 5201.1545 161393077 nhh Organic Remediation Aromatics Nitoaromatics Roseobacter litoralis Och 149 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter litoralis; 2346.1119 997.2706 19044.40373 1924.5707 1255.7299 1247.7658 806.4351 855.3814 1358.4098 1024.360946 1571.118 156932744 CysJ Sulphur sulfite reductase Cronobacter sakazakii ATCC BAA-894 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Cronobacter;species:Cronobacter sakazakii; 1608.0743 2693.2537 1980.9758 1993.1405 5115.1879 1526.4537 2915.4681 1985.3912 2167.3312 1479.4094 1689.8666 1553.4307 48745 sigma_32 Stress Sigma factors Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 2117.9106 4041.6837 2555.8526 15761.46248 3130.4089 2188.1348 2721.6404 2031.2543 2512.7688 1683.4316 2900.8748 2083.4994 221156987 amyA Carbon cycling Carbon degradation Starch Thermomicrobium roseum DSM 5159 superkingdom:Bacteria;phylum:Chloroflexi;class:Thermomicrobia;order:Thermomicrobiales;family:Thermomicrobiaceae;genus:Thermomicrobium;species:Thermomicrobium roseum; 10398.801 3462.0121 6084.4258 10582.6392 6387.5244 3186.3175 5183.6253 3053.1212 3268.4236 4613.9323 15412.2636 3969.4864 159890009 hrcA Stress Heat shock Herpetosiphon aurantiacus ATCC 23779 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Herpetosiphonales;family:Herpetosiphonaceae;genus:Herpetosiphon;species:Herpetosiphon aurantiacus; 1330.2004 892.7498 913.0288 515.7384325 1084.239 876.51325 747.0674 1061.7989 819.73565 827.9029 1025.3327 189425847 hydrogenase Energy process Energy process Geobacter lovleyi SZ superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter lovleyi; 946.3859 683.6924598 862.9016793 912.6776 1141.4941 984.622 1124.0595 283812887 Tet Antibiotic resistance other Kribbella flavida DSM 17836 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Kribbella;species:Kribbella flavida; 1145.4392 16848.40144 1069.4809 1233.3251 1473.137 714.3422 947.7046 1145.6146 890.7253 1484.0478 1111.6473 171683183 RgaE_fungi Fungi function carbon degradation Podospora anserina S mat+ superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Lasiosphaeriaceae;genus:Podospora;species:Podospora anserina; 1215.4349 458.4145673 982.3167 952.9779 786.3467 878.0388 947.8881 836.0542 904.703 983.9317 826.5089 254489277 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 11614.59609 16852.32406 13436.04547 10214.40704 15077.11778 14667.56902 10363.05086 10465.27265 14564.97758 12092.25719 18606.1905 11439.43368 302901118 hmgB_fungi Fungi function carbon degradation Nectria haematococca mpVI 77-13-4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Nectria;species:Nectria haematococca; 856.5507 540.8415482 936.1984 688.6091309 652.2316 621.296 731.2349 212537097 phospholipase_D_fungi Fungi function carbon degradation Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 1354.4188 688.9517 651.3108 932.2809 535.9995214 1371.1395 767.774 420.3402 616.1759 1051.653 810.2498 145243572 nagG Organic Remediation Aromatics Aromatic carboxylic acid Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus niger; 499.1604766 1183.503 758.9175 468.9751527 1403.6313 753.9913 828.4487 913.57 843.0568 852.0448 915.7279 89079597 ppx Phosphorus Phosphorus utilization Lactobacillus reuteri JCM 1112 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus reuteri; 1727.0442 1987.8131 2035.9205 2066.6963 3280.4926 2272.4434 1595.7151 1779.4128 1296.2587 1708.9693 3144.3161 2739.1641 158251706 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria; 566.0537026 1005.222 967.3701 729.6112648 932.5694 810.1881 919.9247 982.017 1009.8379 802.7217424 85688952 pcbC soil_benifit Erythrobacter sp. NAP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 929.703 1729.2157 1328.3274 1069.4206 2410.9893 895.6573 1763.6737 1359.3945 1073.764 2305.615 980.7082452 1602.5239 117983618 bclA Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 1348.7773 1992.1711 1521.1064 1058.942 1170.3342 961.9884 1336.7403 3878.7415 1380.8067 1223.6865 2076.0621 1300.6319 178462689 pnbA Organic Remediation Aromatics Nitoaromatics Streptomyces griseus subsp. griseus NBRC 13350 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces griseus; 2758.0939 984.184 1500.882 2457.514 1023.301229 1064.8578 1266.8637 1550.8841 1713.0926 1875.1037 936.7192005 1194.014 49647840 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Yarrowia lipolytica CLIB122 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Dipodascaceae;genus:Yarrowia;species:Yarrowia lipolytica; 841.8558 1447.8856 1304.788 668.7258581 1651.7358 949.5448 795.575 1201.2764 1066.3203 1111.6424 1030.0635 165879987 exoglucanase Carbon cycling Carbon degradation Cellulose uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 596.0851 512.5438 459.1677396 793.6405 579.1891 515.6984 452.7882618 595.2678486 2353018 gyrB other category gyrB Shewanella gelidimarina superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella; 729.3469 1242.4883 1189.2718 633.6064 1031.2809 985.8317 1343.2111 1336.6456 1197.825 1398.4474 177839337 sigma_24 Stress Sigma factors Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 463.9139253 21949.39498 529.5455168 905.069771 959.9095 632.7666 579.02 961.3867 769.2344 1195.6481 146337218 CorC Metal Resistance Cobalt Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 10511.8875 13244.3571 11421.8128 10464.1283 10823.8472 11013.4664 14846.7071 7697.7484 12075.0544 10528.3205 11681.4829 7678.7585 83748064 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia solanacearum UW551 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 1947.307 1844.8926 991.084 1475.1138 3310.5435 1293.9732 2987.6043 1176.5353 1679.4039 942.3367 842.8550836 1228.386 41816642 sigma_70 Stress Sigma factors Treponema denticola ATCC 35405 superkingdom:Bacteria;phylum:Spirochaetes;class:Spirochaetes;order:Spirochaetales;family:Spirochaetaceae;genus:Treponema;species:Treponema denticola; 569.5966 537.1630463 611.8684 657.4586683 665.5548 443.9552 490.758 404.8283717 160366010 fnr Stress Oxygen stress Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 1761.9682 1188.4981 1200.8161 1504.5361 1093.1879 950.158 1281.2818 1096.3808 761.5725 986.9578 1094.3687 2475.352 222081954 ahpF Stress Oxygen stress Agrobacterium radiobacter K84 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 642.2787 1700.2137 984.0615 805.7706 1335.358 1826.5666 1760.072 979.0178 1343.0175 1673.3371 1500.8358 119774125 cytochrome Energy process Energy process Shewanella amazonensis SB2B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella amazonensis; 2957.0934 1144.5236 1344.3208 2243.1615 2508.0938 1570.2457 1754.8072 1480.8609 1883.0506 1621.201 2260.547 1097.2696 119775970 sir Sulphur sulfite reductase Shewanella amazonensis SB2B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella amazonensis; 1246.0941 652.3424 825.1885 1114.4991 910.7971 794.9192 976.68985 1768.6884 912.8107 1132.0323 1142.5861 1121.8917 237786505 AceA Carbon cycling Carbon degradation Others Corynebacterium kroppenstedtii DSM 44385 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium kroppenstedtii; 1420.8818 3386.4105 1541.3745 1252.4332 3171.8924 2261.1215 2232.3931 2530.4466 2409.5126 2680.8747 1922.8996 23123608 cadBD Metal Resistance Cadmium Nostoc punctiforme PCC 73102 superkingdom:Bacteria;phylum:Cyanobacteria;order:Nostocales;family:Nostocaceae;genus:Nostoc;species:Nostoc punctiforme; 560.6775 526.3707838 653.4678 630.9153648 512.6517 197118748 silC Metal Resistance Silver Geobacter bemidjiensis Bem superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter bemidjiensis; 667.5717 951.3337 693.0682 870.0942 1197.5411 860.3605 746.7921 628.5507 1153.0467 1027.425 1040.8159 150376517 sigma_24 Stress Sigma factors Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 1021.6068 610.8144 838.7684 1099.7743 561.4477476 542.659 466.5515 774.2377 662.1721 509.3092 595.2973 63003135 cbdA Organic Remediation Aromatics Chlorinated aromatics uncultured soil bacterium superkingdom:Bacteria; 3476.37925 2103.72575 2253.2495 3133.754 3159.6161 2714.3494 1887.41445 2367.5836 2400.04785 2599.21445 2620.14725 3020.93815 120592852 ureC Nitrogen Ammonification Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 8504.7933 7198.1166 11303.3887 9733.9817 6558.9376 9354.2756 5858.0861 6684.3424 5492.2988 7536.2815 7086.3451 7436.3414 240169394 narI Stress Oxygen limitation Mycobacterium kansasii ATCC 12478 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium kansasii; 3696.4406 2819.176319 3463.967 3716.9056 3076.61535 2998.743681 2740.4496 2719.487986 3135.9577 3633.5459 4395.745243 3592.05965 85775236 TerC Metal Resistance Tellurium Anaeromyxobacter dehalogenans 2CP-C superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter;species:Anaeromyxobacter dehalogenans; 1073.9928 1506.2616 993.6732 1522.8642 1215.7409 1235.780427 1974.8791 1542.3882 2683.4932 163669292 ChnA Organic Remediation Other Hydrocarbons Chloroflexus aurantiacus J-10-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aurantiacus; 781.5716 1256.8683 821.9898 1576.3527 602.3047 900.6308 831.7693 745.60765 731.96635 655.0857582 91787387 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 3292.4575 2673.7704 2934.2717 3861.3734 1992.1732 3335.327 3547.7873 2792.2741 2395.2543 3631.6979 2646.3101 2149.8129 189191118 CopA Metal Resistance Copper Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 769.59675 594.4402 1042.8301 481.2344191 683.7566 470.3149733 1598.2118 593.4279 666.7582153 189425041 mer Metal Resistance Mercury Geobacter lovleyi SZ superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter lovleyi; 865.6444 2443.4359 1749.8562 1257.5424 789.5888 1603.736053 1340.45665 1398.2977 2794.3236 1320.309534 1657.11 11876710 xylanase_fungi Fungi function carbon degradation Coniothyrium minitans superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;genus:Coniothyrium; 2571.5865 6540.7409 7279.4988 3489.6088 2967.0156 5783.4769 6524.4949 5953.0386 7325.3521 7617.9082 2850.4712 7480.0103 108757418 sigma_32 Stress Sigma factors Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 2890.1468 4680.9522 3797.0594 3513.6754 1719.3455 4045.7656 6211.5565 3444.7791 3521.8695 3266.2423 2816.7646 1614.6907 118020560 atzC Organic Remediation Herbicides related compound Shewanella woodyi ATCC 51908 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella woodyi; 481.4969038 1364.9188 945.0841839 1203.0773 928.0078 891.1564 735.2925 1579.1705 1217.7709 39982969 phoB Stress Phosphate limitation Geobacter sulfurreducens PCA superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter sulfurreducens; 724.7396 665.0594 858.5746 1338.8164 403.1568525 547.7923934 760.8682 89086298 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bacillus sp. NRRL B-14911 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 791.7399 1049.3494 1002.0468 569.1997918 826.4067951 1216.021 1266.1755 913.4247 1154.0718 751.4574 189420625 Arylest Organic Remediation Aromatics Other aromatics Geobacter lovleyi SZ superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter lovleyi; 7298.479 6031.1279 5979.2762 8033.4203 3972.8948 6649.5058 4550.8587 4630.5863 5446.3903 5249.7053 6784.2357 4809.0273 99083005 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 1115.81958 1236.335991 1174.525478 1051.83635 1244.573433 1070.310036 1316.919764 1436.462438 1173.082811 1074.495664 1290.2143 1200.287938 183175388 clpC Stress Protein stress Mycobacterium marinum M superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium marinum; 2126.1849 1540.1672 1938.4333 1867.0822 1843.8338 1533.3485 1552.3233 3545.9587 1964.2786 1913.963 2870.7479 2057.3118 55229277 CopA Metal Resistance Copper Haloarcula marismortui ATCC 43049 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloarcula;species:Haloarcula marismortui; 5300.0263 5411.9416 6565.8572 4690.827 6891.5826 5895.32 5298.8322 6437.2942 5139.2428 6067.9157 7887.5976 6684.9439 158424125 pimF Organic Remediation Aromatics Aromatic carboxylic acid Azorhizobium caulinodans ORS 571 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Azorhizobium;species:Azorhizobium caulinodans; 5522.203715 7152.522395 5677.338684 6005.636523 5534.762248 6709.005115 5799.494162 6205.4853 6072.397926 6800.120598 5034.571401 6838.933824 148251640 MATE_antibiotic Antibiotic resistance transporter Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2475.5455 1696.5693 2174.3364 1853.6586 1610.1386 1776.5079 1798.8414 3548.1012 1912.4175 1935.8715 1369.7387 1729.2048 90408445 gyrB other category gyrB Psychromonas sp. CNPT3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Psychromonadaceae;genus:Psychromonas; 1609.7668 657.9634797 948.4252 1332.8924 1121.5892 766.0611 843.7844 1323.7353 837.7449 1027.3022 2079.2333 944.3599 56476184 nagL Organic Remediation Aromatics Aromatic carboxylic acid Azoarcus sp. EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 3087.4001 1015.2631 2097.7424 2735.0122 1384.7286 1677.1981 1346.7882 3061.0737 1905.1602 2165.9674 2227.0327 2032.9231 39976397 pec_CDeg Fungi function carbon degradation Magnaporthe oryzae 70-15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe;species:Magnaporthe oryzae; 1587.805 4481.7606 2195.724 2668.2368 2228.3332 3851.962 3152.3091 2198.1964 3219.6262 3905.5439 896.2377475 3690.1704 148292159 vdh Carbon cycling Carbon degradation Others Pseudomonas putida superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 2011.5537 3338.8426 3824.6989 1067.8864 1569.2239 3656.4235 2820.2193 3447.9868 4348.6295 3089.4886 860.1287719 3260.9659 217402269 amyA Carbon cycling Carbon degradation Starch Bifidobacterium angulatum DSM 20098 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium angulatum; 3906.6628 3067.408285 3479.557417 3189.744679 3567.2935 3328.647064 3081.169278 3265.538946 4391.35069 2990.69835 2596.6032 3205.293322 149143139 phn Organic Remediation Herbicides related compound Roseovarius sp. TM1035 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 5203.4973 2401.0032 3811.8751 5294.5043 3360.2933 3546.8238 3421.4427 3289.6508 3459.3846 4097.9642 2853.7625 3764.1741 149142735 ohbAB Organic Remediation Aromatics Aromatic carboxylic acid Roseovarius sp. TM1035 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 1885.2767 2416.1286 2872.0137 1450.787 1483.4889 2019.0839 1692.1109 2661.2211 2011.6665 1596.8805 1871.0601 2760.9024 269469112 sox Sulphur Sulphur oxidation uncultured SUP05 cluster bacterium superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales; 1301.4016 779.6787 1032.856 1085.9809 1361.9582 879.3849 889.1376 1030.9088 546.2419 651.9085 1807.2748 1046.1578 46199672 phenol_oxidase Carbon cycling Carbon degradation Lignin Thermus thermophilus HB27 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Thermus;species:Thermus thermophilus; 2710.7719 2090.8367 3485.4782 2798.1989 738.417 805.3662 1384.8006 2547.5741 2410.3513 1731.023 1575.1731 1831.8678 156033344 glx Carbon cycling Carbon degradation Lignin Sclerotinia sclerotiorum 1980 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Sclerotinia;species:Sclerotinia sclerotiorum; 1368.9929 3185.9319 1605.8571 2458.4866 1298.517367 2518.4744 3015.8325 2116.0084 2641.839 2377.2366 2122.3575 1030.9973 163757433 phzF soil_benifit Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 791.5384 748.9692 842.9594 738.8257 888.4838 817.7087 754.7515 675.2594657 146402839 cytochrome_c Bioleaching Electron transport Acidiphilium cryptum JF-5 2675.2032 3865.4541 3448.0099 2996.224 4173.354 3473.6128 3068.1712 2670.723 2838.5196 3428.5802 3700.1974 3302.9045 68229335 TerZ Metal Resistance Tellurium Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 3271.8524 1562.4412 2163.7808 3455.9266 2591.4462 2842.5472 2071.1675 2217.0065 3358.0855 3175.9616 3181.0016 2619.0198 15891048 amyA Carbon cycling Carbon degradation Starch Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 3133.8624 1928.4583 2482.4427 3146.4721 1587.5009 1628.665 1765.3369 2314.1311 1493.813 2056.4692 2128.6039 1735.1509 116225158 sigma_24 Stress Sigma factors Candidatus Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 849.5122 1046.4569 992.378 988.7558 1041.9597 1147.7798 899.6864 880.8576 742.3344 2596.8008 50542660 rubisco Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 1206.7845 2001.4477 2545.704 1244.201 829.5161535 2103.4822 1717.1275 2291.2177 2004.8402 1971.0458 1389.8233 2367.8963 18034235 APS_AprA Sulphur adenylylsulfate reductase Desulfococcus biacutus superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfococcus; 995.4004 917.1709 765.2858 953.3477 528.0790232 824.27095 1066.0372 683.08645 793.7294 836.7802 986.477 84516351 nagG Organic Remediation Aromatics Aromatic carboxylic acid Loktanella vestfoldensis SKA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Loktanella;species:Loktanella vestfoldensis; 2741.2632 1956.4665 1849.0445 2553.3145 2703.3264 2034.0402 1668.6658 1515.9754 1895.0373 1933.9844 3681.3861 2428.7032 225093364 nplT Carbon cycling Carbon degradation Starch Clostridium sp. M62/1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium; 688.1769 1654.5826 1281.8156 1070.4342 1189.9763 1449.5485 1515.7562 958.5494 1259.949 1450.7451 1016.8894 1394.9732 121302140 mer Metal Resistance Mercury Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 612.4053 1305.6404 590.1868 711.6275 910.4748 551.5389908 708.0686 1823.1092 588.6557 910.021 1013.2825 115436746 nagG Organic Remediation Aromatics Aromatic carboxylic acid Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 755.2981 740.5463 662.5498 947.1291 850.0556 819.1004 496.6746 704.4578 585.2448 695.7563 27378054 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 1185.8435 775.2333595 1010.232036 1021.9332 1360.3461 1030.176118 669.8002213 780.099158 613.1473064 124266467 pstA Stress Phosphate limitation Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 2186.3482 3742.3186 3672.7516 2054.5192 3879.4433 2821.3541 2683.2992 1943.922 3056.0169 3177.5026 2365.595089 84623125 pilin virulence pilin Xanthomonas oryzae pv. oryzae MAFF 311018 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas oryzae; 775.5674 694.7878 495.8562331 842.0279 790.9184 785.3321 326.284573 616.4035 614.2217 637.332 119959257 katE Stress Oxygen stress Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 1713.0074 1543.9007 2060.4196 2434.3378 1823.1679 2108.8216 3392.9622 1230.6535 1780.039 1336.3002 1019.5561 1320.4752 157913764 hrcA Stress Heat shock Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 687.6396 1108.322 955.0843 750.1586 803.162445 1107.2439 836.18535 741.2051 871.29385 959.15895 818.494138 1018.9952 94309957 chnB Organic Remediation Other Hydrocarbons Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 2400.3247 1246.8973 1811.4745 2589.5856 1908.7702 1419.0227 1729.7103 1354.4439 1632.3655 1839.1254 2236.9789 2657.7038 209539130 ara Carbon cycling Carbon degradation Hemicellulose Rhizobium leguminosarum bv. trifolii WSM2304 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 4784.464115 4156.937701 5117.312222 5578.363422 3007.858714 5227.3871 3241.6584 4163.88185 5292.731085 4952.71568 4040.817797 5513.773499 255934032 glnA Stress Nitrogen limitation Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 2043.3748 3321.6529 3001.008 2454.3225 2986.7146 3458.2826 2736.0163 2598.3516 2971.201 2658.2626 3309.9657 3192.3179 159045346 sox Sulphur Sulphur oxidation Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 3654.781254 3655.871 4045.697752 3559.10325 4440.7119 3778.4145 3093.46305 4965.387641 3683.5218 3752.13365 5378.423506 4358.159048 94417716 ppx Phosphorus Phosphorus utilization Pseudomonas aeruginosa PA7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 1093.2547 680.0065 1237.8046 1590.5292 807.2058 854.0387 816.3848 682.651 923.4319 835.8639247 979.9816 197722496 TerD Metal Resistance Tellurium Streptomyces pristinaespiralis ATCC 25486 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces pristinaespiralis; 23326.0842 28573.1754 30819.5802 22822.5146 33174.2957 31393.6072 26243.1315 30212.8452 27971.2745 30532.3337 27040.9405 33994.5799 73537611 cbdA Organic Remediation Aromatics Chlorinated aromatics Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 553.3301 455.8725174 462.3661069 725.1264 479.4352547 984.1799 931.339 426.2275031 588.444 123964716 pabA soil_benifit Prochlorococcus marinus str. MIT 9303 superkingdom:Bacteria;phylum:Cyanobacteria;order:Prochlorales;family:Prochlorococcaceae;genus:Prochlorococcus;species:Prochlorococcus marinus; 2576.6101 2539.4384 2571.8169 2579.9014 4182.9855 2187.9105 2579.3445 1515.8907 2801.2896 2928.6917 2712.4979 2311.1543 73294270 aclB Carbon cycling Carbon fixation Sulfurimonas autotrophica superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Helicobacteraceae;genus:Sulfurimonas; 516.5524 801.9527 754.3667 651.6734 748.4845 896.5397 793.0286 756.2992 731.0523 606.4499 724.1014799 700.1301 62084080 gyrB other category gyrB Streptococcus equi subsp. equi superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Streptococcaceae;genus:Streptococcus;species:Streptococcus equi; 4856.3128 4841.9671 4306.6829 3438.5856 2936.8321 1895.7992 2969.057 8332.0365 2769.3832 4425.9898 3763.6704 4392.2368 83017302 gyrB other category gyrB Microbulbifer hydrolyticus superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Microbulbifer; 2294.0752 1535.6053 2139.1945 2579.2439 1957.2687 2161.1387 1873.9714 2034.8735 1403.9182 1720.7722 20471.07438 2753.995 209869190 AprA Sulphur adenylylsulfate reductase uncultured marine bacterium superkingdom:Bacteria; 745.3985 1362.4977 1177.9019 770.6091 1772.9631 1054.7473 1329.1126 961.4908 1164.5092 739.5316 1168.3885 837.8792 120587490 MFS_antibiotic Antibiotic resistance transporter Acidovorax avenae subsp. citrulli AAC00-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax citrulli; 1696.0827 1029.5985 1238.2407 1319.9894 1174.2778 866.4626 916.2418 884.1808 1284.237 1309.1992 1156.112 1641.7709 162954045 pheA Organic Remediation Aromatics Other aromatics Renibacterium salmoninarum ATCC 33209 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Renibacterium;species:Renibacterium salmoninarum; 3078.84804 5180.9446 6648.994 5118.1624 4834.0559 3159.2833 2791.654241 7378.7887 3085.735919 6798.9273 4596.6274 4847.5557 61660056 xylF Organic Remediation Aromatics BTEX and related aromatics Pseudomonas putida superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 917.7132725 1220.8132 1016.6154 1078.7223 1179.0476 848.57 1127.3841 1394.0419 1072.0982 85703886 aoxB Metal Resistance Arsenic Roseovarius sp. 217 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 918.843 1846.63835 1685.41715 1393.05885 1661.2503 1366.556 1335.14595 1543.0103 1306.32335 1532.8632 2086.4888 1857.8838 81251657 nirS Nitrogen Denitrification uncultured organism 3712.5392 6795.4518 4334.1043 4297.7765 2771.3532 5174.3073 5089.2941 3315.2755 3923.1288 4023.8859 4575.1974 3284.6267 212702496 atzA Organic Remediation Herbicides related compound Desulfovibrio piger ATCC 29098 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio piger; 2658.4665 1667.032 1900.4998 3135.6648 1142.1793 1884.7465 1687.0755 1382.0658 1675.6063 1942.0131 1399.4572 1358.8434 56677321 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Silicibacter pomeroyi DSS-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria pomeroyi; 5639.1202 5333.0142 6108.983 5117.3679 7743.1312 5202.2307 6380.1191 4113.6975 7644.3466 4443.4876 6505.3341 4513.2599 270291407 obgE Stress Radiation stress Pediococcus acidilactici 7_4 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Pediococcus;species:Pediococcus acidilactici; 2190.5525 1954.2747 2592.7101 1929.0909 2656.2878 2191.7842 1184.2895 1892.1883 1727.4324 1717.9248 3092.3749 2142.8781 91787641 pstB Stress Phosphate limitation Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 4212.950152 4391.0782 4314.9704 4609.059529 4820.406113 7720.050253 4455.69595 4659.2916 4400.7177 4607.8968 5532.661445 5936.25395 91689859 CopA Metal Resistance Copper Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 2334.5736 1511.866 1722.3184 2293.3081 1843.6063 1866.9635 1735.1587 2371.5417 1925.8953 2033.8013 1727.8975 1401.4823 118472448 ureC Nitrogen Ammonification Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 6255.7432 4805.9312 4761.4344 6646.1076 2114.8793 5897.9972 4183.5247 3732.1346 3999.1264 4682.9968 3384.1537 3411.3351 301094546 necrosis_Oomycetes soil_borne_pathogen oomycete virulence Phytophthora infestans T30-4 superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora;species:Phytophthora infestans; 1456.7729 1766.3603 1832.2805 1364.8899 1577.9832 2025.0814 1452.842 1385.2493 1899.5804 1578.4335 1921.9443 1865.5395 110623052 arsB Metal Resistance Arsenic Tsukamurella strandjordii superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Tsukamurellaceae;genus:Tsukamurella; 1112.6509 1321.5431 1453.018 737.1186 1189.2748 2083.725 1361.0457 1875.7023 1684.0052 1494.3278 702.4312896 1664.1684 146401832 cat_bac soil_benifit Acidiphilium cryptum JF-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Acidiphilium;species:Acidiphilium cryptum; 1843.555933 1728.5977 1629.033033 1898.655 2514.8876 1449.4288 1338.193233 1195.812033 1289.836233 1537.3856 2072.7761 2208.5736 72118434 bclA Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 1064.6439 1425.9047 1358.1043 823.8924 711.6259669 1536.0257 1516.3641 1257.9849 1367.4104 1800.5118 1284.3313 1514.3073 226484293 sigma_70 Stress Sigma factors Enterovibrio nigricans superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Enterovibrio; 1324.2499 530.2063025 852.7531 744.5017443 477.3233007 476.170802 220710211 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 3210.3191 2712.4823 3213.0809 3804.6245 2778.0649 3298.1456 4043.0144 2794.2592 3285.7805 2985.3503 2966.5821 2645.1936 222109011 nmoA Organic Remediation Aromatics Nitoaromatics Agrobacterium radiobacter K84 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 1126.6071 470.8131045 726.2037 1010.8568 705.5791 856.083 794.9728 960.8372 489.1315743 734.2108 744.3482 194341331 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Streptomyces sp. Mg1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 4679.0602 3012.8115 5530.8058 4624.5036 1046.5095 3481.1508 2338.9974 3132.0289 3043.6108 2489.8614 3099.0057 2075.1089 68511363 ArsC Metal Resistance Arsenic Rubrobacter xylanophilus DSM 9941 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Rubrobacterales;family:Rubrobacteraceae;genus:Rubrobacter;species:Rubrobacter xylanophilus; 4869.651 21337.93761 7450.5849 5617.4919 9863.5278 6551.4523 6935.5305 4896.5293 6901.657 6075.3302 7396.791 4253.9795 218680769 nmoA Organic Remediation Aromatics Nitoaromatics Rhizobium etli CIAT 894 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 868.2771 804.8529 866.7264 587.2546173 1045.6771 190688660 amyA Carbon cycling Carbon degradation Starch Cellvibrio japonicus Ueda107 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Cellvibrio;species:Cellvibrio japonicus; 560.2106196 1924.4444 686.4527 912.3373 776.751858 1032.5372 1928.3747 623.8818616 987.3289 802.1866 911.1963 83316792 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 1195.5551 505.8042484 677.4237 1031.3825 539.7959958 506.0722084 627.6279 804.1727 791.2769 955.5065 868.2827 70731297 pimF Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 3710.1617 4377.552 4421.1813 2412.0246 1870.7184 4331.8196 3447.136 4903.9976 4034.8654 4291.6797 1723.453 4647.8782 209547726 dehH Organic Remediation Chlorinated solvents Rhizobium leguminosarum bv. trifolii WSM2304 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1520.1465 1282.5254 1913.3672 607.3884338 1749.4819 1352.271 2046.893 1355.7848 1357.6728 1432.229 33320459 dsrA Sulphur sulfite reductase Desulfohalobium retbaense superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfohalobiaceae;genus:Desulfohalobium; 629.5216731 1368.2064 1061.7023 696.7794 1695.191 800.7746 1032.3549 885.9238 959.8957 1073.3303 1091.197386 967.5675 15074513 MATE_antibiotic Antibiotic resistance transporter Sinorhizobium meliloti 1021 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium meliloti; 1056.1144 1647.0262 808.4972 934.6232 687.9847 1357.2383 1172.1884 834.0328 888.9187 918.8871 610.705 67084226 nmoA Organic Remediation Aromatics Nitoaromatics Azotobacter vinelandii AvOP superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Azotobacter;species:Azotobacter vinelandii; 10929.8066 6482.5201 10524.8137 8548.2144 7147.8966 10799.2475 7212.9035 9514.0793 9066.0876 8700.9087 9390.0883 8760.2359 63258945 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas syringae pv. syringae B728a superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae; 2549.947 4321.8925 3137.0539 3301.4459 2675.1905 5102.0235 4028.3898 3191.7877 4742.9809 4722.0459 2782.938 4809.4804 118424407 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 750.1804 851.7761 1295.0999 454.1955456 1164.5265 15347.96942 1339.4467 1103.0727 1157.4137 1175.5302 283820246 sigma_24 Stress Sigma factors Spirosoma linguale DSM 74 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Spirosoma;species:Spirosoma linguale; 483.1356536 1059.2249 1440.1942 938.0613 746.6265 674.8277 647.3223 2027.0057 912.2981 1010.854 1738.3482 1339.2061 94500890 ahpF Stress Oxygen stress Oceanobacter sp. RED65 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Oceanospirillaceae;genus:Bermanella; 631.0359 1947.2918 816.8428 921.4873 922.2297 956.5223894 1589.7736 686.0581 1108.3846 690.3769 562.477 269795995 sigma_24 Stress Sigma factors Sanguibacter keddieii DSM 10542 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Sanguibacteraceae;genus:Sanguibacter;species:Sanguibacter keddieii; 758.6964 915.0556 997.3651 702.683 840.6658 1298.6096 1063.8866 934.8614 1412.0025 1058.9702 1290.7034 242215305 cellobiase_fungi Fungi function carbon degradation Postia placenta Mad-698-R superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Postia;species:Postia placenta; 536.9054495 449.940747 356.4075722 724.7497 696.3458 643.5486 634.3728 372.0892306 475.1548 539.8324 187487080 pulA Carbon cycling Carbon degradation Starch Chloroflexus sp. Y-400-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus; 1081.3402 1514.0959 1476.5284 1155.9752 1500.2491 1086.7388 1112.635 1723.9631 1170.9744 1277.3302 1223.236594 1473.4947 26278708 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3003.2646 3116.5232 3777.8963 3087.9974 5212.0332 3293.1802 2620.1097 4598.0137 2862.5397 3119.8725 4609.0001 4029.2221 114228270 exaA Organic Remediation Chlorinated solvents Alkalilimnicola ehrlichei MLHE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Alkalilimnicola;species:Alkalilimnicola ehrlichii; 1626.5437 1488.1775 1619.8877 1911.969 2023.9873 1318.4416 1163.6775 1018.8892 1268.7556 1678.3285 2517.2259 1508.6495 302664092 Cyanide_hydratase_Fungi soil_borne_pathogen fungi virulence Trichophyton verrucosum HKI 0517 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Trichophyton;species:Trichophyton verrucosum; 768.2065 673.1 624.2383 588.2713649 501.8454 595.8431 600.1408 985.8865 78223968 CopA Metal Resistance Copper Geobacter metallireducens GS-15 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter metallireducens; 621.0288 623.0456 435.5986958 367.8741025 383.8528112 559.4635 529.6135 727.6330963 512.711 19112621 ZntA Metal Resistance Zinc Schizosaccharomyces pombe 972h- superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Schizosaccharomycetes;order:Schizosaccharomycetales;family:Schizosaccharomycetaceae;genus:Schizosaccharomyces;species:Schizosaccharomyces pombe; 627.4495 116610556 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 1550.302 688.0088 907.133 1591.1593 993.9157 1055.6298 1006.8336 1183.6768 897.7136 1211.9394 1077.5996 972.5524 224367449 gdh Nitrogen Ammonification Desulfobacterium autotrophicum HRM2 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfobacterium;species:Desulfobacterium autotrophicum; 987.8111 604.5586432 1026.2757 636.9522 559.6736 149118731 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 1852.3138 2126.6178 1101.2061 2127.0475 937.5301 1784.9881 1384.1353 1193.1908 1365.7562 1397.269 1689.8891 125999749 iro virulence Iron oxidation Shewanella baltica OS155 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella baltica; 1680.9714 1089.412 1459.27 1711.7112 1141.2545 1236.3873 690.7666 1338.8239 1839.7284 2132.4478 1252.7335 261251823 iuc virulence aerobactin Vibrio orientalis CIP 102891 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio orientalis; 1850.9303 1367.977 1879.4611 1795.8688 1430.2884 1748.3153 1084.2118 1582.0889 1196.5554 1419.8922 1718.6446 115401686 cutinase_fungi Fungi function carbon degradation Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 3256.1635 7719.5037 3832.1141 3373.3716 7528.661 4778.2797 6443.171 4133.8027 5326.15 3750.3526 4367.6008 3401.9147 220720963 nahA Organic Remediation Aromatics Polycyclic aromatics Variovorax paradoxus S110 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Variovorax;species:Variovorax paradoxus; 1234.2132 621.0099774 1278.8694 579.7612994 488.5068019 514.301277 523.1754907 649.4072 879.6805 87281294 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2035.8258 1449.9117 1480.1271 2320.1921 3237.4603 1232.391212 880.407352 86750253 nosZ Nitrogen Denitrification Rhodopseudomonas palustris HaA2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 3167.4163 1660.8009 2602.1899 3008.7572 1376.9552 1370.4895 1473.9701 1515.2491 1615.6376 2391.485 2114.3333 3095.9031 111620725 INF1_elicitin_Oomycetes soil_borne_pathogen oomycete elicitor Phytophthora mirabilis superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 668.2568 2574.5823 2019.6799 993.1253 3830.8121 1969.8777 1795.8477 2107.3175 2045.8444 2414.4879 1473.838 47018870 pstB Stress Phosphate limitation Listeria monocytogenes str. 4b H7858 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Listeriaceae;genus:Listeria;species:Listeria monocytogenes; 1072.4883 632.4910483 693.244933 821.5763088 3905.543759 879.9682 774.5615 733.8941 644.6521 838.913 31295.4065 873.7481 84502846 pcaG Organic Remediation Aromatics Other aromatics Oceanicola batsensis HTCC2597 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola batsensis; 4798.9837 3922.23495 3531.5102 5243.85765 2406.932 4573.6777 4838.2854 3109.35765 3882.3167 4168.85435 3822.7829 3936.45325 117648891 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Acidothermus cellulolyticus 11B superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Acidothermaceae;genus:Acidothermus;species:Acidothermus cellulolyticus; 4337.7724 1272.0638 2374.3707 3503.9227 2282.1214 1350.5678 1977.5705 2395.8834 1572.2802 2274.7509 3581.1314 1965.9505 259503573 glnA Stress Nitrogen limitation Lactobacillus antri DSM 16041 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus antri; 2442.0051 2058.7127 2995.323 842.5485 1223.4209 2324.5661 1876.1393 2903.3913 2013.0643 1759.5645 1170.094176 2045.9414 255107749 ahpC Stress Oxygen stress Sideroxydans lithotrophicus ES-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Gallionellales;family:Gallionellaceae;genus:Sideroxydans;species:Sideroxydans lithotrophicus; 2220.1035 1642.0184 1561.5698 1860.8498 509.9347793 2538.2017 3065.5101 1088.8519 2401.6729 2159.1224 1633.0003 1372.2736 196232822 sigma_70 Stress Sigma factors Chthoniobacter flavus Ellin428 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Spartobacteria;genus:Chthoniobacter;species:Chthoniobacter flavus; 831.2846 625.7359 804.2776 1377.1069 837.7914 868.583 717.7842 601.827 166364577 pstA Stress Phosphate limitation Microcystis aeruginosa NIES-843 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Microcystis;species:Microcystis aeruginosa; 729.9648 8518.355697 501.4830324 889.5995 565.2775671 662.6234 933.0113 2136.7793 394.6222391 545.5587 86750207 CODH Carbon cycling Carbon fixation Rhodopseudomonas palustris HaA2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 4786.0887 2513.0485 2327.2628 4856.2109 2511.418 2461.6554 2593.7626 2157.514 2538.7459 2398.7097 5821.0173 3034.9177 186660267 pmoA Carbon cycling Methane Methane oxidation uncultured bacterium superkingdom:Bacteria; 867.4175 487.425691 473.4976519 652.8624 560.2584 521.0042 590.9559056 256741019 rubisco Carbon cycling Carbon fixation Thiomonas intermedia K12 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Thiomonas;species:Thiomonas intermedia; 1515.6467 1536.7267 1367.2205 1122.9094 1825.0955 1401.3294 1448.4259 1376.9457 1363.974 1152.9694 1974.5101 2035.4911 148501158 phtA Organic Remediation Aromatics Aromatic carboxylic acid Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 2277.1371 3330.3688 3912.3429 2538.2198 3404.0519 3056.8708 2884.0396 4644.3004 2646.8597 3681.8352 2619.8109 3408.2728 229499053 AceA Carbon cycling Carbon degradation Others Geobacillus sp. Y412MC52 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 1333.7197 758.679 977.9113 1506.5908 1290.4584 1434.5125 1414.3116 978.6388 1644.7957 921.9487 170702153 iro virulence Iron oxidation Burkholderia ambifaria IOP40-10 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ambifaria; 1430.177 2274.9411 2049.3987 1800.6629 2106.5561 1873.4097 1847.8307 1436.644 2054.0336 2165.4202 1601.0236 2092.9884 161339355 catechol_B Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 3063.5578 2048.9647 3375.0217 2805.3353 1546.1122 2115.208 1472.7887 2430.5742 1821.9286 1691.7841 2357.1259 1620.3622 163854761 cydA Stress Oxygen limitation Bordetella petrii DSM 12804 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella petrii; 3688.5491 2771.0088 3992.7608 4298.5025 1684.9908 4738.9746 4390.2526 4729.4177 3596.5509 5162.138 3310.1099 3126.9931 114541783 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 59117.403 66342.9247 65542.4114 54427.4165 85347.4681 75502.6515 58023.997 42975.8646 74653.5365 64295.2329 62776.0967 52172.7076 126718811 nhh Organic Remediation Aromatics Nitoaromatics Roseobacter sp. SK209-2-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 1018.3831 978.0166 1555.4923 1885.3958 1616.5055 2664.4077 1235.9915 1060.0998 1088.3827 1090.1885 873.8443 218988984 phenol_oxidase Carbon cycling Carbon degradation Lignin Mycena sanguinolenta superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Tricholomataceae;genus:Mycena; 20432.4866 4500.301 6407.0715 7897.8422 5084.5114 5819.8356 6738.0935 5904.6941 7499.5619 6109.5219 11724.3669 5450.8772 168698322 Catechol Organic Remediation Aromatics Other aromatics Gemmata obscuriglobus UQM 2246 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Gemmata;species:Gemmata obscuriglobus; 10020.4938 9288.2524 8252.7138 10022.2598 11036.7059 9330.9289 8118.7877 7822.144 10874.7131 9337.5191 9026.4519 9200.8932 171060316 SMR_antibiotics Antibiotic resistance transporter Leptothrix cholodnii SP-6 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Leptothrix;species:Leptothrix cholodnii; 4779.3188 5092.0143 5171.9713 7266.0849 3044.0672 5572.4137 7724.6707 5880.2677 5223.22 4683.8454 5165.8423 7023.0252 227115542 ahpF Stress Oxygen stress Pectobacterium carotovorum subsp. brasiliensis PBR1692 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium carotovorum; 768.1975096 1229.8774 905.7402076 851.0259431 1324.0771 1227.8963 839.0816 1070.5023 916.4193 1348.0085 222148751 CopA Metal Resistance Copper Agrobacterium vitis S4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium vitis; 1876.1696 1212.8237 1248.0404 1972.1833 1196.6311 1889.2035 1479.4414 1528.1039 1564.9065 1714.6865 1033.177974 1587.844 4490992 nagG Organic Remediation Aromatics Aromatic carboxylic acid Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 4729.2029 3606.398 6943.4477 4631.2017 6237.9526 3809.1272 5234.186 3316.9217 4916.9112 4599.9854 4968.9126 5566.2564 214029943 pcaG Organic Remediation Aromatics Other aromatics Ruegeria sp. R11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 2256.5319 5534.9965 4120.4611 3661.4854 4011.4585 5031.5046 4371.1202 3270.5381 4887.4161 5322.544 2680.9776 5881.0156 119475716 pimF Organic Remediation Aromatics Aromatic carboxylic acid marine gamma proteobacterium HTCC2143 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 1939.3551 1961.9457 1572.3581 1661.9755 1953.4958 1891.7012 1217.5188 1551.6225 1594.5647 1589.1198 1391.0486 1587.9264 14026839 nmoA Organic Remediation Aromatics Nitoaromatics Mesorhizobium loti MAFF303099 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium loti; 1259.5331 1043.5898 1102.1366 1168.2893 1392.4452 974.5068 991.4865 1277.2065 1085.5877 1176.1733 847.1556 1228.798 262402888 pstC Stress Phosphate limitation Vibrio sp. RC586 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 621.9726785 628.7428431 410.864628 297.0283847 370.7379579 620.3298 410.5134508 169606492 ABC_multidrug_fungi Fungi function metal resistance Phaeosphaeria nodorum SN15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Phaeosphaeriaceae;genus:Phaeosphaeria;species:Phaeosphaeria nodorum; 2795.1805 5165.8701 3417.4043 2616.2136 3582.1767 4608.0772 2863.5653 7119.7654 2520.3289 3844.4634 6042.4761 3843.4784 42741693 pstC Stress Phosphate limitation Alcaligenes faecalis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Alcaligenes; 964.8419 982.3108 1301.5311 1026.8623 1279.718 1018.5681 829.4466 948.636 950.926 1080.3875 1783.971 1157.9803 126032271 endochitinase Carbon cycling Carbon degradation Chitin Hypocrea jecorina superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Hypocreaceae;genus:Hypocrea; 2610.306661 2917.7202 3390.335572 2261.38605 2378.9098 3088.204062 2273.1066 3061.2613 2985.269963 2430.550283 2528.6976 2643.681081 83972408 nosZ Nitrogen Denitrification uncultured alpha proteobacterium superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 571.9069 441.0336787 609.9097 1072.1566 394.6065583 387.0960538 91795175 nirK Nitrogen Denitrification nitrifying uncultured bacterium superkingdom:Bacteria; 1389.2622 1542.189 855.6923 1409.2151 1209.8269 1470.7864 1094.6268 736.5208 1218.8981 1442.3256 1073.4512 1365.38 2632576 TerZ Metal Resistance Tellurium Bacillus subtilis subsp. subtilis str. 168 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus subtilis; 1438.31695 1303.0856 1343.3176 1268.87025 938.8762 1062.5994 1264.1682 1567.78775 1389.79965 1220.3366 1268.6432 1306.02875 255708192 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 1183.1839 3016.5027 1547.5828 919.3094 3000.4982 1829.2587 2497.4356 1309.0892 2203.2099 1413.17 1134.7781 1524.277 122091101 NiR Nitrogen Assimilatory N reduction Yersinia enterocolitica subsp. enterocolitica 8081 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia enterocolitica; 1637.397 588.6551 932.2282 1363.931 678.2572425 702.8259 1145.3596 816.8205 879.7743 1170.0876 827.2631174 969.9158 119959613 CopA Metal Resistance Copper Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 904.3749244 721.4707 986.9752 491.9685322 668.0505961 681.8006 295797449 fccAB Sulphur sulfide oxidation Thiomonas intermedia K12 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Thiomonas;species:Thiomonas intermedia; 2747.5294 1451.0776 1739.72215 3013.1062 1573.6604 2224.9572 2508.56745 2566.1905 1594.419 2219.4658 2704.9301 1356.95055 148750574 coat_Nepovirus soil_borne_pathogen structural Grapevine fanleaf virus superkingdom:Viruses;order:Picornavirales;family:Secoviridae;genus:Nepovirus; 779.0732 711.7227 895.0217 939.5954 676.8568095 1391.4877 1160.0493 654.0878 976.6512 982.783 25028864 benD Organic Remediation Aromatics Aromatic carboxylic acid Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 2462.752025 6618.4322 4407.2234 4972.5029 5575.0325 6071.6845 3424.29305 2024.396296 5521.7939 6027.7053 3483.4954 5141.7621 256362530 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 3968.0618 2094.90155 2506.615488 4068.0553 5168.3884 2114.6097 2557.053061 2154.851 2381.26395 2544.6608 3434.7735 2932.57735 115256305 ZntA Metal Resistance Zinc Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 2126.3125 2172.81595 3013.7179 1957.51325 2495.15075 2702.7657 2221.3415 3415.36575 2730.5398 2591.95625 3349.6544 3180.8582 71549338 gyrB other category gyrB Nitrosomonas eutropha C71 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas;species:Nitrosomonas eutropha; 699.4332 465.9018 996.0275 833.9738 321.5342617 604.4995 480.8448 365.1316524 610.5381689 182636123 ahpC Stress Oxygen stress Beijerinckia indica subsp. indica ATCC 9039 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Beijerinckia;species:Beijerinckia indica; 935.0088 2072.6148 1346.8362 1244.2558 21064.56336 1540.9314 1241.4801 865.7944 1712.2655 994.8469 795.3824717 1787.1828 66847825 iro virulence Iron oxidation Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 6878.6794 4904.5713 7300.93 2403.1075 2270.1958 5727.2861 5384.6066 7834.4178 6295.3493 6218.8638 1625.1203 7534.047 71743269 pulA Carbon cycling Carbon degradation Starch Pelobacter propionicus DSM 2379 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter propionicus; 548.6184803 679.5605 941.3488 721.9361 800.2420868 770.5538 591.6655 560.5525879 5881858 chnB Organic Remediation Other Hydrocarbons Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 2069.5409 2984.7907 3103.8894 2404.3402 2259.806 3433.0215 2954.4554 3007.7665 3695.8347 3779.497 1908.2983 3646.323 256362354 sigma_70 Stress Sigma factors Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 2422.0715 2743.3192 2657.8907 3505.3473 2090.3836 3158.6883 2510.7525 2342.6004 3134.2745 3693.9843 2022.5833 2883.8069 291075730 cat_bac soil_benifit Clostridium sp. M62/1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium; 936.908136 452.2598978 830.3091105 1330.92 963.514 843.8302 598.2932881 920.9067 805.4248 1526.211 194364599 ppx Phosphorus Phosphorus utilization Stenotrophomonas maltophilia R551-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 556.8928231 717.4441 983.5069 926.6568 468.3790553 502.7945236 161507491 Al Metal Resistance Aluminum Lactobacillus helveticus DPC 4571 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus helveticus; 1869.1579 2094.3664 2239.4006 1212.2173 1314.0475 593.0423858 1038.9159 4107.8391 1429.1964 1671.0033 3148.5444 2001.5447 169762876 ara_fungi Carbon cycling Carbon degradation Hemicellulose Aspergillus oryzae RIB40 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus oryzae; 2236.1551 1029.70675 1517.84235 1339.89875 1225.4135 1299.5711 9001.563457 931.8392 1316.1671 1104.1358 23821234 merB Metal Resistance Mercury Pseudomonas putida superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 560.3686 822.5574 609.1015 894.6373 1143.7882 405.4469527 755.7946 458.6172 816.3319239 157146418 dmsA Organic Remediation Others Citrobacter koseri ATCC BAA-895 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter;species:Citrobacter koseri; 596.9985 1554.8084 2114.7682 717.1613 810.8425 1817.9069 1292.0982 1668.8039 1918.4284 1497.4544 1390.7985 302406735 rgh_fungi Fungi function carbon degradation Verticillium albo-atrum VaMs.102 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Plectosphaerellaceae;genus:Verticilium;species:Verticillium albo-atrum; 1960.8065 1261.2836 1281.0159 1640.6347 1760.9617 1283.5636 1220.6387 2055.1844 1500.3248 1482.804 2127.0423 1368.9092 21673475 dnaK Stress Heat shock Chlorobium tepidum TLS superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobaculum;species:Chlorobaculum tepidum; 1336.03 856.4788 860.232 553.1583 1146.7819 652.614 465.4333 668.3232 1147.3927 13425442 TerC Metal Resistance Tellurium Caulobacter crescentus CB15 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter;species:Caulobacter vibrioides; 2566.9926 4120.6875 2573.3338 3884.0702 3274.9564 3286.0759 3116.5182 2218.7495 3789.7601 3635.6955 1799.7791 3583.0718 222477146 dsrA Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 2673.4033 6557.3317 6557.8605 2886.4657 3522.7955 4564.3749 5092.0929 5764.5509 5960.4812 5756.4164 4496.613 6963.1247 167839931 pcaG Organic Remediation Aromatics Other aromatics Burkholderia thailandensis MSMB43 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia thailandensis; 1432.8232 1567.8567 1233.8498 1449.1707 2272.5089 1344.0019 1537.2628 736.6418 1164.1132 935.4693 1370.4355 1467.8233 27544674 gyrB other category gyrB Legionella waltersii superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Legionellales;family:Legionellaceae;genus:Legionella; 1345.5132 2032.5522 2828.3661 1311.9489 1417.1684 1258.3174 1758.5465 1943.4136 1465.3546 1557.0051 1349.6061 2560.7534 1805413 cellobiase Carbon cycling Carbon degradation Cellulose Bacillus subtilis superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 946.9098 784.2915 1117.6357 1212.546 844.0201729 1002.5798 737.2374 802.9974 698.3304 799.395 1561.335 901.048 148255491 linB Organic Remediation Pesticides related compound Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 14806.4885 15012.5395 19192.4699 14091.1096 19809.776 17386.9539 14109.5844 25486.9822 17960.9125 15910.7502 15092.5682 18402.5967 115368799 vanA Carbon cycling Carbon degradation Others Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 2937.4285 1324.7033 1832.7022 2583.9559 1159.0722 1873.3847 2305.7337 2125.7766 1732.092 2385.3323 28948.01076 1818.0256 94471299 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1097.371284 1815.7122 1360.7214 1253.0153 535.3215532 1416.682 1537.513478 1843.1539 1493.5451 1243.5628 1553.8153 1387.2693 150031344 phn Organic Remediation Herbicides related compound Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 1684.5578 910.1911 1542.7111 526.322874 2045.9101 900.6668 502.5468 626.047 998.7812 71273718 per_fun soil_benifit Trametes versicolor superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Trametes; 3565.40185 3246.0067 2458.5325 3285.8582 3636.88445 3128.1899 4117.2038 3103.9894 2480.2158 3561.36045 3375.444455 2959.71935 239928467 ureC Nitrogen Ammonification Streptomyces ghanaensis ATCC 14672 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces ghanaensis; 7163.1486 6216.4938 7541.1514 5879.0325 2334.9616 8248.0637 10489.5576 4332.6759 7003.6201 9387.4555 5113.5648 5753.3871 77996979 dsrA Sulphur sulfite reductase Carboxydothermus hydrogenoformans Z-2901 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Carboxydothermus;species:Carboxydothermus hydrogenoformans; 599.6077747 1192.9708 1399.1929 784.6769301 1217.1403 1200.8891 1015.8804 1090.9956 1144.2891 149818977 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Plesiocystis pacifica SIR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Nannocystaceae;genus:Plesiocystis;species:Plesiocystis pacifica; 1612.0906 1485.2085 1983.9769 1416.1825 1433.8892 1098.1137 1503.116081 1627.9567 2052.661926 1520.4044 33596941 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bordetella parapertussis 12822 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella parapertussis; 5221.1474 4038.8676 4137.9376 2226.9847 1785.628 4153.3761 3356.8195 5022.8131 4148.3959 3141.2004 1327.6236 3943.189 161387290 pcaG Organic Remediation Aromatics Other aromatics Phaeobacter gallaeciensis BS107 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 3876.32595 4271.83335 4031.1378 4168.4102 2531.2876 4081.8028 5128.22985 4264.1839 4219.9204 4338.6514 3023.904478 3417.3018 157374123 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Shewanella sediminis HAW-EB3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella sediminis; 651.4799 517.7382681 508.2109419 753.7087 495.7787 401.7352659 1422.534 148651896 TerZ Metal Resistance Tellurium Psychrobacter sp. PRwf-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Psychrobacter; 2322.4711 1402.5221 1685.9551 2789.6653 1373.334 1249.7773 1261.4268 1260.0911 1518.7883 2168.2453 1873.7269 2277.2766 78363134 cap virulence capsule Thiomicrospira crunogena XCL-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Thiotrichales;family:Piscirickettsiaceae;genus:Thiomicrospira;species:Thiomicrospira crunogena; 661.3526 2162.8704 2276.8689 1103.6644 1668.6098 1235.9876 1655.3067 3012.3177 1279.7056 2557.5189 891.8654 2361.4833 218775034 pheA Organic Remediation Aromatics Other aromatics Alcaligenes sp. OS2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Alcaligenes; 1018.2487 2839.7676 1959.3556 1851.9191 1155.9818 2165.162 2271.1051 2132.7567 2788.0914 2544.0299 779.2379397 2512.0173 226227772 pstC Stress Phosphate limitation Gemmatimonas aurantiaca T-27 superkingdom:Bacteria;phylum:Gemmatimonadetes;class:Gemmatimonadetes;order:Gemmatimonadales;family:Gemmatimonadaceae;genus:Gemmatimonas;species:Gemmatimonas aurantiaca; 1967.2808 2072.806 3264.0127 2075.4627 1538.9834 2630.3623 16623.37031 2707.9315 2534.7387 2505.4051 1701.951 2745.2063 156189724 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Methylobacterium chloromethanicum CM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium chloromethanicum; 1223.8435 1160.7448 1418.8502 804.7009835 977.0045 967.9152 1677.0591 929.8647 861.2348 1340.9089 20502025 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 6616.5616 6625.1476 7900.1022 3420.8199 3503.5705 8146.6003 6926.8131 8172.6838 11916.6173 7103.9017 2998.0062 7130.0002 40742599 pheA Organic Remediation Aromatics Other aromatics Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 2048.6805 5587.9163 6400.1943 3589.9843 3473.7472 3137.9189 2397.0138 6356.2561 4008.1194 4020.4802 6161.1096 5954.5935 256680816 AceB Carbon cycling Carbon degradation Others Streptomyces sp. SPB78 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 3672.2961 3134.9489 3686.0795 4294.5028 1736.9779 3571.6812 4808.5259 1741.4901 3451.6497 3249.8835 3087.9544 3389.2809 30250065 phoB Stress Phosphate limitation Nitrosomonas europaea ATCC 19718 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas;species:Nitrosomonas europaea; 638.4273376 787.0694 448.2392626 857.4651 755.5361747 805.77 1189.6461 888.5141 745.3455 801.0364 824.7885835 564.0974 239797924 katE Stress Oxygen stress Desulfovibrio magneticus RS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio magneticus; 4604.39 4643.0473 1743.8077 3607.2158 3027.2122 2074.0184 2315.9001 1888.1697 2438.3554 2193.9058 5250.8173 77959534 gyrB other category gyrB Yersinia bercovieri ATCC 43970 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia bercovieri; 3055.7939 3730.9182 2510.5039 3576.3279 1814.0484 2526.5208 2947.2521 5042.882 2048.5936 3183.9344 4986.4746 3358.1222 208605300 hao Nitrogen Nitrification uncultured planctomycete superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales; 2232.8373 2325.7712 888.5544796 1430.3366 1678.0137 1381.3179 983.205 7730.073231 1285.8562 1309.4895 2474.0296 984.7467 157847012 MFS_antibiotic Antibiotic resistance transporter Shewanella pealeana ATCC 700345 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella pealeana; 1060.6814 864.1874 426.0955538 1035.0398 900.1988 641.5201 940.1457 739.0748 406.9660435 676.229 857.7504 1710.8721 56314391 ZntA Metal Resistance Zinc Azoarcus sp. EbN1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Aromatoleum;species:Aromatoleum aromaticum; 1631.8226 616.3701 949.5302 1573.2429 880.5551342 923.5807 904.8748 1290.5454 898.7853 1106.8408 1082.524505 1118.5547 253572321 pcc Carbon cycling Carbon fixation Bacteroides sp. 1_1_6 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides; 30923.6558 44884.6485 41499.0068 40399.2059 16525.4346 46791.8534 38735.062 21272.5972 39182.0982 41826.6168 36869.7582 27192.5219 260089627 sigma_24 Stress Sigma factors Streptomyces flavogriseus ATCC 33331 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces flavogriseus; 16273.8908 23820.3849 18612.6643 12328.0737 22309.6666 13440.1092 12101.1475 13214.7427 14834.2681 14040.448 12202.961 9815.4845 110630868 nifH Nitrogen Nitrogen fixation uncultured soil bacterium superkingdom:Bacteria; 500.7723615 623.7481 414.2056817 754.4365236 384.0597051 657.86345 548.9288 469.6036 402.9972 570.9686719 197241642 CadA Metal Resistance Cadmium Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 6686.1275 4672.6568 2411.8099 5327.2962 3789.5941 3902.5292 3119.7987 2863.5925 3846.2458 3219.4772 5876.1778 2512.0997 291070043 papC soil_borne_pathogen adherence Citrobacter youngae ATCC 29220 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter;species:Citrobacter youngae; 888.7345 1023.1125 959.3472 1121.745222 717.0792 896.2377 513.6448 15703.9781 842.7431 554.6751624 113935963 nagI Organic Remediation Aromatics Aromatic carboxylic acid Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 572.2594597 623.7099 547.6605891 533.8308755 619.3349 493.3849785 492.7718563 674.2302 159178582 glnA Stress Nitrogen limitation alpha proteobacterium BAL199 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 3957.2354 10007.6206 6576.471 3688.6887 11783.9012 6610.2754 5522.3334 6217.1659 7598.1119 7589.4449 5382.928118 5656.1621 196230092 exaA Organic Remediation Chlorinated solvents Chthoniobacter flavus Ellin428 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Spartobacteria;genus:Chthoniobacter;species:Chthoniobacter flavus; 2426.73255 2887.017 2659.8026 1867.97255 2105.2384 1959.1989 2533.95105 2912.158809 2352.5493 2701.5829 1752.6669 2707.2158 223691336 cytochrome Energy process Energy process Desulfobacterium autotrophicum HRM2 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfobacterium;species:Desulfobacterium autotrophicum; 493.6504 530.0968333 545.4217 606.7168 562.2017 859.7423 647.5877 432.7111 727.5536 260769410 GroES Stress Heat shock Vibrio furnissii CIP 102972 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio furnissii; 14346.2308 7873.7651 12648.0294 11529.9327 10703.0181 9899.8062 9779.8028 15677.4296 11790.2845 11243.4981 14301.6062 10994.1594 86566917 amyA Carbon cycling Carbon degradation Starch Frankia sp. CcI3 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 1256.6989 2305.9947 2178.1603 843.8634 924.048233 2222.3997 1897.818 2509.6393 2808.5702 1712.308 2424.8718 115390617 pheA Organic Remediation Aromatics Other aromatics Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 1712.9403 826.2783 1436.5303 1865.9864 1229.2984 1132.3256 1099.1346 875.4294 1312.5206 1500.9272 2333.4617 1177.9609 154509443 mer Metal Resistance Mercury Actinomyces odontolyticus ATCC 17982 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Actinomyces;species:Actinomyces odontolyticus; 1512.4901 2507.3908 2133.8876 1516.4941 2396.4161 2895.7622 2252.7383 3195.4081 2844.787 2785.1675 111224912 pimF Organic Remediation Aromatics Aromatic carboxylic acid Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 12807.1179 11669.1606 14428.3021 16312.9303 7239.3005 11517.0147 7206.182 11022.6226 11748.5697 12569.0673 9878.9811 16756.4863 85670044 CopA Metal Resistance Copper Roseovarius sp. 217 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 1948.4487 1272.8793 1486.2553 2398.6969 1188.2131 1582.0911 998.4374 1051.8613 1559.6761 1555.8214 1569.3832 1411.5069 259169348 ppx Phosphorus Phosphorus utilization Lactobacillus antri DSM 16041 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus antri; 1619.47835 785.0497 995.74395 1613.4383 1357.3511 764.76735 1002.89935 715.8709 752.7368 923.98465 926.2686 1167.85385 257799102 glnR Stress Nitrogen limitation Enterococcus casseliflavus EC30 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Enterococcaceae;genus:Enterococcus;species:Enterococcus casseliflavus; 1614.97185 1705.1833 894.62185 1361.623 2226.5889 914.51715 851.71025 1572.0424 945.71305 1150.09965 1665.9861 1030.55785 119537451 pimF Organic Remediation Aromatics Aromatic carboxylic acid Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 1904.6326 2932.2786 2723.3765 1942.3227 1510.4493 3306.2819 2666.7591 2241.7113 3923.5598 3288.7204 1292.5717 3371.2366 189208153 phenol_oxidase Carbon cycling Carbon degradation Lignin Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 682.3876 452.9329066 589.3632 621.8846456 500.5138 177842240 ara Carbon cycling Carbon degradation Hemicellulose Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 1585.32 834.7775 1451.9712 806.702 882.4905 818.767 803.1683 2138.8855 820.3763 907.6872 1827.7198 1393.2704 34103675 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Chromobacterium violaceum ATCC 12472 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Chromobacterium;species:Chromobacterium violaceum; 2748.0734 2521.4841 2391.7599 2554.0679 3281.2699 2485.8697 1730.4215 1720.7918 2150.9528 2142.3615 4135.9316 2115.9077 104781656 mauAB Organic Remediation Herbicides related compound Pseudomonas entomophila L48 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas entomophila; 3693.0355 2789.5492 2471.1019 2517.1257 2892.0876 2734.7872 1477.2965 1296.7186 2960.915 1912.9468 3227.4652 2177.6484 82744605 amyA Carbon cycling Carbon degradation Starch Clostridium beijerincki NCIMB 8052 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium beijerinckii; 1167.5487 980.6925 1557.1789 1157.8381 1733.0153 1182.5488 834.3099 944.6779 973.653 1122.0272 2291.6589 1471.6134 256361214 amyA Carbon cycling Carbon degradation Starch Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 8338.4881 7946.2702 8368.4626 10996.0853 9836.1565 10039.4082 8236.3805 5802.1951 10760.5535 10891.1184 9079.4983 7779.0596 17570825 major_capsid_protein Bacteria phage STRUCTURAL Enterobacteria phage T3 superkingdom:Viruses;order:Caudovirales;family:Podoviridae;genus:T7-like viruses; 670.903 394.8521484 553.4643 309.4669138 229816772 ppk Phosphorus Phosphorus utilization Bifidobacterium angulatum DSM 20098 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium angulatum; 1060.8157 876.1074 799.4884 696.9769 851.3859 1047.352489 674.272 188584599 fnr Stress Oxygen stress Methylobacterium populi BJ001 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 2589.935 8028.4852 7718.9547 6355.8433 4536.1258 9062.972 7323.1668 7064.2592 9407.4247 8616.0176 2612.7717 9740.3548 227377795 endochitinase Carbon cycling Carbon degradation Chitin Kribbella flavida DSM 17836 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Kribbella;species:Kribbella flavida; 2974.8509 1434.9519 1269.2535 2215.5199 1956.7378 1452.794 1328.5391 1659.2053 2005.4925 1520.6248 2342.6631 1701.0947 151422195 pstA Stress Phosphate limitation Nitratiruptor sp. SB155-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;genus:Nitratiruptor; 1248.8007 1652.8623 1418.79935 1324.55065 1845.161 1408.11955 1400.06745 1269.1693 1149.21415 1347.27305 2210.3596 1682.2539 171681764 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Podospora anserina superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Lasiosphaeriaceae;genus:Podospora;species:Podospora anserina; 7218.7583 5108.4777 3718.488 3232.0954 7076.7794 4876.6921 4979.3635 5156.3475 4678.0498 7649.7103 2681.6743 3954.9301 110635447 pstB Stress Phosphate limitation Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 19847.8983 13622.1356 17448.8512 23201.3745 14425.3058 19267.8866 16548.7512 19768.6011 17610.9086 19264.1466 15834.3999 16618.9843 227497116 xylA Carbon cycling Carbon degradation Hemicellulose Actinomyces urogenitalis DSM 15434 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Actinomyces;species:Actinomyces urogenitalis; 1042.9776 485.3651388 569.6734421 998.6728 614.0701 569.5048 819.2154 1313.0167 1096.4044 19067859 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas; 1211.432 557.3721 466.5590741 1080.7621 662.7281 1020.8273 1073.9032 459.702 832.9725 572.4192 241190129 ara Carbon cycling Carbon degradation Hemicellulose Bifidobacterium animalis subsp. lactis Bl-04 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium animalis; 2378.6852 723.5478 1593.6149 1926.0227 1398.9293 781.1669 1046.2568 1016.2263 1187.1082 1674.4873 1544.5579 1236.3508 148258707 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1946.9981 798.9582 1419.9552 1671.8377 25546.86789 1104.7462 1099.7654 1076.6387 1040.052 1168.8816 1593.1676 1070.5876 254283271 fccAB Sulphur sulfide oxidation gamma proteobacterium NOR51-B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 1524.0956 1794.6487 1642.9633 1699.643561 1012.2266 2743.1508 845.1687 1144.9274 951.7947 1122.717663 1195.79235 157368829 glnA Stress Nitrogen limitation Serratia proteamaculans 568 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Serratia;species:Serratia proteamaculans; 4176.84 5527.6822 4151.2994 4606.8338 4828.406 4080.3595 2868.1648 3623.9345 7686.9817 3475.0996 4625.3128 4646.2165 259507041 ureC Nitrogen Ammonification Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 1392.4994 584.106 898.264 1253.3509 810.4064 658.4954 1030.4738 481.6437693 623.9287 685.7987 756.2463963 898.6724 218166739 clpC Stress Protein stress Cyanothece sp. PCC 8801 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 2348.8924 2241.7723 2414.7614 2788.9941 2100.1288 2415.5751 1479.1203 1835.625 1735.8546 2187.1836 2498.4146 2512.4705 125713249 cap virulence capsule Clostridium thermocellum ATCC 27405 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium thermocellum; 2356.0787 3601.5813 3301.0593 2594.64 2406.2874 5804.3958 3510.9105 4045.7563 3907.9735 2971.5597 2020.277 3350.1987 15614424 ara Carbon cycling Carbon degradation Hemicellulose Bacillus halodurans C-125 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus halodurans; 908.2703131 799.1111 801.68077 891.5308 1260.5437 932.5096 779.2758 1345.2446 766.1505 998.4816 1124.2553 983.758 4468117 dehH109 Organic Remediation Chlorinated solvents uncultured beta proteobacterium superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria; 3311.9209 4479.7727 3636.0636 3599.011 4070.271 3648.0031 5339.9759 2362.3182 3758.2148 3144.3159 3502.5469 3008.4829 115386932 ABC_multidrug_fungi Fungi function metal resistance Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 752.1549 913.4086 213536813 exoglucanase Carbon cycling Carbon degradation Cellulose uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 2927.5558 2384.1831 3582.1803 1742.421 1694.8498 2012.6527 2150.6792 4023.6781 2027.0664 2234.1051 2278.6616 2970.6091 266629650 fnr Stress Oxygen stress Caulobacter segnis ATCC 21756 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter;species:Caulobacter segnis; 2191.036 2736.7186 2586.6763 1803.7312 3690.9286 2023.2418 2476.3304 1806.4416 2186.8432 1728.6892 15742.00774 2039.8305 71005826 sid_fun soil_benifit Ustilago maydis 521 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Ustilaginomycetes;order:Ustilaginales;family:Ustilaginaceae;genus:Ustilago;species:Ustilago maydis; 612.2978 464.9504 707.1073 15851.53495 417.7353123 309.7137324 487.2502767 588.4607 479.2727 3157736 nifH Nitrogen Nitrogen fixation unidentified nitrogen-fixing bacteria superkingdom:Bacteria; 963.942 571.6438 450.7109832 833.3026 700.2325 451.9308426 725.3198 652.7592 756.2606 704.4466 650.8744955 545.6393073 223986236 bglH Stress Glucose limitation Holdemania filiformis DSM 12042 superkingdom:Bacteria;phylum:Firmicutes;class:Erysipelotrichi;order:Erysipelotrichales;family:Erysipelotrichaceae;genus:Holdemania;species:Holdemania filiformis; 2205.825 2988.932 3042.5909 2327.1547 1489.044 2844.7906 3710.4581 3012.584 2485.4171 2264.0423 2601.312 1353.0758 116700123 obgE Stress Radiation stress Syntrophobacter fumaroxidans MPOB superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Syntrophobacterales;family:Syntrophobacteraceae;genus:Syntrophobacter;species:Syntrophobacter fumaroxidans; 2384.5686 2476.5793 2531.8479 2080.6677 1853.0102 1343.0447 1604.4899 3994.5875 2349.6487 2038.8039 5081.54 2758.2933 27351224 catechol_B Organic Remediation Aromatics Other aromatics Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 1420.3445 3212.7677 2624.2754 1784.9382 900.066 2025.7993 2435.657 2970.0496 2495.0391 2862.363 1293.0282 2368.6241 99082959 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 946.05685 680.01156 871.6276 807.2156625 911.11945 696.08358 905.8841667 821.5593333 668.0296 736.8229714 855.1558 685.4242333 82715000 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Pseudomonas putida F1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 4335.5426 1597.2028 3119.6066 4280.8601 1739.6891 2463.2408 2436.999 2239.6051 2663.6574 3114.6131 2520.3491 2635.8968 147851848 sigma_70 Stress Sigma factors Synechococcus sp. RCC307 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 1055.8457 997.8626887 1216.7785 853.8601547 1482.228 2732.6059 975.1444 1687.4338 1147.4755 115491043 ABC_multidrug_fungi Fungi function metal resistance Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 3875.8491 2631.1083 2573.7943 3423.7374 3949.9349 2949.7838 1917.26 8238.245718 2655.9458 2428.7586 5747.5981 2918.8381 262195767 hrcA Stress Heat shock Haliangium ochraceum DSM 14365 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Haliangiaceae;genus:Haliangium;species:Haliangium ochraceum; 735.6601 1698.4552 1092.8604 1080.4197 806.2922 1795.6669 1553.5162 1376.8852 2056.1771 1711.0127 1907.4919 75817278 endochitinase Carbon cycling Carbon degradation Chitin Vibrio cholerae V52 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio cholerae; 881.2527 549.4845 900.2413 825.3581 1028.2325 630.243 532.9641 555.4166 598.5922 607.801 1409.7637 853.2732 280960577 SMR_antibiotics Antibiotic resistance transporter Frankia sp. EuI1c superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 1295.3705 1195.2389 1917.3947 678.2055 1632.09 969.6128 1740.2071 1614.461 1297.5526 1404.4485 149371314 pcc Carbon cycling Carbon fixation unidentified eubacterium SCB49 superkingdom:Bacteria;phylum:Bacteroidetes; 1885.0214 1742.5444 1862.9588 2228.6695 2231.1582 2001.2261 1754.7957 1707.0898 1593.3881 1841.6602 2646.0939 1915.6626 170116610 katE Stress Oxygen stress Laccaria bicolor S238N-H82 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Tricholomataceae;genus:Laccaria;species:Laccaria bicolor; 4727.291067 3923.182167 5922.5916 4592.880567 3272.093533 4144.467133 4148.827233 5423.5412 4250.801725 3616.30215 5057.277767 4754.432033 29139770 amyA Carbon cycling Carbon degradation Starch Salmonella enterica subsp. enterica serovar Typhi Ty2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 1844.5768 968.0902 1730.0679 1198.5882 1787.9195 2231.7393 2886.5059 1740.6307 1863.7363 1516.0101 158312372 tfdA Organic Remediation Aromatics Chlorinated aromatics Frankia sp. EAN1pec superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 2503.9145 3328.8651 3999.7834 2695.44 5236.7944 2957.7555 4070.0268 2113.527 3358.9591 2547.2346 3648.2081 2728.5627 224944414 narI Stress Oxygen limitation Corynebacterium matruchotii ATCC 33806 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium matruchotii; 2107.6618 3862.294 3378.7147 3484.1161 2945.8378 4359.0998 3015.8096 2920.5431 3813.2211 4330.4831 3073.0351 4847.9447 116193589 AceB Carbon cycling Carbon degradation Others Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 3952.4132 2492.698667 3090.401567 2994.8451 2134.534067 2724.023611 2356.170833 2896.031933 3052.689167 2882.715733 2953.6328 2058.31425 73542987 sped_bac soil_benifit Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 701.8644 778.4172 679.5068 551.897939 1256.0817 948.4182 542.3046 810.2487 455.7492 188030614 pstC Stress Phosphate limitation Erwinia tasmaniensis Et1/99 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Erwinia;species:Erwinia tasmaniensis; 1472.2201 821.7439505 874.3390954 992.3123 706.8411 501.8579999 475.4896487 1188.761292 145218835 gyrB other category gyrB Prosthecochloris vibrioformis DSM 265 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium phaeovibrioides; 837.947 514.9394 851.6504 1281.3487 408.8121803 727.3942 573.547 495.0420975 545.8727565 121997742 spe soil_benifit Halorhodospira halophila SL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Halorhodospira;species:Halorhodospira halophila; 1313.3026 3209.2763 3597.1269 1838.3859 1587.2354 3262.5347 3502.9043 3453.0948 3984.6818 3666.3474 1142.2978 4364.9918 227953141 grpE Stress Heat shock Meiothermus silvanus DSM 9946 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Meiothermus;species:Meiothermus silvanus; 2909.3684 6632.6402 3303.9091 3095.4489 5566.5197 4107.55 4237.408 2375.0277 4672.8543 3178.7197 4491.4957 2898.9537 150959639 sid_bac soil_benifit Pseudomonas aeruginosa PA7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 2645.3029 1199.6861 1636.7535 2199.6992 2058.3799 1682.2085 1750.1273 1526.9782 1408.6476 2195.6925 1570.2 2210.3039 118705669 nagI Organic Remediation Aromatics Aromatic carboxylic acid Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 2539.6176 1970.152 3295.1709 3015.017 1776.7929 2569.6249 2869.9198 2794.1019 2063.7722 2609.4764 1927.59 2468.8428 63029734 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1463.1398 1309.462263 1953.9324 1758.5841 2252.1274 1871.8243 1322.7925 1867.4472 1476.293 1412.3325 2629.5889 2711.4385 122087483 hasA soil_borne_pathogen iron uptake Yersinia enterocolitica subsp. enterocolitica 8081 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia enterocolitica; 797.10398 760.3374237 739.4661083 884.7642 1089.299257 799.5781 832.0274 671.6427 695.5135 1056.0313 88858182 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Pseudoalteromonas tunicata D2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Pseudoalteromonadaceae;genus:Pseudoalteromonas;species:Pseudoalteromonas tunicata; 1495.2027 3589.2847 2854.479 1473.7304 3229.1691 2503.6826 2894.7414 2143.473 2567.2159 2034.7058 2001.5137 1639.615 99083225 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 379.0213172 341.6945729 562.80895 555.736 734.1227 512.5332775 507.0299 509.1541 325.1558041 447.32235 724.1014799 783.403 108761575 phtA Organic Remediation Aromatics Aromatic carboxylic acid Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 3650.6029 3191.4112 3507.2583 4286.7774 5492.0656 3371.1024 3223.8374 2776.9138 3660.6549 3718.3607 3847.7084 4258.1953 227331870 glnA Stress Nitrogen limitation Citrobacter youngae ATCC 29220 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter;species:Citrobacter youngae; 1425.0996 1059.6072 1918.2961 1095.1034 1101.8145 1349.79 1229.6084 2335.4468 1188.9953 1110.4476 2102.1048 1555.3807 188586486 CopA Metal Resistance Copper Natranaerobius thermophilus JW/NM-WN-LF superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Natranaerobiales;family:Natranaerobiaceae;genus:Natranaerobius;species:Natranaerobius thermophilus; 1191.3373 650.4387823 586.9307904 3860041 cumA Organic Remediation Aromatics Other aromatics Cycloclasticus sp. W superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Thiotrichales;family:Piscirickettsiaceae;genus:Cycloclasticus; 733.0273 932.0415 532.8431 820.1804 1009.2802 755.3604 655.6158 789.1805 726.0202 655.1292 283810631 sigma_70 Stress Sigma factors Kribbella flavida DSM 17836 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Kribbella;species:Kribbella flavida; 2631.105 912.3329 1546.8413 2146.4295 1411.7839 1537.282 1914.3351 2608.5676 1272.2619 1865.0427 1197.00173 1764.7304 116194332 sir Sulphur sulfite reductase Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 575.1978 985.2377784 611.9959 792.2302632 50119720 chpD soil_borne_pathogen chemosensory system Pectobacterium atrosepticum SCRI1043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium atrosepticum; 726.4522 647.0071 543.8183163 655.6612 22141.86286 635.8339 412.2875583 523.3655127 34500582 coat_Nepovirus soil_borne_pathogen structural Raspberry ringspot virus superkingdom:Viruses;order:Picornavirales;family:Secoviridae;genus:Nepovirus; 485.0671 1294.822 644.6247347 945.5538 942.1752 555.97755 727.5336 1934.2022 560.5701 1017.6544 1406.976744 1027.4681 151281317 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Janthinobacterium sp. Marseille superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Janthinobacterium; 835.2384918 373.4427922 774.7183 410.5791926 487.1003 508.308 254169923 pstB Stress Phosphate limitation Thermococcus barophilus MP superkingdom:Archaea;phylum:Euryarchaeota;class:Thermococci;order:Thermococcales;family:Thermococcaceae;genus:Thermococcus;species:Thermococcus barophilus; 1994.9782 1282.2324 2463.3523 1876.5883 2587.1803 1908.9907 1512.9918 2141.9479 1602.3461 1969.6947 3726.1439 2652.2383 154253049 fnr Stress Oxygen stress Parvibaculum lavamentivorans DS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Parvibaculum;species:Parvibaculum lavamentivorans; 1117.9567 2636.2308 1585.6327 1494.6328 1726.2657 2248.5433 2028.4868 1662.776 1737.8582 2359.5155 1056.506 2396.9814 37651310 nbz Organic Remediation Aromatics Nitoaromatics Xanthobacter polyaromaticivorans superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter; 1537.904 1008.6497 883.09925 876.5000333 849.719 805.274 661.6218333 1459.8116 684.2294 727.77055 1956.4436 936.2784 3192697 non_contractile_major_tail_protein Bacteria phage STRUCTURAL Enterobacteria phage N15 superkingdom:Viruses;order:Caudovirales;family:Siphoviridae;genus:N15-like viruses; 3210.8429 1314.4965 1733.5138 2029.812618 1912.9603 1804.6033 1592.02745 1523.7948 1548.0388 1483.69735 3113.7087 1698.74645 126462908 hydrogenase Energy process Energy process Rhodobacter sphaeroides ATCC 17029 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 1458.4385 1627.9634 1713.173 2094.3242 1790.9557 1999.551 1506.8094 1402.6673 1857.3181 1764.0869 2153.2772 1953.6051 222082695 ChrA Metal Resistance Chromium Agrobacterium radiobacter K84 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 5925.5505 4316.0436 5864.9522 6847.4749 2162.1265 6200.3086 6854.9751 6555.5651 4432.3387 6507.617 4227.8737 4041.4576 20520950 narJ Stress Oxygen limitation Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 2323.7606 3907.0586 2825.3855 2999.5799 3782.143 3094.5457 2522.326 5717.5137 2449.6082 2834.9829 3325.2694 3818.4443 167358786 scnABC Organic Remediation Others Rhizobium leguminosarum bv. trifolii WSM1325 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1075.3629 1123.845203 864.2734595 968.9355 2340.7822 1266.2442 1157.3345 1327.6087 1465.3896 1585.9262 910.1479915 1201.1823 111018854 Catechol Organic Remediation Aromatics Other aromatics Rhodococcus jostii RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1525.35825 2181.2633 1133.2657 1177.4666 2054.09505 1161.8269 1524.69145 1008.419 1304.6401 1151.7523 1159.5475 792.4114 154277552 AceB Carbon cycling Carbon degradation Others Ajellomyces capsulatus NAm1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces capsulatus; 1777.7511 2620.66785 2498.52335 1725.532 2370.871 2011.6581 1628.33075 1999.0327 1836.31505 2139.9775 1993.5376 2169.7248 254805140 iro virulence Iron oxidation Neisseria meningitidis alpha14 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Neisseria;species:Neisseria meningitidis; 3494.1301 1271.2738 2357.4903 3596.1893 2192.822 1191.373 2353.1516 1823.436 12984.72048 1937.0663 1970.9064 1951.6002 218289270 pstB Stress Phosphate limitation Alicyclobacillus acidocaldarius LAA1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Alicyclobacillaceae;genus:Alicyclobacillus;species:Alicyclobacillus acidocaldarius; 1745.9837 2913.8529 2631.0072 1741.6951 3550.9125 2131.2561 1901.9358 2099.3892 2174.8914 2202.3477 1607.318 2297.6142 157406171 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Methylobacterium populi BJ001 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 1890.3541 3132.0564 2152.1056 1581.1327 3506.2628 2537.6633 2074.8151 3023.3689 2241.4301 2842.7547 904.4062 2687.1048 112790712 pstS Stress Phosphate limitation Prochlorococcus marinus str. MIT 9303 superkingdom:Bacteria;phylum:Cyanobacteria;order:Prochlorales;family:Prochlorococcaceae;genus:Prochlorococcus;species:Prochlorococcus marinus; 8545.1843 20962.80439 11384.9988 5016.6637 2475.9068 7393.0726 6236.7757 14486.5144 7606.2895 6883.6583 5872.8864 10108.0659 213970036 AceA Carbon cycling Carbon degradation Others Pseudomonas syringae pv. tomato T1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 3197.0076 1161.8917 2457.1731 2852.9068 1330.2579 1389.2298 1842.2906 2258.161 2066.2301 1738.3817 2480.6604 1937.7305 254516757 pilin virulence pilin gamma proteobacterium NOR5-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 3717.423133 3770.3926 4858.69625 4732.042572 5169.2415 4835.310042 5091.1236 4674.120922 4096.1388 3881.618911 4592.4711 4288.99005 213407698 ATP_sulphurylase Fungi function Sulfur Schizosaccharomyces japonicus yFS275 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Schizosaccharomycetes;order:Schizosaccharomycetales;family:Schizosaccharomycetaceae;genus:Schizosaccharomyces;species:Schizosaccharomyces japonicus; 560.0359988 1186.179 653.9883 2767.9216 813.2781 2162.9752 662.3216 1149.9946 647.7434 671.7453 93357298 fnr Stress Oxygen stress Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 5833.3915 3689.8108 6986.7026 6367.4862 2982.9985 6344.9808 7903.9962 7773.9569 4577.3563 6514.5067 10639.82318 4645.6123 86136956 nasA Nitrogen Assimilatory N reduction Roseobacter sp. MED193 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 5662.2237 6758.9189 5647.4561 4699.4975 8176.6031 6053.8866 4894.6444 4411.2448 4780.9215 5485.4848 6997.3099 4921.6051 177842850 amyA Carbon cycling Carbon degradation Starch Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 2292.1544 1912.6066 2126.0654 2054.0945 2470.7688 2687.7048 1892.1173 2585.0611 2090.2502 2279.8763 1852.2969 2517.3043 229809490 pstS Stress Phosphate limitation Collinsella intestinalis DSM 13280 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Coriobacteriales;family:Coriobacteriaceae;genus:Collinsella;species:Collinsella intestinalis; 912.55 605.3988 861.6681 940.4721 771.7858 704.2617 644.3744 838.5719 609.5422 583.983 1073.8277 770.2337 119373905 glnA Stress Nitrogen limitation Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 18087.12238 4295.6301 3190.8791 2921.0931 3826.9823 4073.3001 3475.2955 2440.4029 4059.5262 4366.8746 2762.7813 4239.0249 148259748 nitA Organic Remediation Aromatics Other aromatics Acidiphilium cryptum JF-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Acidiphilium;species:Acidiphilium cryptum; 3746.6572 3978.9011 4227.8934 3849.6894 4734.9544 4394.2621 3671.4019 3415.7168 3211.239 3582.2305 6248.9195 4298.0054 73660244 mer Metal Resistance Mercury Dehalococcoides sp. CBDB1 superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides; 9607.8536 8348.438 5242.953 5951.3828 7154.286 4943.9655 3421.4427 5503.0744 5280.7774 3879.5707 13893.3561 3279.2848 226940939 cap virulence capsule Laribacter hongkongensis HLHK9 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Laribacter;species:Laribacter hongkongensis; 8056.974 4276.4907 4444.3718 4860.9776 6460.9926 5207.0765 6624.0679 5555.7522 4742.247 5305.772 5458.1977 4978.2647 151575350 ArsC Metal Resistance Arsenic Ralstonia pickettii 12D superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 686.4749419 1521.1808 867.99558 1160.331 1294.5565 1397.1081 456.7209345 1120.7092 1393.4724 269219424 sigma_70 Stress Sigma factors Actinomyces sp. oral taxon 848 str. F0332 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Actinomyces;species:Actinomyces sp. oral taxon 848; 1856.545 3229.14825 2297.47135 1967.80015 3160.4977 2588.4324 2209.3264 2248.98595 2306.2331 2674.9062 2199.23625 2718.9707 260861585 ahpF Stress Oxygen stress Selenomonas sputigena ATCC 35185 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Veillonellaceae;genus:Selenomonas;species:Selenomonas sputigena; 12784.2517 27627.8477 20069.6662 25325.5318 36951.9326 19671.4222 23424.5754 15471.318 17731.6381 17765.9329 33709.4016 17744.419 2329993 dsrA Sulphur sulfite reductase Desulfovibrio simplex superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio; 1089.6548 470.5582527 786.7606 933.3493 1205.0681 829.0719 864.6716 656.7778 714.7554 694.3522 1454.0651 787.3003667 21436536 sox Sulphur Sulphur oxidation Paracoccus denitrificans superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus; 1185.7226 541.4694 790.7008 1234.01 1028.934 855.6791 869.363 730.9165 900.8355 821.5157 1244.7628 928.6501 222451842 pstB Stress Phosphate limitation Halorubrum lacusprofundi ATCC 49239 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halorubrum;species:Halorubrum lacusprofundi; 698.3586 609.6053621 1118.1427 820.6620658 417.0979031 735.6144 422.9014102 669.66825 614.75215 749.6156064 145297698 pulA Carbon cycling Carbon degradation Starch Aeromonas salmonicida subsp. salmonicida A449 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas;species:Aeromonas salmonicida; 847.4974 751.1244 634.0711722 425.6383198 512.6850839 89098392 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Bacillus sp. NRRL B-14911 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 1345.9833 1723.9913 1664.7129 1755.0365 2810.9787 2458.355 2507.3574 1222.5799 1973.225 1656.9336 1930.3769 1991.012 76164407 linB Organic Remediation Pesticides related compound Chloroflexus aurantiacus J-10-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aurantiacus; 704.0673 2794.0346 2775.0062 1444.4451 2037.0125 1419.2769 2511.7046 3814.8955 2122.9488 3108.9629 1361.0899 2849.4349 239991996 proV Stress Osmotic stress Streptomyces roseosporus NRRL 11379 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces filamentosus; 2076.7809 5224.7535 4605.2221 3453.6117 3070.7622 4806.4275 4632.6185 4539.4048 6872.2201 5829.7912 2485.153 5396.8954 88183626 endochitinase Carbon cycling Carbon degradation Chitin Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 1841.568 1486.0368 1151.6727 2116.5552 2523.9692 1398.3082 2370.8387 1276.7829 2996.8986 1722.0787 1596.2667 1607.5637 70733269 ppk Phosphorus Phosphorus utilization Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 11340.9155 8660.6306 13788.6472 9031.148 9308.0323 8789.93 7995.5172 12199.3314 9533.6409 8225.9549 14351.3612 10168.09 312878933 sped_bac soil_benifit Aminomonas paucivorans DSM 12260 superkingdom:Bacteria;phylum:Synergistetes;class:Synergistia;order:Synergistales;family:Synergistaceae;genus:Aminomonas;species:Aminomonas paucivorans; 2450.8435 1956.8232 1280.6379 2112.4186 2083.3686 1497.3338 1476.2298 16217.41003 1472.2974 1447.5292 2727.1769 1880.3018 169809928 oxdB Organic Remediation Aromatics Nitoaromatics Shewanella woodyi ATCC 51908 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella woodyi; 17709.33241 387.2344763 430.0066882 618.3748 455.2660704 492.1989 669.7415 341.0856777 329.4827702 597.4808 111150931 MFS_antibiotic Antibiotic resistance transporter Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 2691.3354 2490.5197 1415.2881 2622.8432 1870.7753 1731.8783 1589.0624 1076.1303 1754.4347 1636.8452 2994.0182 1516.477 260879011 pilin virulence pilin Vibrio parahaemolyticus AN-5034 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio parahaemolyticus; 673.3476 695.8072 606.471 849.3424 685.4766 883.8613 536.7064092 693.236 643.7682 951.4944 831.6448 110285254 MFS_antibiotic Antibiotic resistance transporter Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 3373.9379 3970.4783 3743.3796 3151.6224 3994.6983 3291.6696 2615.4528 3099.0206 2701.7961 3001.966 3407.7699 4047.4724 254250433 pstB Stress Phosphate limitation Burkholderia cenocepacia PC184 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia cenocepacia; 9621.2187 7219.5241 9402.0747 9041.3526 9121.6601 8883.7807 7705.7678 10575.3698 8935.3632 8147.3319 10389.5599 10506.6061 207742911 pstA Stress Phosphate limitation Ralstonia solanacearum IPO1609 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 2338.8853 1947.0879 1625.1365 2711.7949 3888.6766 1749.7959 3011.428 1602.3757 1550.951 1741.0728 2611.4263 1996.3951 209519935 CysJ Sulphur sulfite reductase Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1218.8645 3145.6654 2387.02 2016.1113 2310.4469 1821.302 4129.6834 1986.4564 2213.8571 1781.5177 2455.1223 1595.4929 209420752 pmoA Carbon cycling Methane Methane oxidation uncultured methane-oxidizing bacterium superkingdom:Bacteria;phylum:Proteobacteria; 3115.6482 1004.7123 1883.0815 2085.2427 1469.6863 1025.8219 1791.076 1438.157 1285.5883 1776.5821 2414.0883 1488.6827 187728538 akbF Organic Remediation Aromatics BTEX and related aromatics Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 1165.07045 1078.0775 1264.38275 1366.56095 829.7641 1482.5196 1558.15015 1291.9737 1092.2683 1317.7304 1101.9485 903.0736 29832350 TerD Metal Resistance Tellurium Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 2392.0369 4723.7035 3065.9995 3936.2851 2405.2825 4447.8953 5153.3898 13396.3673 3957.563 4031.2446 3002.7151 1861.4473 152972032 TerC Metal Resistance Tellurium Klebsiella pneumoniae subsp. pneumoniae MGH 78578 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella pneumoniae; 1105.4781 2163.8006 1039.2243 947.2934 1365.7691 1919.7442 1191.814 884.9373 1097.85985 1507.11895 1658.1811 219680589 P450 Energy process Energy process gamma proteobacterium NOR51-B superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 1177.8513 1096.4869 1112.245 498.4681694 549.6906894 737.4795732 228861756 dnaK Stress Heat shock Synechocystis sp. PCC 6803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechocystis; 1069.3721 1629.5307 1462.8467 1127.1556 1149.0616 969.3021 1082.7436 2557.8104 970.3331 1373.2388 2151.0429 1346.0448 226088799 glnA Stress Nitrogen limitation Gemmatimonas aurantiaca T-27 superkingdom:Bacteria;phylum:Gemmatimonadetes;class:Gemmatimonadetes;order:Gemmatimonadales;family:Gemmatimonadaceae;genus:Gemmatimonas;species:Gemmatimonas aurantiaca; 870.7487 561.2841316 1005.8366 932.9608 693.4458948 583.2839073 550.5753 861.9941 874.5034 32816567 endochitinase Carbon cycling Carbon degradation Chitin Chromobacterium sp. C-61 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Chromobacterium; 439.6281919 400.4054461 613.7719 396.2455885 220710265 ChrA Metal Resistance Chromium Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 386.5031499 436.3604641 514.341287 990.2376 588.2607 468.7079 667.4211705 473.2341 726.383817 257443791 sigma_70 Stress Sigma factors Campylobacter gracilis RM3268 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Campylobacteraceae;genus:Campylobacter;species:Campylobacter gracilis; 4858.4754 4009.0882 4525.2259 5843.0765 3769.6865 3637.773 4421.8416 3011.9667 3723.9786 4332.1693 4079.5939 3567.2659 163759009 nhh Organic Remediation Aromatics Nitoaromatics Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 5612.0004 1451.428 4210.5623 4063.6858 2865.2409 2059.78 2641.7884 2088.3743 2202.1965 3364.9202 3163.3195 2563.1154 157084186 ahpC Stress Oxygen stress Citrobacter koseri ATCC BAA-895 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter;species:Citrobacter koseri; 1942.4579 2894.9939 3073.9962 1760.9401 1673.7668 2989.2684 2659.3952 2953.1883 3816.5527 2478.36 2139.8474 2453.696 239905177 APS_AprB Sulphur adenylylsulfate reductase Desulfovibrio magneticus RS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio magneticus; 985.9843 570.3199664 810.4455 488.4948 565.9221902 811.917 742.789 754.7982 660.6694 889.4635 562.4495 149124661 linB Organic Remediation Pesticides related compound Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 1405.663 1033.8035 1172.2169 1062.0102 1150.7517 1948.7343 1547.5918 1080.2408 1304.3306 753.9640592 947.6694 212716924 groEL Stress Heat shock Bifidobacterium catenulatum DSM 16992 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium catenulatum; 1941.6251 857.9308 1025.0337 1497.523 901.1594 961.779 943.1968 704.4081 1118.1115 1483.6638 1095.5861 1290.7309 209963494 nagK Organic Remediation Aromatics Aromatic carboxylic acid Rhodospirillum centenum SW superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum centenum; 5659.5641 3777.8363 5255.5006 5180.308 3315.3971 5345.4969 5049.1942 5457.5986 4260.482 4865.9962 4649.0731 4441.2612 212171354 alkB Organic Remediation Other Hydrocarbons Alcanivorax borkumensis superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax; 680.3094819 774.911 760.4729 777.8167 529.2720975 566.7372753 669.1129361 1300.7641 726.4250697 194367182 iro virulence Iron oxidation Stenotrophomonas maltophilia R551-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 1498.4399 3411.7937 3238.4378 2412.367 1789.7233 3433.7842 3575.6714 2376.6013 4254.6925 4080.176 1384.1696 3166.0891 114571329 obgE Stress Radiation stress Maricaulis maris MCS10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Maricaulis;species:Maricaulis maris; 10248.2921 5082.5848 8554.2773 9976.8388 6264.496 6868.406 7507.7075 7846.3889 7234.8631 9740.8289 6376.1778 8348.801 113871488 mer Metal Resistance Mercury Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 1818.7733 3084.5266 3371.823 2096.3377 1292.6801 3338.6174 3477.9336 3517.8647 4072.9108 2301.7179 1397.4872 3348.0152 237624922 sigma_38 Stress Sigma factors Thauera sp. MZ1T superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Thauera; 2516.5409 1625.26195 2099.59625 2277.31625 1667.2257 1659.90115 1733.18965 1955.59655 1424.39115 1776.6156 1381.11435 1721.05465 15715 scaffold Bacteria phage STRUCTURAL Enterobacteria phage T3 superkingdom:Viruses;order:Caudovirales;family:Podoviridae;genus:T7-like viruses; 696.2805754 506.8236553 633.9475337 373.2657697 550.1821 487.9087077 89201527 ZntA Metal Resistance Zinc Bacillus cereus subsp. cytotoxis NVH 391-98 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus cytotoxicus; 2428.1698 1789.0165 2297.6313 2647.17 2984.2878 2008.7192 1593.3064 1818.3159 1861.8378 2052.4381 2978.7385 2433.9901 168194586 SmtA Metal Resistance Miscellaneous Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 4283.7611 1017.6077 1626.8812 2836.7163 1525.6738 1385.0121 2006.636 1188.5548 1655.5818 3004.8246 3113.3243 1796.3422 218757101 proV Stress Osmotic stress Desulfovibrio vulgaris str. 'Miyazaki F' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 9741.7064 10283.4205 13968.0402 7233.5807 5185.888 12086.0865 9748.4432 15065.7886 12304.9578 10230.6229 5176.6534 14023.8314 182382476 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 5852.7609 2516.884 4259.9239 6166.2285 3445.2699 2463.6596 2822.0201 2819.5571 2192.4463 3648.4699 6903.2776 3281.0838 239593121 phoA Stress Phosphate limitation Ajellomyces dermatitidis SLH14081 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces dermatitidis; 440.1879189 675.9295265 510.5296965 413.3148715 880.0605 88789809 AceA Carbon cycling Carbon degradation Others Nitrococcus mobilis Nb-231 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Nitrococcus;species:Nitrococcus mobilis; 2529.7448 2116.7041 2168.7387 2125.76 2669.0476 2241.2446 2031.5838 1959.9117 1883.3884 2184.3362 3126.658 2519.625 116251120 B_lactamase_A Antibiotic resistance Beta-lactamases Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1076.860048 2257.3054 1720.2829 1591.7072 3175.4378 1829.2737 1682.4301 1968.4452 2326.013 2223.8208 2346.8674 1859.4561 30138882 alkK Organic Remediation Others Nitrosomonas europaea ATCC 19718 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas;species:Nitrosomonas europaea; 1303.5373 769.1279 763.8319 1412.9545 1064.8054 559.5446 712.0717 755.706 613.5378 581.8167 1634.8502 921.2209 67159150 nmoA Organic Remediation Aromatics Nitoaromatics Azotobacter vinelandii AvOP superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Azotobacter;species:Azotobacter vinelandii; 5922.4342 2934.6614 4045.4519 4732.7825 3491.0193 3548.3494 2932.8225 2993.1929 3563.8989 4347.78 4023.3042 3594.195 213923415 ArsC Metal Resistance Arsenic Pseudomonas syringae pv. tomato T1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 1001.1472 1538.74635 1729.71895 1261.1585 1863.3621 1146.12275 1033.2037 1881.3429 1228.26385 1540.5457 1813.6173 2391.2413 119401893 nagG Organic Remediation Aromatics Aromatic carboxylic acid Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 4295.5681 3126.1693 4633.6032 1913.0511 2720.8071 4609.7373 3684.2142 4980.8355 4172.9868 4080.377 2479.1709 4677.4576 157372735 AceA Carbon cycling Carbon degradation Others Serratia proteamaculans 568 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Serratia;species:Serratia proteamaculans; 1571.85415 1155.87085 1031.65645 1224.83265 2200.0266 1399.86365 1084.20035 1143.170126 1479.497932 1052.34855 854.2667692 969.3253 86141195 gyrB other category gyrB Flavobacterium sp. MED217 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Leeuwenhoekiella; 2301.1271 1370.6147 2002.0145 2246.5721 1088.884 1232.4729 1219.6522 1825.4453 1507.419 1616.2766 1394.6523 1461.7398 84515011 BchY other category chlorophyllide reductase Loktanella vestfoldensis SKA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Loktanella;species:Loktanella vestfoldensis; 1586.6498 553.2194146 1141.4805 1387.1346 713.2654 646.5309 802.2833 694.8707 833.9660987 895.4449356 150028091 SMR_antibiotics Antibiotic resistance transporter Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 2948.0669 4504.2767 3087.0963 2956.5149 5190.4573 2684.7135 3891.0109 3085.9964 2577.2107 2441.1869 4103.0659 3259.1807 62003541 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1681.3207 3286.6363 1989.685 1419.2827 3563.8997 1715.3666 2601.1953 1367.1655 1782.462 1561.293 2439.4342 1651.6994 156744289 AceB Carbon cycling Carbon degradation Others Roseiflexus castenholzii DSM 13941 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus;species:Roseiflexus castenholzii; 4053.8808 3358.7974 3627.4999 4889.6739 2421.455 4598.9389 5169.3563 4651.0788 3965.5775 4746.3552 3589.1076 4005.4789 258634967 pstB Stress Phosphate limitation Pantoea sp. At-9b superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pantoea; 570.6341424 1222.0748 510.5607758 1123.48324 1017.5361 841.7885 755.7787 719.182 1314.2688 913.9015 139003137 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 1612.2786 1730.3243 1371.9459 1629.211 2178.5179 4203.6664 1009.5205 1513.1269 1569.813 1336.1764 1112.2653 209401886 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1427.7995 764.55522 1326.7286 883.8935 826.305 584.844 595.5577074 951.0774 929.3501 1692.4853 1030.8874 219721872 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Stenotrophomonas sp. SKA14 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas; 6632.04696 790.6373 798.9738 1171.7548 1053.2401 1153.1896 2169.6968 995.2496 883.3621 702.1687 941.9565635 2221.6743 110347324 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 1473.7245 1008.4586 1176.6951 1744.6263 842.0483847 1138.0838 1103.7112 962.3865 1070.8052 1416.7768 1320.5364 1095.6766 115384998 phospholipase_C_fungi Fungi function carbon degradation Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 4443.6592 9032.4711 16657.7723 6706.6232 5682.1159 6505.7011 7897.1256 15213.8117 8375.7716 9732.8673 9033.4191 18275.9982 225378063 obgE Stress Radiation stress Roseburia inulinivorans DSM 16841 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Roseburia;species:Roseburia inulinivorans; 2741.1692 3670.5822 3252.5847 2989.1424 4601.2897 3534.3503 2917.5212 4461.2475 3209.8062 3280.1781 4145.1811 4994.2904 66573474 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Xanthomonas campestris pv. campestris str. 8004 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas campestris; 9801.5473 7425.2016 4585.0413 8034.0641 9114.9295 5734.1062 8501.813 8039.9604 4847.7748 5226.1887 7613.589 9052.5289 160891311 CopA Metal Resistance Copper Bacteroides uniformis ATCC 8492 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides uniformis; 1566.8103 809.5174382 1000.7819 1474.57965 2176.9718 1185.899 918.4842 911.0149489 1285.44265 1322.44265 1186.527004 1477.0514 91978107 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 4398.2983 2726.6775 3197.5527 3589.0666 1719.9901 1885.943 2099.8775 2314.2643 2044.9125 3111.8997 2337.9062 2813.6484 216408351 cat_fun soil_benifit Gibberella moniliformis superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella; 544.1961 440.0186286 419.8392234 253.160056 310.5723921 378.6957059 74422036 AceA Carbon cycling Carbon degradation Others Nitrobacter winogradskyi Nb-255 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter winogradskyi; 3375.8453 2076.5141 2717.0954 3921.1083 3199.27 2760.4372 2134.5291 1974.2553 2082.8298 2484.535 4717.7354 3222.2544 27657632 chnC Organic Remediation Other Hydrocarbons Rhodococcus sp. Phi2 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 1137.0305 435.7964754 708.1209 697.3128 721.3268 864.9355 1050.9656 596.775 820.9797 477.3348347 116748519 silC Metal Resistance Silver Syntrophobacter fumaroxidans MPOB superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Syntrophobacterales;family:Syntrophobacteraceae;genus:Syntrophobacter;species:Syntrophobacter fumaroxidans; 3054.2895 3514.9829 3470.7206 3429.0932 3818.7917 3946.4409 3001.0015 2707.7379 2865.3937 3357.6621 4929.7766 3895.0433 297625426 pabA soil_benifit Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Propionibacteriaceae;genus:Propionibacterium;species:Propionibacterium freudenreichii; 6157.7613 6866.28135 9168.86135 9668.79515 6189.87125 6808.6108 6468.4284 5355.90455 6096.41255 6053.55005 6579.7983 20569.65055 162284235 xylA Carbon cycling Carbon degradation Hemicellulose Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 805.6423 428.5527349 468.2080925 453.9572 357.6795387 414.3645175 970.1135 2578377 AceB Carbon cycling Carbon degradation Others Mycobacterium leprae superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 2379.8404 1594.2593 2098.4694 2468.9926 912.1037464 732.9574347 1133.0635 1534.7007 1276.77 1787.3354 40962.61772 1495.1506 119857542 vdh Carbon cycling Carbon degradation Others Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 876.2425 1170.9261 1176.6515 902.256 1399.5945 1633.6242 885.1007 1167.7942 926.4133 714.635787 196110859 pilin virulence pilin Alteromonas macleodii 'Deep ecotype' superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Alteromonas;species:Alteromonas macleodii; 6893.455 6928.405775 5590.0251 5912.7969 13248.203 3652.882056 9901.2611 3235.247836 4210.489836 3694.190098 11135.9563 5085.1985 187484288 amyA Carbon cycling Carbon degradation Starch Exiguobacterium sp. AT1b superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;genus:Exiguobacterium; 2197.6582 2360.2908 1277.559685 1214.9979 3927.2592 2297.2559 1831.9903 1740.5944 2493.7228 2172.7119 46115742 pec_CDeg Fungi function carbon degradation Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 2826.8941 1770.285 2835.7086 3213.6585 1063.6679 2703.9622 2961.5095 3500.3135 1835.0802 3032.428 1446.6415 1911.7901 167946096 hrcA Stress Heat shock Endoriftia persephone 'Hot96_1+Hot96_2' superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;genus:Endoriftia;species:Endoriftia persephone; 13334.0803 5679.8666 8922.9405 13175.5259 7620.2924 6838.3588 9287.6039 11101.8209 10821.6988 9866.6525 7580.7714 8090.3308 55231410 glucoamylase Carbon cycling Carbon degradation Starch Haloarcula marismortui ATCC 43049 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloarcula;species:Haloarcula marismortui; 2473.2083 3329.4895 2777.3616 1880.1634 4087.3346 1959.9168 2695.9394 1813.9826 1855.6872 1830.9851 3324.2123 2066.9794 29466078 norB Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 4756.9406 3391.4948 3842.4807 6117.7666 3522.4732 5298.9081 5953.7593 8465.0988 4514.1376 4255.9918 3980.3002 4166.4495 88815516 AceA Carbon cycling Carbon degradation Others marine actinobacterium PHSC20C1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria; 2540.4302 3396.0694 2238.60825 2871.5491 3459.360306 3543.01 4166.85265 2377.497 2930.3948 2975.7583 2427.9024 2433.4065 228860993 T4_recomb_endonuclease Bacteria phage REPLICATION Enterobacteria phage RB51 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 1357.2262 553.2448998 1159.4818 774.9331 411.7585475 887.3158 557.3667 506.5770373 1495.6757 167346665 pstS Stress Phosphate limitation Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 473.437479 629.6479 659.5084 1015.7192 435.9386112 558.5781 514.2373 622.1166 162284383 AceA Carbon cycling Carbon degradation Others Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 2321.2622 1664.4708 2267.1565 3130.1858 1769.8347 2383.4041 1889.5594 1440.2632 2232.8565 2653.7626 3098.8856 1861.4198 224942062 sigma_70 Stress Sigma factors Eikenella corrodens ATCC 23834 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Eikenella;species:Eikenella corrodens; 719.3532 544.6054258 490.4620664 743.0896091 476.0845129 434.7999758 491.4555303 601.492 558.9596408 88184155 endochitinase Carbon cycling Carbon degradation Chitin Chaetomium globosum CBS 148.51 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Chaetomiaceae;genus:Chaetomium;species:Chaetomium globosum; 3907.2269 1437.7553 2870.9959 3531.4822 1942.0442 1979.7788 3161.3897 2066.2114 2021.405 2242.5246 2030.7997 2944.0645 255652773 amoA Nitrogen Nitrification Archaea superkingdom:Archaea; 3236.7538 510.4170649 1072.6651 2131.2801 1236.048 528.0727469 914.9342 981.3539 723.1543 1079.4383 3127.1385 643.2919 237785400 ureC Nitrogen Ammonification Corynebacterium kroppenstedtii DSM 44385 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium kroppenstedtii; 5760.9914 9991.5905 6964.7625 5457.7377 10195.6988 5701.2622 7359.2866 5333.9293 5867.7207 5490.0296 9145.2056 5660.6251 83317086 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 2033.5558 1778.0324 800.5295 2340.0578 1550.9469 1206.9425 921.0019 1571.183 1154.4445 1055.0508 3128.1715 1007.7621 260094207 ureC Nitrogen Ammonification Haemophilus influenzae NT127 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Haemophilus;species:Haemophilus influenzae; 3046.848 2995.6601 2654.6338 3898.6032 1618.0068 2269.2278 2080.7337 1718.3467 2738.6533 3062.075 2174.9954 2344.414 242918165 chitinase_Oomycetes soil_borne_pathogen oomycete carbon degradation Aphanomyces astaci superkingdom:Eukaryota;order:Saprolegniales;family:Saprolegniaceae;genus:Aphanomyces; 1467.7337 1859.9034 1588.1771 1678.5906 713.0100106 1394.6589 2392.0701 1379.822066 1425.2707 1404.2257 1874.5197 888.9773 197758002 AceA Carbon cycling Carbon degradation Others Streptomyces sp. Mg1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 3692.055 3228.7214 4182.5447 3084.3265 2853.2584 2907.5024 2769.1768 5753.3423 3142.9995 2953.8274 3793.6531 4192.3624 162568573 aoxB Metal Resistance Arsenic uncultured bacterium superkingdom:Bacteria; 5178.1237 4962.0147 4336.5034 4975.6259 28073.032 4429.2747 4908.2481 5441.6452 5119.2998 4907.1074 3118.1052 3915.8753 262279907 oxyR Stress Oxygen stress Acinetobacter calcoaceticus RUH2202 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter;species:Acinetobacter calcoaceticus; 714.0139 1232.9696 1093.6165 669.8021 721.6947 693.8072 1154.4899 1245.0092 878.3414 1088.7958 716.6058043 1167.8264 163739874 alkB Organic Remediation Other Hydrocarbons Phaeobacter gallaeciensis BS107 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 643.1152363 374.9378799 477.4055657 642.0167 442.487 753.6403801 431.7549071 563.2804 632.6883729 21646802 dsrB Sulphur sulfite reductase Chlorobium tepidum TLS superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobaculum;species:Chlorobaculum tepidum; 1595.6226 2365.8083 1782.381 2610.1182 1909.5855 2771.5497 3575.5108 1806.5627 2799.3093 2133.8303 1635.8833 1914.5091 88697132 replicase_Carmovirus soil_borne_pathogen replication Hibiscus chlorotic ringspot virus superkingdom:Viruses;family:Tombusviridae;genus:Carmovirus; 2528.6031 3129.7755 2668.8971 2412.8464 3720.7709 2800.5649 2655.2201 3025.5234 3326.9362 2933.0578 2236.5705 2718.3459 71018739 nitA Organic Remediation Aromatics Other aromatics Ustilago maydis 521 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Ustilaginomycetes;order:Ustilaginales;family:Ustilaginaceae;genus:Ustilago;species:Ustilago maydis; 1744.31145 2665.921 1869.74875 2029.23355 1794.89925 1633.49137 1126.3496 1501.877967 2028.4817 1931.1258 1231.1408 2498.01035 16126009 AceB Carbon cycling Carbon degradation Others Caulobacter crescentus CB15 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter;species:Caulobacter vibrioides; 3913.4595 4527.5446 4108.1317 4884.8661 1925.3788 5448.2317 5862.2384 4455.2801 4360.558 4134.8804 3984.961 2771.9569 159883959 amyA Carbon cycling Carbon degradation Starch Schizosaccharomyces pombe superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Schizosaccharomycetes;order:Schizosaccharomycetales;family:Schizosaccharomycetaceae;genus:Schizosaccharomyces; 6396.0167 4438.232 5849.6858 7175.0238 2991.8147 6852.7318 8482.1989 8382.4145 4411.9182 8360.6111 4332.4048 4095.8789 192359172 cda Carbon cycling Carbon degradation Starch Cellvibrio japonicus Ueda107 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Cellvibrio;species:Cellvibrio japonicus; 527.6072 1001.3482 870.3627 712.8603 756.3528 657.8374 554.1382 1262.4514 657.2446 758.8049 1051.5088 885.6266 260215365 obgE Stress Radiation stress Cronobacter turicensis z3032 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Cronobacter;species:Cronobacter turicensis; 513.7719 461.4218179 423.536596 525.5603 718.4716 555.2182106 494.86 476.2789 425.2781175 445.7535 741.7115126 578.9558 75992425 flnB Organic Remediation Aromatics Polycyclic aromatics Terrabacter sp. DBF63 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Intrasporangiaceae;genus:Terrabacter; 1221.1704 1641.394 2111.3805 1877.7252 1110.7065 2050.193 2246.3523 957.8837 1874.5235 2103.8596 1494.0661 1412.0013 238795928 nrfA Nitrogen Dissimilatory N reduction Yersinia mollaretii ATCC 43969 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia mollaretii; 3735.3741 2532.9269 2904.5967 3314.1161 3414.7451 2369.0461 2020.148 1982.9582 2268.1644 2598.9353 4095.7865 3483.5672 161784875 sped_bac soil_benifit Gluconacetobacter diazotrophicus PAl 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter;species:Gluconacetobacter diazotrophicus; 1162.3101 646.6602693 1048.2168 779.7805 836.3326 624.7208 558.6575 979.5696 125862066 rubisco Carbon cycling Carbon fixation Methanoculleus marisnigri JR1 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanomicrobiales;family:Methanomicrobiaceae;genus:Methanoculleus;species:Methanoculleus marisnigri; 3983.3209 2676.2552 2547.1579 4275.4221 1304.5298 2414.244 1921.2861 2084.973 2717.8133 2708.4893 2048.8903 2244.1541 147885988 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured bacterium superkingdom:Bacteria; 822.4461 882.8552 802.2452 709.7236 1784.0544 1010.9105 776.7065 1303.1339 608.2376 1101.9276 692.9175476 1159.6556 210629900 CopA Metal Resistance Copper Collinsella stercoris DSM 13279 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Coriobacteriales;family:Coriobacteriaceae;genus:Collinsella;species:Collinsella stercoris; 912.0799 1070.0561 1098.7635 677.5744459 793.0191112 594.5080913 634.3954 1751.6456 976.2275 766.5544 1257.2315 865.0418 3387795 pcpE Organic Remediation Herbicides related compound Rhodococcus opacus superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 3787.2497 3028.9054 3392.0329 3784.6672 4651.0206 3111.6407 2489.59 2517.8945 2873.6062 3285.4598 6518.6918 3945.9904 86284648 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Rhizobium etli CFN 42 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 996.0317 1142.2809 971.8483 567.6939 1183.7576 667.3496 506.2614 948.9265 1265.2259 795.911 761.9531 167074361 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Rhizobium leguminosarum bv. trifolii WSM1325 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 1575.6488 2365.5662 1986.6753 2076.9831 1659.4523 2309.9987 1825.762 1578.3971 1960.085 1731.827 2567.9899 1742.5434 254463115 pstA Stress Phosphate limitation Rhodobacterales bacterium HTCC2083 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 1130.2875 771.9076927 1067.062981 1300.9428 1358.4191 1329.359075 942.8766 1561.9295 42406461 SilA Metal Resistance Silver Yersinia enterocolitica superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia; 7723.354288 5245.1925 5690.2167 8769.4431 3741.1145 7716.4126 8122.3779 9197.262 7320.0285 9168.4702 6095.3782 7128.5308 119896456 phoB Stress Phosphate limitation Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 2554.6886 4010.8849 2655.2881 2640.0472 4971.6263 2605.505 5196.7472 1926.867 3090.4046 2437.4238 2686.4071 1434.4811 302681663 chitin_synthase Fungi function major biomolecule Schizophyllum commune H4-8 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Schizophyllaceae;genus:Schizophyllum;species:Schizophyllum commune; 1973.0164 2932.0875 2132.579 2380.9723 711.2278174 2967.3126 2532.0183 2292.1135 2891.068 2827.2222 1105.4681 2411.7986 213928212 vanA Carbon cycling Carbon degradation Others Pseudomonas syringae pv. tomato T1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 3729.4773 2892.4963 4588.5599 2816.6905 2501.8434 3573.8648 3528.5976 4578.8042 4295.3472 3857.1932 3214.2517 4181.2118 118443212 TerD Metal Resistance Tellurium Clostridium novyi NT superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium novyi; 816.27395 807.14535 817.0609 1052.6 1028.6401 965.4284 655.4088 781.4881 778.37025 863.9203 1299.8752 828.4314 134100403 pimF Organic Remediation Aromatics Aromatic carboxylic acid Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 4545.9327 5086.9555 4982.1001 6124.3004 7741.0836 5444.7469 8071.3813 2768.2955 5161.6903 4471.7276 4584.0625 3632.6319 163800766 SMR_antibiotics Antibiotic resistance transporter Vibrio campbellii AND4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 4748.8141 6493.7463 3953.4218 4719.6466 9974.915 5240.2346 5883.3206 4220.203 5607.4951 5713.3586 6276.9562 3886.337 1146303 major_capsid_protein Bacteria phage STRUCTURAL Lactococcus phage c2 superkingdom:Viruses;order:Caudovirales;family:Siphoviridae;genus:c2-like viruses; 392.1313149 498.3741 463.9579857 422.4223027 649.6737 455.8928 496.8958 474.986611 90305607 ZntA Metal Resistance Zinc Coccidioides immitis RS superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Coccidioides;species:Coccidioides immitis; 4590.6891 2601.8259 3866.4709 4119.7224 4251.9982 2453.5641 2900.7288 2841.478 2525.8622 2607.9243 6135.5474 2918.0554 85707382 nreB Metal Resistance Nickel Roseovarius sp. 217 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 5196.0693 2272.5583 1863.773 4281.3806 2745.3976 3362.3679 5279.5737 2844.032 2488.4458 2882.619 2745.1953 3272.8993 152964803 ureC Nitrogen Ammonification Kineococcus radiotolerans SRS30216 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Kineosporiaceae;genus:Kineococcus;species:Kineococcus radiotolerans; 6316.1348 7849.7878 6528.418 5323.8718 8526.653 6536.6905 7389.3845 4406.863 6892.2796 5587.4457 6622.5982 6199.9906 220715072 tfdA Organic Remediation Aromatics Chlorinated aromatics Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 996.8511 2892.3179 2026.3972 1828.5237 2268.8876 2720.3394 2414.7811 2106.3129 2602.6985 2938.641 915.6737 3212.7379 160365479 iro virulence Iron oxidation Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 2393.9712 2328.6637 2752.47 1824.1542 1157.0625 2779.6261 2102.7336 2860.1065 2916.8937 2291.4448 1351.0956 2651.7714 24496479 cellobiase Carbon cycling Carbon degradation Cellulose Fervidobacterium sp. YNP superkingdom:Bacteria;phylum:Thermotogae;class:Thermotogae;order:Thermotogales;family:Thermotogaceae;genus:Fervidobacterium; 464.7306 658.2549 460.1762191 401.8984741 1002.9567 659.0386 523.9633 346.8642287 56180216 pstB Stress Phosphate limitation Idiomarina loihiensis L2TR superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Idiomarinaceae;genus:Idiomarina;species:Idiomarina loihiensis; 429.164372 421.4865502 596.8413555 658.6341574 423.4245601 529.4558 927.638 196477390 pstA Stress Phosphate limitation Phenylobacterium zucineum HLK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Phenylobacterium;species:Phenylobacterium zucineum; 5065.1984 4695.9247 4069.951 4553.3586 7071.4138 4869.0494 4111.4572 4580.9951 9941.2838 4821.3491 3404.5746 4672.0608 50121922 cydA Stress Oxygen limitation Pectobacterium atrosepticum SCRI1043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium atrosepticum; 4367.9816 8152.7378 7286.0416 5669.5699 6883.1267 8555.8193 6134.4957 8112.7071 8444.71 7982.6156 3246.3245 9520.0056 196221990 sigma_24 Stress Sigma factors Chthoniobacter flavus Ellin428 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Spartobacteria;genus:Chthoniobacter;species:Chthoniobacter flavus; 4062.061 1578.1272 2930.317 2702.0696 3066.5153 1486.7597 1707.1484 1970.5877 2012.7615 1795.2078 3569.4314 2105.7733 310791961 tre_fun soil_benifit Glomerella graminicola M1.001 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Glomerellaceae;genus:Glomerella;species:Glomerella graminicola; 1235.8116 1491.37595 1449.26685 1047.8949 2188.7077 1478.11495 1241.34245 3718.459118 1163.50155 1513.461152 1537.4305 1785.6791 91690259 pimF Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 4110.1083 7577.5644 8518.4956 3778.5307 3516.9749 7777.6586 6558.0797 7211.2172 8121.2307 7242.9388 1909.9079 8796.3795 46139515 ABC_multidrug_fungi Fungi function metal resistance Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 1707.9972 1540.027 2699.3137 821.3173 1084.4854 1158.8431 1147.5848 1819.4537 1180.177 1757.4652 1624.3446 262046150 nplT Carbon cycling Carbon degradation Starch Lactobacillus crispatus MV-3A-US superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus crispatus; 770.0243126 1232.1414 826.4415947 462.5497293 879.3306 1701.1829 779.4653 858.1305 803.751665 85858341 ZntA Metal Resistance Zinc Syntrophus aciditrophicus SB superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Syntrophobacterales;family:Syntrophaceae;genus:Syntrophus;species:Syntrophus aciditrophicus; 1473.7379 1072.783 1362.1753 1160.8378 2113.4194 1370.325 797.112 1034.9274 1100.7429 1018.0564 1811.311 1455.6289 27382714 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 1932.1285 1509.1136 2414.6451 2164.9623 874.7361 2064.1472 2682.2554 1986.2385 5158.2888 2127.5548 1314.8185 1624.8252 254390209 oxyR Stress Oxygen stress Streptomyces clavuligerus ATCC 27064 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces clavuligerus; 4062.9341 2236.242 3527.8026 3847.3745 2444.3581 3288.6634 3874.9411 4251.1416 3064.0663 3500.9723 2301.3408 3043.4043 218261736 tutFDG Organic Remediation Aromatics BTEX and related aromatics Parabacteroides johnsonii DSM 18315 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Porphyromonadaceae;genus:Parabacteroides;species:Parabacteroides johnsonii; 670.2045 1494.1793 768.31 605.9648 1304.5867 1192.3601 1291.9147 510.3161 1227.3785 1154.0302 693.7584086 1126.0251 91691628 MFS_antibiotic Antibiotic resistance transporter Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 2624.3216 2407.8587 2542.9851 4219.3171 1137.172001 3550.189 3241.5437 3137.153 2913.7834 3862.1846 2205.9151 2030.1629 148259399 capsular_polysaccharide_biosynthesis_protein_EPS Bioleaching EPS Acidiphilium cryptum JF-5 3685.1911 3387.9524 4503.2422 3948.2979 2669.1993 3988.2138 4681.906 3465.5864 3573.7306 3608.8402 3274.145 3297.4527 257447599 pilin virulence pilin Enhydrobacter aerosaccus SK60 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Enhydrobacter;species:Enhydrobacter aerosaccus; 1157.179 1326.6529 1298.6349 911.5366 1054.6277 1153.1479 595.7876899 887.4276 1463.7429 1084.883 220711428 tfdA Organic Remediation Aromatics Chlorinated aromatics Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 3375.8184 4919.3399 3633.8536 2821.4984 5751.2045 4613.5561 3659.037 3944.504 4240.3293 4369.9007 2605.3241 3696.7482 87135756 grpE Stress Heat shock Novosphingobium aromaticivorans DSM 12444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium;species:Novosphingobium aromaticivorans; 3723.2985 2960.2145 2570.4793 5695.2939 2935.6755 2752.5851 3238.6647 3041.961 4056.381 2138.7324 2297.7851 2665.2703 90202433 limEH Carbon cycling Carbon degradation Others Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 2197.7253 1106.1557 867.7601 1970.567 1397.9814 1417.4224 2549.8431 940.0904 2661.4092 1291.7126 1516.3128 1126.5469 86740690 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Frankia sp. CcI3 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 1736.3931 1441.8711 1570.8169 1714.9849 2179.209 1347.1876 1402.4265 2565.3674 1586.259 1482.8933 2026.2831 1611.7657 27380808 alkK Organic Remediation Others Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 2275.3774 825.4118 752.6219 1407.3933 1136.2577 821.578 1056.8725 667.1229 832.9725 1528.7816 912.0202 149173228 per_bac soil_benifit Planctomyces maris DSM 8797 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Planctomyces;species:Planctomyces maris; 649.0352 562.648929 694.9002 619.3473 638.5091681 544.3655 618.6285783 622.2616 1015.568 1072.2904 242782805 AceB Carbon cycling Carbon degradation Others Talaromyces stipitatus ATCC 10500 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus; 2019.8683 3051.2049 2276.6653 2435.7761 1670.9418 2838.4791 3744.7655 1927.7022 2290.4721 2301.9971 2419.9503 2331.1486 39933539 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 791.619 489.6211629 512.3500904 45185954 AceB Carbon cycling Carbon degradation Others Ashbya gossypii ATCC 10895 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Eremothecium;species:Eremothecium gossypii; 1001.5658 1395.9597 872.5 1086.86895 1402.9772 942.8294 963.97515 670.8188 1172.3024 1074.74285 827.9117817 974.9967 237625907 fnr Stress Oxygen stress Thauera sp. MZ1T superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Thauera; 1612.2115 1486.6739 1337.371 1651.9626 1617.1915 1149.2112 2905.661 893.2469 1138.998 1261.2728 1491.2552 1021.3709 254980893 pstB Stress Phosphate limitation Nitrosomonas sp. AL212 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosomonas; 2248.0561 2557.4563 2918.3074 1548.4641 3307.2635 2726.1424 2028.0968 3304.8537 2641.5943 2346.6405 2911.3975 3033.4209 86749031 vanA Carbon cycling Carbon degradation Others Rhodopseudomonas palustris HaA2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1248.6529 465.6778419 563.1015732 1006.0969 1060.2926 1962.6231 659.4010318 260649702 iro virulence Iron oxidation Streptomyces scabiei 87.22 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces scabiei; 1011.941381 1556.6433 1040.3002 1271.2399 2011.9797 1537.4923 1611.3042 1757.6662 1731.6629 242793014 calcineurin_A_fungi Fungi function virulence Talaromyces stipitatus ATCC 10500 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus; 508.1736 511.1688775 574.5732647 1287.6558 717.5279 503.2333 1054.1369 911.1914 632.4007 84786792 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Erythrobacter litoralis HTCC2594 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter;species:Erythrobacter litoralis; 2015.8386 2550.5881 1915.3882 1596.515 2670.1283 2140.2298 2387.0805 953.4899 1961.3547 1778.4358 1973.405 1767.9849 118002510 nagG Organic Remediation Aromatics Aromatic carboxylic acid Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 630.4753717 688.9152236 674.2733474 1052.479903 825.8502587 682.7079 905.8096 972.3856 730.3250436 6460538 CadA Metal Resistance Cadmium Deinococcus radiodurans R1 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus radiodurans; 7205.958601 5914.60995 8781.195 5981.4968 6756.5623 6519.996411 5067.055126 10722.98614 9393.895975 8330.47845 7398.363925 7378.91955 194308531 GcdB Organic Remediation Aromatics Aromatic carboxylic acid Pelodictyon phaeoclathratiforme BU-1 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Pelodictyon;species:Pelodictyon phaeoclathratiforme; 593.2811262 1098.4592 957.0471 873.3953 2401.498609 803.7418 865.3223 863.4192 1089.4993 1039.256198 1036.4765 35213074 gyrB other category gyrB Gloeobacter violaceus PCC 7421 superkingdom:Bacteria;phylum:Cyanobacteria;class:Gloeobacteria;order:Gloeobacterales;genus:Gloeobacter;species:Gloeobacter violaceus; 513.5599823 729.8681 343.5197107 928.8132 489.0731 705.1684 628.5706 605.059581 221156740 pstC Stress Phosphate limitation Thermomicrobium roseum DSM 5159 superkingdom:Bacteria;phylum:Chloroflexi;class:Thermomicrobia;order:Thermomicrobiales;family:Thermomicrobiaceae;genus:Thermomicrobium;species:Thermomicrobium roseum; 1052.6085 2505.5814 1479.5381 1194.0817 2237.1316 1567.3493 1105.7253 2654.4082 2276.7832 2132.3179 124261284 xylJ Organic Remediation Aromatics BTEX and related aromatics Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 3132.1028 2394.3602 1815.4729 3409.2318 2490.809 2029.329 1996.0605 1917.5589 1853.2526 2452.8781 3155.944 2695.0833 255340511 fnr Stress Oxygen stress Flavobacteriaceae bacterium 3519-10 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae; 996.4481 570.1732 11593.25554 448.9994317 670.5036 651.6648 383.0091342 260575751 glnA Stress Nitrogen limitation Rhodobacter sp. SW2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter; 1510.5962 1915.4099 1647.3383 1781.1987 2528.6901 1692.8424 1522.0533 1102.8082 1660.9985 1903.8573 2386.2197 1828.2425 238601814 phenol_oxidase Carbon cycling Carbon degradation Lignin Moniliophthora perniciosa FA553 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Marasmiaceae;genus:Moniliophthora;species:Moniliophthora perniciosa; 1366.3467 1425.0382 1719.8757 757.9251 726.2058244 911.1371 1237.7523 1901.6417 1164.3578 1632.3674 1671.9134 119471439 sped_bac soil_benifit Alteromonadales bacterium TW-7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales; 3123.1972 2501.6057 5158.3187 2271.0359 2106.4802 2380.6372 2511.154 5694.685 2629.9804 2633.797 3835.8643 4677.6773 183981987 limEH Carbon cycling Carbon degradation Others Mycobacterium marinum M superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium marinum; 4775.2488 7659.2441 5742.9805 5947.6023 3472.0598 8238.7759 7595.1374 6165.9285 10395.5108 7143.7026 2946.7858 6437.2581 212558181 alkK Organic Remediation Others Shewanella piezotolerans WP3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella piezotolerans; 501.8335191 738.5394 738.7949 397.9946854 832.8166 541.8548652 546.69975 881.0579 556.31245 556.84295 574.4791 89512860 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 1704.8003 3386.2321 2217.1262 2082.4758 2330.1459 3004.8528 2911.0405 1538.7677 3239.2314 3793.9687 1218.647895 3347.5483 145568829 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Pseudomonas stutzeri A1501 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas stutzeri; 1663.6975 807.483 1301.6038 1923.2421 647.3183572 587.1395472 1030.6425 889.5128 926.2347 71841657 nirS Nitrogen Denitrification Pseudomonas stutzeri superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 6441.5388 6584.5498 4338.2626 4735.6453 4461.8423 5799.854 7193.9662 3730.7063 3622.295 8006.4672 3820.4405 5353.1304 53757669 CopA Metal Resistance Copper Methylococcus capsulatus str. Bath superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae;genus:Methylococcus;species:Methylococcus capsulatus; 1466.78 1743.653 2285.8107 1435.4595 1841.4449 1510.6449 1668.4593 2533.8358 1742.413 1785.2138 1853.4741 2051.2009 119669551 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Azoarcus sp. BH72 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 6020.8526 7010.801 6889.6079 6313.9289 8994.3279 6098.0674 7092.1679 6104.8141 6309.3202 5497.5446 7100.1352 7164.3173 134142983 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 1677.5193 1753.6177 2209.4638 1764.2686 12546.74143 1516.4779 1583.419 2899.7964 1828.6151 2322.052 1621.1562 2080.3684 261192378 cat_fun soil_benifit Ajellomyces dermatitidis SLH14081 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces dermatitidis; 5474.5477 2981.3629 2660.1588 4406.4116 3316.2503 3444.4929 4922.5744 5348.0913 3751.2487 3561.3046 4563.5455 3651.6512 170727563 pcc Carbon cycling Carbon fixation Shewanella woodyi ATCC 51908 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella woodyi; 546.9125687 423.7547307 507.1098316 594.9931 363.2257486 576.9639 452.0728681 334.0555653 481.7541 377.8443032 72160601 grpE Stress Heat shock Thermobifida fusca YX superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiopsaceae;genus:Thermobifida;species:Thermobifida fusca; 3172.7355 2806.9683 2455.8645 2230.9159 3967.4914 3060.1313 2363.1307 2694.6289 3413.4878 2813.4651 1429.1996 2330.9426 258561542 fnr Stress Oxygen stress Corynebacterium genitalium ATCC 33030 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium genitalium; 1053.401 2151.9882 1066.2386 1532.9448 1222.3023 2694.5398 3006.8284 932.5132 1961.9022 1611.7207 2297.6891 1195.7031 39937203 fnr Stress Oxygen stress Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 826.8519 564.2792753 603.0712 321.9733345 577.7199 219858510 amyA Carbon cycling Carbon degradation Starch Arthrobacter chlorophenolicus A6 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter chlorophenolicus; 2683.5312 1980.5626 3536.8898 2756.1886 3539.1007 3092.1078 1339.9864 3453.4095 2897.8011 2889.7543 4567.4135 3603.1897 217506813 sigma_32 Stress Sigma factors Thauera sp. MZ1T superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Thauera; 4694.9506 4013.0129 2726.1972 6539.2532 2854.2822 6002.2575 3081.1899 3290.4375 3523.8265 5534.2599 3766.5773 3700.9366 171690630 ferroxidase_high_affinity Fungi function iron Podospora anserina superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Lasiosphaeriaceae;genus:Podospora;species:Podospora anserina; 2929.2214 3797.0011 2779.4408 4260.1357 3007.1719 3288.3194 3106.2638 2297.173 3316.6502 4060.3332 2248.0062 2464.6133 67900830 glucoamylase_fungi Fungi function carbon degradation Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 1230.2641 1927.4771 938.1458 738.0911 1316.68057 1068.7614 1225.4103 873.3886098 867.2983 1074.2236 2222.0115 805.0425015 56550639 cnrA Metal Resistance "Cobalt,Nickel" Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 8318.568 4047.2777 6713.9419 7231.8548 5296.4979 5175.7431 3749.5142 4840.0749 5676.4801 6457.6248 6709.9276 6241.6271 210071367 Catechol Organic Remediation Aromatics Other aromatics Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 960.5301 993.1675 1144.8117 660.0428 508.5880288 552.5718 542.7829884 259022600 Tet Antibiotic resistance other Rhodobacter sp. SW2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter; 2482.8124 3570.8972 2708.0228 3091.9149 3482.3358 3498.7842 3632.7014 1891.5952 3774.9194 4217.2553 1777.9408 3049.7349 146404231 rubisco Carbon cycling Carbon fixation Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2503.2698 936.0299 1494.7609 2269.2142 951.8824 1279.0169 1985.5652 2284.4515 1643.63 1681.6673 1242.6677 82795280 type_III_secretion virulence secretion Pseudomonas syringae pv. tagetis superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 7; 1341.1746 1146.4477 1110.5695 1152.3317 1370.5659 909.9705 999.0454 1354.8433 1016.6959 1171.7291 860.8256 1379.2634 46307842 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1533.6057 413.7900277 708.102 1408.2288 837.7271 565.4972 436.5694754 777.4937 644.8968 705.0385 1442.7976 604.6470112 157960168 cytochrome Energy process Energy process Shewanella pealeana ATCC 700345 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella pealeana; 1204.5816 1813.7881 1717.3023 1215.2855 1114.0434 1870.1791 1546.0146 2186.8184 1855.5707 1666.3246 1897.1651 21111990 ppx Phosphorus Phosphorus utilization Xanthomonas campestris pv. campestris str. ATCC 33913 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas campestris; 6916.4779 11128.4685 10494.1645 6887.9374 4116.2479 11584.4077 9783.0604 12352.0954 14203.5481 9500.9848 3178.5831 13430.4566 189185136 ppx Phosphorus Phosphorus utilization Methylacidiphilum infernorum V4 superkingdom:Bacteria;phylum:Verrucomicrobia;order:Methylacidiphilales;family:Methylacidiphilaceae;genus:Methylacidiphilum;species:Methylacidiphilum infernorum; 800.0948 1316.1403 1317.1029 622.7169 1174.3157 981.2521 1189.4626 686.167 729.2001 835.4961 1163.92 963.1045 94549626 sigma_24 Stress Sigma factors Candidatus Koribacter versatilis Ellin345 superkingdom:Bacteria;phylum:Acidobacteria;genus:Candidatus Koribacter;species:Candidatus Koribacter versatilis; 811.3242 662.2561 562.0401873 1099.676 721.2938 533.4353 738.5775 475.6796 916.4283 124265537 alkK Organic Remediation Others Methylibium petroleiphilum PM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Methylibium;species:Methylibium petroleiphilum; 3295.6679 3550.3945 3141.663 3380.919 1873.0315 3949.6715 3442.915 3184.4162 4137.0498 3813.4207 2559.4852 3351.7367 116812183 nifH Nitrogen Nitrogen fixation Clostridium sp. Kas107-2 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium; 723.3829333 622.44068 719.82085 721.39385 958.67945 782.97262 556.52685 700.25335 629.36174 601.11902 1373.36645 1071.667883 217987270 ChrA Metal Resistance Chromium Bacteroides eggerthii DSM 20697 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides eggerthii; 1263.6434 1212.5816 1322.5552 1323.222 2271.542 1369.7417 1241.4629 912.178 16028.71839 939.5339 1813.5214 118435745 TerC Metal Resistance Tellurium Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 3074.8812 3055.257 4629.0814 2281.4871 3298.9402 3776.6123 2786.8294 4450.7168 2957.9795 3009.9165 2771.2861 3805.0415 123441449 MFS_antibiotic Antibiotic resistance transporter Yersinia enterocolitica subsp. enterocolitica 8081 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia enterocolitica; 2234.3552 3742.1954 2617.4418 2210.7394 2246.0414 3573.7003 3407.3573 2945.1148 3598.9039 4119.6717 2429.9925 3433.1558 18558988 nirS Nitrogen Denitrification uncultured temperate forest soil bacterium superkingdom:Bacteria; 2051.7028 3722.6483 3742.3473 2329.9353 1271.8246 3519.4987 3948.8897 4284.9367 4330.6785 3723.2516 2003.9642 4150.2316 142850872 CorC Metal Resistance Cobalt Aeromonas salmonicida subsp. salmonicida A449 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Aeromonadales;family:Aeromonadaceae;genus:Aeromonas;species:Aeromonas salmonicida; 6096.4227 6992.2733 6661.4834 7030.5149 1794.6338 6999.3184 6442.3336 3079.3269 6494.9227 6932.411 6020.0611 3941.5823 41396510 linB Organic Remediation Pesticides related compound Mycobacterium avium subsp. paratuberculosis K-10 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium avium; 3520.706006 3418.766008 3956.483178 2642.0197 2704.7105 5142.5252 3467.40395 4121.079707 3657.603821 3648.9389 2326.7108 6152.5453 94311121 pstA Stress Phosphate limitation Ralstonia metallidurans CH34 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus metallidurans; 6908.1096 5393.3885 5187.6448 7987.4651 2887.7648 6539.1134 8436.903 7320.7367 5034.6936 8254.9765 4339.7323 2923.3973 146323424 endochitinase_fungi Fungi function carbon degradation Aspergillus fumigatus Af293 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Neosartorya;species:Aspergillus fumigatus; 9776.8588 7312.3536 9932.0098 7649.9307 5313.4478 8438.203 6950.9694 8128.2974 13606.0508 8455.0793 8756.5115 7317.8861 221564459 sigma_24 Stress Sigma factors Geobacter sp. FRC-32 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 1325.19015 1415.67035 1675.9156 1184.0962 2234.15375 1344.3534 1607.4549 1195.5269 1288.5995 1291.3329 1686.32295 1598.5072 115373684 atzA Organic Remediation Herbicides related compound Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 1635.5971 3001.4324 2093.3951 1849.7822 1917.1882 3077.6451 2138.3028 1899.463 2807.1956 2789.3903 1599.3179 3224.2318 167588518 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia ubonensis Bu superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ubonensis; 2850.3335 2137.895 2216.3119 2782.3919 2024.0063 1721.05 1528.7061 1832.2358 1607.0756 1745.9079 3209.9993 2629.6624 241213555 B_lactamase_C Antibiotic resistance Beta-lactamases Asticcacaulis excentricus CB 48 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Asticcacaulis;species:Asticcacaulis excentricus; 459.4409446 461.8423232 18328.8649 1206.2436 784.2424 524.9127 488.2418 667.5546889 212538145 alpha_galactosidase_fungi Fungi function carbon degradation Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 1324.6797 1025.5081 1158.7243 1430.9667 1581.358 936.3384 854.5205 1217.3872 716.1999 1055.8213 1387.6851 1289.7422 226226488 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Gemmatimonas aurantiaca T-27 superkingdom:Bacteria;phylum:Gemmatimonadetes;class:Gemmatimonadetes;order:Gemmatimonadales;family:Gemmatimonadaceae;genus:Gemmatimonas;species:Gemmatimonas aurantiaca; 1780.3167 1392.1815 1638.3965 2126.5955 1079.7266 2003.19285 1792.9801 2034.9945 1668.79165 1670.10445 1958.1734 1278.4885 112462547 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 906.7390224 939.1708 18126.44718 526.1063063 584.3732978 439.7926495 669.372669 471.6084646 187981323 amyA Carbon cycling Carbon degradation Starch Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 801.1828 616.7524 610.9657158 894.0511 903.2117397 507.208878 656.0741 429.4377534 704.7723 811.1867 993.3213 691.0392 219994748 arsM Metal Resistance Arsenic Thioalkalivibrio sp. HL-EbGR7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Thioalkalivibrio;species:Thioalkalivibrio sulfidophilus; 773.7675 1478.1492 1170.3268 1031.4784 1103.0262 1229.4363 559.0752285 1195.6002 1420.4505 1128.6068 83835964 phdCI Organic Remediation Aromatics Polycyclic aromatics Roseovarius nubinhibens ISM superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius;species:Roseovarius nubinhibens; 884.6511 835.2618 762.6251 1062.6266 626.0427726 658.6151 742.6169 875.151 488.6215 974.2697 827.374 262199445 phzF soil_benifit Haliangium ochraceum DSM 14365 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Haliangiaceae;genus:Haliangium;species:Haliangium ochraceum; 3239.6552 2589.5166 2503.3941 1840.6871 2475.6793 2042.2811 1925.943 5176.6463 2237.3413 2149.7984 3049.4669 2594.4389 16080780 narH Stress Oxygen limitation Bacillus subtilis subsp. subtilis str. 168 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus subtilis; 4047.8228 5377.868 5227.5412 3579.5879 4459.7188 2803.3916 3893.0297 2667.4791 3183.2116 2693.571 4713.8194 3035.9202 161395076 phn Organic Remediation Herbicides related compound Roseobacter litoralis Och 149 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter litoralis; 519.5105243 832.8363 1322.888 816.4431 220936380 pilin virulence pilin Thioalkalivibrio sp. HL-EbGR7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Thioalkalivibrio;species:Thioalkalivibrio sulfidophilus; 2227.604873 1978.401315 3302.109686 1066.4117 3870.9684 2363.599653 2306.5369 2425.195182 2677.022541 4281.668044 3385.0907 2948.510732 56677530 phn Organic Remediation Herbicides related compound Silicibacter pomeroyi DSS-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria pomeroyi; 5825.8425 5173.0187 5479.0597 5194.663 6891.8481 6208.2055 5252.1255 5882.0712 6442.3045 6019.6766 5042.2357 5948.771 6459661 hly virulence hemolysin Deinococcus radiodurans R1 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus radiodurans; 883.9123 1400.6999 1544.7331 915.7891 900.5211 719.7714 885.8916 1966.9927 1166.874 1163.5105 1322.4103 1622.2435 91691223 nmoA Organic Remediation Aromatics Nitoaromatics Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 2424.2476 4167.6311 2998.2455 1810.5525 4313.92 2877.2757 3002.0339 2184.9543 2744.4312 2178.485 3196.9059 2160.6615 192803395 amyA Carbon cycling Carbon degradation Starch Geobacillus sp. Y412MC10 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Paenibacillaceae;genus:Paenibacillus; 3163.1448 2066.2181 2148.5434 2681.7425 2113.173 1145.2329 1883.2279 1853.5515 1922.0628 1626.0919 2324.7648 2566.2601 30089160 nirK Nitrogen Denitrification nitrifying Haloferax denitrificans superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloferax; 3538.2149 3537.9577 3331.0107 4034.332 5216.1854 3897.9276 2304.862 2921.7051 3271.9765 3020.3794 6637.9259 4298.4448 109632247 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 1436.5439 3218.2088 1975.5381 2135.9783 2660.1176 2299.4545 2333.0558 1448.7483 2487.3741 2938.1497 1559.004421 2161.7738 261857098 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1800.5995 724.3888 1294.17415 1246.890667 999.0727 2119.5154 1781.061458 1843.56545 1325.3228 1400.40675 1043.676725 1209.6551 146192307 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2089.6491 3074.2434 2276.0111 1538.369 4170.9272 2259.0725 2479.8173 2839.3476 2277.6816 3299.6858 2919.4698 28974730 dsrB Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 771.887 853.0121 1460.5786 465.098759 595.021 823.0921 1205.295 916.3519 672.0304 31789.41644 824.8335 74419659 sir Sulphur sulfite reductase Nitrobacter winogradskyi Nb-255 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter winogradskyi; 1685.9951 503.5615531 1261.6929 1841.3994 929.2637 1020.0487 1362.2042 801.2907 875.9767 1157.1122 737.0747646 1419.8012 209551445 obgE Stress Radiation stress Rhizobium leguminosarum bv. trifolii WSM2304 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 668.8344 683.3194297 639.8322 568.8078 237686134 obgE Stress Radiation stress Teredinibacter turnerae T7901 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;genus:Teredinibacter;species:Teredinibacter turnerae; 429.1509396 1083.1554 521.2585267 18401.70306 1024.2799 538.6067905 743.4351 893.517 779.0911 110822354 limEH Carbon cycling Carbon degradation Others Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 2789.5255 1727.6484 1853.7408 2302.5265 1920.8095 1086.6641 1146.5984 1373.5081 1255.8485 1437.5464 3393.1389 1415.352 217385841 CODH Carbon cycling Carbon fixation Burkholderia sp. DNBP20 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 573.2937526 1325.5252 606.2767164 1171.7959 894.1507 1009.75135 818.18855 827.62965 1080.2408 1349.11925 1280.1227 156741894 sigma_24 Stress Sigma factors Roseiflexus castenholzii DSM 13941 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus;species:Roseiflexus castenholzii; 2735.44938 2903.4167 2832.001 2339.2154 2287.4964 2887.41605 2620.0638 3882.90535 2925.875 3404.9408 4323.9001 3216.28765 81176591 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1138.8439 2532.1751 1899.3221 1883.985 1292.8318 2539.3982 2257.6161 2076.3548 2583.3963 2882.3286 2631.0631 260172800 mannanase Carbon cycling Carbon degradation Hemicellulose Bacteroides sp. D2 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides; 861.5207 898.0975318 1210.9647 902.119 1747.3677 984.1387 1120.1021 1016.8124 918.6861 1539.3524 863.5175 1591434 ChrA Metal Resistance Chromium Methanocaldococcus jannaschii DSM 2661 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanococci;order:Methanococcales;family:Methanocaldococcaceae;genus:Methanocaldococcus;species:Methanocaldococcus jannaschii; 2122.6656 1986.8574 2262.344 2115.4594 2989.786 2263.1855 1530.8739 1694.9371 1681.5007 1520.2339 3268.8116 2186.7529 124601072 linB Organic Remediation Pesticides related compound Mycobacterium tuberculosis C superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium tuberculosis; 1990.8008 1337.4713 1415.7388 2036.4932 1316.7587 1781.3836 1634.083 1790.6456 1232.0614 1912.3327 2022.7515 1864.0839 254403560 ara Carbon cycling Carbon degradation Hemicellulose Streptomyces sviceus ATCC 29083 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces sviceus; 1994.0245 1060.3335 1707.7498 1953.7054 735.9333 899.4712 1212.3572 1424.2492 1499.9986 1465.9427 704.5214299 1629.8513 117999992 phtA Organic Remediation Aromatics Aromatic carboxylic acid Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 1827.1148 1826.5434 3099.9637 1765.4192 3279.9807 1695.6093 1632.7296 1999.7953 1476.5027 1794.6941 2359.3602 2825.7328 194350507 sigma_24 Stress Sigma factors Stenotrophomonas maltophilia R551-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Stenotrophomonas;species:Stenotrophomonas maltophilia; 772.7063 637.113 157847988 sigma_24 Stress Sigma factors Shewanella pealeana ATCC 700345 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella pealeana; 2010.9627 1967.5015 2128.2463 2015.1525 2618.0654 2543.6907 1716.0493 3191.0615 2436.643 2568.5067 2086.2245 2280.9843 156742299 nplT Carbon cycling Carbon degradation Starch Roseiflexus castenholzii DSM 13941 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus;species:Roseiflexus castenholzii; 2051.3804 522.088 1022.4166 1276.1984 729.0592 906.7903 791.7284 707.0322 832.7491 2067.149 713.3955 118051719 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 528.1609736 446.3650754 1247.7689 148554676 nahA Organic Remediation Aromatics Polycyclic aromatics Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 5830.897567 5277.618067 5354.882867 6027.0647 4471.404233 6218.944133 5004.120067 4144.2003 5901.995733 5495.1364 8141.4576 5287.1739 67541162 xylanase Carbon cycling Carbon degradation Hemicellulose Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 489.7175172 768.4544516 1875.6809 620.3051804 952.3754 572.422 597.3465 1442.5388 783.6356 974.5296 1807.7538 5738785 pnbA Organic Remediation Aromatics Nitoaromatics Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 5275.7765 5195.3309 1973.9387 5865.3076 3524.2364 2878.7115 2773.501 2509.0099 3071.5333 3308.3063 8431.9631 2759.1035 78498745 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Thiomicrospira denitrificans ATCC 33889 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Helicobacteraceae;genus:Sulfurimonas;species:Sulfurimonas denitrificans; 1398.9066 2295.7115 1885.1315 1710.0127 1830.7328 2278.7849 2479.7485 1954.8158 2683.9033 1796.6706 1698.5154 2500.3174 110647724 atzA Organic Remediation Herbicides related compound Alcanivorax borkumensis SK2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax;species:Alcanivorax borkumensis; 2412.5346 3154.0628 2941.9341 3304.6922 4140.8953 3469.5298 2284.6514 2137.1788 3174.1721 2913.2597 3667.8843 3808.1313 149817293 TehB Metal Resistance Tellurium Plesiocystis pacifica SIR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Nannocystaceae;genus:Plesiocystis;species:Plesiocystis pacifica; 2491.4091 1974.0639 3054.397 3294.8163 2117.7991 2917.6925 4051.7547 3441.5836 2468.7474 2295.0404 2821.5936 2548.7376 77920228 sped_bac soil_benifit Pelobacter carbinolicus DSM 2380 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter carbinolicus; 3873.2835 6234.2952 4525.6039 4167.8418 7380.132 5067.8933 9494.9397 3072.7543 7075.1912 5264.4115 5763.5985 4246.9485 161329303 pilin virulence pilin Shewanella benthica KT99 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella benthica; 2789.18295 2523.40185 2858.3102 2880.3429 3364.5023 2738.085 2157.1713 2025.9708 2290.7342 2485.7801 4431.5303 2587.64825 118618643 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium ulcerans Agy99 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium ulcerans; 5735.6178 7706.4043 9343.3642 6111.7123 6578.5228 6890.6011 6573.2319 10606.2599 7452.873 8385.222 6717.4233 9021.0956 187602736 amyA Carbon cycling Carbon degradation Starch Chloroflexus sp. Y-400-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus; 662.1892084 16925.90186 840.0796766 787.457 1534.7554 993.6808 816.8981 860.5095927 615.2717106 757.7664 1000.504517 923.7476 170694972 phtA Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 5956.6731 7121.5083 5881.1201 5207.4702 7092.9329 5757.0042 4055.5169 4059.9909 5074.8941 4569.032 5928.8877 4559.7165 149925595 pimF Organic Remediation Aromatics Aromatic carboxylic acid Limnobacter sp. MED105 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Limnobacter; 586.6153 573.2934 712.7843 441.2604112 15614923 glnA Stress Nitrogen limitation Bacillus halodurans C-125 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus halodurans; 604.5205 24557.03018 445.6309789 428.529928 162707982 Catechol Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 1150.6509 935.9662 549.6943 1584.0366 838.1632 737.689 773.6324 573.9725 840.4125 951.1358 778.0847588 500.1029923 118741278 phn Organic Remediation Herbicides related compound Enterobacter sp. 638 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter; 2275.8879 2785.5353 2731.9403 1952.8013 2268.2809 2162.9784 2505.763 2534.6589 3503.7554 2249.6934 2235.4413 2529.2377 282951445 pabA soil_benifit Citrobacter rodentium ICC168 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter;species:Citrobacter rodentium; 1750.8462 7914.892886 1717.2031 896.9818432 1528.6028 737.1784785 740.0663987 1045.8608 76802762 alkK Organic Remediation Others Natronomonas pharaonis DSM 2160 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Natronomonas;species:Natronomonas pharaonis; 1027.7722 1733.0512 1179.1668 741.7895 2316.6467 1307.1197 1064.678 1697.8905 1634.3341 1744.6349 1006.8231 1188.6996 198262255 mer Metal Resistance Mercury gamma proteobacterium HTCC5015 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 6232.277 4837.80035 4375.78905 5502.17935 4638.593963 4356.12355 3889.2101 3929.9244 5072.5177 4298.4187 6395.817317 4256.649867 149927332 iro virulence Iron oxidation Limnobacter sp. MED105 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Limnobacter; 3174.6294 2899.1862 2834.9671 3147.7186 4347.4974 3566.8054 2142.9597 2545.8553 2430.8418 2700.0922 5331.3478 3477.0856 71279079 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Colwellia psychrerythraea 34H superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Colwelliaceae;genus:Colwellia;species:Colwellia psychrerythraea; 1671.7569 1208.2873 1868.7019 1549.4366 1085.1111 1516.2535 1198.937 1241.6805 1174.271 1460.8173 3253.0514 1531.3491 118720004 pbrA Metal Resistance Lead Burkholderia multivorans ATCC 17616 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 3037.9155 2967.2824 2221.3717 2778.3649 3905.7781 2978.9336 2478.2115 2958.962 2627.5224 2791.9251 2764.363 206684605 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Rhodobacterales bacterium Y4I superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales; 773.2974 805.41235 1764.8755 868.834 1079.5939 874.5689 866.7822 2280.7597 704.73735 929.13795 1283.6586 1704.5003 89145072 ppk Phosphorus Phosphorus utilization Microbacterium esteraromaticum superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Microbacteriaceae;genus:Microbacterium; 1493.0133 1794.2282 954.8402105 1067.1194 3116.3662 1319.9672 1543.9538 2228.0092 1291.1798 1651.5291 1108.1348 1017.975584 206687185 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rhodobacterales bacterium Y4I superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales; 3764.7237 4007.8522 2855.382535 2429.14281 3929.5154 3896.1878 2946.9194 5301.0904 4786.9091 3849.1198 4406.4246 4946.1722 68549269 CopA Metal Resistance Copper Pelodictyon phaeoclathratiforme BU-1 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Pelodictyon;species:Pelodictyon phaeoclathratiforme; 1172.4381 1258.0088 1560.3921 753.6926 906.2894358 1042.4084 912.3419 2381.3462 936.0969 1049.7468 1475.3269 911.6082 71164188 sigma_24 Stress Sigma factors Xylella fastidiosa Dixon superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xylella;species:Xylella fastidiosa; 7228.2415 14861.3619 13616.5627 8329.8347 12857.7124 8537.1389 8043.2563 12283.3673 9996.2319 10543.3282 11247.7187 10760.7644 55232995 pimF Organic Remediation Aromatics Aromatic carboxylic acid Haloarcula marismortui ATCC 43049 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloarcula;species:Haloarcula marismortui; 5494.6021 8118.4476 5912.9907 5533.2795 8854.179 6496.5179 5241.6302 5049.7451 6558.9686 5551.2664 6844.7777 4961.8546 289194523 per_fun soil_benifit Marasmius scorodonius superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Marasmiaceae;genus:Marasmius; 1555.1377 512.5056 957.018 1436.3088 691.4543 581.1964 865.0076 591.4631 683.9674 1616.1591 634.4323753 260612783 pilin virulence pilin Vibrio metschnikovii CIP 69.14 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio metschnikovii; 1756.2729 646.107767 1827.3868 800.6977097 739.2295 1048.9064 1255.5157 608.587 891.8978 1033.5652 254462656 glnA Stress Nitrogen limitation Rhodobacterales bacterium HTCC2083 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 1971.512 720.8846 717.2474 1385.5868 932.392 573.1848 866.4381 1111.8137 597.6137 1061.4157 1690.9957 863.2704 89068644 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola granulosus; 8799.0278 3881.4715 5519.4214 7075.9907 6451.911 4718.2452 5307.7905 5068.6641 4755.2356 6008.5883 5998.6312 5864.729 29466010 norB Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 698.3854 481.1844 617.0558 878.9291 782.1188 444.8565702 15304.01539 405.1058 531.972 699.7679 1028.3972 741.7116 157679463 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2268.5001 2025.1106 2607.933 2178.5091 3046.987 2457.6322 1812.1124 2577.2296 1787.5992 2153.8965 3291.8271 2588.6026 224606289 pstB Stress Phosphate limitation Natrialba magadii ATCC 43099 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Natrialba;species:Natrialba magadii; 3497.206066 2045.987996 2360.89985 2943.1187 2570.7803 2118.176244 1996.72 2438.8657 2353.753859 2286.510541 5487.1954 1918.848958 188481029 amoA Nitrogen Nitrification Archaea superkingdom:Archaea;phylum:Crenarchaeota; 423.5630717 859.9019259 862.2607 988.3863 1083.6612 1009.8929 974.5966 609.2610648 63255746 tfdA Organic Remediation Aromatics Chlorinated aromatics Pseudomonas syringae pv. syringae B728a superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae; 672.5455693 744.0895269 1118.6884 708.2101 1299.9324 592.9068571 539.1228377 532.4943609 169804747 ppx Phosphorus Phosphorus utilization Leuconostoc citreum KM20 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Leuconostocaceae;genus:Leuconostoc;species:Leuconostoc citreum; 511.0183 612.0504 545.2848 702.6202032 330.4418055 439.0459 791.9995 632.3114 799.274457 189340555 CopA Metal Resistance Copper Chlorobium limicola DSM 245 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium limicola; 444.3404 56910187 glnA Stress Nitrogen limitation Bacillus clausii KSM-K16 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus clausii; 1095.1352 1099.3385 1218.9178 1218.1346 1516.6301 895.5975 795.185 1173.945 787.2002 793.7559 1631.7751 1203.3245 224579028 rubisco Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 997.0123 839.1992 962.6303 1441.0618 1222.5867 998.0032 962.1686 545.1401 1102.0127 1304.5986 1176.0764 987.4795 169759881 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1041.8358 1253.5489 1118.2609 860.232 1868.6897 1051.2775 1033.4446 1242.8909 1245.0733 1274.0919 1274.7327 193224764 pcc Carbon cycling Carbon fixation Cupriavidus taiwanensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus; 3270.9524 3746.2603 4982.0129 3086.1482 2530.1879 4759.6741 3583.5744 4002.5803 5427.3792 4296.9503 1870.20725 5129.9934 73539682 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 1491.7238 798.7926 1286.9373 1487.5083 650.6236726 1548.0105 801.436 847.5533 1045.269 1781.937 114799478 ArsC Metal Resistance Arsenic Hyphomonas neptunium ATCC 15444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Hyphomonas;species:Hyphomonas neptunium; 1063.3141 996.557 1591.8992 820.6598 665.5733354 1438.9594 1159.3074 1673.7627 1125.5668 977.1872 1359.7772 227290160 glucoamylase_fungi Fungi function carbon degradation Amorphotheca resinae superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;family:Myxotrichaceae;genus:Amorphotheca; 2674.5853 2341.8013 2700.7967 2406.7099 3006.7928 2730.375 1950.5466 2031.3995 2121.9353 2178.2281 4713.2428 2736.9532 221635505 pimF Organic Remediation Aromatics Aromatic carboxylic acid Thermomicrobium roseum DSM 5159 superkingdom:Bacteria;phylum:Chloroflexi;class:Thermomicrobia;order:Thermomicrobiales;family:Thermomicrobiaceae;genus:Thermomicrobium;species:Thermomicrobium roseum; 4395.773 3002.5665 5055.6263 4923.2877 4380.7903 3330.5559 3448.4092 2638.9614 3643.3446 3828.1716 4841.0777 5024.735 165909652 amyA Carbon cycling Carbon degradation Starch Bacillus amyloliquefaciens superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus; 2409.5191 2410.70035 2772.42545 1907.87345 1723.2891 2721.663 2004.97285 2605.8986 2047.88305 2028.25155 2459.06235 2277.64735 108757793 sigma_24 Stress Sigma factors Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 750.6908 426.2650203 747.2859 838.1379 816.3772183 670.1613 583.7543 504.9688313 407.1757237 371.9096858 958.3653661 593.3041293 171678100 ABC_multidrug_fungi Fungi function metal resistance Podospora anserina S mat+ superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Lasiosphaeriaceae;genus:Podospora;species:Podospora anserina; 615.4813 397.1227239 749.3215 695.1083 802.4609434 569.0526757 551.8914455 610.6848 496.6175 519.9099 695.516 146343609 sox Sulphur Sulphur oxidation Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2541.0145 6054.1154 5075.0656 4272.9155 4624.9891 6059.7345 5251.6323 4330.4003 5892.7775 6721.1195 3031.1842 6363.2819 87286724 fnr Stress Oxygen stress Blastopirellula marina DSM 3645 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Blastopirellula;species:Blastopirellula marina; 2014.3342 1628.5623 1312.9737 2535.6858 1062.680115 1151.7837 1133.0635 1467.0136 1266.9383 1302.9013 2622.838 1096.290905 66801995 narG Nitrogen Denitrification unidentified bacterium superkingdom:Bacteria; 1028.605 1470.4781 1445.3121 745.2823 1632.1885 1419.4866 831.1928826 1137.9496 757.3868 1440.7795 766.0041 221728672 gyrB other category gyrB Diaphorobacter sp. TPSY superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax ebreus; 1957.2738 1818.3372 1768.932 2271.4879 2565.2062 1790.5219 2190.9282 1455.1514 1723.8678 2527.805 1812.1999 1191.1302 170135699 fnr Stress Oxygen stress Burkholderia ambifaria IOP40-10 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ambifaria; 1442.5078 813.4592 1200.8161 1452.3623 533.4719273 740.9079 937.4517 1575.1925 1195.8597 675.4756871 1016.647 154350635 TerD Metal Resistance Tellurium Bacillus amyloliquefaciens FZB42 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus amyloliquefaciens; 5036.1712 3938.9532 4774.9852 5738.4137 3737.4553 3329.4791 3247.7491 4191.9396 3934.603 3883.5907 4571.5217 3734.3337 134267544 pstB Stress Phosphate limitation Geobacillus thermodenitrificans NG80-2 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus;species:Geobacillus thermodenitrificans; 471.2211372 755.4424 477.0275379 548.6124428 690.801 491.718474 530.966 388.2346089 432.1193 867.5137 255020521 sigma_38 Stress Sigma factors Acidithiobacillus caldus ATCC 51756 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus;species:Acidithiobacillus caldus; 882.0587 1705.9733 859.967 1163.591 2138.7115 1114.4528 2061.8767 784.72 1374.6793 902.9638 124389565 rubisco Carbon cycling Carbon fixation Ectothiorhodosinus mongolicum superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Ectothiorhodosinus; 1302.7985 919.0293408 1322.7289 1216.7239 1710.8533 1728.5143 912.1467 1306.1284 597.0530479 15613869 katE Stress Oxygen stress Bacillus halodurans C-125 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus halodurans; 468.0510968 468.7360628 391.3103033 539.3220082 496.6946846 395.414191 465.0245113 586.9433 514.0687439 190688148 amyA Carbon cycling Carbon degradation Starch Cellvibrio japonicus Ueda107 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Cellvibrio;species:Cellvibrio japonicus; 1453.9387 9935.361061 1066.0642 978.2361 1427.4634 1316.4076 877.1398 1546.6234 987.7599 925.0175 1003.9033 220908248 ChrA Metal Resistance Chromium Cyanothece sp. PCC 7425 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 369.5246283 608.1385 427.2005583 504.1374 738.56742 547.9236 444.7581 793.4835 551.1927 577.8526 677.0372862 211638240 SMR_antibiotics Antibiotic resistance transporter Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Photorhabdus;species:Photorhabdus asymbiotica; 876.726 584.3877824 886.1614 627.6738 639.1771 792.3043 520.6327845 148520147 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 1754.3789 5316.0157 2656.3931 3258.1207 2938.4436 3362.8166 5483.4418 2263.7653 3848.1795 2462.2356 74076.10994 2688.9724 261196816 amyA_fungi Fungi function carbon degradation Ajellomyces dermatitidis SLH14081 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces dermatitidis; 4090.242 3154.102476 3461.237605 3796.8991 4960.0989 5501.4013 2597.491455 3279.579979 2752.711282 3232.083436 5671.5122 3827.007319 87199914 pimF Organic Remediation Aromatics Aromatic carboxylic acid Novosphingobium aromaticivorans DSM 12444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium;species:Novosphingobium aromaticivorans; 3057.087593 3325.776979 3620.990724 3337.438019 4082.198923 3623.844635 4113.905393 3630.121649 3375.688741 3179.154477 8082.4772 4290.438198 83017273 gyrB other category gyrB Microbulbifer sp. MBIC08258 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Microbulbifer; 598.4391581 870.5077 988.1907 630.2495685 1305.1744 609.0006282 959.2322 613.9199903 728.0003 632.1104 1121.973 970.6573 157376435 phoB Stress Phosphate limitation Shewanella sediminis HAW-EB3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella sediminis; 2008.2628 2787.778 2437.0795 1579.9547 1899.2146 1451.2984 2150.1974 2563.1644 1981.321 1970.1525 1761.4599 2484.4016 170746555 obgE Stress Radiation stress Methylobacterium radiotolerans JCM 2831 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium radiotolerans; 6562.8996 12701.435 12379.9358 5596.8498 3855.2888 12172.1001 8642.8472 12028.3222 12781.1314 9052.9868 2510.475 12488.9485 29160349 exoglucanase Carbon cycling Carbon degradation Cellulose Exidia glandulosa superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Auriculariales;family:Exidiaceae;genus:Exidia; 3835.2701 3603.7985 1600.5066 3667.6082 5208.6205 1895.6048 4969.8202 1574.2212 2250.3066 2722.2129 2980.3482 2316.5511 254442506 sir Sulphur sulfite reductase Verrucomicrobiae bacterium DG1235 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales; 1490.0447 940.6554 1388.7236 603.3920613 1761.827 669.8783514 619.537 751.5579 813.8333654 964.0521 268162373 endochitinase Carbon cycling Carbon degradation Chitin Photobacterium damselae subsp. damselae CIP 102761 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Photobacterium;species:Photobacterium damselae; 1563.8149 1805.6201 1132.5968 1683.4258 901.6776 2110.8706 1615.3636 1072.3417 1862.3155 1810.1708 1019.7964 1739.5041 56550986 linC Organic Remediation Pesticides related compound Zymomonas mobilis subsp. mobilis ZM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Zymomonas;species:Zymomonas mobilis; 1859.218 795.1354 1017.0661 1380.464 1124.6797 1086.335 1467.3977 1477.7622 1023.9532 1331.4763 1179.2957 992.7939 291197098 exoglucanase_fungi Fungi function carbon degradation uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 906.2771 920.8408 1037.3778 11775.87226 1334.0498 901.6398 560.2977 675.4789 686.0408 671.4498 1709.3986 835.3662 154161105 CopA Metal Resistance Copper Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 1725.2711 1064.4366 835.1481 1508.2984 1776.8498 1385.6103 1303.6831 981.1844 1395.927 1404.0359 1412.3344 1504.42 148500415 vanA Carbon cycling Carbon degradation Others Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 1817.0809 1260.9078 1888.3271 1086.11406 1361.5307 949.5399 1438.738 924.5528 1227.9968 1848.9335 1587.0475 90103683 TehB Metal Resistance Tellurium Rhodopseudomonas palustris BisB18 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1479.769 948.3137 944.3348 761.2998635 609.9025 585.3487 823.3205 788.5514 544.6771 988.7564866 78170118 ureC Nitrogen Ammonification Synechococcus sp. CC9902 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 906.4651 365.6230488 927.7937 1020.1506 587.3789 506.005009 611.9661 811.1185854 579.7366144 61744010 tre_fun soil_benifit Metarhizium acridum superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Clavicipitaceae;genus:Metarhizium; 2038.9421 1863.55875 2928.9212 2545.548 2713.2991 2982.3436 2122.1068 2499.7502 1429.098957 2850.7499 2205.0982 3153.3317 167887767 mer Metal Resistance Mercury Pseudomonas aeruginosa superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1250.4126 1657.3477 1438.2605 1300.6348 3103.9604 1666.1604 1940.6708 1676.6475 2059.9397 2557.4408 984.9846243 1474.9641 91687429 PhaB Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 3979.8554 4544.1736 7546.4874 5337.583 6439.7579 4758.8216 5451.7533 3221.6732 4414.8187 5919.2679 7107.0062 5364.7617 90023084 Arylest Organic Remediation Aromatics Other aromatics Saccharophagus degradans 2-40 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Saccharophagus;species:Saccharophagus degradans; 2066.4515 1832.7872 2184.7758 1892.6144 2962.8256 2074.0333 1449.4353 1473.4168 1648.01 1699.0535 3729.123 2606.1388 218682538 nitA Organic Remediation Aromatics Other aromatics Rhizobium etli CIAT 894 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 2736.376214 5096.238388 3689.631859 3234.480728 4829.7616 3925.52571 3279.914432 2899.281789 4191.915662 4048.925788 3735.72975 4503.343816 226322915 cda Carbon cycling Carbon degradation Starch Coprococcus comes ATCC 27758 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Coprococcus;species:Coprococcus comes; 462.4900936 559.3472 486.8372 959.6681 454.1523 608.156 370.8712062 182412403 sigma_24 Stress Sigma factors Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 1483.436 855.6633 1555.4498 733.2572 633.3803 713.3351 868.3513 262199603 fnr Stress Oxygen stress Haliangium ochraceum DSM 14365 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Haliangiaceae;genus:Haliangium;species:Haliangium ochraceum; 3490.8526 2931.0043 2685.1086 3952.2701 4104.5499 2837.0134 3899.5792 2671.7034 2976.8158 3170.6687 4199.0442 3517.5685 134293320 iro virulence Iron oxidation Burkholderia vietnamiensis G4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia vietnamiensis; 1531.1207 2077.2531 2281.4343 1249.68 880.3086607 2091.0685 1448.403 1902.2227 2122.1799 2171.1598 1137.3488 2133.1006 71851624 ChrA Metal Resistance Chromium Mycoplasma hyopneumoniae J superkingdom:Bacteria;phylum:Tenericutes;class:Mollicutes;order:Mycoplasmatales;family:Mycoplasmataceae;genus:Mycoplasma;species:Mycoplasma hyopneumoniae; 707.4522 540.4350327 761.8441284 71739992 CopA Metal Resistance Copper Pelobacter propionicus DSM 2379 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter propionicus; 1313.498193 1928.968 2426.9746 1341.111 1922.1177 2005.1746 1781.3034 1936.2842 2059.8581 1820.6784 1647.991543 2274.6537 211957737 sigma_32 Stress Sigma factors Pseudovibrio sp. JE062 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pseudovibrio; 1105.9079 626.8318 765.2713 1015.2468 676.6524 666.7529 548.7714 599.6039373 113729438 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 8599.5985 10104.7954 12915.1342 10367.5196 5375.8815 12529.4058 9584.7516 10037.8553 13727.4444 12508.4335 7931.1222 11667.9509 254473604 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Pseudovibrio sp. JE062 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pseudovibrio; 3710.438298 7613.2563 8203.0178 4104.272252 4145.3697 4751.495618 5650.799477 7526.9087 4601.578426 3888.609107 5161.2056 2917.736642 78187104 pstB Stress Phosphate limitation Chlorobium luteolum DSM 273 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Pelodictyon;species:Pelodictyon luteolum; 3663.2091 4559.342228 3838.851086 3588.300962 3064.77105 4380.761868 5045.169875 4087.637 4270.120566 6271.015253 4042.04345 4392.58593 50123096 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium atrosepticum; 913.9604 971.811 519.0451 786.6339753 967.6568 461.2036732 628.947 504.278884 464.5246 531.2438 1000.408418 653.1769682 223585846 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 4476.6086 2241.2116 3387.6856 4238.4388 1954.9746 3177.8223 5183.3729 2837.762 2889.5769 2607.9131 3592.1107 3907.4025 226319780 phoB Stress Phosphate limitation Deinococcus deserti VCD115 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus deserti; 2336.754134 5712.3601 5312.1028 4951.5868 3731.6537 5968.6656 3184.212337 2691.079102 3700.285398 3602.295822 4576.9272 6105.3472 283786592 papC soil_borne_pathogen adherence Citrobacter rodentium ICC168 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter;species:Citrobacter rodentium; 728.5006 685.275 648.208 391.8817864 559.2309 792.0552 499.2268 542.7788 507.0652696 197788007 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 4128.927 5161.3848 2595.6035 4631.5304 2564.6753 6029.433 4546.9129 2744.4259 3866.6081 4234.1837 1963.5068 4877.9499 226303935 cat_bac soil_benifit Rhodococcus erythropolis PR4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus erythropolis; 704.3091 2235.8916 2448.9001 1450.8966 2260.6781 2027.8707 1903.8341 1687.1964 1514.7267 1786.85525 841.2934845 1786.290167 260861571 ppk Phosphorus Phosphorus utilization Selenomonas sputigena ATCC 35185 superkingdom:Bacteria;phylum:Firmicutes;class:Negativicutes;order:Selenomonadales;family:Veillonellaceae;genus:Selenomonas;species:Selenomonas sputigena; 3298.0857 4600.9035 3939.4445 3686.4697 6917.0643 3444.5228 5038.114 3355.3286 3349.2439 2779.4186 4471.5793 3660.7969 146401332 NADH_ubiquinone_oxidoreductase Bioleaching Electron transport Acidiphilium cryptum JF-5 29630.8956 60477.9853 38532.6755 36081.6502 64034.2137 42320.028 52056.7717 39240.0664 45482.5575 35735.5121 39781.8604 27074.3276 150274861 pstB Stress Phosphate limitation Bacteroides capillosus ATCC 29799 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;genus:Pseudoflavonifractor;species:Pseudoflavonifractor capillosus; 712.3819 1101.89335 883.8408 836.9462 1138.1978 1057.7535 1240.918 651.9881377 961.6663 840.4149 741.7355372 580.9725217 148838276 phn Organic Remediation Herbicides related compound Vibrio shilonii AK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio shilonii; 2029.8082 564.4697 1233.2682 1315.5377 870.9442 875.7953 844.8281 715.6893 912.3913 1011.4347 1161.2052 1110.5213 333775 coat_Dianthovirus soil_borne_pathogen structural Red clover necrotic mosaic virus superkingdom:Viruses;family:Tombusviridae;genus:Dianthovirus; 4923.0847 7255.6789 6022.4439 5690.8833 14946.1242 6548.4013 11570.4086 4731.0396 7190.0264 5814.9956 6459.0146 3924.0598 94972219 CadA Metal Resistance Cadmium Deinococcus geothermalis DSM 11300 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus geothermalis; 1095.82695 1825.1417 1491.5186 1421.98115 1607.10505 1849.0384 1425.2274 1385.3703 1648.1556 1741.6088 2499.2795 1947.78945 145316761 AceB Carbon cycling Carbon degradation Others Enterobacter sp. 638 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter; 1436.1678 980.0299 885.382 1280.3624 1485.3469 949.3354 1271.4518 624.8104 1008.6348 895.3371 1083.894 1686.0028 90418213 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Aurantimonas;species:Aurantimonas manganoxydans; 2522.0213 3729.2617 2556.943 3056.0959 4752.7953 2564.8389 4911.2303 1735.6437 3366.4145 2663.6672 3053.7433 1799.5968 196173236 nrfA Nitrogen Dissimilatory N reduction Anaeromyxobacter sp. K superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter; 1991.0426 1600.1973 2196.4801 1846.9332 4029.7924 1512.1405 2995.9776 1688.8244 1500.5344 1590.1359 1638.4059 1865.4434 227977788 sigma_24 Stress Sigma factors Tsukamurella paurometabola DSM 20162 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Tsukamurellaceae;genus:Tsukamurella;species:Tsukamurella paurometabola; 1301.7777 1385.4088 788.738 1090.323 1100.6579 773.255 778.9546 1404.483 834.1454 827.9252 1681.9625 1065.2457 156600886 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 754.0800838 747.7331 756.7472 919.4079 565.184 569.2186649 591.4514 683.945 56696533 inv virulence invasion Ruegeria pomeroyi DSS-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria pomeroyi; 5898.6456 2977.5147 4273.5038 6284.7121 4694.5327 3626.2567 3560.3013 4353.0232 3140.3552 3992.3072 6835.6243 5658.7575 151302230 AprA Sulphur adenylylsulfate reductase sulfate-reducing bacterium JHA1 superkingdom:Bacteria; 912.36195 1557.301667 1072.4906 1450.43775 25343.7737 1453.9456 1990.918 1244.1437 1775.50755 1298.9317 1407.0009 1417.6041 119189687 sulfate_transporter Fungi function Sulfur Coccidioides immitis RS superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Coccidioides;species:Coccidioides immitis; 595.709 787.6046 660.1508 670.7815 689.4066 616.5684544 630.6216 458.9214 665.6319 573.989 529.7424563 577.9122 83943682 sox Sulphur Sulphur oxidation Sulfitobacter sp. EE-36 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sulfitobacter; 842.5408 2024.499 1396.474 1029.1772 2285.6858 1223.1402 1294.1399 1203.2736 1272.2619 1666.8383 1000.913 1701.1221 119373243 oxyR Stress Oxygen stress Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 3948.7596 4831.7603 4406.5691 5113.5874 3569.2274 5215.7362 6886.2888 3866.0925 4378.2877 4635.3049 4785.1725 4571.1281 57224293 grpE Stress Heat shock Dehalococcoides ethenogenes 195 superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides;species:Dehalococcoides ethenogenes; 1379.2014 982.4 1658.6936 706.7775251 1236.0859 1406.9829 1037.0692 1340.8629 1293.8008 1306.3964 1742.5525 1672.9159 85672677 fnr Stress Oxygen stress Roseovarius sp. 217 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseovarius; 5678.8932 7895.6313 5908.5125 8169.3134 8413.1233 6250.0383 8097.6825 5464.958 6781.0089 5087.8141 8555.2814 7260.842 146398928 TehB Metal Resistance Tellurium Geobacter uraniumreducens Rf4 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter uraniireducens; 820.0733408 2111.4796 932.3330135 898.391913 1213.673593 871.646077 3165.5993 1508.9916 1140.5077 1378.123198 92115334 mer Metal Resistance Mercury Chromohalobacter salexigens DSM 3043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Halomonadaceae;genus:Chromohalobacter;species:Chromohalobacter salexigens; 1086.6191 1424.1589 1119.4386 1402.243 967.6568 1737.1429 3631.6691 1478.7306 2108.3177 1255.4663 1133.2405 1260.1764 86742738 glnA Stress Nitrogen limitation Frankia sp. CcI3 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia; 3604.6779 4968.8957 3843.9637 5317.8038 4442.2761 4929.8019 4461.1271 3804.6149 4790.264 4589.9021 4640.5684 5161.8662 226355519 pilin virulence pilin Deinococcus deserti VCD115 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus deserti; 6022.3302 2513.8513 3868.1865 5211.5658 3031.851964 2892.1273 1992.269046 2017.690492 2410.5144 3179.0547 7095.066 2601.406188 197790855 mer Metal Resistance Mercury Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 897.2909 356.3771579 735.0086489 161505242 phn Organic Remediation Herbicides related compound "Salmonella enterica subsp. arizonae serovar 62:z4,z23:--" superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 2756.7104 2813.416 3535.7266 3068.9989 785.9865 4184.4702 4444.0135 2180.4879 3244.7297 3806.3188 2338.7471 1975.1786 111148744 fnr Stress Oxygen stress Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 1037.422596 1696.6203 1150.713 808.332 1131.5329 1125.4358 850.7495 1943.4703 74053798 cumA Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 1399.1887 1266.8521 1656.818 1295.7996 1291.969 1893.012 1800.4742 1127.6986 1454.2626 935.887 198253384 hrcA Stress Heat shock Octadecabacter antarcticus 307 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Octadecabacter;species:Octadecabacter antarcticus; 1344.5461 1517.8677 1829.2708 1170.1796 790.5354164 2093.1175 2191.6049 2368.3462 1836.6878 1394.1536 1383.1908 148238483 gyrB other category gyrB Synechococcus sp. WH 7803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 3237.009 2043.5108 2911.2267 3010.0996 2619.1082 2634.2809 1957.8646 11227.1485 2347.016 2565.3056 3422.5931 3390.8464 88786855 clpC Stress Protein stress Synechococcus sp. WH 7805 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 526.8684 577.9755154 489.8258815 74053701 todC Organic Remediation Aromatics BTEX and related aromatics Sphingomonas sp. 1XXyl1b superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas; 4724.918 2958.3881 3999.6768 5171.5005 5613.6531 3322.1704 4383.7834 2751.0227 3152.8079 3253.7806 4681.0258 3387.0288 169832016 obgE Stress Radiation stress Candidatus Desulforudis audaxviator MP104C superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Candidatus Desulforudis;species:Candidatus Desulforudis audaxviator; 2141.4037 1757.9629 1021.3698 1330.2762 1760.0706 1698.9745 825.7876 1327.5119 1808.6372 1175.7676 1188.3049 1042.1205 91684214 nagG Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1576.3204 726.0874 1159.1941 460.9045497 597.9315 721.0878 476.6148291 782.7234 1225.1587 1195.4009 302689573 AceA_fungi Fungi function carbon degradation Schizophyllum commune H4-8 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Schizophyllaceae;genus:Schizophyllum;species:Schizophyllum commune; 1589.2154 1253.8037 1339.8718 1766.8711 1507.1693 1248.8201 1631.6284 2327.7605 1244.9917 1550.227 2091.0534 2539.482 227342779 sigma_32 Stress Sigma factors Rhizobium sp. NGR234 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium; 4656.8163 3823.1616 4347.6697 4461.7496 2452.4538 4943.113 4694.3283 3143.8911 5168.0739 4880.6764 4101.9127 2675.1714 114227902 alkH Organic Remediation Other Hydrocarbons Alkalilimnicola ehrlichei MLHE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Alkalilimnicola;species:Alkalilimnicola ehrlichii; 922.8713044 1425.0127 1457.2199 1378.1686 1339.4104 1123.6694 1256.454639 1188.5293 1178.0939 1040.771206 6010396 endolysin_transglycosylase Bacteria phage LYSIS Enterobacteria phage Mu superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:Mu-like viruses; 1350.92645 1620.7766 1484.80135 1508.2824 1620.4525 1462.4109 1454.91235 1211.17775 1157.5199 1224.4682 2238.3963 1365.0847 41406443 linB Organic Remediation Pesticides related compound Mycobacterium avium subsp. paratuberculosis K-10 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium avium; 10161.8553 11163.9311 14644.4025 5277.9851 4162.8694 11414.7735 9189.4532 12710.515 14760.9497 10093.8339 3104.5554 13022.4273 116672197 phzF soil_benifit Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 13897.0145 12618.8442 19450.7057 15325.9346 13304.7593 13913.0419 11902.8445 16064.37295 13641.01515 13330.91505 16483.809 14757.9696 163670215 hly virulence hemolysin Chloroflexus aurantiacus J-10-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aurantiacus; 730.8244 1073.9935 1424.2153 765.8286 617.3972395 1187.7087 1095.0168 1218.7913 1239.7381 1399.8484 1395.0556 15806334 pcc Carbon cycling Carbon fixation Deinococcus radiodurans R1 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus radiodurans; 3245.9281 1928.2035 2482.7626 3476.5688 1587.5578 2026.1881 2238.4264 2440.0277 1985.3049 2474.3959 1511.9884 2267.7463 238497984 lactase_fungi Fungi function carbon degradation Aspergillus flavus NRRL3357 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus flavus; 630.9455049 956.6728 637.4422054 686.6158 1288.8503 603.7809219 821.8303 940.906615 748.083 1064.252 1078.026 41395795 TehB Metal Resistance Tellurium Mycobacterium avium subsp. paratuberculosis K-10 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium avium; 2300.8182 5193.8655 3920.2233 3229.2189 2775.0314 4605.6692 3704.7 3449.7903 5948.0168 4972.5093 1329.2813 5078.6894 148530047 silC Metal Resistance Silver Gluconacetobacter diazotrophicus PAL5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter;species:Gluconacetobacter diazotrophicus; 20751.9859 6055.4024 7497.5911 6718.1794 2682.7743 8650.343 11459.8586 4808.3012 6688.2368 13696.7 6361.2585 4807.091 282888920 sigma_70 Stress Sigma factors Burkholderia sp. CCGE1001 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 5258.5832 3412.6092 2753.7786 4210.8931 3817.7427 2730.1956 3438.8316 2455.0854 2788.1846 3315.3747 3406.4966 4082.4899 157912529 glnA Stress Nitrogen limitation Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 2277.5132 1181.5407 1187.4398 1711.2866 2008.4405 1447.2153 1293.7729 1305.4458 1222.8937 1110.5034 1001.441476 1635.0833 146410047 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 3000.4797 2714.0241 3355.9314 3112.0229 3032.8242 2149.2036 2177.5424 4629.9932 2269.1546 2737.6784 5616.8802 4312.7951 168990245 katE Stress Oxygen stress Lysinibacillus sphaericus C3-41 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Lysinibacillus;species:Lysinibacillus sphaericus; 350.625277 547.6113 325.2198449 544.02 529.1101 521.5852 790.5667 550.9415 629.3398 24373346 cytochrome Energy process Energy process Shewanella oneidensis MR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella oneidensis; 3278.7297 2275.196 4358.4434 3307.8701 3522.7386 3708.5761 2628.7582 2940.2125 2415.2206 2627.5214 2849.8225 2909.047 91699574 AceB Carbon cycling Carbon degradation Others Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 4145.4622 8532.7718 4423.6821 7622.679369 6155.7251 29129.58033 7091.193 4693.9158 10899.5836 8220.6397 4009.4901 7807.9937 213924917 pectinase Carbon cycling Carbon degradation Pectin Pseudomonas syringae pv. tomato T1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae group genomosp. 3; 741.212 1445.6684 787.2114 691.1908 1123.009252 716.2566 1741.6967 729.5608 937.5763 811.2537 561.9807473 108770202 AceB Carbon cycling Carbon degradation Others Mycobacterium sp. MCS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 859.7342 853.5876754 893.0617349 637.0811 1557.4121 1009.0858 1117.0396 520.3897597 1070.479 1273.3661 1054.439746 1215.354 83313178 obgE Stress Radiation stress Magnetospirillum magneticum AMB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magneticum; 964.5061 1995.1911 1440.8339 1474.6892 1780.1871 1446.2122 1230.593 1610.1509 1947.0156 1302.157409 1496.7985 119962058 ureC Nitrogen Ammonification Arthrobacter aurescens TC1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter aurescens; 5678.2753 3594.866 4312.6004 5195.0329 1524.8017 4229.5933 3154.5191 3011.5188 3299.8874 3208.8691 1975.8314 2657.2094 121530714 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 1219.350679 838.7953 693.467 625.9439 799.2721 1371.612531 739.2098433 73537345 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 5510.8283 9330.7743 8266.1192 5563.0991 13039.9704 7627.0936 9102.3024 6071.4426 7447.7824 5746.5788 7576.7113 5788.5008 170718009 CopA Metal Resistance Copper Haemophilus somnus 2336 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Histophilus;species:Histophilus somni; 1532.5848 1722.5259 945.9244 1514.7545 1008.3439 2068.0957 1971.9386 1044.3687 1906.0922 1653.2487 1238.8527 620.5902144 188533207 ArsC Metal Resistance Arsenic Erwinia tasmaniensis Et1/99 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Erwinia;species:Erwinia tasmaniensis; 692.3006 488.8627177 736.694 516.5265771 511.3083 730.0611269 458.8852 1020.0366 729.2014 219664365 nahA Organic Remediation Aromatics Polycyclic aromatics Rhodococcus sp. TFB superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 1275.718967 1964.09925 1487.17855 1910.4349 1860.1011 1507.9827 1769.0876 1343.735633 1716.44165 1842.5535 1014.37472 2043.60005 53758878 NiR Nitrogen Assimilatory N reduction Methylococcus capsulatus str. Bath superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae;genus:Methylococcus;species:Methylococcus capsulatus; 1159.119911 1304.7994 1124.291154 2339.7773 1297.0841 1379.7537 1634.6336 1113.868018 1168.546352 1442.303731 91761946 ferroxidase_high_affinity Fungi function iron Phanerochaete chrysosporium superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Corticiales;family:Corticiaceae;genus:Phanerochaete; 368.2754174 405.9392379 840.2515 337.5036403 351.2965 57117052 SMR_antibiotics Antibiotic resistance transporter Mycobacterium tuberculosis H37Rv superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium tuberculosis; 881.9109 484.9998089 825.2757 1203.4782 590.1452 787.9817 681.8942 707.5913 847.1762 188028119 MFS_antibiotic Antibiotic resistance transporter Erwinia tasmaniensis Et1/99 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Erwinia;species:Erwinia tasmaniensis; 370.8812981 393.5293143 670.6192 683.2188 946.3511 482.6095 646.8887 585.9259 829.9282 89512930 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 2321.875155 2091.68535 2522.5135 2316.336145 2961.231273 2456.381309 2001.386836 2576.35851 2068.583182 2066.786982 3620.785109 2757.830118 258645709 ppk Phosphorus Phosphorus utilization Dialister invisus DSM 15470 superkingdom:Bacteria;phylum:Firmicutes;class:Negativicutes;order:Selenomonadales;family:Veillonellaceae;genus:Dialister;species:Dialister invisus; 1562.3777 1061.3784 1382.4724 619.4706 1044.0087 1035.7271 1488.7892 1043.1157 1355.9531 1211.7562 116662145 ZntA Metal Resistance Zinc Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 1644.50945 2465.10465 1205.0907 1878.25255 1591.58665 2454.24455 2059.4622 1543.2403 2186.9655 2204.15105 2074.48845 1841.76195 264673490 fnr Stress Oxygen stress Caulobacter segnis ATCC 21756 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter;species:Caulobacter segnis; 2141.2962 2651.9551 2214.0002 2185.4127 1753.2641 2187.3571 2104.7294 3985.4165 2360.6802 2155.8729 2325.966 1995.5986 77961891 phn Organic Remediation Herbicides related compound Yersinia mollaretii ATCC 43969 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia mollaretii; 4543.891 7807.3764 10018.8542 3577.9579 3019.4388 7067.3695 7505.7385 11735.5401 8812.4553 8638.4324 2997.4777 8880.3528 260089370 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Streptomyces flavogriseus ATCC 33331 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces flavogriseus; 8641.1043 7444.685 6910.9519 6890.9508 8419.1524 7859.29 7922.8992 6208.7656 7178.9715 7900.1849 6492.8653 6954.6518 85089784 metalloprotease_fungi Fungi function carbon degradation Neurospora crassa OR74A superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;family:Sordariaceae;genus:Neurospora;species:Neurospora crassa; 1144.0556 1709.006 1543.1628 1196.1638 2522.2249 1539.8695 1273.0117 1565.6029 1265.0978 1774.628 900.9707 1708.6749 270284147 Tet Antibiotic resistance other Bifidobacterium gallicum DSM 20093 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium gallicum; 429.0300482 452.1940155 453.8302773 365.7291643 971.7794 397.9148465 402.6173769 91223147 endochitinase Carbon cycling Carbon degradation Chitin Vibrio alginolyticus 12G01 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio alginolyticus; 1209.5246 528.0273201 778.3157405 1050.6413 782.2121948 686.0228 703.2098 791.7782 893.8408 1079.665578 996.8174 268310367 spe soil_benifit Thermomonospora curvata DSM 43183 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Thermomonosporaceae;genus:Thermomonospora;species:Thermomonospora curvata; 7085.1473 10639.3201 7491.5426 11291.6094 8681.6472 10918.7632 8917.4367 6975.9222 11310.3717 10432.8138 6369.499 10857.8659 114766404 linB Organic Remediation Pesticides related compound Roseovarius sp. HTCC2601 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pelagibaca;species:Pelagibaca bermudensis; 1796.6907 859.0394 1591.2595 1675.3443 1082.0965 1264.3896 892.4067 2328.1963 1174.073 1295.0625 1458.5817 1717.2302 118059167 phn Organic Remediation Herbicides related compound Pseudomonas mendocina ymp superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas mendocina; 2672.1541 956.6346 2020.6541 2218.7799 1268.848 1508.7754 1478.1453 2194.9888 1229.1026 1577.194 2122.4776 1781.8821 99030541 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 1339.9657 1631.0216 931.6902 661.5209709 1028.4158 1288.4393 1697.5249 1982.6193 1094.4758 995.2768 1135.3787 1170.5454 119957137 SMR_antibiotics Antibiotic resistance transporter Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 4972.9588 12159.8764 9892.2298 11058.5323 13689.4104 11530.1762 9117.0646 7184.9993 5957.2078 7304.3208 13068.0629 9476.5976 218761884 pcc Carbon cycling Carbon fixation Desulfatibacillum alkenivorans AK-01 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfatibacillum;species:Desulfatibacillum alkenivorans; 594.3019866 1522.8246 1026.4877 558.1878 1358.2043 799.1743 734.3125 1082.9935 975.3771 980.3138 830.4088 157804738 APS_AprB Sulphur adenylylsulfate reductase Thiocystis violascens superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Chromatiaceae;genus:Thiocystis; 2584.468 2371.6062 2620.7277 3787.7629 1503.7756 3134.8529 4169.6113 9104.3859 2401.1137 2551.8129 2739.2853 3441.9308 23128027 ppx Phosphorus Phosphorus utilization Nostoc punctiforme PCC 73102 superkingdom:Bacteria;phylum:Cyanobacteria;order:Nostocales;family:Nostocaceae;genus:Nostoc;species:Nostoc punctiforme; 529.1654 878.2424 398.4413621 451.4697422 836.0397 837.7466 613.7031 401.6946075 680.9735 806.508 593.3836248 711.9948 91226729 endochitinase Carbon cycling Carbon degradation Chitin Vibrio alginolyticus 12G01 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio alginolyticus; 643.1152363 754.0476125 630.117 708.5599 487.8793174 539.306 11078845 gyrB other category gyrB Pseudomonas agarici superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 992.4721 394.7526027 634.067 861.7387 591.3658426 691.2991 741.1204 491.5269 458.0478 1045.7189 746.2845 163762421 cap virulence capsule Bacillus selenitireducens MLS10 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus selenitireducens; 2776.4917 1624.3445 2008.2083 2925.9694 1242.8924 1384.2493 1548.9166 1480.292 1613.7039 2172.0196 1746.7568 2290.1712 29466016 norB Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2622.7098 2945.1868 2982.1212 2492.9495 2553.6409 3114.632 3373.9789 4057.679 3841.0504 2665.0742 2737.9159 2712.6744 206596254 CopA Metal Resistance Copper Ralstonia solanacearum IPO1609 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 10043.5973 10667.4301 9222.2939 8319.5616 12576.0685 11648.4954 9945.8688 11769.6015 12197.6828 10724.8835 6706.8284 8450.0084 84686973 sox Sulphur Sulphur oxidation Rhodobacterales bacterium HTCC2654 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Maritimibacter;species:Maritimibacter alkaliphilus; 478.5149167 531.7863833 589.7563 409.7165 708.6048 452.4534 660.2101 154279762 amyA Carbon cycling Carbon degradation Starch Ajellomyces capsulatus NAm1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces capsulatus; 540.3978669 1036.5941 692.4597982 992.2834825 677.0811522 850.5747 478.8113539 813.3054 817.1049 867.0713118 171700351 pstB Stress Phosphate limitation Cyanothece sp. ATCC 51142 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 865.7787 728.10965 1094.8087 1103.15755 1069.3747 1094.4413 777.16335 1014.0717 703.43265 791.94695 1613.26415 1367.87925 40788173 phenol_oxidase Carbon cycling Carbon degradation Lignin Melanocarpus albomyces superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Sordariales;genus:Melanocarpus; 684.3218 1308.4948 972.7934 1014.4387 1153.173821 1107.8272 2271.5639 695.923 1314.8853 969.1027 1075.053 784.6801 256800313 ureC Nitrogen Ammonification Streptomyces viridochromogenes DSM 40736 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces viridochromogenes; 2531.7731 1004.1516 1842.1528 2575.8469 1731.5044 1474.4519 1771.5329 1645.6219 1882.4512 3000.7691 1948.4143 2231734 mip soil_borne_pathogen intracellular survival Legionella oakridgensis superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Legionellales;family:Legionellaceae;genus:Legionella; 595.4134 277.7374263 280.493857 319.8555536 432.5101 492.3579737 222055056 ChrA Metal Resistance Chromium Geobacter sp. FRC-32 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 1302.8657 983.7762 1087.8734 1246.735 1029.0225 1473.643 1558.4828 1063.1667 950.9376 929.8079 1365.1981 2139.3763 118669851 proO Organic Remediation Aromatics Other aromatics Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 2457.788 2782.2987 2770.7171 2381.0681 1718.7577 3437.4186 3518.9167 2840.2675 3530.4781 4062.5665 1531.3763 2800.2868 72122946 vanA Carbon cycling Carbon degradation Others Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 1085.4908 10570.68728 110286166 CadA Metal Resistance Cadmium Mesorhizobium sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 19380.39142 16521.67941 15311.26959 20838.40369 35609.8377 22841.74868 16389.0291 24425.97791 15725.7266 17797.16707 51354.9203 19668.3237 240008799 CysJ Sulphur sulfite reductase Methylobacterium extorquens AM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 1133.1486 578.0405 687.485 1109.883 763.7456393 1011.8527 1070.9178 750.7433 882.3487 888.1347 927.9503 752.8073 111026491 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 12098.0742 6848.002217 534.1969816 597.5591517 743.3166 750.2591 724.7584 220922952 SMR_antibiotics Antibiotic resistance transporter Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 541.3216 1572.597 1089.2256 790.4431 1071.5171 1164.5863 1583.4076 793.0356 1337.7755 1782.3998 1249.5339 186455655 exaA Organic Remediation Chlorinated solvents bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3;genus:Pedosphaera;species:Pedosphaera parvula; 993.0587 792.3321 846.0674465 844.2226 1223.0474 838.8987 556.3632128 574.271158 73539477 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 623.4592395 2026.4868 1053.2694 1541.6153 1496.7985 1475.722 1729.1712 973.583 1453.4028 1949.7849 1523.6727 213987327 benD Organic Remediation Aromatics Aromatic carboxylic acid Acinetobacter baumannii AB307-0294 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter;species:Acinetobacter baumannii; 1304.0611 1102.779 2639.9344 629.8112484 949.8538 1462.9343 1556.5099 1579.1476 1637.9919 1569.4445 1558.649 256559704 hrcA Stress Heat shock Brachybacterium faecium DSM 4810 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Dermabacteraceae;genus:Brachybacterium;species:Brachybacterium faecium; 3886.0173 3195.3741 4039.578 4327.5412 2529.0314 4553.3521 3759.2372 3161.0429 3733.0531 3701.8679 3920.495 4022.2598 47155102 mcrA Carbon cycling Methane Methane production uncultured methanogenic archaeon superkingdom:Archaea;phylum:Euryarchaeota; 769.1468 1130.443 1192.4268 589.3351231 1087.2324 695.7267 719.7443 1132.0902 1320.3545 949.8391 158423080 CopA Metal Resistance Copper Azorhizobium caulinodans ORS 571 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Azorhizobium;species:Azorhizobium caulinodans; 7905.8741 5483.2872 8432.1892 8629.9612 3164.1 8951.8169 10320.3488 8788.3313 7047.8511 10448.0002 5807.8518 6626.4349 91685103 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1680.649 1547.1883 905.9263 1312.7845 1330.201 1178.3162 940.3178 1080.1732 942.0728 961.677 2359.6005 730.7644773 159046303 fnr Stress Oxygen stress Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 2053.0863 3042.3743 2424.2847 1844.5498 3462.9719 1892.6584 2404.068 1181.8006 2502.3313 1820.1089 2663.1994 2261.5942 116125638 SMR_antibiotics Antibiotic resistance transporter Leptospira borgpetersenii serovar Hardjo-bovis JB197 superkingdom:Bacteria;phylum:Spirochaetes;class:Spirochaetes;order:Spirochaetales;family:Leptospiraceae;genus:Leptospira;species:Leptospira borgpetersenii; 4165.9195 4469.6806 3371.7067 3835.307 5156.2163 6419.386198 3333.9134 3472.97 3249.331 3698.0601 6687.2484 4307.8377 146337645 amyA Carbon cycling Carbon degradation Starch Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 4935.6036 3233.7802 2597.3482 4841.4313 2448.7188 3959.408 5740.6998 4411.4021 3381.7095 4618.1197 2596.5551 2186.7529 254477664 glnA Stress Nitrogen limitation Ruegeria sp. R11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 1054.3413 1400.8528 833.3187938 951.1835 1546.9275 1451.3133 919.2355 955.3713006 1551.2656 1049.7468 783.7305401 598.0143091 241463369 sox Sulphur Sulphur oxidation Allochromatium vinosum DSM 180 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Chromatiaceae;genus:Allochromatium;species:Allochromatium vinosum; 1769.65815 761.7266 1175.43745 1713.2385 969.59065 853.4058 952.67695 864.6203 895.50035 1272.50065 1506.2946 1328.83815 153896435 catB Organic Remediation Aromatics BTEX and related aromatics Halorubrum lacusprofundi ATCC 49239 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halorubrum;species:Halorubrum lacusprofundi; 1645.7922 754.4709064 1559.97 718.5396787 683.971462 753.474285 1078.8912 1516.504901 1153.4212 111061802 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Phaeosphaeria nodorum SN15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Phaeosphaeriaceae;genus:Phaeosphaeria;species:Phaeosphaeria nodorum; 3188.6259 3126.5771 3977.3344 3801.6248 2987.3023 3105.8377 3714.5185 3934.7722 2982.384 3407.3528 3498.5829 3623.802 229544055 glnR Stress Nitrogen limitation Bacillus coagulans 36D1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus coagulans; 3205.49685 2058.5789 3010.5895 3444.20155 1800.96625 1961.35265 2181.0466 1997.4047 2426.7938 2703.95575 2547.58095 2943.39155 13423939 vdh Carbon cycling Carbon degradation Others Caulobacter crescentus CB15 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter;species:Caulobacter vibrioides; 2080.5823 3392.5142 1871.508 2417.0789 1277.4556 3767.6534 3222.0787 1761.0385 2939.2247 3178.8984 765.1595234 2581.6129 149408192 endolysin_transglycosylase Bacteria phage LYSIS Pseudomonas phage PA11 superkingdom:Viruses; 613.1744731 610.7649375 671.6419 522.2883 679.5979182 58002781 ppx Phosphorus Phosphorus utilization Gluconobacter oxydans 621H superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconobacter;species:Gluconobacter oxydans; 5212.7791 9993.5911 8946.1164 5663.6663 7689.8739 4496.4285 5028.261 14515.1894 5894.7346 6915.371 13866.5927 11642.8756 301128132 necrosis_Oomycetes soil_borne_pathogen oomycete virulence Phytophthora infestans T30-4 superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora;species:Phytophthora infestans; 1709.1927 568.4085783 1568.4761 1643.5797 917.7932 974.2825 15200.22482 1219.5781 1039.9937 1371.3405 997.7657121 931.0807 45386121 narG Nitrogen Denitrification unidentified bacterium superkingdom:Bacteria; 1726.789 949.4902 1120.1074 1601.7886 1235.1758 1055.3306 971.1039 1144.3379 907.1493 977.042 1544.5658 1652.5783 237801221 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas coronafaciens; 2165.4341 1892.09105 1905.1888 2062.95685 1444.0341 2088.76525 2488.17915 1442.6598 2090.64045 1811.4047 2584.8792 1193.40515 222106593 cspA Stress Cold shock Agrobacterium vitis S4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium vitis; 688.1405564 417.3324668 596.0626945 761.555 723.913 460.7361 448.8452 852.7483 705.1149 120405401 CopA Metal Resistance Copper Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 1710.5628 1741.4613 2275.0951 1385.7238 3261.7227 1709.8627 5119.5296 1579.1718 1588.2393 1630.86 1886.9644 1668.5353 56388199 pstB Stress Phosphate limitation Anaplasma marginale str. St. Maries superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rickettsiales;family:Anaplasmataceae;genus:Anaplasma;species:Anaplasma marginale; 13696.3494 7128.95 9180.9436 11503.0581 7273.5414 6524.4413 6924.76 7174.8681 6747.8095 9215.347 8163.5603 8889.0316 260864646 hrcA Stress Heat shock Ammonifex degensii KC4 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Ammonifex;species:Ammonifex degensii; 3940.6331 4620.132 4264.3293 3637.9667 6208.8687 4140.0201 2922.0634 3858.0795 3764.9479 3725.1164 6766.962 4609.5512 46196568 ppx Phosphorus Phosphorus utilization Thermus thermophilus HB27 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Thermales;family:Thermaceae;genus:Thermus;species:Thermus thermophilus; 4544.154499 764.8337 1480.2796 528.3127414 673.5363264 745.0754 1943.0505 888.0683 858.8563 1211.5502 196210603 ChrA Metal Resistance Chromium Geobacillus sp. G11MC16 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 3945.8582 4157.2459 3838.4097 3169.936 1500.0405 3469.8737 6015.8935 3680.9819 2948.835 2889.4528 2955.771 1983.9261 196196114 ppx Phosphorus Phosphorus utilization Alcanivorax sp. DG881 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax; 3705.635 8088.8467 5698.7223 5978.3806 4917.8571 8326.3599 5674.8148 6264.7236 7886.2251 9137.0032 4376.8023 8469.1925 148978109 atzB Organic Remediation Herbicides related compound Vibrionales bacterium SWAT-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales; 1927.1048 1844.9309 1619.4079 2429.9957 2222.8539 1823.3061 1932.0337 3400.9617 1465.541 1600.5765 1666.0822 2019.7126 192764452 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3025.3429 6291.3563 5135.3608 5199.1421 3982.0713 5943.5092 5218.9536 5558.9598 6283.7624 5459.1432 2991.5917 6104.7842 28896804 pimF Organic Remediation Aromatics Aromatic carboxylic acid Vibrio parahaemolyticus RIMD 2210633 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio parahaemolyticus; 331.8468172 415.446564 520.515281 691.2836 7629.057604 442.4717 379.2533054 775.7816 62825529 nifH Nitrogen Nitrogen fixation uncultured bacterium superkingdom:Bacteria; 1894.277518 1581.88756 1589.28499 1718.593591 1809.483863 1621.5154 1662.922327 1710.580936 1468.390791 1713.690645 1778.857171 1551.916436 117647767 pstA Stress Phosphate limitation Acidothermus cellulolyticus 11B superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Acidothermaceae;genus:Acidothermus;species:Acidothermus cellulolyticus; 542.7723 587.9047364 501.3812556 614.197 726.5863 481.4393826 600.0764 588.5858 611.0728 31088842 phenol_oxidase Carbon cycling Carbon degradation Lignin Ceriporiopsis subvermispora superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Gelatoporia; 3099.516 3130.6929 1666.7921 1873.6022 2108.8691 1682.6572 1517.4882 1311.1953 1829.5586 1905.7779 2773.6164 1639.5875 99078028 tfdA Organic Remediation Aromatics Chlorinated aromatics Silicibacter sp. TM1040 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 2417.6792 2356.2132 899.4562 1984.3193 1796.3212 933.3322 1419.131 1225.9449 1059.098 1066.3178 3794.3978 1092.2573 114864313 iro virulence Iron oxidation Acidithiobacillus ferrooxidans superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus; 3352.7417 6368.7036 4609.4386 4119.5032 4040.2012 6873.865 5939.9491 5541.2512 7207.5347 5978.5729 2105.5883 6889.7527 110677777 dnaK Stress Heat shock Roseobacter denitrificans OCh 114 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter denitrificans; 6652.3184 5000.9178 7476.7414 2269.7758 5764.7606 6236.2336 6093.6617 7153.0199 7564.0271 6435.2919 4177.6143 6848.1849 214042743 pcc Carbon cycling Carbon fixation Roseobacter sp. GAI101 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 5625.821054 7497.0059 3756.2034 4269.190204 6984.3896 6492.2853 3578.11819 2834.321854 6819.9979 3259.396565 8776.4759 3505.643976 153003295 pstB Stress Phosphate limitation Anaeromyxobacter sp. Fw109-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter; 19999.6698 26326.2721 30941.9639 25320.5733 16073.098 32350.9891 23902.188 29492.4958 32188.4574 31514.4564 20828.7066 32552.3262 148653300 iro virulence Iron oxidation Psychrobacter sp. PRwf-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Psychrobacter; 743.0478 754.9072 545.8867661 769.2804 937.1509 772.8363 658.1464 801.327 538.4022 747.1025 1455.0741 884.2534 152969804 iro virulence Iron oxidation Klebsiella pneumoniae subsp. pneumoniae MGH 78578 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Klebsiella;species:Klebsiella pneumoniae; 1037.7659 1719.1746 1092.526 1082.1045 1911.3866 1371.4991 1037.4821 1379.4634 1343.99605 1273.50005 1075.1971 1237.6966 157060121 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 468.1988529 1063.8505 1008.8658 795.607 613.8897315 658.2113 748.5815 1057.3929 678.9 828.2714 954.5936 1002.6949 115617205 mdlB Organic Remediation Aromatics Aromatic carboxylic acid Strongylocentrotus purpuratus superkingdom:Eukaryota;kingdom:Metazoa;phylum:Echinodermata;class:Echinoidea;order:Echinoida;family:Strongylocentrotidae;genus:Strongylocentrotus; 845.8452 1802.8932 1021.5297 1226.2846 1401.1855 1369.5622 3005.2111 1057.2477 19209.38902 993.1775 1592.6871 914.3684 116227381 sigma_24 Stress Sigma factors Candidatus Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 5125.4154 2329.4028 4070.7943 4778.0802 3939.6967 2770.3382 3184.4334 2422.5975 3979.2301 3619.2361 3846.211 3727.8245 88805218 ppx Phosphorus Phosphorus utilization Robiginitalea biformata HTCC2501 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Robiginitalea;species:Robiginitalea biformata; 2123.9148 1042.3028 1751.8917 2294.7053 1775.9018 1432.4983 1228.8284 2206.3305 1477.3647 1514.0924 2819.3353 1609.3351 46200846 sigma_24 Stress Sigma factors Magnetospirillum magnetotacticum MS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magnetotacticum; 5612.6205 3277.71655 5158.71855 5621.67655 5069.67555 4314.0889 5114.52865 4654.893179 4363.85465 4683.71705 4535.36465 4951.5141 33391367 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1761.404 756.3089 923.1556 2235.3265 1188.6112 873.3661 1209.241 1040.8907 1207.1267 1479.315 1401.0978 154250930 pimF Organic Remediation Aromatics Aromatic carboxylic acid Parvibaculum lavamentivorans DS-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Parvibaculum;species:Parvibaculum lavamentivorans; 4794.5376 6526.6986 5862.655 4478.2003 9881.236 7081.9369 4924.1114 5226.5401 5809.8604 6875.8753 3394.9888 6639.5905 118473579 pnbA Organic Remediation Aromatics Nitoaromatics Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 851.4465 1360.2423 1250.5993 1361.6436 1201.9966 1530.791 1279.458 786.5962 1200.1783 1273.2209 928.1282 218779578 tutFDG Organic Remediation Aromatics BTEX and related aromatics Desulfatibacillum alkenivorans AK-01 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfatibacillum;species:Desulfatibacillum alkenivorans; 3289.5293 2801.9987 3176.06335 3805.24775 2471.9537 3475.59455 3201.24305 3182.31615 2793.85175 3371.4247 3537.93515 2971.9137 94471161 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1854.8928 2223.9837 2070.6408 1823.1132 829.2332 2046.8278 1702.8929 2932.5263 2911.7448 1409.6526 1190.899481 2048.0287 268589720 SMR_antibiotics Antibiotic resistance transporter Providencia rettgeri DSM 1131 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Providencia;species:Providencia rettgeri; 2156.3404 2333.3403 2244.5185 2318.9773 2868.7484 2231.3286 1874.1434 1968.8326 1925.4294 2076.982 3589.0115 2393.0677 56421872 ChrA Metal Resistance Chromium Geobacillus kaustophilus HTA426 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus;species:Geobacillus kaustophilus; 2311.5775 732.0743657 1929.5787 1861.8087 981.5334446 1066.2039 1152.4252 752.1716 1163.1929 1584.7537 2863.3724 1641.3864 83726035 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia solanacearum UW551 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 2056.7399 1621.5666 2130.2527 1296.9775 1088.7324 1423.4647 1453.4384 3285.9106 1222.3928 1475.1662 3111.4024 1686.813 261371012 dsrB Sulphur sulfite reductase Fibrobacter succinogenes subsp. succinogenes S85 superkingdom:Bacteria;phylum:Fibrobacteres;class:Fibrobacteres;order:Fibrobacterales;family:Fibrobacteraceae;genus:Fibrobacter;species:Fibrobacter succinogenes; 3783.905 4410.5998 3637.663 4384.73525 6713.2113 4454.79765 3381.254158 3329.2499 2759.351156 2408.909708 8923.21825 4435.8919 197210245 CODH Carbon cycling Carbon fixation uncultured bacterium superkingdom:Bacteria; 3776.3426 6621.8472 8663.0181 4719.7835 4098.636812 5045.4888 4444.9656 8905.8275 5808.2412 3851.916162 4521.5265 8513.3969 90415661 linB Organic Remediation Pesticides related compound marine gamma proteobacterium HTCC2207 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 584.1471114 1121.2812 934.1619 1714.5108 771.7893 1206.84 848.0616 864.4676 541.8071778 868.9938497 712.8874 167350654 sigma_24 Stress Sigma factors Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 2609.5058 2637.6452 3105.576 2287.1442 1668.8183 3478.1446 2417.1899 2755.5861 3330.7687 2918.1953 1871.4686 2926.9814 40846254 bphA Organic Remediation Aromatics Polycyclic aromatics Rhodococcus sp. DK17 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 3535.5553 2914.2734 3884.1218 4074.3014 3048.5416 3769.5678 2641.4328 2485.0919 3557.3056 3323.7384 5452.7681 4323.0394 115258222 ChnA Organic Remediation Other Hydrocarbons Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 10395.8325 18061.5145 11215.5847 15866.9526 14369.3562 19336.9248 12972.7472 11870.6238 13504.1925 14119.071 12472.7333 16962.2656 147886048 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured bacterium superkingdom:Bacteria; 12896.2949 14489.8654 13774.6796 13388.7142 6886.0275 13655.1955 14983.9484 11886.3593 11362.6754 11783.2954 12804.9455 7801.8553 269796461 pstC Stress Phosphate limitation Sanguibacter keddieii DSM 10542 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Sanguibacteraceae;genus:Sanguibacter;species:Sanguibacter keddieii; 8942.1624 12652.6311 10552.6714 10809.0593 15528.8645 8824.8679 14870.7487 7071.3039 11001.3137 8388.9181 11866.1041 8669.9732 39945316 sulfate_transporter Fungi function Sulfur Magnaporthe grisea 70-15 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe;species:Magnaporthe oryzae; 2202.0371 1683.5337 1482.8531 2275.0356 1604.6593 1435.5494 1461.0891 1169.6116 1602.9519 1543.1922 1588.2185 1389.8785 119880084 nmoA Organic Remediation Aromatics Nitoaromatics Salinispora arenicola CNS205 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora arenicola; 5384.8871 4169.6826 2806.3388 5384.1409 4170.6807 3237.1689 3483.7146 2234.2187 3623.7511 3107.7457 6057.7557 3281.6193 60476334 dsrB Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 11635.0022 3613.3427 7298.0366 9171.9312 5284.7241 4850.1447 5077.5257 7231.5645 5482.6534 5677.5589 10968.8411 6079.3794 259444858 tre_fun soil_benifit Magnaporthe grisea superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Magnaporthales;family:Magnaporthaceae;genus:Magnaporthe; 2339.6107 1669.3894 1939.7273 2373.5071 987.2609 1393.3128 3038.471244 1258.3481 1565.7335 1721.3752 1232.0778 1302.1562 153004239 cytochrome Energy process Energy process Anaeromyxobacter sp. Fw109-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter; 2371.8482 1476.2123 2300.1175 2796.8291 1675.7006 2000.2689 1859.5304 1770.1651 1692.3924 2159.3903 1445.5604 2415.1219 158336732 sigma_24 Stress Sigma factors Acaryochloris marina MBIC11017 superkingdom:Bacteria;phylum:Cyanobacteria;genus:Acaryochloris;species:Acaryochloris marina; 572.1654331 790.7033 703.5504 374.2974467 336.6882171 371.2061996 848.1885451 118715769 PobA Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia multivorans ATCC 17616 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 2324.7949 2864.2843 2083.1884 2110.6516 2013.1045 2088.0324 3641.694 1923.9862 2652.5211 1856.9136 2158.8749 1914.8661 116062724 narJ Stress Oxygen limitation Aeropyrum pernix K1 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Desulfurococcales;family:Desulfurococcaceae;genus:Aeropyrum;species:Aeropyrum pernix; 5924.2073 3847.0539 4995.8836 6089.4538 3645.3689 3899.9119 3303.1617 3711.993 3999.7438 4799.7532 3966.0776 5814.3176 254421108 AceA Carbon cycling Carbon degradation Others Brevundimonas sp. BAL3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Brevundimonas; 4884.9907 2796.6851 3973.0017 5253.9459 4416.3394 3505.8436 3444.9338 1894.125 4154.4883 4289.7368 5814.5306 4654.7169 148261032 cytochrome_bd Bioleaching Electron transport Acidiphilium cryptum JF-5 1043.9178 870.6816 651.9959902 152966132 nmoA Organic Remediation Aromatics Nitoaromatics Kineococcus radiotolerans SRS30216 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Kineosporiaceae;genus:Kineococcus;species:Kineococcus radiotolerans; 5363.5029 4776.9546 5318.4566 5701.7591 4995.5153 5195.605 4389.3694 4591.9495 5371.1149 4954.1517 5325.7501 1315.0509 157317024 linB Organic Remediation Pesticides related compound Shewanella sediminis HAW-EB3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella sediminis; 515.2524615 486.944 357.5125767 501.1239 905.6331 960.643 868.0458 629.5085 547.5692 1007.5699 221725500 phoB Stress Phosphate limitation Agrobacterium radiobacter K84 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 731.4692 1005.7253 450.9355395 641.3999697 784.1432 984.0289 968.1082 924.3364 1125.6955 119373871 AceA Carbon cycling Carbon degradation Others Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 1529.7103 1813.4185 2825.3565 1731.0932 4299.3401 1403.8869 2969.8484 1334.4597 2129.2392 1363.3565 1604.6513 1882.0733 330820769 CysJ Sulphur sulfite reductase Burkholderia gladioli BSR3 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia gladioli; 10522.4722 9551.4499 10505.9996 10723.5183 5766.7703 12647.9045 12712.4992 7486.6015 10164.5939 10770.7254 9872.1259 9244.0128 150377217 catB Organic Remediation Aromatics BTEX and related aromatics Sinorhizobium medicae WSM419 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium medicae; 1230.788 1895.4169 1537.4197 1215.8471 1500.625664 1179.3332 2947.7453 713.7202687 1328.4563 1192.588 1606.9096 887.1509 89953008 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Saccharophagus degradans 2-40 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Saccharophagus;species:Saccharophagus degradans; 1428.3636 3365.551 3144.9925 1585.3652 1941.1341 3144.4548 2946.2312 3406.7354 3292.5719 3575.8433 1146.8625 3316.1013 186476874 ChrA Metal Resistance Chromium Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 2082.9665 1488.2667 1224.11565 1746.1605 1883.8195 1189.41375 1549.44425 1374.307 1448.58015 1423.88425 1427.9744 1948.27695 56695642 pimF Organic Remediation Aromatics Aromatic carboxylic acid Silicibacter pomeroyi DSS-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria pomeroyi; 1415.0388 1360.2678 775.6379 1372.7522 1209.6753 655.6238 1020.4373 771.1269 868.1952 807.4236 2105.9247 1050.2775 262081675 amyA Carbon cycling Carbon degradation Starch Haliangium ochraceum DSM 14365 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Haliangiaceae;genus:Haliangium;species:Haliangium ochraceum; 2085.9955 648.303 1042.9173 1654.8528 981.4972 742.9835 1197.2509 904.7944 1176.1465 1242.4462 1073.6836 885.558 144166 xylanase Carbon cycling Carbon degradation Hemicellulose superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Butyrivibrio; 1011.2908 623.0626072 445.9051 1728.911215 568.4897198 794.6046 1447.6505 639.5819887 219536585 narI Stress Oxygen limitation Desulfitobacterium hafniense DCB-2 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium;species:Desulfitobacterium hafniense; 561.7822075 450.6161041 1028.9739 573.4469 702.0893372 513.0417876 435.4568604 810.6473 618.1625 552.6164 56696014 ppx Phosphorus Phosphorus utilization Silicibacter pomeroyi DSS-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria pomeroyi; 6396.1779 2574.646 4393.8471 6261.4674 3519.1742 4026.9057 4750.7504 5317.3343 3883.4409 4779.9104 3838.9154 3928.3992 87199242 silC Metal Resistance Silver Novosphingobium aromaticivorans DSM 12444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium;species:Novosphingobium aromaticivorans; 1619.5858 1798.2421 1622.8828 1260.8709 2983.8896 2268.8838 1577.8101 1761.6074 1880.0568 2016.672 2272.9783 29607183 ppx Phosphorus Phosphorus utilization Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 4073.1561 6005.0821 5396.8244 3847.1416 9792.202 4933.9298 6718.1812 4193.4647 5095.2448 4150.8708 5121.0845 5089.5929 116633898 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1226.4493 1880.0239 2150.1137 1000.4261 1076.6172 1733.2692 1920.0129 2169.0856 2005.7605 2102.6201 740.8226023 2209.068 211584244 chnC Organic Remediation Other Hydrocarbons Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 2096.0025 2117.9274 2271.6928 1523.6579 4043.7087 1685.5288 2071.5575 1245.336 1636.0815 1331.6549 3265.8565 1746.6998 187928869 metC Metal Resistance Mercury Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 2046.7463 1638.7605 2398.0555 1028.3965 912.1416654 2273.1912 2089.3937 2774.3961 2463.086 2269.6925 2347.3802 72119265 pstB Stress Phosphate limitation Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 884.9466 1897.4174 1348.3919 1218.9975 1343.9277 1556.127 1467.1224 1052.0065 1351.1019 1841.113 868.6575053 1378.92 261823383 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium wasabiae; 3022.4415 855.7518 1501.231 2798.9796 1710.6051 1296.3363 1394.5044 1690.87 1257.6541 1562.5771 1889.6552 2278.0868 147886076 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured bacterium superkingdom:Bacteria; 707.0403 494.2333507 369.0586581 829.6301 479.2107971 513.9023 62120311 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 582.3707 446.5600697 333.3072783 268309813 pstC Stress Phosphate limitation Thermomonospora curvata DSM 43183 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Thermomonosporaceae;genus:Thermomonospora;species:Thermomonospora curvata; 4704.4338 4452.8095 3969.8175 4057.4808 6957.8841 5425.3785 3664.5657 5331.7989 5866.1015 4579.9751 5309.1971 4649.2239 15606302 dnaK Stress Heat shock Aquifex aeolicus VF5 superkingdom:Bacteria;phylum:Aquificae;class:Aquificae;order:Aquificales;family:Aquificaceae;genus:Aquifex;species:Aquifex aeolicus; 485.7952637 701.2101 455.5962662 493.0416678 1046.1682 742.475 540.8556 599.5242 664.4931 669.2533154 529.4077258 226090968 ppx Phosphorus Phosphorus utilization Gemmatimonas aurantiaca T-27 superkingdom:Bacteria;phylum:Gemmatimonadetes;class:Gemmatimonadetes;order:Gemmatimonadales;family:Gemmatimonadaceae;genus:Gemmatimonas;species:Gemmatimonas aurantiaca; 388.4239795 1083.74155 843.91535 822.5775 960.2057 803.3022 1108.4828 1051.0866 1329.0155 511.9594 785.81305 72120723 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 7275.5501 4817.7563 3833.2627 7790.0564 5649.5876 4930.5946 3994.0709 3125.9526 5002.0882 4188.8256 9502.1631 3655.1392 258510317 pilin virulence pilin Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Alicyclobacillaceae;genus:Alicyclobacillus;species:Alicyclobacillus acidocaldarius; 2341.7061 671.0246314 1733.0194 1850.3575 1154.7874 1075.9703 823.677 1447.1505 766.7951 1007.0798 2503.8442 1172.3031 15809259 rd Organic Remediation Chlorinated solvents Desulfitobacterium frappieri superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium; 773.0824 605.7310358 652.1054 471.7666283 504.467354 415.1238359 895.3354 77378679 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 13654.89543 4853.0531 4190.0326 5193.1837 2652.8182 5317.3941 8277.6504 2409.0286 4907.1144 4205.1956 4387.0848 3034.1075 87301938 fnr Stress Oxygen stress Synechococcus sp. WH 5701 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 3512.089 3676.6859 3892.9182 3528.3865 3513.2967 3802.2623 3083.1284 2432.5835 3747.2531 4357.2268 3030.2473 4502.6448 152980264 sigma_24 Stress Sigma factors Janthinobacterium sp. Marseille superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Janthinobacterium; 1111.7912 1082.8241 1436.1522 708.3844336 882.7143 2019.4526 873.0645 973.9936 1320.1456 6136053 mdlD Organic Remediation Aromatics Other aromatics Sphingomonas chungbukensis superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingobium; 985.2378202 788.5117 1033.2328 1160.3403 256391377 sigma_24 Stress Sigma factors Catenulispora acidiphila DSM 44928 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Catenulisporaceae;genus:Catenulispora;species:Catenulispora acidiphila; 1279.4935 812.5418 1147.6888 1298.5665 712.1757925 641.2461488 15186.98814 1180.8081 862.7435 949.0477 802.6619258 893.715 147677213 dnaK Stress Heat shock Pelotomaculum thermopropionicum SI superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Pelotomaculum;species:Pelotomaculum thermopropionicum; 8054.6636 11245.1649 10030.0496 6614.0143 12296.2447 6155.1705 10119.3675 5174.3344 7685.875 6613.0729 9533.1308 17386.0733 86573289 fnr Stress Oxygen stress Rhodopseudomonas palustris HaA2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 2918.489 2242.1036 1349.8313 2635.7188 1964.3785 1512.5892 2386.7938 1802.302 2328.5292 1772.5175 1824.5966 3207.1488 111281564 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Acidovorax avenae subsp. citrulli AAC00-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax citrulli; 8035.0256 3216.2082 6021.368 7479.5609 5085.2318 4153.2415 3892.6626 4386.9757 5071.3178 4967.0378 8040.3381 4676.5513 76556358 bclA Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas; 2214.1799 1262.5833 1335.0301 1913.7908 705.8243592 1431.9898 1103.7685 1199.1824 1414.1226 1619.727 1115.4383 1839.9562 209401894 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 943.6457 1076.2744 1491.7221 648.386 997.6887 673.691 717.7036 2066.0662 888.8721 837.1376 24785.47641 1119.7357 188581801 CopA Metal Resistance Copper Methylobacterium populi BJ001 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 1105.9079 1867.8292 1722.0712 1293.6216 734.0740179 2072.8368 1767.0574 1644.2807 2258.4608 1796.9497 965.2123775 1967.516 186472722 pcaG Organic Remediation Aromatics Other aromatics Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 2278.627749 4315.5339 2678.7548 2102.8577 3619.6408 3953.0217 3469.87 2112.5224 3338.3638 3526.3089 1244.9309 3651.4315 158295517 pbrA Metal Resistance Lead Anopheles gambiae str. PEST superkingdom:Eukaryota;kingdom:Metazoa;phylum:Arthropoda;class:Insecta;order:Diptera;family:Culicidae;genus:Anopheles;species:Anopheles gambiae; 2016.5102 1432.2632 1907.7259 2240.5589 1486.6172 1224.7704 1060.1358 1479.2995 1343.0525 1493.7025 2249.1834 1799.281 254477310 pstB Stress Phosphate limitation Ruegeria sp. R11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 4010.789933 4100.0191 3336.123733 3594.483167 5210.46905 2714.646 3195.1275 5486.5399 3191.428033 3041.543567 5812.961033 4953.6907 161392212 pcaG Organic Remediation Aromatics Other aromatics Roseobacter litoralis Och 149 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter litoralis; 1781.2972 829.6041 1238.4298 1536.15 1309.3076 1171.7952 1169.8485 1438.6654 861.3224 1167.3518 1233.903517 1342.8314 162568495 aoxB Metal Resistance Arsenic Variovorax sp. 4-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Variovorax; 1196.394751 1571.69225 1771.709 1512.122291 2274.9926 1432.7077 1079.3312 1163.3114 1315.22895 992.57455 2017.8745 1410.58 163794220 PhaB Organic Remediation Aromatics Aromatic carboxylic acid alpha proteobacterium BAL199 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 2187.2884 1110.2079 1234.286 2310.0328 1644.7776 1057.5142 1208.2508 1247.781 1783.9298 1946.0888 1471.8753 1456.6314 170693199 fnr Stress Oxygen stress Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 645.1532 1312.2921 915.217 701.6968 1611.9018 970.8426 987.7357 1099.3463 854.8572 1306.2066 1281.6538 118592596 ohbAB Organic Remediation Aromatics Aromatic carboxylic acid Stappia aggregata IAM 12614 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia aggregata; 1343.7133 2523.765 2159.8987 2155.4562 1877.2595 2615.0322 1500.2943 2534.8283 3326.5518 2497.8454 1038.7037 2515.217 218224248 catB Organic Remediation Aromatics BTEX and related aromatics Parabacteroides johnsonii DSM 18315 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Porphyromonadaceae;genus:Parabacteroides;species:Parabacteroides johnsonii; 421.172109 787.783 649.4352 811.4492 548.8389 439.9337 318.9248945 535.7383172 118666821 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 2512.149583 3091.8281 2799.25805 2067.0798 1716.97245 1884.19315 2062.38705 4265.302911 2009.1911 2728.41025 3197.241976 2275.1343 170698349 cap virulence capsule Burkholderia ambifaria IOP40-10 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ambifaria; 2612.0445 3408.0983 3331.4323 2616.0218 2173.3884 3638.117 3353.0802 3631.4996 3922.4881 3835.2511 1813.352873 3447.8219 283782915 srt virulence surface protein Gardnerella vaginalis 409-05 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Gardnerella;species:Gardnerella vaginalis; 4272.1019 4754.4258 2047.8429 3747.7935 2963.2806 2825.9009 2527.1206 2235.5865 3202.8518 2501.0055 5277.9411 2086.905 89053704 alkB Organic Remediation Other Hydrocarbons Jannaschia sp. CCS1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Jannaschia; 3699.4696 4073.2215 5281.7008 3500.786 3538.8732 3859.141 3417.6002 5393.7607 3597.9953 3284.4325 4625.3368 5445.6589 261338340 pcc Carbon cycling Carbon fixation Bifidobacterium gallicum DSM 20093 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Bifidobacteriales;family:Bifidobacteriaceae;genus:Bifidobacterium;species:Bifidobacterium gallicum; 5912.0376 13331.0447 9917.7611 14394.2769 10135.8246 13172.4963 13932.962 29679.9667 12194.9103 11432.8763 9221.3819 319942989 CysJ Sulphur sulfite reductase Lautropia mirabilis ATCC 51599 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Lautropia;species:Lautropia mirabilis; 1290.4811 4730.2149 1970.1003 1503.8513 3547.6704 1876.9842 2854.9282 1532.7035 2173.0508 1605.3558 2908.947 1191.9129 146277988 fnr Stress Oxygen stress Rhodobacter sphaeroides ATCC 17025 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 1501.4488 1725.1763 1445.9518 1903.2437 1726.4364 1911.3837 1516.7885 1344.1553 1820.8336 1960.661 1459.0142 2095.8036 219569639 B_lactamase_A Antibiotic resistance Beta-lactamases Clostridium kluyveri NBRC 12016 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium kluyveri; 1629.7272 1112.6035 1874.6195 1543.3275 1853.1429 1959.1541 1074.8177 1398.3582 1045.3173 1000.6032 2765.6163 2253.7256 126732580 SilA Metal Resistance Silver Sagittula stellata E-37 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 3527.6839 1844.7652 2224.8612 3077.9297 1599.7108 2573.0349 3338.1918 3162.4107 1815.778 2993.7363 1851.3359 1805.1172 89092407 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Oceanospirillum sp. MED92 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Oceanospirillaceae;genus:Neptuniibacter; 2023.1055 2687.9911 1475.2053 1362.6298 3562.6863 1833.5661 1397.7161 2267.5418 2424.1204 2403.4219 1113.813323 160917613 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 588.4992008 544.2982 526.5039 979.7566 652.3964811 863.2321 936.6358 1294.7214 677.9596668 620.123006 869.2165 212529480 hmgA Organic Remediation Aromatics Aromatic carboxylic acid Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 1221.7883 819.4482 1163.784 1359.6848 1410.817 1179.2584 907.5818 904.9396 953.547 1082.2858 2014.6312 1185.2665 317171024 cat_bac soil_benifit Mesorhizobium ciceri biovar biserrulae WSM1271 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium ciceri; 4554.1264 2937.4521 3526.7412 5136.0239 3609.232 4353.2071 3584.0676 4090.8931 3701.7291 4040.9483 3880.5741 3703.2024 193086210 sox Sulphur Sulphur oxidation Chlorobaculum parvum NCIB 8327 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobaculum;species:Chlorobaculum parvum; 3168.4103 4578.0815 2982.9645 3026.9749 5802.9071 4175.99 3516.6456 4539.2959 3495.7992 4831.5441 3086.4648 3937.9844 116804528 nasA Nitrogen Assimilatory N reduction uncultured prokaryote 1021.8486 1245.7632 933.1587 899.2151 1094.2306 1261.6526 951.2604 686.9659 1097.9239 1083.8268 1052.0854 1089.0027 327372764 CysJ Sulphur sulfite reductase Burkholderia gladioli BSR3 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia gladioli; 7021.2498 7602.9985 8453.0679 6718.0744 11342.618 7152.5007 7956.1399 5543.89 9503.5983 5910.0444 9959.8799 7107.4516 119718326 pimF Organic Remediation Aromatics Aromatic carboxylic acid Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 5924.2744 3992.8797 2190.4898 4625.2021 3958.5804 3059.1143 2739.813 2679.7165 3855.728 2833.4531 5807.2271 3435.0234 133913228 narG Nitrogen Denitrification Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 1996.5767 2029.5705 1110.3078 1923.2695 2241.2825 1080.2328 2259.1646 1335.6338 1322.7717 1396.5097 1025.4662 2444.2894 121592542 pimF Organic Remediation Aromatics Aromatic carboxylic acid Acidovorax sp. JS42 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax; 5739.4729 3779.0086 5283.2274 5374.1006 4891.2758 4185.7266 3379.3585 4046.6157 3816.0984 4487.8072 6005.4542 5351.1255 224712626 hao Nitrogen Nitrification uncultured planctomycete superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales; 544.2126614 485.4786 529.9078194 689.7092 538.8125643 495.9467 115526618 fnr Stress Oxygen stress Rhodopseudomonas palustris BisA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1744.1435 1363.164 647.6795669 488.0072359 77978679 pulA Carbon cycling Carbon degradation Starch Yersinia intermedia ATCC 29909 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia intermedia; 626.1635795 697.1452 893.803251 479.5359286 817.3456 722.7626 493.4390126 612.3706349 912.4728 708.2321 715.6726768 23126504 tfdA Organic Remediation Aromatics Chlorinated aromatics Nostoc punctiforme PCC 73102 superkingdom:Bacteria;phylum:Cyanobacteria;order:Nostocales;family:Nostocaceae;genus:Nostoc;species:Nostoc punctiforme; 429.1509396 316.5905806 317.0598171 423.1303 209884016 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 2220.708 1671.0332 2221.5898 2240.6274 2320.5578 2654.8989 4612.0183 1952.5248 1925.2299 2333.0453 2158.6565 169759009 amyA Carbon cycling Carbon degradation Starch Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1511.84535 1328.9147 1142.1784 1544.3274 1936.982 1487.55985 1284.0002 1581.5745 1099.69455 1468.3155 1015.0635 1124.0408 33326777 bco Organic Remediation Aromatics Aromatic carboxylic acid Azoarcus sp. CIB superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 1655.1008 2691.9413 2443.5205 1747.585 3058.685 2043.4178 1954.4006 2204.0307 1939.5363 2285.7946 2531.7367 2580.8851 226228129 sigma_24 Stress Sigma factors Gemmatimonas aurantiaca T-27 superkingdom:Bacteria;phylum:Gemmatimonadetes;class:Gemmatimonadetes;order:Gemmatimonadales;family:Gemmatimonadaceae;genus:Gemmatimonas;species:Gemmatimonas aurantiaca; 1776.0452 651.9601 1273.4263 1804.238 1383.7258 2064.813 1961.6426 1171.3937 1574.9607 632.3450653 110833406 narH Stress Oxygen limitation Alcanivorax borkumensis SK2 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Alcanivoracaceae;genus:Alcanivorax;species:Alcanivorax borkumensis; 21459.1336 26711.8108 16146.6222 26380.57 23313.1 18846.7923 13664.9869 18867.2927 18415.1666 17148.1156 43751.9021 18184.9115 225168858 dsrA Sulphur sulfite reductase Dethiobacter alkaliphilus AHT 1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Syntrophomonadaceae;genus:Dethiobacter;species:Dethiobacter alkaliphilus; 1281.6023 545.9943678 966.3524 1425.2138 1027.8343 792.7431 846.3078 715.6167 582.7613 793.3092 867.9607919 815.6603 198248901 hrcA Stress Heat shock Acidithiobacillus ferrooxidans ATCC 53993 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Acidithiobacillales;family:Acidithiobacillaceae;genus:Acidithiobacillus;species:Acidithiobacillus ferrooxidans; 1224.1524 1396.4627 2203.7995 805.785 1685.7564 879.678 973.2104 1019.6085 898.9577182 126731866 pimF Organic Remediation Aromatics Aromatic carboxylic acid Sagittula stellata E-37 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 1373.7479 2665.8572 1598.3547 1340.3439 2387.5933 1028.9328 2040.2782 1425.7259 1305.5778 1357.7063 1936.7674 1845.7375 70930916 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2242.8578 3042.5017 3488.5751 2242.1068 3465.2154 2365.322 2116.6011 3315.8565 2516.6362 2785.8505 4805.8817 3385.7929 150036122 sox Sulphur Sulphur oxidation Thiobacillus plumbophilus superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Hydrogenophilales;family:Hydrogenophilaceae;genus:Thiobacillus; 1661.8304 1595.5845 3045.9641 1580.4478 3550.4195 1443.7155 3078.4829 1392.7902 1283.8176 1643.9024 1185.7103 1460.9983 40740982 endochitinase Carbon cycling Carbon degradation Chitin Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 579.8185 994.5819 973.4331 604.6078405 1032.5223 1339.5047 1014.1565 797.3556992 586.897291 551.9855 16262669 mdlB Organic Remediation Aromatics Aromatic carboxylic acid Sinorhizobium meliloti 1021 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium meliloti; 2159.5642 1306.1501 1834.1416 2060.6556 2066.9739 1849.6086 1880.8345 1650.6193 2386.4191 964.7217149 85375918 alpha_galactosidase_fungi Fungi function carbon degradation Penicillium sp. F63 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium; 600.464 682.8901 802.5374 501.2258 194597049 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria; 5807.2657 7542.5223 6377.062 5534.4849 8385.158 7213.6869 5692.3184 5460.7941 6830.7382 7997.9695 5527.3165 5430.5122 89336465 nifH Nitrogen Nitrogen fixation Desulfitobacterium hafniense Y51 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium;species:Desulfitobacterium hafniense; 505.4708 559.2835 478.934 532.9895344 15881.70665 601.3382 321.0554984 428.0272584 302.4097193 753.8199116 55233010 pimF Organic Remediation Aromatics Aromatic carboxylic acid Haloarcula marismortui ATCC 43049 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloarcula;species:Haloarcula marismortui; 1021.6874 378.0852989 501.8610602 819.6462 537.3346 528.571 388.4403559 501.545 632.892 1198.5634 685.0931 254469657 glnA Stress Nitrogen limitation Pseudovibrio sp. JE062 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pseudovibrio; 425.7391164 455.8150796 549.8597 453.5311537 393.0398477 360.8480401 440.103178 15026920 cytochrome_b Bioleaching Electron transport Acidithiobacillus ferrooxidans 1114.2897 617.5646 891.6678 384.7626454 1053.9992 707.0953 360.1724038 547.8037 658.6858 126035163 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 1381.5655 818.1976795 1520.6033 1006.696 662.0674 652.0646761 826.904327 239624450 pstS Stress Phosphate limitation Clostridiales bacterium 1_7_47_FAA superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales; 3020.1043 2394.3389 2022.5878 3614.3933 2482.4668 2109.0908 1960.1816 2244.81 1898.0311 2306.7652 4427.5903 2573.1125 157910689 alkK Organic Remediation Others Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 761.7187 576.8045 640.9005 647.2765 743.0242 464.5688134 12942.79404 899.2748 630.5453 479.3087 624.1831636 666.9802 83366922 amyA Carbon cycling Carbon degradation Starch Rhodobacter sphaeroides ATCC 17029 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 2768.1994 3743.1638 2049.7767 2657.9225 4097.4084 2524.2325 2735.6722 1837.1018 2420.4859 2031.836 2928.2868 7050.3388 91797657 AceA Carbon cycling Carbon degradation Others Chromohalobacter salexigens DSM 3043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Halomonadaceae;genus:Chromohalobacter;species:Chromohalobacter salexigens; 671.2925 506.3254 485.7788 570.858 1275.5028 474.9558793 570.9822 1562.1653 449.8573009 673.7836 558.4446794 226229027 sigma_24 Stress Sigma factors Gemmatimonas aurantiaca T-27 superkingdom:Bacteria;phylum:Gemmatimonadetes;class:Gemmatimonadetes;order:Gemmatimonadales;family:Gemmatimonadaceae;genus:Gemmatimonas;species:Gemmatimonas aurantiaca; 2021.2652 2054.6733 2030.2471 1313.5356 1024.5057 1281.6374 734.8988 1115.3624 916.2407 1179.631943 1292.5848 315046268 nbaC_fungi Fungi function carbon degradation Arthroderma gypseum CBS 118893 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma;species:Arthroderma gypseum; 14772.2227 6666.4717 9798.3193 11966.1714 10136.4124 7674.2358 7043.1098 5966.8859 8884.8767 7295.5552 14021.3592 6058.0256 4760687 scaffold Bacteria phage STRUCTURAL Vibrio phage KVP40 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses;species:Vibrio phage nt-1 sensu lato; 1029.1289 1221.9728 1122.437407 861.1620963 1846.2606 1256.7918 990.6262 1063.6024 1112.7996 1031.4561 1858.0628 1258.2814 217498390 B_lactamase_C Antibiotic resistance Beta-lactamases Shewanella baltica OS223 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella baltica; 658.7370881 571.3217 366.7172879 36785933 MATE_antibiotic Antibiotic resistance transporter Photorhabdus luminescens subsp. laumondii TTO1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Photorhabdus;species:Photorhabdus luminescens; 1386.7907 644.2763 562.4472942 878.9428 507.2823 447.8484537 611.0281 1363.3001 298247929 phzF soil_benifit Ktedonobacter racemifer DSM 44963 superkingdom:Bacteria;phylum:Chloroflexi;class:Ktedonobacteria;order:Ktedonobacterales;family:Ktedonobacteraceae;genus:Ktedonobacter;species:Ktedonobacter racemifer; 1592.0832 1540.776278 1562.490913 1783.30815 1423.04585 1821.849481 2936.83705 3087.284391 1681.74617 1290.4396 1966.1735 2528.233614 254547564 RNA_dependent__RNA_polymerase Bacteria phage REPLICATION Enterobacteria phage BZ13 superkingdom:Viruses;family:Leviviridae;genus:Levivirus; 628.9037839 932.0287 1164.9036 748.8163 1047.948582 728.0956 1437.0798 690.7586 767.4142 1177.7686 218885642 cytochrome Energy process Energy process Desulfovibrio vulgaris str. 'Miyazaki F' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 861.5256491 758.5403939 818.3259699 1783.6948 218460815 per_bac soil_benifit Rhizobium etli Kim 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 1079.8089 1874.9906 1722.3038 1536.876 2157.1022 2484.9872 739.8316166 1452.3553 547.8245675 1734.7749 3086.633 2550.0971 148806816 tfdB Organic Remediation Aromatics Chlorinated aromatics Bradyrhizobium sp. RD5-C2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1100.4007 1243.0235 1135.214 678.2877 1384.8803 927.2151 1215.1502 603.2164 1083.7005 889.028 1253.0512 893.1153 34102158 obgE Stress Radiation stress Chromobacterium violaceum ATCC 12472 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Chromobacterium;species:Chromobacterium violaceum; 4667.5621 5086.3821 5328.4161 3248.8063 1969.4407 4870.9638 3845.6806 6072.8104 5338.8357 4851.2082 2239.8378 5658.5241 163855423 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bordetella petrii DSM 12804 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella petrii; 1622.2454 946.3641 985.9807 1326.9203 1150.54045 465.2268852 983.58345 557.8647945 519.8105 674.58195 1916.2264 746.4355 163841182 glnA Stress Nitrogen limitation Renibacterium salmoninarum ATCC 33209 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Renibacterium;species:Renibacterium salmoninarum; 904.5981 774.3211 806.3745348 269831604 SMR_antibiotics Antibiotic resistance transporter Vibrio harveyi 1DA3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio harveyi; 521.8208927 518.0613 1338.1282 1874.6613 541.4945173 156973354 AceB Carbon cycling Carbon degradation Others Vibrio harveyi ATCC BAA-1116 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio harveyi; 907.5397 874.8274 1128.962 1103.2945 922.6658 836.9987 600.3402 700.4016 595.4936 804.8442 1249.928 881.7816 227822371 proV Stress Osmotic stress Rhizobium sp. NGR234 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium; 1848.2841 866.7486 925.1329 1895.4635 1200.2144 1080.1431 1094.2482 1050.8687 1111.6813 1388.6373 1259.9703 1387.9971 117607785 gyrB other category gyrB Magnetococcus sp. MC-1 superkingdom:Bacteria;phylum:Proteobacteria;genus:Magnetococcus; 946.6466077 1719.4294 1299.7864 1023.3421 1066.9099 735.8643 1180.6764 2187.0847 904.4790029 1234.1495 2458.3896 1350.9884 117624076 SMR_antibiotics Antibiotic resistance transporter Escherichia coli APEC O1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia;species:Escherichia coli; 21987.77654 1834.6731 1192.6595 2016.9057 850.3526467 1677.6767 2452.5297 1701.5097 1368.9714 1519.1508 1335.5037 801.5297 67528098 tre_fun soil_benifit Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 670.2918 936.3739 550.8156678 797.77125 986.4646 918.8395 1012.0182 519.48515 883.8397 1269.7481 854.77 187713232 gyrB other category gyrB Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 1795.3743 1024.7053 1243.6494 1777.2949 1149.0237 1528.8168 2829.7281 1118.8463 1117.6921 2705.0166 934.9655 1611.34 118172773 ahpC Stress Oxygen stress Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 500.474 546.2224 18906.59804 547.3797968 716.9297 702.0697 1024.6388 706.4614 794.8614 828.7747 148499668 vanA Carbon cycling Carbon degradation Others Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 491.8935619 728.3790155 696.9379744 456.0858012 1129.666 677.3254 724.0811 692.0051 501.574469 849.6341 228564323 type_III_secretion virulence secretion Dethiosulfovibrio peptidovorans DSM 11002 superkingdom:Bacteria;phylum:Synergistetes;class:Synergistia;order:Synergistales;family:Synergistaceae;genus:Dethiosulfovibrio;species:Dethiosulfovibrio peptidovorans; 4070.7114 2156.4609 2497.2875 2846.6744 2272.5658 1728.7225 1861.4344 1549.4437 2180.5061 1889.7653 3759.7543 1876.9923 239801535 fnr Stress Oxygen stress Variovorax paradoxus S110 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Variovorax;species:Variovorax paradoxus; 834.0919 455.509029 554.4484 1849.2908 557.0383 732.5341149 758.1492 28542655 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 594.7989845 695.5524 1048.2097 412.9386626 873.2378 892.1887 914.7683 955.7253 818.5678 719.8497 257063744 hrcA Stress Heat shock Slackia heliotrinireducens DSM 20476 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Coriobacteriales;family:Coriobacteriaceae;genus:Slackia;species:Slackia heliotrinireducens; 1471.5485 892.36115 1006.7285 1340.1042 1389.06085 1383.1425 1006.30025 1637.4781 1102.5835 1625.6229 1059.6292 1275.8313 257388961 endochitinase Carbon cycling Carbon degradation Chitin Halomicrobium mukohataei DSM 12286 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halomicrobium;species:Halomicrobium mukohataei; 3112.3036 3613.0369 4320.4372 2918.7234 4258.3686 3365.6284 3089.6205 3915.3448 3780.0449 5205.3075 2223.7413 3382.8679 89335313 Ni_Fe_hydrogenase Energy process Energy process Desulfitobacterium hafniense Y51 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfitobacterium;species:Desulfitobacterium hafniense; 1181.3571 1426.631 1494.3829 1186.2057 1741.604 1272.7203 978.4334 1672.4715 949.6329 1261.0495 1404.0699 1463.9507 149921526 Catechol Organic Remediation Aromatics Other aromatics Plesiocystis pacifica SIR-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Nannocystaceae;genus:Plesiocystis;species:Plesiocystis pacifica; 4757.9883 4271.8652 5849.1914 3829.0883 4379.5579 3521.9515 3445.1402 8215.2787 4673.728 4365.423 7099.5586 4713.4089 237875773 MATE_antibiotic Antibiotic resistance transporter Burkholderia glumae BGR1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia glumae; 1517.4601 1422.0055 820.2887 1969.6082 2936.0737 1027.6914 2757.7868 1033.7291 1045.0028 1135.1366 1339.684 1142.2568 242372054 narI Stress Oxygen limitation Staphylococcus epidermidis M23864:W1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Staphylococcaceae;genus:Staphylococcus;species:Staphylococcus epidermidis; 439.1714911 816.8105 464.9015674 786.7995 714.1276061 1213.8368 862.3941 671.0813 258635090 proV Stress Osmotic stress Pantoea sp. At-9b superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pantoea; 5790.2873 3849.5387 4982.2164 7100.6051 2563.6894 5375.9629 3322.7988 3513.713 2425.936281 6026.812 3958.0294 2537.6762 237802322 endochitinase Carbon cycling Carbon degradation Chitin Pseudomonas syringae pv. oryzae str. 1_6 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas coronafaciens; 551.3855495 860.1862 1225.1552 604.9649 1025.3317 466.3037301 1065.24575 1387.7427 565.8471 708.7011 998.74 78696499 ppx Phosphorus Phosphorus utilization Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 1293.087 1078.4407 731.7868 1055.7504 1059.3641 1295.9474 1522.7415 1501.886 958.2765 522.6120553 1070.5363 1293.4911 114054545 xylanase Carbon cycling Carbon degradation Hemicellulose Geobacillus stearothermophilus superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 390.5328623 1480.4046 600.379 427.1977646 963.5236 1002.7158 667.0423 503.467 853.9544494 469.7546038 114798640 narG Nitrogen Denitrification Hyphomonas neptunium ATCC 15444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Hyphomonas;species:Hyphomonas neptunium; 794.0637 837.6956 666.3155 621.895 698.9672 1286.3631 6107.0655 642.9514 656.3304 916.9951 425.6739127 254266625 sox Sulphur Sulphur oxidation Methylobacterium extorquens DM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 2052.2804 1825.3583 937.2734 2387.4512 4347.2509 1089.9544 3791.8967 1508.386 1587.0744 1243.6633 1842.1826 1561.1208 213852761 nrfA Nitrogen Dissimilatory N reduction Salmonella enterica subsp. enterica serovar Typhi str. M223 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 2197.9268 1343.4731 2101.4064 2208.8355 653.4202943 1020.288 1636.8932 1912.463 1672.6242 1663.7563 1185.3259 1384.4816 66766503 xylanase Carbon cycling Carbon degradation Hemicellulose Xanthomonas campestris pv. campestris str. 8004 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas campestris; 2313.7266 4413.2821 2772.2583 3215.3707 4773.2148 2676.5773 5777.4504 1756.8504 3574.0218 2368.2253 2986.4024 1484.3158 148549667 iro virulence Iron oxidation Pseudomonas putida F1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 555.5867 733.1192579 941.3299 577.4730844 571.1739724 1004.8382 840.8021 794.585 1201.8441 1005.5165 801.0354 112463359 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 1747.8374 2293.5707 2594.1641 1145.220941 1681.3885 1170.2398 1244.1985 2783.3896 1537.7411 1860.3193 1637.733039 2345.2242 270343973 type_III_secretion virulence secretion Dickeya dadantii Ech586 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Dickeya;species:Dickeya dadantii; 603.0397464 1653.8477 1440.5286 1259.0491 1434.4595 1835.989 1797.0062 1594.3627 1371.04875 2061.1814 2125.4517 169827834 SMR_antibiotics Antibiotic resistance transporter Lysinibacillus sphaericus C3-41 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Lysinibacillus;species:Lysinibacillus sphaericus; 807.1602 842.1555 1030.5442 1109.0064 1620.263 1401.5986 748.8797 676.7983 1092.4722 872.2895 1580.4826 1164.3521 116609039 sped_bac soil_benifit Arthrobacter sp. FB24 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter; 3776.6247 2504.2562 3003.1598 3478.8152 2126.8049 2884.9782 2321.4594 2499.7623 2896.0071 2714.7426 2863.7327 2609.6269 194312211 ahpC Stress Oxygen stress Prosthecochloris aestuarii DSM 271 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Prosthecochloris;species:Prosthecochloris aestuarii; 682.0959877 933.4049 1180.3736 1167.9742 1002.161 1911.0087 1286.3574 1323.4124 916.2407 786.3555 169759744 cytochrome Energy process Energy process Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 1498.1175 923.9394982 1024.9029 1933.3235 1673.3843 2084.6909 1786.6996 1236.4763 1668.9376 219869061 katE Stress Oxygen stress Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio desulfuricans; 1250.923 2093.1941 1837.5002 1609.8838 1470.0845 2442.1225 2231.074 1958.6165 2594.1832 2187.809 968.9602153 2212.35 197715087 ArsC Metal Resistance Arsenic Streptomyces sviceus ATCC 29083 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces sviceus; 1078.9224 1969.5913 2183.2492 934.8561 1072.1238 1991.3699 1618.105 1817.3355 2131.5806 1797.3182 863.8766096 1790.3275 70728715 nitro Organic Remediation Others Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 861.064 1164.8479 863.3547 977.7019 830.8637 1195.0373 1020.8617 925.7711 1175.4359 907.5867 1132.7677 15840506 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium tuberculosis CDC1551 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium tuberculosis; 1670.2793 1288.7183 1399.9053 1885.2177 1326.5987 1691.8403 2106.5761 1746.3681 1535.8424 1677.1002 1158.8508 1381.0898 163854334 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bordetella petrii DSM 12804 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella petrii; 1891.6301 2909.0999 2913.8438 2106.515 1796.1506 3130.71 2927.4544 3173.3408 3834.3406 3294.5381 3596.3098 32481350 cat_bac soil_benifit Vibrio cholerae superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 702.2271 1103.6709 846.0963 767.0751 901.8482 925.8092 991.1194 990.7105 942.6785 1000.86 1164.4245 975.2989 110817071 mhpC Organic Remediation Aromatics Aromatic carboxylic acid Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 560.0762959 974.1046 1068.3759 602.4856 963.3794 1128.5442 1273.0184 1166.2915 1042.2317 920.548 116254841 nmoA Organic Remediation Aromatics Nitoaromatics Rhizobium leguminosarum bv. viciae 3841 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 5101.5462 3719.5137 5550.4632 6195.0344 2578.0166 5045.8178 6185.7905 5747.3144 3889.277 6037.8891 2285.6047 3348.0015 255944213 PAPS_reductase Fungi function Sulfur Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 691.7672975 477.7960422 607.1253 1088.0766 587.6771 490.6251891 404.8821 722.7373 623.3937 15842603 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium tuberculosis CDC1551 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium tuberculosis; 4439.8175 1999.1795 2438.7079 3263.2024 2524.4053 2329.8307 2177.8865 2327.7 2509.6352 3311.2766 2949.6447 2196.1184 72117921 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 3836.5596 5679.6245 3476.958 3807.6928 2742.8381 6405.7631 4576.7585 3984.2787 4560.6401 4102.5089 3164.0163 4411.8328 115520240 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris BisA53 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 9805.3218 3953.76 6820.2837 8822.7128 5746.6732 6057.5658 5751.998 6220.422 4849.1959 5801.9979 5734.3125 7727.22 161579035 xylA Carbon cycling Carbon degradation Hemicellulose Rhodopirellula baltica SH 1 superkingdom:Bacteria;phylum:Planctomycetes;class:Planctomycetacia;order:Planctomycetales;family:Planctomycetaceae;genus:Rhodopirellula;species:Rhodopirellula baltica; 1712.6448 652.7119 1210.6012 1598.9943 1130.6519 900.8322 1299.6915 1049.1378 988.8666 1285.1355 1345.6661 1475.1426 156532368 SMR_antibiotics Antibiotic resistance transporter Enterobacter sakazakii ATCC BAA-894 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Cronobacter;species:Cronobacter sakazakii; 1413.9508 1103.1612 717.6545 1106.1025 2876.2184 870.5756 2541.8139 671.9203 1082.524 995.6565 596.2291097 223690011 ArsC Metal Resistance Arsenic Desulfobacterium autotrophicum HRM2 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfobacterium;species:Desulfobacterium autotrophicum; 761.5978 895.9036 1127.9878 805.2364 917.3003 970.02 721.0999 753.6745 760.2007 1402.1239 1267.6331 163857292 SMR_antibiotics Antibiotic resistance transporter Bordetella petrii DSM 12804 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella petrii; 4393.3552 8970.0326 6752.0935 4316.266197 5671.1763 9177.7915 8456.7694 5926.9418 8845.282 10512.8884 4165.4338 10257.5837 302915188 protease_serine_fungi Fungi function carbon degradation Nectria haematococca mpVI 77-13-4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Nectria;species:Nectria haematococca; 3304.4123 2202.7418 2779.4262 3408.6702 1130.4244 2533.7298 1687.649 1943.0505 1931.4635 1908.9604 2053.6471 1776.293 238029949 ferroxidase_high_affinity Fungi function iron Pichia pastoris GS115 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Pichia;species:Pichia pastoris; 1760.9339 1691.2429 1175.7937 1840.5364 4774.2386 1603.1495 3915.0066 2138.0382 1650.4446 1263.9863 1450.3653 1563.6064 226244453 ppk Phosphorus Phosphorus utilization Rhodococcus opacus B4 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus opacus; 937.3191 1256.0082 1262.5508 1112.4582 741.9611709 1515.3262 1090.3484 1241.9226 1724.7881 1140.88545 728.0614795 149823212 ahpF Stress Oxygen stress Limnobacter sp. MED105 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Limnobacter; 840.9558 1144.0903 1214.2651 916.337 763.8607 1162.3279 1200.9214 939.2673 1279.0998 1248.1857 905.8477 1205.8787 115449907 ara_fungi Carbon cycling Carbon degradation Hemicellulose Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 461.1602885 510.8081 464.6884628 349.3381661 315.4522686 15625034 sox Sulphur Sulphur oxidation Rhodovulum sulfidophilum superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodovulum; 2058.7816 4340.9808 3472.1746 3843.7994 2405.3077 5194.1094 3679.3393 3575.5416 5096.4679 5427.0173 2427.5901 4512.6694 32307941 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2500.45575 1642.3752 1397.19365 1996.1951 1620.82225 1096.071012 2168.870868 989.373 1523.1334 1204.17875 2076.50655 1145.57995 27383060 phn Organic Remediation Herbicides related compound Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 1878.359 1446.7005 463.4621536 1285.3894 1298.0267 1629.6371 929.467 1119.5726 1506.1725 1014.3938 2150.5624 1046.7345 209531311 exaA Organic Remediation Chlorinated solvents Gluconacetobacter diazotrophicus PAl 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter;species:Gluconacetobacter diazotrophicus; 2328.0052 2799.1189 2997.4894 2480.1013 3574.9152 2797.7681 1814.5785 2239.9319 2331.9656 2789.6806 3244.1383 2661.7411 52424943 CopA Metal Resistance Copper Mannheimia succiniciproducens MBEL55E superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pasteurellales;family:Pasteurellaceae;genus:Basfia;species:Mannheimia succiniciproducens; 1265.5239 1605.855 1470.7271 937.0888 1771.6548 1372.0599 1275.3287 1230.3751 1257.4095 1335.552 1739.5495 1405.2724 111152079 glnA Stress Nitrogen limitation Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 6010.8187 3724.3558 4779.1289 3406.4923 2307.9064 4455.4183 3681.7595 5002.2722 4339.4967 3904.3268 2855.9007 4386.7713 77359875 pilin virulence pilin Pseudoalteromonas haloplanktis TAC125 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Pseudoalteromonadaceae;genus:Pseudoalteromonas;species:Pseudoalteromonas haloplanktis; 505.2962 776.595 702.8824 768.2257 710.6792 725.0808 736.618 721.9714 627.5748 648.6367 818.5716 262373601 pilin virulence pilin Acinetobacter junii SH205 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter;species:Acinetobacter junii; 1590.5989 980.6416 982.4767 1696.7398 1513.2364 1013.4381 1203.4448 646.6466 999.8399 1618.0632 2145.5893 1320.9146 148253971 pimF Organic Remediation Aromatics Aromatic carboxylic acid Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 12736.0879 5725.1027 8433.5414 10586.2006 6401.2132 6787.0288 6568.1162 5445.107 7024.029 8037.6327 8946.3299 8209.8159 154151957 pstA Stress Phosphate limitation Candidatus Methanoregula boonei 6A8 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanomicrobiales;genus:Methanoregula;species:Methanoregula boonei; 3385.7314 2339.64145 3074.25065 3985.93865 1886.6887 3162.3351 3596.9888 3438.60595 2768.01445 3474.5804 2614.1051 2364.4014 209883189 ArsC Metal Resistance Arsenic Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 2663.7589 1224.3302 2200.3476 2632.1301 1619.1443 1774.2345 1590.932 1367.8554 2071.6585 2595.295 2480.6364 2187.4533 91781192 akbF Organic Remediation Aromatics BTEX and related aromatics Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 5857.0726 4469.6297 4610.4709 4944.0257 6175.1587 5673.5482 3658.1768 4229.9954 5722.4002 4708.233 5751.418 4481.6755 258526014 phoB Stress Phosphate limitation Desulfurivibrio alkaliphilus AHT2 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobulbaceae;genus:Desulfurivibrio;species:Desulfurivibrio alkaliphilus; 5535.3691 6588.9205 5685.2733 3777.1336 7988.3728 5227.432 19381.32493 3760.1681 5152.0799 4272.3171 6510.8597 3807.17 125714545 ureC Nitrogen Ammonification Clostridium thermocellum ATCC 27405 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium thermocellum; 3704.313136 2713.795125 1942.205356 2884.461551 4436.912255 2236.4661 4447.695625 2339.423833 2760.894636 2333.686937 2459.67495 2397.20805 152986771 pilin virulence pilin Pseudomonas aeruginosa PA7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 560.3180786 853.715 586.3270617 626.4445 385.3806279 556.7257 612.2568 21106440 vanA Carbon cycling Carbon degradation Others Xanthomonas axonopodis pv. citri str. 306 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xanthomonas;species:Xanthomonas axonopodis; 6780.6371 9302.1545 5264.7477 5560.9485 10196.097 7683.2096 5899.9525 5229.3604 8969.0985 7694.9567 4759.5863 5091.5703 199425120 phospholipase_B_fungi Fungi function virulence Yarrowia lipolytica superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Dipodascaceae;genus:Yarrowia; 485.9671 324.4935881 357.0388491 311.4433749 227495998 sigma_70 Stress Sigma factors Actinomyces urogenitalis DSM 15434 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Actinomyces;species:Actinomyces urogenitalis; 2204.7235 1471.0515 1816.5488 1997.3046 1392.1313 1200.5314 1197.9841 1171.2656 1164.1135 1405.5835 1047.3662 169825757 katE Stress Oxygen stress Lysinibacillus sphaericus C3-41 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Lysinibacillus;species:Lysinibacillus sphaericus; 1045.8118 1142.8543 954.43 799.989042 1338.0313 1112.329 754.0184 930.4312 830.6857 820.7675 1914.833 1402.9379 227548396 opuE Stress Osmotic stress Corynebacterium lipophiloflavum DSM 44291 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium lipophiloflavum; 2559.4168 3136.3506 2972.9759 2030.3567 5529.7382 2117.7805 3574.1 1890.5905 2927.2068 2156.0516 2384.8023 2279.222 68262858 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Corynebacterium jeikeium K411 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium jeikeium; 10161.7478 3521.0993 6780.1111 9335.4933 4851.4797 4866.2377 4667.5453 5758.0388 5472.7984 5839.908 8413.4402 4771.6615 302306457 sir Sulphur sulfite reductase Ashbya gossypii ATCC 10895 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Eremothecium;species:Eremothecium gossypii; 1222.8898 1148.4865 1320.6942 1095.35685 1107.35065 704.7552 863.61065 741.65905 808.9837 767.8553 1373.3424 1716.2689 25990736 catB Organic Remediation Aromatics BTEX and related aromatics Streptomyces setonii superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 1086.0012 965.8347 1084.8637 1173.919 456.5074332 671.1574 658.2182 714.4759 629.5309 658.3941957 940.3363 268324869 pstC Stress Phosphate limitation uncultured archaeon superkingdom:Archaea; 840.3830913 1492.4718 976.0938 816.1931896 1617.702 1536.2076 972.5299 1775.4959 1383.5789 1173.2095 67159104 tfdA Organic Remediation Aromatics Chlorinated aromatics Azotobacter vinelandii AvOP superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Azotobacter;species:Azotobacter vinelandii; 1620.2843 1619.3622 769.226 1189.1232 1405.7358 1161.9839 724.1384 1272.7522 990.6101 1008.9669 836.8249087 1149.3426 170722207 fnr Stress Oxygen stress Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 726.8619 617.1984 651.8218035 806.1595 789.5424 688.3628 700.1474 618.6284 551.2093262 685.7248 99030603 ppk Phosphorus Phosphorus utilization uncultured bacterium superkingdom:Bacteria; 2070.1588 2085.8317 1376.8036 935.1242229 1155.068692 1278.0863 900.5407 882.3141676 154246839 merB Metal Resistance Mercury Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 13613.1229 10346.1648 11221.575 14877.4023 4997.6388 12098.4553 8740.5085 9476.3018 11441.2436 11564.3995 9904.9836 8930.1188 119356452 SMR_antibiotics Antibiotic resistance transporter Chlorobium phaeobacteroides DSM 266 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium phaeobacteroides; 1113.1613 897.5729 1093.3257 921.953 664.3409677 978.4404 2080.2175 894.9761 735.3889 954.5696 193934074 CopA Metal Resistance Copper Neisseria gonorrhoeae NCCP11945 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Neisseria;species:Neisseria gonorrhoeae; 1063.0857 978.3765 1125.9639 559.4259 964.42 403.564564 481.0282064 968.3836248 257057702 pstC Stress Phosphate limitation Saccharomonospora viridis DSM 43017 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharomonospora;species:Saccharomonospora viridis; 3657.7757 19111.51892 4374.2479 3207.5083 8088.9342 5220.3278 4143.7688 5700.8098 4282.2072 5281.686 3361.7387 5318.7446 170742380 hrcA Stress Heat shock Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 1219.7063 931.6337 829.5213 1356.233 964.282 595.5550238 730.6076 631.0441 979.6872 1062.8562 828.3765 84667494 gyrB other category gyrB Rhodobacterales bacterium HTCC2654 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Maritimibacter;species:Maritimibacter alkaliphilus; 2709.4018 2796.0224 2634.9764 2166.1403 3247.9391 2528.2857 1939.0649 1970.2366 2166.9701 2326.2841 3465.3328 2394.3586 212171454 alkB Organic Remediation Other Hydrocarbons Marinobacter hydrocarbonoclasticus superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter; 738.8166 507.0020516 696.8479 744.7275 445.2676335 501.5411 153808300 catB Organic Remediation Aromatics BTEX and related aromatics Bacteroides caccae ATCC 43185 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides caccae; 548.9408573 897.9042 596.6006572 707.8744 1171.2064 544.0609016 810.8075 450.17 513.9262624 479.9005 1048.77 538.1277379 111280729 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Acidovorax avenae subsp. citrulli AAC00-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax citrulli; 5950.7763 3087.2832 4667.0731 4618.2301 6086.5797 4800.5197 3783.6037 6104.4751 5851.9247 4439.0434 6274.794 2079.2012 322433772 CysJ Sulphur sulfite reductase Acidobacterium sp. MP5ACTX9 superkingdom:Bacteria;phylum:Acidobacteria;class:Acidobacteriia;order:Acidobacteriales;family:Acidobacteriaceae;genus:Acidobacterium; 797.8785 1560.5807 647.3313 1460.0928 1728.4142 480.7722569 1121.4198 622.9651 280957426 sigma_32 Stress Sigma factors Desulfovibrio aespoeensis Aspo-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio aespoeensis; 8185.1584 3298.9456 5968.2844 7991.6565 3828.7265 2176.0352 3870.743 3144.7868 3021.3031 3734.9764 11390.6651 2545.8676 170123948 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Escherichia albertii TW07627 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia;species:Escherichia albertii; 654.9857 423.5890771 496.6849865 360.0799934 512.6828393 445.5266 1145.4515 753.1853 384.8852 895.9976 583.0755 120402396 CadA Metal Resistance Cadmium Mycobacterium vanbaalenii PYR-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium vanbaalenii; 7530.7369 6455.9519 6486.7479 6709.3627 8231.0359 8526.0712 5662.599 4737.6365 8046.7824 6767.8287 6936.3355 7542.3002 240010684 fnr Stress Oxygen stress Methylobacterium extorquens AM1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium extorquens; 4640.4557 6094.178 6650.1135 4605.012 6406.8442 4825.6912 4320.8462 5817.4223 6320.4799 6253.1894 4345.282 6763.7172 114739728 pstB Stress Phosphate limitation Hyphomonas neptunium ATCC 15444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Hyphomonas;species:Hyphomonas neptunium; 2994.6635 1718.20615 2838.1003 2485.71035 1577.4713 2294.0777 2114.76015 2557.0457 2162.8638 2366.80155 2894.52025 2489.68855 86573698 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Rhodopseudomonas palustris HaA2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 4913.4269 2892.3307 2505.6186 3685.7848 3333.1243 2733.8299 3504.7854 3784.0619 3489.7068 3318.5795 3376.5139 2882.4337 256759264 sigma_32 Stress Sigma factors Thiomonas intermedia K12 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;genus:Thiomonas;species:Thiomonas intermedia; 594.0199068 1001.6158 962.2959 440.3747637 739.5925 428.8684155 508.8308 1094.0084 713.2411 1001.4854 1377.6155 119478299 chnB Organic Remediation Other Hydrocarbons marine gamma proteobacterium HTCC2143 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 398.0415598 550.7715 450.5365088 341.9992877 521.3104808 526.7605 430.6038 462.9279 748.2578 513.2882 421.4443636 38232902 cat_bac soil_benifit Corynebacterium diphtheriae NCTC 13129 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium diphtheriae; 3581.830027 2077.054424 2507.691413 3292.4261 3829.2764 1961.173761 1966.524053 3348.3928 2170.580698 2133.533957 4960.8404 3687.8359 51465172 pmoA Carbon cycling Methane Methane oxidation uncultured methanotrophic bacterium superkingdom:Bacteria; 2772.6411 4547.27 4171.611 2234.4498 6880.9463 3297.4726 3634.5596 3602.4252 3463.4035 3951.1365 3141.8896 2756.9612 167629630 PceA Organic Remediation Others Heliobacterium modesticaldum Ice1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Heliobacteriaceae;genus:Heliobacterium;species:Heliobacterium modesticaldum; 1420.5729 2716.4324 2185.0666 1351.8361 1620.1492 2108.7469 1910.2402 997.3921 2208.7199 1255.38255 1070.9928 1648.4586 291356643 cat_bac soil_benifit Streptomyces albus J1074 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces albus; 2537.2669 2821.6222 2088.0155 2951.1865 2724.4663 3250.0313 1978.6143 1740.3039 2758.4565 2852.0229 2673.1456 2897.7727 254461643 sigma_70 Stress Sigma factors Rhodobacterales bacterium HTCC2083 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales; 761.1277 1085.7167 1073.8864 858.7526 1299.8061 1009.5177 492.5981965 849.0327 1182.0022 1382.7841 1109.4227 212530180 chitin_synthase Fungi function major biomolecule Penicillium marneffei ATCC 18224 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei; 546.2812471 1064.8316 696.3418535 555.7214476 995.6102 940.2719 668.1474309 1504.4951 1164.5602 1066.4542 251788495 MFS_antibiotic Antibiotic resistance transporter Dickeya zeae Ech1591 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Dickeya;species:Dickeya zeae; 1238.6862 1494.5233 1021.8932 1246.4611 1163.7742 1405.218 852.4903 947.9582 1083.7005 1342.4306 1516.8174 1286.2679 237882275 amyA Carbon cycling Carbon degradation Starch Micromonospora sp. ATCC 39149 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Micromonospora; 3988.0625 2280.5479 1348.7797 3906.1369 2601.1724 2312.3618 2049.592 2444.8815 4777.6831 2299.7415 5537.527 2130.7112 161389206 nhh Organic Remediation Aromatics Nitoaromatics Phaeobacter gallaeciensis BS107 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Phaeobacter;species:Phaeobacter gallaeciensis; 7202.1829 9906.3683 9492.1904 7185.8037 12563.8017 8716.8237 8779.8399 7909.6458 9526.1157 6452.9795 10144.533 8206.0258 81159513 INF1_elicitin_Oomycetes soil_borne_pathogen oomycete elicitor Phytophthora sojae superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora; 604.3359706 1609.9794 1350.693918 967.1932 1122.3847 829.1593536 576.9479867 83311377 ChrA Metal Resistance Chromium Magnetospirillum magneticum AMB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Magnetospirillum;species:Magnetospirillum magneticum; 1274.2817 1115.5088 2240.2439 868.0669 1278.0496 1122.7536 1304.7499 2350.2261 1256.6756 1038.9711 1649.9857 1751.1766 219850524 gyrB other category gyrB Chloroflexus aggregans DSM 9485 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus;species:Chloroflexus aggregans; 579.257727 340.6348357 508.0694408 572.1310577 377.1994219 479.7218 856.0686143 544.2954 206603337 gyrB other category gyrB Leptospirillum sp. Group II '5-way CG' superkingdom:Bacteria;phylum:Nitrospirae;class:Nitrospira;order:Nitrospirales;family:Nitrospiraceae;genus:Leptospirillum; 885.269 702.7392 935.1216 959.402 996.4563 425.4434507 808.7428 670.6856 628.0175 503.6404 998.2703 820.7275 33391371 nosZ Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2731.6591 3274.5564 2592.6229 2541.3977 3057.6612 2437.7553 4378.0253 1496.2454 2445.9971 2250.1848 2736.4984 2097.218 257797584 fnr Stress Oxygen stress Desulfohalobium retbaense DSM 5692 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfohalobiaceae;genus:Desulfohalobium;species:Desulfohalobium retbaense; 755.8891 2140.2268 1808.8429 1473.1414 1691.1527 2164.7582 1710.5321 1821.8262 2109.669 2273.3551 2411.7437 ieghzo114 hzo Nitrogen Anammox 495.2622 710.3847 1659.370463 593.4134688 726.2175 546.9234 559.4111 470.3244219 472.7205 920.2144 779.915 256847747 glnA Stress Nitrogen limitation Lactobacillus coleohominis 101-4-CHN superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus coleohominis; 849.1092 780.4290058 371.8772224 1057.659043 146188547 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 916.6468 509.1937765 1039.9803 848.5069 1209.0306 754.6793 587.1166066 785.1921 574.5255 643.5002 1082.2123 829.0493 91803943 ureC Nitrogen Ammonification Lactobacillus reuteri 100-23 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus reuteri; 559.8582 1400.8783 844.1189 1025.6022 925.1116 1738.9078 1028.9368 1056.2551 1203.7545 1132.613 1082.2844 1080.214 91188522 sigma_32 Stress Sigma factors Vibrio alginolyticus 12G01 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio;species:Vibrio alginolyticus; 1336.0032 3531.4081 2209.9146 2233.6417 860.2495071 2518.6837 2742.9099 2150.4451 1657.9815 2013.456 1353.426 950.8553 94471099 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2691.1406 2735.06845 2473.08655 2835.6616 3473.85145 2812.7767 2574.09115 1823.36945 2702.71635 2911.1716 4995.9403 3088.8103 158521900 pcc Carbon cycling Carbon fixation Desulfococcus oleovorans Hxd3 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfococcus;species:Desulfococcus oleovorans; 1622.776 2072.01473 1947.403239 1594.02205 1467.21902 2185.2408 2348.0875 1855.111057 2210.577203 2614.09935 2004.4928 2580.629214 162452285 cadBD Metal Resistance Cadmium Sorangium cellulosum 'So ce 56' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Polyangiaceae;genus:Sorangium;species:Sorangium cellulosum; 4161.62795 3188.46765 6285.0125 4353.0529 1802.75795 2201.7226 2311.486 3294.2746 2760.09315 2898.13475 3707.2005 3224.35545 161611252 catB Organic Remediation Aromatics BTEX and related aromatics Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 950.0584308 1449.6058 1520.5539 1143.6748 1308.3407 1037.084 1090.2681 2220.202 1455.4647 1167.9101 2339.9483 1836.7703 120325752 ureC Nitrogen Ammonification Marinobacter aquaeolei VT8 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter hydrocarbonoclasticus; 8468.5799 2612.3513 6188.5721 7101.2215 4289.3105 3890.3698 4699.2146 3360.5213 4373.267 5781.4739 6649.9382 4756.1577 83576882 fnr Stress Oxygen stress Rhodospirillum rubrum ATCC 11170 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum rubrum; 5075.904 5049.7727 6176.388 6160.229 4523.347 6676.3373 4743.9829 5028.4698 5724.5552 6553.9131 6273.1603 5958.672 170654540 amyA Carbon cycling Carbon degradation Starch Methylobacterium radiotolerans JCM 2831 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium radiotolerans; 7324.9138 10794.9067 12141.0811 3338.739282 3068.9421 11337.3598 5325.772522 6690.673606 12258.3388 4360.581325 2544.3977 13247.5005 18181972 dsrB Sulphur sulfite reductase Thermodesulfobium narugense superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermodesulfobiaceae;genus:Thermodesulfobium; 1091.1592 590.6698778 1078.7623 871.9096011 789.363 747.0674 640.8123 584.1476 567.9591 988.4682 87281000 nirK Nitrogen Denitrification nitrifying uncultured bacterium superkingdom:Bacteria; 1406.3212 1187.4915 1513.3424 1541.0811 1680.9903 1094.0525 1017.629786 1391.604 998.3488 980.7828 1479.8195 1482.8739 110667992 atzA Organic Remediation Herbicides related compound Haloquadratum walsbyi DSM 16790 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Haloquadratum;species:Haloquadratum walsbyi; 629.6255 1264.9789 1788.4294 863.5879 1158.9964 800.7447 1259.6604 1814.3094 943.6454 1412.7122 1131.1264 1369.4859 162282629 hmgC Organic Remediation Aromatics Aromatic carboxylic acid Hoeflea phototrophica DFL-43 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Hoeflea;species:Hoeflea phototrophica; 2966.78475 3913.8163 2753.5387 3292.46035 4348.011148 2873.07295 3324.7602 2497.7227 2714.69725 2771.72495 3534.6558 2774.7446 192285851 katE Stress Oxygen stress Rhodopseudomonas palustris TIE-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 4662.8877 3196.7631 2526.5264 4592.8623 2368.2356 3605.4226 5336.5922 5210.853 2955.9991 5157.0572 2331.3235 1852.384 111150139 alkK Organic Remediation Others Frankia alni ACN14a superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Frankiaceae;genus:Frankia;species:Frankia alni; 648.4979 1123.8424 9872.420396 665.4121 581.9998483 759.3606 858.191 1011.1546 885.2842 1253.6796 1054.2957 1014.2163 83972372 nosZ Nitrogen Denitrification uncultured alpha proteobacterium superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria; 1722.1951 676.5277 1034.1791 2113.6103 1327.6225 1493.7563 928.5672 658.6775 985.8412 714.7275 157912660 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 3110.1141 5366.285 3855.857 4620.6135 3345.3911 5833.2813 4484.0446 4226.6667 7036.5982 5515.0424 3512.8295 5529.8932 84043013 Catechol Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 2173.1576 3789.2282 3565.4454 2522.4403 4958.1271 2902.9856 2720.153 3044.5029 2696.4841 3219.7899 2369.883 2959.3898 302690834 p450aro Fungi function organic remediation Schizophyllum commune H4-8 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Schizophyllaceae;genus:Schizophyllum;species:Schizophyllum commune; 643.125 432.0740761 1099.926 156868870 ara Carbon cycling Carbon degradation Hemicellulose Clostridium leptum DSM 753 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium leptum; 1132.7994 3029.7464 1918.4851 1575.6674 1371.0019 2166.3734 2170.5456 1967.4042 2028.4642 2881.3683 839.1072458 1763.7279 50555488 ahpC Stress Oxygen stress Yarrowia lipolytica superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Dipodascaceae;genus:Yarrowia;species:Yarrowia lipolytica; 3144.259 2887.29735 1651.7437 1954.339369 1557.213 2399.09325 2135.47535 1235.2047 2277.07 2325.10045 1562.8245 2397.53075 254486307 glnA Stress Nitrogen limitation Roseobacter sp. GAI101 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 3113.7946 3701.2026 4735.4814 2442.0632 970.2163 3699.8715 3254.4477 5320.9414 5112.9395 3354.8034 853.0655391 4553.4271 194562586 ChrA Metal Resistance Chromium Burkholderia dolosa AUO158 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia dolosa; 4312.0764 5385.7684 4318.14 4796.8732 6117.7682 4386.2904 5716.0732 2844.9761 4862.4641 4272.5516 4410.4687 3845.6893 118037934 ChrA Metal Resistance Chromium Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 1446.0137 2048.85 1421.54 1661.2906 2418.3918 1850.3198 1420.6664 2498.4522 1995.009 1981.3582 147848222 glnA Stress Nitrogen limitation Synechococcus sp. WH 7803 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 773.66 16810.4795 599.62488 621.8393009 422.3567149 378.1000641 685.7205 753.1712474 922.3607 116067484 sigma_70 Stress Sigma factors Synechococcus sp. RS9916 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 1763.8017 1096.8282 1289.60875 1717.5053 747.8765357 1384.683 1066.5763 1314.5845 1237.9849 1390.1448 1646.31 1290.92315 118424473 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 483.5923543 574.9938361 441.1105 515.2305 481.207 151302326 APS_AprA Sulphur adenylylsulfate reductase Desulfobacca acetoxidans superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Syntrophobacterales;family:Syntrophaceae;genus:Desulfobacca; 663.3271 1366.9831 1191.209398 878.7784 1336.4861 979.81635 855.1437 690.334685 893.5724 1030.07145 1069.959639 1065.02605 126105507 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 1115.9687 850.0813 659.1642676 857.0541 643.2402 666.8411 810.6239 568.5982 725.787 922.4604 691.3078993 644.3470977 134096626 gyrB other category gyrB Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 1881.341 1097.2869 1017.8221 1729.6002 1757.6248 1008.2034 1848.4616 925.3353 712.4606 791.6564308 1064.6503 1498.8858 91781011 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 9776.5095 8967.3566 4544.5634 9804.0445 7216.7197 5060.3104 5046.946 5258.7859 6887.4919 5388.8727 11836.6579 5707.2053 84392475 pcpE Organic Remediation Herbicides related compound Oceanicola batsensis HTCC2597 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola batsensis; 1476.0214 1331.0618 1641.7115 1893.9294 975.9593508 1842.5698 2254.5879 2308.0911 1725.7317 1223.653 1426.7011 1677.1729 295433198 pcbC soil_benifit Caulobacter segnis ATCC 21756 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter;species:Caulobacter segnis; 1572.331 3149.7176 1814.775 1442.2261 2861.2214 1583.7961 2559.0766 1332.6078 1860.1022 1495.1653 1658.5865 1034.7737 262395573 SMR_antibiotics Antibiotic resistance transporter Vibrio sp. Ex25 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 1688.2651 2713.8457 2776.3729 1766.241 2162.6953 2980.3395 2400.8907 2337.9281 3506.8424 2665.9675 1562.1758 2999.4745 114317214 iuc virulence aerobactin Granulibacter bethesdensis CGDNIH1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Granulibacter;species:Granulibacter bethesdensis; 1547.2529 1375.3932 1565.1756 1549.3818 2022.736 1838.0081 1156.7343 1621.1736 1440.4609 1356.0648 2105.0358 1783.7359 145702666 PGK Bioleaching Carbon fixation Metallosphaera sedula DSM 5348 1777.9257 1633.6211 1957.7563 1932.0359 1750.6477 1872.7366 1337.4859 1423.1235 1515.3053 1604.563 4149.986 1992.7011 71906728 fnr Stress Oxygen stress Dechloromonas aromatica RCB superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Dechloromonas;species:Dechloromonas aromatica; 4131.909 1672.7152 2256.8626 4204.5511 1825.0828 2807.7888 4442.9697 3334.0129 2300.7931 2231.6931 2195.8247 2409.574 68562084 CODH Carbon cycling Carbon fixation Rubrobacter xylanophilus DSM 9941 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Rubrobacterales;family:Rubrobacteraceae;genus:Rubrobacter;species:Rubrobacter xylanophilus; 885.0406 1860.4768 1187.9341 1024.5064 2123.5438 1157.6017 1276.4413 1664.1196 1284.2137 1621.1116 791.9709783 1213.6512 116065830 fnr Stress Oxygen stress Synechococcus sp. BL107 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 1009.7192 1368.9327 1257.1275 1095.2815 1423.4251 1030.7724 1064.5977 1320.5156 957.065 1171.6397 1399.8175 1237.0512 223951425 amyA Carbon cycling Carbon degradation Starch Pectobacterium carotovorum subsp. carotovorum superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Pectobacterium;species:Pectobacterium carotovorum; 3207.955 2013.706 3187.7968 3401.3283 858.5067 1321.6124 1544.1909 1778.3113 2390.8626 2135.8403 1521.0937 1944.3632 170605688 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 936.849 1144.702 724.6916 1001.7822 25230.39587 825.3179 1834.0435 1065.9264 766.3602 901.8806 804.2715741 1754.0466 150259920 tutFDG Organic Remediation Aromatics BTEX and related aromatics Victivallis vadensis ATCC BAA-548 superkingdom:Bacteria;phylum:Lentisphaerae;family:Victivallaceae;genus:Victivallis;species:Victivallis vadensis; 1951.283 1501.073 1988.8853 2751.4355 1043.682694 1773.1128 1549.1689 1168.4859 1459.4952 1913.4716 1644.388 1546.798 87135439 pimF Organic Remediation Aromatics Aromatic carboxylic acid Novosphingobium aromaticivorans DSM 12444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium;species:Novosphingobium aromaticivorans; 1234.6296 1672.0016 1294.305 1242.749 2272.6795 1599.9489 1338.2429 765.7526 1899.627 1775.1863 1424.5148 1922.6249 254569938 per_fun soil_benifit Pichia pastoris GS115 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Pichia;species:Pichia pastoris; 3790.0301 1830.6295 2822.3613 4030.1543 3687.3074 2784.0233 2039.4409 2697.8971 1765.8972 2299.9201 6202.9604 3035.9339 91683003 mdlC Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 10336.4886 4029.7821 5600.5226 8251.0876 7011.5017 4385.1537 4210.2847 3586.738 4620.4691 4550.3394 10175.6688 4109.8447 33602137 sigma_70 Stress Sigma factors Bordetella bronchiseptica RB50 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella bronchiseptica; 286.1901756 419.8969948 387.2234 445.2909313 452.0066105 9106794 linC Organic Remediation Pesticides related compound Xylella fastidiosa 9a5c superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Xanthomonadales;family:Xanthomonadaceae;genus:Xylella;species:Xylella fastidiosa; 14109.4194 11016.1174 17795.7342 16192.7208 9752.2353 9496.7343 8413.6299 13867.1146 13804.4905 10901.358 12478.5232 13494.3944 196229458 sigma_24 Stress Sigma factors Chthoniobacter flavus Ellin428 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Spartobacteria;genus:Chthoniobacter;species:Chthoniobacter flavus; 3348.2284 1964.3732 1702.5665 1788.798181 3627.11085 2119.87377 2105.555046 1946.20365 1989.41115 2538.48015 2287.2864 2555.22615 198262691 SMR_antibiotics Antibiotic resistance transporter gamma proteobacterium HTCC5015 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria; 2147.8243 3067.4261 2987.0065 2485.8953 2303.9438 3705.5998 2516.4762 2615.2854 3389.3163 2970.3872 2121.0842 3400.3629 257219392 dsrA Sulphur sulfite reductase uncultured bacterium superkingdom:Bacteria; 980.3159 1557.4461 1389.1897 1200.7935 1697.6937 1317.0806 1825.7964 1264.5386 1050.9974 1961.1524 1154.8493 209518806 nmoA Organic Remediation Aromatics Nitoaromatics Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 1857.2703 1467.318 1215.9663 1872.0544 717.1811012 1342.955 1081.2525 794.3429 1454.3115 1913.6391 1146.4863 148654464 sigma_70 Stress Sigma factors Roseiflexus sp. RS-1 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus; 1151.1344 1153.8247 572.9508385 614.3315379 567.814 813.2022 118571995 CopA Metal Resistance Copper Mycobacterium ulcerans Agy99 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium ulcerans; 727.5604 804.3101 940.0795 582.0069583 735.63 8946.227603 892.5902 928.3493 1098.2384 861.4469 911.2512 148261988 Fe_S_cluster_binding_protein Bioleaching Electron transport Acidiphilium cryptum JF-5 1005.5418 2159.3916 1184.59 1014.0004 26050.12892 1445.8991 1806.7329 1106.3184 1569.0535 1164.8059 1215.8131 1623.2597 121638950 SMR_antibiotics Antibiotic resistance transporter Mycobacterium bovis BCG str. Pasteur 1173P2 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium bovis; 1761.001 1740.4292 2039.2792 2346.3723 1099.2928 2179.176 3298.501 1343.9616 2053.0435 1646.2473 1517.7063 1758.9491 68264127 mer Metal Resistance Mercury Corynebacterium jeikeium K411 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium jeikeium; 1329.3004 3514.9319 1793.3874 1861.5347 2772.5856 3091.4647 3000.5198 1524.7147 2496.7515 2825.1899 1004.5888 2365.809 189194617 endochitinase_fungi Fungi function carbon degradation Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 4804.5044 1385.549 2922.1749 3399.5202 2179.1521 1805.7474 2083.8995 1464.387 2488.8651 3381.7927 2782.8659 1680.7845 85708633 hrcA Stress Heat shock Erythrobacter sp. NAP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 1524.1225 2607.9041 3038.9124 1229.572 1242.0392 2845.5086 1984.3838 2672.2724 3043.2147 2431.7847 1091.317509 2833.2719 220903845 pstB Stress Phosphate limitation Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio desulfuricans; 997.1197 785.4893 1028.7849 1133.388 1167.42055 1140.77145 1145.0158 783.7637 1003.2497 918.5325774 1023.9938 154686985 ara Carbon cycling Carbon degradation Hemicellulose Bacillus amyloliquefaciens FZB42 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus amyloliquefaciens; 488.6832243 589.4579 390.6802181 473.0334243 475246 strR soil_benifit Streptomyces glaucescens superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 3546.9862 3333.771 4218.2246 3343.9631 4589.0608 3774.7128 3433.2915 4096.9815 2958.725 2981.1517 5796.9446 4262.2326 27350938 pcpE Organic Remediation Herbicides related compound Bradyrhizobium japonicum USDA 110 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium;species:Bradyrhizobium japonicum; 1390.189 1873.9202 2070.2774 1644.607 948.6972 2197.5124 2590.3215 1611.3571 2704.5801 2259.0286 1058.451855 2213.7232 209874150 NiR Nitrogen Assimilatory N reduction Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 3593.247545 6811.046549 11282.9461 10279.3486 7566.8517 7773.79528 6070.461793 5703.728137 7568.017939 7107.544052 7846.4835 14202.654 196243766 ArsC Metal Resistance Arsenic Cyanothece sp. PCC 8802 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 2294.2632 3177.662 2500.4717 2536.5214 2539.9331 3137.8292 2894.3399 2729.0535 3603.9945 3569.8134 2095.9785 3255.2532 126436666 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium sp. JLS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 1107.3855 2952.7176 1422.3979 993.9198 3526.3409 2105.8453 1743.4975 2301.8574 2288.0258 2463.1736 1268.9239 84689908 nasA Nitrogen Assimilatory N reduction Parvularcula bermudensis HTCC2503 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Parvularculales;family:Parvularculaceae;genus:Parvularcula;species:Parvularcula bermudensis; 2450.1048 3221.713 3023.9658 4143.1588 4237.4372 3852.0966 2204.9448 2808.4454 4855.6261 2468.835 5945.6329 4503.2216 134099599 pcpB Organic Remediation Herbicides related compound Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 1379.3223 592.3518993 1125.6179 1324.3726 1031.1333 971.6053 716.1322 1491.779 1036.103 865.6008 1605.7084 1318.1544 116700521 dsrA Sulphur sulfite reductase Syntrophobacter fumaroxidans MPOB superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Syntrophobacterales;family:Syntrophobacteraceae;genus:Syntrophobacter;species:Syntrophobacter fumaroxidans; 6298.326326 4779.731641 6817.543401 5631.71 4286.866753 5545.59391 4334.845496 6436.9606 5235.459258 5121.105702 5539.940899 6012.997624 119376333 nmoA Organic Remediation Aromatics Nitoaromatics Paracoccus denitrificans PD1222 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Paracoccus;species:Paracoccus denitrificans; 4065.7549 2071.468 2847.2093 3354.7019 2487.529 2915.9228 3424.3447 3080.1379 2340.3878 2347.1319 2630.598 2640.1813 165880077 exoglucanase Carbon cycling Carbon degradation Cellulose uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 2211.8292 2100.2789 1866.2448 2184.3306 2882.2096 2008.9435 3258.1985 1954.9974 2186.8548 2465.4292 2270.0127 1645.5061 15890500 cellobiase Carbon cycling Carbon degradation Cellulose Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 1328.1856 863.3336 1720.6173 636.4418 1165.2294 1078.4996 1669.3244 1099.9392 1320.7118 1429.153 158510763 pstC Stress Phosphate limitation Desulfococcus oleovorans Hxd3 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfococcus;species:Desulfococcus oleovorans; 1196.3341 1796.9551 18159.93486 775.2388 1784.8128 1075.9703 2350.6855 599.8756 1415.6137 1564.6094 1061.5031 1533.9308 6714769 hrcA Stress Heat shock Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 8777.3884 4673.982 6198.7497 8809.7549 6951.3621 6140.6181 5458.1308 4965.3057 5733.7346 6297.5984 12005.8631 5825.3035 148570414 nifH Nitrogen Nitrogen fixation Roseiflexus sp. RS-1 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus; 487.082 1041.6657 568.2903 648.8887559 1279.8595 744.2505 527.6034571 108759259 phoB Stress Phosphate limitation Myxococcus xanthus DK 1622 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Myxococcus;species:Myxococcus xanthus; 2192.5942 2374.04 2621.9781 2792.0761 3381.0161 2410.2207 2188.5883 1983.1277 2684.1479 2755.3214 2883.6011 3079.1496 260653912 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae; 6921.111663 476.7546159 560.3883 698.5371 260850324 per_fun soil_benifit Lactarius rufus superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Russulales;family:Russulaceae;genus:Lactarius; 1717.3461 818.3113 1659.9209 1021.16 1429.7325 579.2084 896.4091 828.4177 149130714 sigma_24 Stress Sigma factors Bacteroides caccae ATCC 43185 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides caccae; 1087.64 547.5221 821.9026 930.5961 763.1296 689.5671 780.7377 681.8355 608.136 453.3323 118470455 trzE Organic Remediation Herbicides related compound Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 2016.2147 2293.112 1681.8114 2399.9159 2062.7596 1732.7607 1872.2738 1554.8059 2000.7281 2243.2504 2030.2712 1103.7375 117927612 pcc Carbon cycling Carbon fixation Acidothermus cellulolyticus 11B superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Acidothermaceae;genus:Acidothermus;species:Acidothermus cellulolyticus; 5725.4496 8432.9339 7344.9846 4774.1353 9692.0198 5558.9979 5331.7862 5967.9147 6127.3871 5858.8128 4389.7515 4668.82 2385506 sigma_70 Stress Sigma factors Synechococcus elongatus PCC 7942 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus;species:Synechococcus elongatus; 557.6719008 839.0816 722.153 416.4303102 110817069 xylJ Organic Remediation Aromatics BTEX and related aromatics Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 11746.4097 6568.3667 9244.6847 10400.106 6137.4102 7097.3868 7100.7706 8886.0007 8683.3501 9501.4761 6387.7817 7298.194 269794708 nplT Carbon cycling Carbon degradation Starch Sanguibacter keddieii DSM 10542 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Sanguibacteraceae;genus:Sanguibacter;species:Sanguibacter keddieii; 4685.4405 6986.4882 6667.212 6279.959 5130.8295 8139.2418 6098.4906 6059.9314 8310.0134 8097.8757 6157.9143 7224.0805 302472222 sid_bac soil_benifit Streptomyces viridochromogenes DSM 40736 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces viridochromogenes; 7242.8425 2150.2552 5477.3586 5985.517 3487.9478 2734.2786 4500.6191 4193.0289 3985.9282 5463.6656 4165.4338 3117.504 187717114 MFS_antibiotic Antibiotic resistance transporter Burkholderia phytofirmans PsJN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phytofirmans; 980.4502 1915.2698 873.942249 1313.442 1459.2965 2057.7609 1454.0119 1423.4746 1815.2887 1760.5918 1522.0523 73542293 SMR_antibiotics Antibiotic resistance transporter Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 3255.3575 4686.2149 4965.5397 2986.307 2870.5116 5178.7343 4266.3971 4746.4484 5718.16 4130.2687 1711.729 5502.7306 71906025 pimF Organic Remediation Aromatics Aromatic carboxylic acid Dechloromonas aromatica RCB superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Dechloromonas;species:Dechloromonas aromatica; 880.5811 732.1872 1011.7677 502.4877 588.4266 719.097 302423302 exopolygalacturonase_fungi Fungi function carbon degradation Verticillium albo-atrum VaMs.102 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Plectosphaerellaceae;genus:Verticilium;species:Verticillium albo-atrum; 728.1421683 696.1131 830.3091105 1021.8217 1005.7655 1269.261 817.4786661 890.4913 625.0307077 836.4236 89052699 grpE Stress Heat shock Jannaschia sp. CCS1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Jannaschia; 686.6322 912.3924 650.0895 626.1002 1377.979 847.9916 717.5774 884.1203 641.9612 733.8032 770.5221 145620278 hydrogenase Energy process Energy process Geobacter bemidjiensis Bem superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter bemidjiensis; 1864.6849 1204.0823 1480.0324 873.7514 1549.0227 1165.6504 16565.99891 1457.445 1530.9649 1339.3434 227502452 katA Stress Oxygen stress Corynebacterium accolens ATCC 49725 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium accolens; 3960.1636 4058.8606 5971.6139 2936.1192 2121.3256 5201.4679 4072.8714 4985.0841 5090.026 5103.5699 2032.8178 5549.9973 20086261 dsrB Sulphur sulfite reductase uncultured delta proteobacterium superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria; 7871.7829 3997.4798 5755.0192 7610.9749 3739.503 4664.7316 4389.9314 5572.6013 11363.118 5883.9484 4896.2622 3939.495 187479755 sigma_32 Stress Sigma factors Bordetella avium 197N superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Alcaligenaceae;genus:Bordetella;species:Bordetella avium; 1127.22495 751.1991 1067.8671 1055.3258 498.8035057 696.70165 811.773 657.9086 996.4605 839.4676148 766.12085 254489137 MFS_antibiotic Antibiotic resistance transporter Roseobacter sp. GAI101 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter; 3013.2001 1871.4736 2962.2457 1338.0701 1097.6054 2359.8031 2214.2472 2909.8792 2734.2966 2474.7197 804.7520661 3515.6323 2414562 ppk Phosphorus Phosphorus utilization Mycobacterium leprae superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 1898.6687 2000.7086 2567.5423 2170.4961 2370.1695 2331.7002 1606.543 1995.7525 1997.0354 2047.7929 3090.6451 2459.2576 159045339 fccAB Sulphur sulfide oxidation Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 2787.4435 1374.5394 1238.637355 2234.4224 1515.7959 1519.113996 3075.5924 4429.5585 1383.6141 1911.3165 2178.694984 1392.8446 148537347 cbdA Organic Remediation Aromatics Chlorinated aromatics uncultured soil bacterium superkingdom:Bacteria; 834.1591 1539.7722 1403.0894 1294.2654 1292.5663 1744.3219 1444.159 1394.2185 1655.011 1428.8812 1256.9432 1761.6818 108771904 arsB Metal Resistance Arsenic Mycobacterium sp. MCS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 6233.6202 3151.5652 3205.753 5864.9651 2493.7667 1568.6155 2505.9006 1671.5637 1815.277 2234.0716 7693.3027 1674.4539 177842341 GcdB Organic Remediation Aromatics Aromatic carboxylic acid Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 642.4578 1033.6124 1666.574 1693.3565 490.2737752 1177.4188 933.5274 1027.4228 1097.0968 1094.9374 990.4864 818.6814 118424460 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1895.6061 1019.8286 1454.0745 758.7024116 612.969 941.4219 408.5386452 514.7957 1310.1097 169762163 sdsA Organic Remediation Others Pseudomonas putida W619 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 3087.7896 1358.7769 1884.0265 2663.2372 1404.693 1940.4138 2440.6006 2266.8761 1343.1457 2169.4067 1330.2114 227981326 glnA Stress Nitrogen limitation Tsukamurella paurometabola DSM 20162 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Tsukamurellaceae;genus:Tsukamurella;species:Tsukamurella paurometabola; 4401.0653 1747.119 2526.5991 3873.7833 2728.1445 2050.2877 2180.995 3152.2189 2707.9933 3109.3537 5122.55 1980.0261 15159901 nmoA Organic Remediation Aromatics Nitoaromatics Agrobacterium tumefaciens str. C58 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Agrobacterium;species:Agrobacterium tumefaciens; 2010.1702 822.4045 1746.8901 2032.9045 1705.031 1320.0569 1662.5407 874.3763 1905.6262 1899.5247 2103.9306 1480.2648 117999662 pbrA Metal Resistance Lead Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 4354.23365 4277.2701 4947.7361 3421.6006 5595.52775 4309.24305 3534.33845 3854.1618 4072.51475 3634.23825 4202.0353 4254.0069 113936031 nmoA Organic Remediation Aromatics Nitoaromatics Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 1031.184 1113.6866 1221.6221 926.528 1188.8005 992.9317 1883.9816 882.7913 1394.9732 221208445 Catechol Organic Remediation Aromatics Other aromatics Burkholderia multivorans CGD2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 1998.9542 1350.3693 1701.1641 977.8173821 1070.1523 895.561 990.0932 933.2429 1508.1518 1220.8342 1150.4138 150858265 ara_fungi Carbon cycling Carbon degradation Hemicellulose Botryotinia fuckeliana B05.10 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Leotiomycetes;order:Helotiales;family:Sclerotiniaceae;genus:Botryotinia;species:Botryotinia fuckeliana; 1505.1561 1568.0606 2053.8332 1368.9991 2573.5674 1861.654 1296.216 1787.329 1408.8224 1713.8713 2163.0552 1840.4094 33520805 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 2573.0103 871.1575 2217.3442 2224.889 1724.8879 1033.2402 1269.6968 943.4191 1492.9626 1736.8631 2699.3804 1381.3507 256686479 amyA Carbon cycling Carbon degradation Starch Jonesia denitrificans DSM 20603 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Jonesiaceae;genus:Jonesia;species:Jonesia denitrificans; 4630.2203 6701.1442 7882.6403 3779.3526 8461.6787 7934.909 4977.5512 8001.8078 5677.5401 5420.1053 7545.3832 6862.6039 206676713 nagG Organic Remediation Aromatics Aromatic carboxylic acid Rhodobacterales bacterium HTCC2083 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 4930.5531 5099.0227 3030.3487 5685.4864 4797.1038 6477.5384 7600.3564 8825.3704 5007.2836 3936.0953 3458.6059 4121.4898 194291937 phn Organic Remediation Herbicides related compound Cupriavidus taiwanensis superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus; 988.6574 1679.3286 2196.7563 1029.1224 1727.9531 930.5354 1916.3768 2393.5957 1552.5586 1954.4302 1020.9015 1704.1295 269218096 cda Carbon cycling Carbon degradation Starch Actinomyces sp. oral taxon 848 str. F0332 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Actinomyces;species:Actinomyces sp. oral taxon 848; 1306.479 472.6607796 838.6981892 511.6807753 998.9307 1157.3137 664.9213 918.4405 677.4991 83840222 ArsC Metal Resistance Arsenic Sulfitobacter sp. NAS-14.1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sulfitobacter; 1067.1557 3215.7877 2647.146 1248.1048 1944.8881 2226.0191 2373.798 2327.2037 2130.2992 2064.3192 1697.0499 2843.4384 56698487 catB Organic Remediation Aromatics BTEX and related aromatics Silicibacter pomeroyi DSS-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria pomeroyi; 12486.1666 6196.4243 6255.2502 9758.2263 6770.052 7723.0831 12731.2951 12066.604 6840.6864 7486.6801 8090.9099 7340.1463 226716973 MFS_antibiotic Antibiotic resistance transporter Laribacter hongkongensis HLHK9 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Laribacter;species:Laribacter hongkongensis; 1003.1105 564.3423 683.2104 945.2525 594.1236 639.3275 723.0003 522.6645 721.7658 1128.2194 746.9162 86211712 merG Metal Resistance Mercury Streptomyces sp. NRRL 30748 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 907.0562 1845.1347 1322.2354 859.4649 2008.1182 1091.9287 1074.118 1415.0984 1044.7232 1416.6428 903.9256198 1398.9418 780816 xylanase_fungi Fungi function carbon degradation Hypocrea jecorina superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Hypocreaceae;genus:Hypocrea; 1449.9493 1123.5111 1661.6015 1077.6117 1167.5661 1175.4147 1197.1362 1691.8021 1316.8657 1511.5241 1109.264 1554.5705 154684524 gyrB other category gyrB Bacillus amyloliquefaciens FZB42 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus amyloliquefaciens; 1156.776 521.9491061 664.3694205 676.8632 1010.712119 916.1474 603.4028 646.0131633 621.6472743 905.2469729 562.5849686 94968370 sigma_24 Stress Sigma factors Candidatus Koribacter versatilis Ellin345 superkingdom:Bacteria;phylum:Acidobacteria;genus:Candidatus Koribacter;species:Candidatus Koribacter versatilis; 1578.3487 3278.685 2626.0783 2306.3071 3449.0808 2266.3712 2069.9288 1880.7134 1761.855 1862.5638 3209.3026 4318.3293 84043019 pcaG Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 7151.01255 4505.8185 6094.3417 7030.2204 4211.38685 5714.64055 5291.33075 5916.13265 4795.30795 4645.712 5734.90105 4876.4119 220962100 phenol_oxidase Carbon cycling Carbon degradation Lignin Cerrena unicolor superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Cerrena; 673.3380794 891.4437 1023.478 593.8963921 1374.0544 981.0142 896.5877 605.0090279 664.2807691 1160.1775 187929594 narH Stress Oxygen limitation Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 2286.1636 1897.0479 2730.8353 2597.0644 1715.0796 1976.4734 1376.175 1922.1101 1743.706 1959.8124 2901.9799 1579.1926 24421489 nirS Nitrogen Denitrification uncultured organism 612.5565839 730.5944 787.0514 438.6488782 736.9113 379.0346631 723.0608 708.2087 614.914 813.4769 5042259 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 3806.4578 5778.392 3939.1683 3990.815 1385.7525 6179.0109 8330.9296 5469.1945 5915.1784 5073.2307 3007.3999 2515.1895 218460943 pulA Carbon cycling Carbon degradation Starch Rhizobium etli Kim 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 3049.8703 2519.7766 2769.3794 2718.0957 3823.816 3118.2514 2103.7659 2436.0454 2525.536 2760.6255 3193.9509 3111.297 182634084 glnA Stress Nitrogen limitation Beijerinckia indica subsp. indica ATCC 9039 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Beijerinckia;species:Beijerinckia indica; 1777.469 763.5721 918.1394 1532.0545 1186.1682 1825.9685 1759.816 948.9806 1371.6643 990.6304055 889.5266 29831062 sped_bac soil_benifit Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 11701.8279 8390.9089 7859.5952 10212.7102 7170.3447 11005.5097 11480.1494 10394.6167 8713.0433 9974.2412 9782.4341 7509.9605 218887150 SMR_antibiotics Antibiotic resistance transporter Desulfovibrio vulgaris str. 'Miyazaki F' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfovibrionales;family:Desulfovibrionaceae;genus:Desulfovibrio;species:Desulfovibrio vulgaris; 8753.2371 8734.4482 8004.612 10029.0538 4890.0055 10179.1598 6701.1593 7456.3166 6768.2766 6147.3203 7101.1683 9347.692 121607007 gyrB other category gyrB Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 10248.2384 7376.0281 9059.9606 11900.9164 10301.9543 8480.7088 8017.3794 10606.7682 8117.8991 9320.4456 14897.0079 8717.1301 152980621 pstC Stress Phosphate limitation Janthinobacterium sp. Marseille superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Oxalobacteraceae;genus:Janthinobacterium; 1805.472349 2433.719434 5918.2976 3160.09643 2449.4393 2530.450779 1994.098552 2159.014707 2615.149397 3048.976037 2388.8624 2417.750374 218760428 GcdB Organic Remediation Aromatics Aromatic carboxylic acid Desulfatibacillum alkenivorans AK-01 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfatibacillum;species:Desulfatibacillum alkenivorans; 483.3612 570.9302 621.5049 402.1998192 535.9436 480.4075 793.7861 905.0874 636.2978 444.6656871 114539350 gyrB other category gyrB Fulvimarina pelagi HTCC2506 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Aurantimonadaceae;genus:Fulvimarina;species:Fulvimarina pelagi; 4971.9917 2733.9662 2878.5855 4539.031 2882.0769 3815.379 4979.8108 3041.4042 3681.3435 3212.5094 3240.3184 3771.1226 94471283 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 5390.3943 4370.1995 3792.6539 5881.2241 2002.6389 3694.0835 4216.146 3561.307 4276.4527 4794.8064 5254.7814 3548.7135 84501255 gyrB other category gyrB Oceanicola batsensis HTCC2597 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanicola;species:Oceanicola batsensis; 2399.6933 4294.5215 3350.9589 3515.5519 4102.616 4125.2732 3343.2617 2305.985 3765.6235 3692.4434 2968.6482 4429.7673 3123319 xylanase Carbon cycling Carbon degradation Hemicellulose Agaricus bisporus superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Agaricaceae;genus:Agaricus; 335.8496649 460.6443 350.178539 227333034 SMR_antibiotics Antibiotic resistance transporter Citrobacter youngae ATCC 29220 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Citrobacter;species:Citrobacter youngae; 549.5153 780.6599 494.0953 546.6271 876.8596 531.2623 547.6575 959.2878 521.0453 668.7252 594.2125 221633801 pstB Stress Phosphate limitation Thermomicrobium roseum DSM 5159 superkingdom:Bacteria;phylum:Chloroflexi;class:Thermomicrobia;order:Thermomicrobiales;family:Thermomicrobiaceae;genus:Thermomicrobium;species:Thermomicrobium roseum; 5296.183862 8870.5769 11311.2691 5816.275375 6394.5205 12477.9263 10799.919 10118.4335 10039.7639 11146.7966 5399.889487 9130.4875 116666141 gyrB other category gyrB Methanosaeta thermophila PT superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanosarcinales;family:Methanosaetaceae;genus:Methanosaeta;species:Methanosaeta thermophila; 1149.4554 2036.8592 2269.1484 1257.2684 1208.7083 2381.3402 2050.0508 1975.0178 2764.1295 2280.5352 1884.7511 134077947 ara_fungi Carbon cycling Carbon degradation Hemicellulose Aspergillus niger superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus; 617.0932 442.2442244 409.651342 821.9748 828.5681784 688.408 790.00615 878.8791 407.8759 466.0876 494.8572527 159890721 amyA Carbon cycling Carbon degradation Starch Herpetosiphon aurantiacus ATCC 23779 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Herpetosiphonales;family:Herpetosiphonaceae;genus:Herpetosiphon;species:Herpetosiphon aurantiacus; 994.0034 2104.3183 2655.2445 1227.353 2055.7445 1301.541 1928.3861 3850.0423 1439.1096 2948.9588 694.1908514 2375.4491 242350342 hly virulence hemolysin Staphylococcus epidermidis M23864:W1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Staphylococcaceae;genus:Staphylococcus;species:Staphylococcus epidermidis; 2490.5494 1453.3394 4387.5224 1398.4625 1544.0835 1641.7069 1610.1332 6112.6455 1771.6984 1648.6369 2706.8521 3354.6754 157679477 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 426.3301409 547.6891318 488.8277347 557.4715 629.6426 84787113 hrcA Stress Heat shock Erythrobacter litoralis HTCC2594 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter;species:Erythrobacter litoralis; 1428.9815 1750.61045 1511.1396 1279.7255 886.8512 1524.7636 1531.5564 1247.20005 1791.34435 1844.50765 861.930617 1879.574 56410462 fcbA Organic Remediation Aromatics Chlorinated aromatics Geobacillus kaustophilus HTA426 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus;species:Geobacillus kaustophilus; 1211.3783 1080.4158 1293.8204 1224.0245 1506.7901 1184.209 1035.6469 1503.1409 1052.6095 1027.8828 2063.4492 1786.3451 195941192 gyrB other category gyrB Escherichia coli O157:H7 str. EC4024 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia;species:Escherichia coli; 1003.53365 882.64495 636.0007 1018.8219 1364.0817 902.9111 944.6937 791.74045 740.6394 701.8393 1619.5466 1200.5094 118580349 katE Stress Oxygen stress Pelobacter propionicus DSM 2379 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter propionicus; 2519.6572 3531.905 3580.2175 2667.3327 3860.8061 3259.0798 3309.3557 2986.3419 3347.5199 3482.168 3182.8756 3622.4425 94986137 pilin virulence pilin Deinococcus geothermalis DSM 11300 superkingdom:Bacteria;phylum:Deinococcus-Thermus;class:Deinococci;order:Deinococcales;family:Deinococcaceae;genus:Deinococcus;species:Deinococcus geothermalis; 4174.137306 4223.0335 5572.719474 3407.117223 3274.63415 5268.867219 3403.827625 5020.680264 4834.620537 4165.61516 3034.70385 4797.99783 110823962 TerD Metal Resistance Tellurium Rhodococcus jostii RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1421.54 2327.5806 2452.65855 1498.33115 1203.96845 2181.4643 1972.2655 3048.9573 2185.26475 2235.5623 1631.655 2245.033 196183636 pstS Stress Phosphate limitation Microcoleus chthonoplastes PCC 7420 superkingdom:Bacteria;phylum:Cyanobacteria;order:Oscillatoriales;genus:Microcoleus;species:Microcoleus chthonoplastes; 4431.4492 8745.993 5684.8952 4031.2227 11538.1098 6284.2732 7324.83 5288.5019 5778.4199 4835.0392 5767.8268 4364.3601 56962392 CysJ Sulphur sulfite reductase Bacillus clausii KSM-K16 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus clausii; 1258.1227 1035.2179 744.1454 1345.727 1304.0387 2021.8341 1508.1076 876.6989 1510.1283 238918411 obgE Stress Radiation stress Edwardsiella ictaluri 93-146 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Edwardsiella;species:Edwardsiella ictaluri; 509.355649 1094.1013 745.9483 1025.3732 848.1889 639.5448768 1007.598 833.9998 916.1262 254831082 pstB Stress Phosphate limitation Listeria monocytogenes 10403S superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Listeriaceae;genus:Listeria;species:Listeria monocytogenes; 1467.2501 1704.2403 1549.3857 1475.8124 2619.3357 1778.8261 1318.2503 1428.631 1452.0865 1494.0263 2681.8425 1633.1333 224818795 sigma_70 Stress Sigma factors Thioalkalivibrio sp. K90mix superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Thioalkalivibrio; 1653.5292 1126.1106 1522.658 792.7915971 630.4374 849.4277 812.7535 867.275 732.5303 1564.049587 702.8741709 226941000 napA Nitrogen Dissimilatory N reduction Laribacter hongkongensis HLHK9 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Laribacter;species:Laribacter hongkongensis; 2531.1149 2391.8413 2049.4568 1598.9121 4275.034 2230.85 3405.3729 3454.2205 2280.0696 3102.6203 2809.8936 1827.6108 15964325 cap virulence capsule Sinorhizobium meliloti 1021 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Sinorhizobium;species:Sinorhizobium meliloti; 1701.093 617.5892 959.8127308 1526.1919 1025.0828 1342.2791 918.5885 1313.7328 637.1535 78518065 CopA Metal Resistance Copper Bradyrhizobium sp. BTAi1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 2061.9517 2262.1476 3122.718 1663.1809 1727.3085 2425.9847 1704.2808 3410.3425 1992.469 2028.8434 1930.2327 2678.8928 45386181 narG Nitrogen Denitrification unidentified bacterium superkingdom:Bacteria; 2105.526 4655.8111 4082.1787 4002.1017 1481.9531 5292.6564 4294.8891 4213.6586 5802.6381 4463.8887 2248.8631 4165.9551 11344611 cytochrome Energy process Energy process Pseudomonas fluorescens superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 4508.0536 3226.8737 3949.6803 5263.8081 1610.7263 3929.7198 2423.3609 3032.5681 3292.2107 2947.9985 2324.0681 2749.7105 70734226 trzN Organic Remediation Herbicides related compound Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 1972.5329 636.9749 1418.036 1613.3356 1594.4021 1238.6947 1073.65345 1083.0177 1118.9735 1304.1631 1237.0028 1205.1646 254511481 phoB Stress Phosphate limitation Rhodobacteraceae bacterium KLH11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae; 523.5909 912.2013 495.9580098 633.2229 1252.4669 647.1436 639.1899 736.5006355 737.4476 806.5303 608.2448744 117576547 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Gramella forsetii KT0803 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Gramella;species:Gramella forsetii; 1257.075 1192.8943 1312.8574 1385.943 1705.6377 1474.7199 944.665 875.077174 1276.2135 2151.1149 1545.9054 157913491 fnr Stress Oxygen stress Dinoroseobacter shibae DFL 12 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Dinoroseobacter;species:Dinoroseobacter shibae; 1199.3564 1647.5742 1515.5814 1536.7116 2866.6439 1508.2369 2315.9651 1106.7178 1278.7853 1235.2885 1962.8822 1196.6918 126710763 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 6950.1258 8592.3729 7900.96 6227.5797 6483.782 8622.0008 8442.8102 8466.3092 10863.4136 10031.9718 4600.2311 8626.167 76884526 mer Metal Resistance Mercury Nitrosococcus oceani ATCC 19707 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Chromatiaceae;genus:Nitrosococcus;species:Nitrosococcus oceani; 1557.3271 1008.6624 819.3 1643.8674 1768.1663 1154.0571 1856.8005 1130.0307 911.1332 828.7292 1085.1433 1480.8141 84326723 ZntA Metal Resistance Zinc Pseudomonas aeruginosa 2192 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 3865.0092 3687.9503 2006.5944 2548.0958 2698.1505 2584.4914 2228.6308 2827.2797 2439.0426 2021.775 4492.4807 2482.0396 157403261 nbaC Organic Remediation Aromatics Nitoaromatics Dehalococcoides sp. VS superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides; 3279.6969 5576.6646 6060.043 3368.7556 2802.2004 5467.5402 4486.3272 5261.3399 5973.9007 5709.2605 1351.888334 5722.9151 57234100 rd Organic Remediation Chlorinated solvents Dehalococcoides ethenogenes 195 superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides;species:Dehalococcoides ethenogenes; 334.3452389 459.0378 798.1451 361.0251212 495.5317 348.4205455 637.6208 631.1627 383.2324631 429.2443114 118175273 ureC Nitrogen Ammonification Mycobacterium smegmatis str. MC2 155 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium smegmatis; 1393.4262 1070.7951 1212.2732 1793.3347 623.9193084 1594.5198 1973.3494 1127.0409 1257.5842 1880.2961 736.7864693 1005.9083 254045350 narI Stress Oxygen limitation Lactobacillus plantarum JDM1 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus plantarum; 2712.0346 1601.6373 2053.9931 2293.1574 2140.9866 1747.7918 1593.6849 3599.968 1482.7931 1821.3484 4848.8857 2881.0055 161381920 grpE Stress Heat shock Oceanibulbus indolifex HEL-45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 1530.6371 510.5572333 701.7192 1394.7505 807.3539 507.1490533 606.7062 776.0049 519.0867261 553.2641 1790.1693 622.199 74422179 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Nitrobacter winogradskyi Nb-255 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter winogradskyi; 6029.6374 8104.5965 8239.0176 6784.9731 2991.1701 8657.7912 5682.4273 6905.1607 10689.9027 9125.8702 4923.6503 8825.4783 189341336 ahpC Stress Oxygen stress Chlorobium limicola DSM 245 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium limicola; 1840.27175 1705.8331 1708.0261 1821.2914 2056.42705 1863.87505 1354.8977 2376.6679 1471.1733 1519.99945 2823.4915 2004.40795 241767308 spe soil_benifit Acidovorax delafieldii 2AN superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Acidovorax;species:Acidovorax delafieldii; 4932.6351 2009.845 3170.5093 3975.5011 2672.1569 2628.5526 2944.0289 3659.8478 2588.6033 3997.5443 2516.1207 2263.7319 296101911 impG soil_borne_pathogen secretion system type IV Enterobacter cloacae subsp. cloacae ATCC 13047 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Enterobacter;species:Enterobacter cloacae; 528.5908096 701.9491 545.9962195 1425.0556 961.3312 547.4401538 434.2632 151352 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 293.7928996 713.3537 438.7449475 478.071 575.7124 578.6615 466.8013 570.2853 852.4914 703.6455 169633612 CMCI Organic Remediation Aromatics Other aromatics Acinetobacter baumannii SDF superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter;species:Acinetobacter baumannii; 19222.01472 791.6522 434.0956295 88703575 CopA Metal Resistance Copper gamma proteobacterium KT 71 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;genus:Congregibacter;species:Congregibacter litoralis; 1453.7977 1692.63185 1581.76515 1463.90925 2327.3178 1574.9719 1951.1775 1673.001271 1633.05275 1624.94175 1289.5606 1487.948 190698597 phzF soil_benifit Rhizobium etli CIAT 652 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 1126.5802 821.984 894.11295 1252.8441 1277.1522 1039.5966 1005.7096 933.2757 774.5436 1363.10525 1151.1149 1135.5691 222451202 BchY other category chlorophyllide reductase Chloroflexus sp. Y-400-fl superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Chloroflexus; 2682.2551 1184.561 1809.8403 943.199 1299.9108 2222.2648 6480.0586 864.817 1107.0195 897.1747069 1265.3947 161165886 tfdB Organic Remediation Aromatics Chlorinated aromatics Sorangium cellulosum 'So ce 56' superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Polyangiaceae;genus:Sorangium;species:Sorangium cellulosum; 2587.1545 3231.2444 3164.9552 2489.3882 3783.4639 3549.8749 2445.3837 2848.9584 3333.3082 3012.6076 2994.6188 3435.6688 125601752 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 881.4408 1209.0477 1109.7553 875.8608 944.6589 1566.2972 905.8153 1114.0893 1148.2124 1269.8821 1305.6171 1502.5112 67921918 CopA Metal Resistance Copper Crocosphaera watsonii WH 8501 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Crocosphaera;species:Crocosphaera watsonii; 1008.3357 1179.8211 1060.161 1533.4472 1220.0293 781.9848134 741.3034 1086.529 1607.4622 1821.6098 39650366 pimF Organic Remediation Aromatics Aromatic carboxylic acid Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1740.1004 1079.6877 1552.0255 635.3518884 767.8259 840.5956 1322.2344 840.5639 789.6131 802.4216798 1391.1968 209517887 CopA Metal Resistance Copper Burkholderia sp. H160 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 3274.5792 2402.6343 2500.05 3327.5397 3037.8864 2687.0018 2099.5449 2017.3586 2612.1342 2567.2338 3670.5029 2637.9018 269978046 nplT Carbon cycling Carbon degradation Starch Mobiluncus mulieris 28-1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Actinomycetaceae;genus:Mobiluncus;species:Mobiluncus mulieris; 3235.2763 1846.409 2047.1886 2341.1399 2334.7531 1647.6644 3444.082494 1853.3457 1712.8945 2392.356 1333.9421 2456.1816 110550162 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Geobacter sp. FRC-32 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 867.8522976 662.0140161 848.816927 500.5161616 662.7488955 1985.7709 3059209 cumA Organic Remediation Aromatics Other aromatics Rhodococcus erythropolis superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus; 2621.515978 2379.7805 4207.9161 2443.504643 3896.7534 3524.82315 4222.144479 2505.670883 2146.77085 3401.819014 3167.9803 2750.3285 91199715 MFS_antibiotic Antibiotic resistance transporter Streptomyces ambofaciens ATCC 23877 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces ambofaciens; 1897.8224 1911.3833 2631.6324 2023.5901 2635.1986 2300.4117 1770.7852 2752.9352 1946.4091 2150.2785 3120.6999 2263.7914 76363147 Catechol Organic Remediation Aromatics Other aromatics Burkholderia sp. 3CB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia; 2308.9582 551.982 995.9838 1365.5063 833.0994995 738.6611 985.7743 1027.9432 893.986 652.3942 1777.8207 1170.6003 115433464 tfdA Organic Remediation Aromatics Chlorinated aromatics Aspergillus terreus NIH2624 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus terreus; 791.619 1490.2291 1112.954 1376.6149 1672.0681 2331.5761 1103.8128 1359.9551 1272.1489 1706.5397 847.8627 35210329 gyrB other category gyrB Alicyclobacillus acidocaldarius subsp. rittmannii superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Alicyclobacillaceae;genus:Alicyclobacillus;species:Alicyclobacillus acidocaldarius; 331.0946042 556.8114 673.5853 574.0359 729.4858183 547.9644641 428.6424 412.5482055 526.2291 479.8558 646.3338459 512.0381 223984910 dsrA Sulphur sulfite reductase Holdemania filiformis DSM 12042 superkingdom:Bacteria;phylum:Firmicutes;class:Erysipelotrichi;order:Erysipelotrichales;family:Erysipelotrichaceae;genus:Holdemania;species:Holdemania filiformis; 1708.4405 1322.0911 1484.6171 1941.3502 1773.2474 1737.2177 2666.805 1436.5593 1753.9803 1240.5814 1353.8825 1689.2025 160366221 alkH Organic Remediation Other Hydrocarbons Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 2030.6275 2840.9527 2920.939 2604.4474 3424.2817 2744.2844 2326.988 2411.1711 2604.3527 2792.6397 3151.3072 3623.7059 42524234 nrfA Nitrogen Dissimilatory N reduction Bdellovibrio bacteriovorus HD100 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Bdellovibrionales;family:Bdellovibrionaceae;genus:Bdellovibrio;species:Bdellovibrio bacteriovorus; 1884.1349 2174.8356 2334.9396 2612.6933 1988.8553 1972.5998 3470.9024 1769.4389 2451.0876 1762.0769 2283.01 2047.7129 152027186 type_III_secretion virulence secretion Anaeromyxobacter sp. Fw109-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter; 3141.2636 2730.7806 2588.8136 3104.1879 2329.2927 2920.3049 1947.312 2073.8613 2795.8263 2709.0812 2873.775 2130.2855 118502015 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Pelobacter propionicus DSM 2379 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter propionicus; 1417.4029 2666.4561 1524.2179 2364.9462 2041.8661 2732.7232 2710.3574 1841.2535 2572.7375 2853.8095 2850.4511 29606702 katE Stress Oxygen stress Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 1562.2165 2094.9271 1530.528 1817.1137 2599.1059 2055.2033 1705.4508 1349.3964 2276.4817 2158.5752 1446.8337 2584.0435 118424509 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 584.1034 492.7432 551.75 857.6536 510.488 787.305 456.6216 451.9088 476.5506 542.5651 73537805 ZntA Metal Resistance Zinc Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 1263.8449 1830.2387 1878.9959 1471.6986 678.7122706 1921.9279 2236.8091 1062.9125 1676.6664 1782.5785 1157.5054 831.9057 209963854 amyA Carbon cycling Carbon degradation Starch Rhodospirillum centenum SW superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Rhodospirillaceae;genus:Rhodospirillum;species:Rhodospirillum centenum; 2057.5727 3182.7335 2659.4173 1873.0406 2104.7549 2091.1583 2285.3167 3289.9413 2389.6977 2266.6776 3498.4628 3667.361 184201855 SMR_antibiotics Antibiotic resistance transporter Kocuria rhizophila DC2201 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Kocuria;species:Kocuria rhizophila; 1917.249856 5686.863667 2927.309605 3417.4229 5139.807371 2610.227035 3657.297378 2519.094595 2782.637311 2656.877415 5005.8385 1995.93505 83815976 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Salinibacter ruber DSM 13855 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Rhodothermaceae;genus:Salinibacter;species:Salinibacter ruber; 755.1949709 570.7136 1027.142 630.3276202 754.2101642 834.1723 902.192 1011.2448 134298363 spe soil_benifit Desulfotomaculum reducens MI-1 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Desulfotomaculum;species:Desulfotomaculum reducens; 449.8233643 540.8318067 511.5615 498.8055513 524.2888337 431.0626 528.885 476.6064 585.9119739 77919195 CopA Metal Resistance Copper Pelobacter carbinolicus DSM 2380 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Pelobacteraceae;genus:Pelobacter;species:Pelobacter carbinolicus; 1941.9072 1191.8749 1378.256 1723.0801 1679.072501 1282.5466 1478.1338 1381.3638 1419.0268 1555.3971 5020007 dnaK Stress Heat shock Rhodothermus marinus superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Rhodothermaceae;genus:Rhodothermus; 8948.7979 9831.4803 10682.5817 11415.5309 13524.1591 10619.4879 9995.9363 7858.2027 8698.4355 7265.8859 13073.6126 10857.811 189191346 iro virulence Iron oxidation Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 1126.334842 1520.259033 1538.553995 1092.226933 952.30905 1484.1972 1262.975275 1099.943475 1189.364552 1310.319567 652.4841438 2718.1673 460976 B_lactamase_A Antibiotic resistance Beta-lactamases Streptomyces lavendulae superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 2855.975 3333.6818 3680.1619 2161.2366 1663.0925 3848.5819 2678.3555 4322.9562 3798.3803 3613.0611 1672.2325 3588.812 154366341 pheA Organic Remediation Aromatics Other aromatics Acinetobacter calcoaceticus superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Acinetobacter; 7073.2463 7966.4926 5920.1732 5643.9282 5291.3599 5801.5441 8019.5014 5594.9095 7179.752 4781.2727 5688.5456 6329.006 115279619 bphD Organic Remediation Aromatics Polycyclic aromatics Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 3926.7978 1810.6916 1836.2498 3278.8176 2822.7525 2546.652 3208.7618 3519.6077 2122.0867 2969.5163 1641.7934 2276.4938 146305080 type_III_secretion virulence secretion Pseudomonas mendocina ymp superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas mendocina; 3590.6008 4656.2189 2846.6277 3363.4683 5943.7955 4632.3512 4101.6502 4177.0271 3958.0872 3935.939 4183.4523 3248.387 212671447 pcaG Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 2817.5587 2382.2462 2462.36365 3443.8728 8818.756636 2707.3573 2676.9848 1991.988 2168.9038 2898.7377 2299.5269 1752.13095 116695425 ChrA Metal Resistance Chromium Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 1350.4294 634.0985672 668.7016533 572.0547 610.5428796 1010.9098 66391504 T4_recomb_endonuclease Bacteria phage REPLICATION Enterobacteria phage RB43 superkingdom:Viruses;order:Caudovirales;family:Myoviridae;genus:T4-like viruses; 394.1327387 540.5943761 593.9795 737.203 493.1927 441.1083 708.9900058 580.8371 212634229 GcdB Organic Remediation Aromatics Aromatic carboxylic acid Shewanella piezotolerans WP3 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella piezotolerans; 498.099319 713.3523272 370.0534514 364.424253 534.6608 74038454 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 4003.4693 2498.8915 2784.3551 3592.7238 1846.3933 3472.85 2229.2732 2453.9718 2801.5342 3393.6069 2910.2444 3974.9107 212171500 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 3357.1475 5450.7172 3075.2611 3796.3101 3251.9964 6469.7611 4558.647 4032.0179 5324.0182 3997.4773 2635.1386 4499.0332 149185143 pimF Organic Remediation Aromatics Aromatic carboxylic acid Erythrobacter sp. SD-21 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 4634.0082 9309.462263 2974.4007 3956.5757 1740.2199 2983.2111 3663.9463 2781.4166 2299.3952 3814.9505 2585.9603 2464.3249 209485857 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 1357.4411 1376.8755 638.6780657 1382.4775 855.0751 952.8651 1128.3148 605.7374569 1044.8979 1237.1533 907.7935806 1188.2739 56696824 pstB Stress Phosphate limitation Ruegeria pomeroyi DSS-3 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria;species:Ruegeria pomeroyi; 1802.2785 908.7608 1094.3144 1868.1095 1566.53165 889.89165 746.7806 1393.4378 1047.5772 1338.3939 1100.5431 1499.0094 170141860 proO Organic Remediation Aromatics Other aromatics Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 2909.8789 1221.667 2050.809 2777.7348 1571.4042 2127.8759 2551.3342 4134.9405 1910.7634 1713.8825 2162.7909 2474.9812 148262444 cytochrome Energy process Energy process Geobacter uraniumreducens Rf4 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter uraniireducens; 547.6079 1234.3076 882.0379 726.7359 969.0408 985.3053 945.4794 815.0291 1040.5529 1274.9964 1042.3402 296810228 pcbC soil_benifit Arthroderma otae CBS 113480 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma;species:Arthroderma otae; 836.0933 2787.2046 2347.7489 944.6087 817.0787199 1621.5458 2137.626 2244.1321 2269.108 2137.4594 1466.8702 2663.2242 196170813 TerC Metal Resistance Tellurium Anaeromyxobacter sp. K superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter; 7520.0313 26147.4048 21714.5763 11180.4814 26407.7323 12325.6862 13531.8864 20255.096 18128.2145 18617.4305 8521.2386 19719.9272 46117194 pme_CDeg Fungi function carbon degradation Gibberella zeae PH-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Hypocreales;family:Nectriaceae;genus:Gibberella;species:Gibberella zeae; 1652.7502 1250.8475 646.6145 1528.2465 851.5281359 641.1312 868.6289 940.7077 684.3983 729.493 2318.0379 801.3512 149937763 cda Carbon cycling Carbon degradation Starch Parabacteroides distasonis ATCC 8503 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Porphyromonadaceae;genus:Parabacteroides;species:Parabacteroides distasonis; 1720.0997 1507.3806 1511.8739 1569.4213 2345.1998 1358.2852 1309.2003 1239.9254 1367.8647 1491.056 3021.9107 1914.358 256651780 pcbC soil_benifit Acetobacter pasteurianus IFO 3283-01-42C superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Acetobacter;species:Acetobacter pasteurianus; 886.1555 648.647 903.3382 752.8571 914.5132 688.2585 528.4334 626.6987 512.7163 770.2394 1190.299 1135.4318 46307894 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 382.527167 460.7464607 539.7086536 565.4134 525.0228 507.2630905 620.2516 636.5493 78221781 Catechol Organic Remediation Aromatics Other aromatics Geobacter metallireducens GS-15 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter;species:Geobacter metallireducens; 5997.2588 5172.4899 6508.3826 6527.81575 3264.7183 6515.3329 5023.5353 4916.9734 5998.23535 6486.71895 4753.60415 5990.0161 238024339 phzF soil_benifit Burkholderia glumae BGR1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia glumae; 1893.0674 925.0203 1192.5286 1540.9852 1195.266 1034.6162 1487.0921 1804.5049 937.2268 1223.8652 1544.6379 1499.339 17134720 ZntA Metal Resistance Zinc Nostoc sp. PCC 7120 superkingdom:Bacteria;phylum:Cyanobacteria;order:Nostocales;family:Nostocaceae;genus:Nostoc; 10559.1155 5952.5063 6424.0681 8682.5186 5570.3116 7328.0875 10081.5387 10756.1108 5717.3329 8112.4033 5164.521 5351.455 68535672 hrcA Stress Heat shock Corynebacterium jeikeium K411 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium jeikeium; 2094.5921 3516.7796 1955.9679 1227.038 2900.4487 1987.2121 3576.2793 1705.1289 1968.7401 3171.897 1489.3813 1963.7258 58337637 cellobiase Carbon cycling Carbon degradation Cellulose Lactobacillus acidophilus NCFM superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus acidophilus; 2378.5643 2170.1081 2637.9861 2123.3081 3012.4048 2470.2702 1852.1435 2097.3194 1864.8549 2162.3383 4550.5001 2778.4112 85709563 B_lactamase_A Antibiotic resistance Beta-lactamases Erythrobacter sp. NAP1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Erythrobacteraceae;genus:Erythrobacter; 1525.506 1543.614 1794.55055 1528.9588 763.0455 1645.9993 1548.8363 2103.30495 1495.19925 1615.47255 1602.8014 1679.12295 112463609 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 1436.3424 1376.9096 1556.9899 935.9656 1019.6628 1037.0241 1274.5832 1399.8228 1249.4649 1258.47 1336.3926 1423.6875 161661113 phytase Phosphorus Phosphorus utilization Yersinia kristensenii superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia; 1656.6993 1466.7701 1383.625578 1477.8671 2611.1262 1669.8097 1292.3964 1698.1689 1446.7862 1593.7203 2246.6368 2355.3038 114761465 alkK Organic Remediation Others Roseovarius sp. HTCC2601 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pelagibaca;species:Pelagibaca bermudensis; 7627.9733 9491.6236 5056.4987 5566.7426 10041.8422 6685.2812 7752.5778 4743.8944 9422.9644 4771.4239 9407.1458 4273.0857 38232633 ureC Nitrogen Ammonification Yersinia rohdei superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia; 1031.566081 1636.743 847.7856291 1438.4319 1568.765 3813.3919 1833.1815 1252.4178 1359.311935 54015305 nmoA Organic Remediation Aromatics Nitoaromatics Nocardia farcinica IFM 10152 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Nocardia;species:Nocardia farcinica; 6641.8009 4500.8362 5516.0046 7150.6285 3942.0856 4736.9854 4130.7731 4213.7272 5275.2441 4876.8687 8731.3577 5020.5329 81251055 gyrB other category gyrB Nitrosospira sp. KAN8 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Nitrosomonadales;family:Nitrosomonadaceae;genus:Nitrosospira; 570.5266834 496.7810865 503.6339 29466000 norB Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2239.3923 693.985 1366.29 1885.3273 1017.6341 1508.7903 2366.0327 2349.3304 1044.7698 1674.0406 856.0471 126035167 phenol_oxidase Carbon cycling Carbon degradation Lignin uncultured fungus superkingdom:Eukaryota;kingdom:Fungi; 2440.6753 2854.7019 2783.3664 2204.9865 2479.1868 2373.2039 2532.2363 4432.5362 2492.4996 2867.7341 3068.3022 2846.3039 92912811 pcpB Organic Remediation Herbicides related compound Mycobacterium sp. KMS superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium; 1713.7596 1868.4281 2266.9239 1463.7449 1662.8271 1718.5223 1820.4513 2599.5983 2275.9575 1596.4785 1827.5833 182415985 sigma_24 Stress Sigma factors Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 667.021 466.8235 688.4301 521.7761957 434.7675 628.478 519.7988 527.8492 550.9674407 72122838 Xamo Organic Remediation Other Hydrocarbons Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 3520.1216 5564.7376 4633.2543 3718.8095 5078.2737 4975.8672 4166.6061 3041.4042 5572.8744 5099.4719 3997.3817 6015.5239 295668799 protease_serine_fungi Fungi function carbon degradation Paracoccidioides brasiliensis Pb01 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Paracoccidioides;species:Paracoccidioides brasiliensis; 709.4939 1738.556 904.4142 572.3639153 1973.6118 1324.8878 1231.5813 1334.2176 1217.5352 1413.4269 1162.7866 63255153 type_III_secretion virulence secretion Pseudomonas syringae pv. syringae B728a superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas syringae; 3652.8864 3280.9276 4100.3966 3527.1538 5669.3941 3775.2662 4004.2565 2818.383 3565.8559 3458.9417 3556.6744 3527.4558 115368536 SMR_antibiotics Antibiotic resistance transporter Stigmatella aurantiaca DW4/3-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Cystobacteraceae;genus:Stigmatella;species:Stigmatella aurantiaca; 1034.7839 1616.3422 1013.533 954.6475632 1680.7818 1236.6008 1378.6525 801.9686 1349.9603 1689.3275 946.68941 1169.3369 160898107 proX Stress Osmotic stress Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 3279.0565 2375.1444 2635.3399 3127.9394 2941.7822 3652.9616 3268.9928 2526.996 3210.1607 2180.7853 1417.393334 119195345 tre_fun soil_benifit Coccidioides immitis RS superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Coccidioides;species:Coccidioides immitis; 4206.5791 1069.6101 2741.3618 2944.598 1419.9934 1032.3727 1469.795 1355.7754 1213.027 1989.1467 4406.4726 1325.3364 50982408 pmoA Carbon cycling Methane Methane oxidation uncultured bacterium superkingdom:Bacteria; 982.2502 785.5422608 1080.4608 1101.926285 1272.7823 695.4790292 614.7687429 918.3477294 62468096 bco Organic Remediation Aromatics Aromatic carboxylic acid Azoarcus tolulyticus superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Azoarcus; 2048.5059 2818.4876 1757.344 1196.3829 3364.4454 2322.7863 1490.2808 2110.7067 2910.0674 1886.1808 1242.3363 1356.3166 85774602 pimF Organic Remediation Aromatics Aromatic carboxylic acid Anaeromyxobacter dehalogenans 2CP-C superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter;species:Anaeromyxobacter dehalogenans; 1547.038 3060.5069 2344.7247 1756.1871 14882.19835 2810.4959 3963.713 2119.8576 3483.5911 3116.0424 1492.096 2686.5005 167647811 pcaG Organic Remediation Aromatics Other aromatics Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 12655.38665 8832.14535 11570.2682 10359.46545 11028.24995 10180.10205 5541.6226 12478.73268 10806.19985 10421.71995 14344.26185 9469.1135 13249565 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1839.9292 618.3722619 1412.9036 1566.4626 1009.3678 988.9397 1429.4083 1417.0593 1012.0596 1476.9863 1346.8962 1314081 AceA Carbon cycling Carbon degradation Others Saccharomyces cerevisiae superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Saccharomyces; 1212.244953 954.9271 1008.025822 898.0905679 1253.7941 985.2305 859.7853 1021.690976 731.926 844.9652 1159.2574 161393399 oxyR Stress Oxygen stress Roseobacter litoralis Och 149 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Roseobacter;species:Roseobacter litoralis; 2519.5766 2370.29365 1717.9493 2082.79085 1638.86225 2155.97135 2679.08385 1960.24455 1886.5627 2350.56555 1897.1028 1683.13275 121610032 AceA Carbon cycling Carbon degradation Others Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 2294.4647 4164.2734 3581.70775 4039.85895 2106.23375 4130.6276 3270.2307 3532.01465 3943.04265 3823.08525 2565.2511 4254.8515 126462168 cytochrome Energy process Energy process Rhodobacter sphaeroides ATCC 17029 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 2498.9043 1717.4161 2280.0385 2983.0881 923.6327 2682.6596 3938.8762 1888.1455 2058.1224 3710.6559 2217.2307 1945.8463 156740707 sigma_24 Stress Sigma factors Roseiflexus castenholzii DSM 13941 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus;species:Roseiflexus castenholzii; 4584.7923 2149.9876 3638.7825 3856.5929 1848.1755 3132.9684 2533.0965 5716.0248 3075.2027 3356.2886 5533.9233 2973.3281 121709492 ara_fungi Carbon cycling Carbon degradation Hemicellulose Aspergillus clavatus NRRL 1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus clavatus; 583.3411689 435.7780276 1361.5854 490.0953615 90421601 czcD Metal Resistance "Cadmium,Cobalt,Zinc" Rhodopseudomonas palustris BisB18 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 553.5884589 448.2077551 366.6434034 497.7673068 849.3676 415.2337 553.5691 563.8275 431.4552121 253986760 sigma_70 Stress Sigma factors Methylovorus sp. SIP3-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Methylophilales;family:Methylophilaceae;genus:Methylovorus; 899.9505 474.4957121 468.4272526 780.8472 495.5669205 91784295 exaA Organic Remediation Chlorinated solvents Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 31608.6133 21391.8068 26996.7714 26517.7233 17955.9695 26167.3867 23150.8537 30526.0796 33795.8164 23211.0734 32618.9249 22883.2835 59801112 ZntA Metal Resistance Zinc Neisseria gonorrhoeae FA 1090 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Neisseria;species:Neisseria gonorrhoeae; 10962.0038 7106.8926 11075.9184 11791.7335 12719.9904 7528.4718 8532.6335 8812.2977 8884.8767 8793.4674 14028.2543 7834.2636 234833 metalloprotease_fungi Fungi function carbon degradation Aspergillus oryzae superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus; 1401.9557 1300.9002 1031.8528 2139.1699 1131.8464 1638.0276 3498.8438 1640.371 1335.3758 1395.125 1658.8748 113933127 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 3194.4152 3293.9251 4138.3156 2798.418 2159.5859 3623.9086 2662.5954 3654.8004 3774.034 2876.7119 1870.2673 3544.4016 89053937 glnA Stress Nitrogen limitation Jannaschia sp. CCS1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Jannaschia; 1080.2253 1553.4067 1276.9158 1100.0482 2039.4962 970.2443 936.8997 1635.953 1137.6817 1186.8819 1155.2201 302405671 hmgB_fungi Fungi function carbon degradation Verticillium albo-atrum VaMs.102 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Plectosphaerellaceae;genus:Verticilium;species:Verticillium albo-atrum; 654.2738 926.4475 1189.3299 760.8563 599.9617 922.5755 1237.5364 1031.2886 921.2483 182677344 sigma_32 Stress Sigma factors Beijerinckia indica subsp. indica ATCC 9039 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Beijerinckiaceae;genus:Beijerinckia;species:Beijerinckia indica; 548.884 1136.2791 775.4344 721.7911 2860.287426 1245.5746 1100.7289 615.2965 946.4411 1104.9202 1145.017 146327854 phenol_oxidase Carbon cycling Carbon degradation Lignin Lentinus tigrinus superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Lentinaceae;genus:Lentinus; 1430.1233 849.4697 1111.1656 1761.7209 1466.4442 1089.5357 1240.0693 606.2425 1240.5069 1442.7499 1580.891 1569.2641 196477505 norB Nitrogen Denitrification Phenylobacterium zucineum HLK1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Phenylobacterium;species:Phenylobacterium zucineum; 2390.2773 1916.9008 1819.7329 1548.9983 1737.1295 1273.827 1131.4577 3336.7606 1634.7418 2091.3755 3652.4364 1643.8308 148261067 ABC_transporter_III Bioleaching other category Acidiphilium cryptum JF-5 14497.5725 10437.873 11564.6341 14727.524 10952.5066 13884.2511 13640.8421 14486.8049 11971.7633 12366.8429 13733.136 11628.9922 187926707 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 962.6524 641.4618296 664.2467742 758.1137268 783.9035 709.1252205 773.914 83816321 pcc Carbon cycling Carbon fixation Salinibacter ruber DSM 13855 superkingdom:Bacteria;phylum:Bacteroidetes;class:Sphingobacteria;order:Sphingobacteriales;family:Rhodothermaceae;genus:Salinibacter;species:Salinibacter ruber; 619.7429043 621.8000178 1089.2837 562.9409 811.603 796.8597 1004.8604 934.5243 1124.8411 983.3048 227454992 pstA Stress Phosphate limitation Corynebacterium aurimucosum ATCC 700975 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium aurimucosum; 1919.0052 3527.4451 1500.3731 1556.8196 3133.3477 2101.0194 5497.141 1221.1395 2962.573 1982.123 2145.5172 222440772 nhh Organic Remediation Aromatics Nitoaromatics Labrenzia alexandrii DFL-11 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Labrenzia;species:Labrenzia alexandrii; 1365.5945 1985.2009 1666.1523 1532.2325 3111.4115 1887.2741 1658.1246 2167.7542 1688.9327 1926.7262 1936.5752 2193.0423 166030891 ChrA Metal Resistance Chromium Dorea formicigenerans ATCC 27755 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Dorea;species:Dorea formicigenerans; 2825.6718 3552.3058 4120.1413 3286.2143 4810.7736 2986.5463 2461.9926 2728.4483 3355.6858 2002.1891 6533.4669 6647.5553 117999846 nagL Organic Remediation Aromatics Aromatic carboxylic acid Comamonas testosteroni KF-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Comamonas;species:Comamonas testosteroni; 1851.9243 1543.1107 1542.843 1131.2786 1288.8503 19130.24842 1116.7184 2210.1191 1428.7187 1469.4601 1681.6982 1190.8967 154159159 nmoA Organic Remediation Aromatics Nitoaromatics Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 5110.3981 4634.289 5433.2749 4413.4247 5007.839 4443.3935 3494.9784 6681.0622 4585.895 4227.0483 7554.969 5840.203 213963871 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Capnocytophaga sputigena Capno superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Capnocytophaga;species:Capnocytophaga sputigena; 1003.1105 1029.1015 1228.0631 570.1312221 958.2793 895.148 1101.6341 808.8083 31374.46353 146195550 napA Nitrogen Dissimilatory N reduction Bradyrhizobium sp. ORS278 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Bradyrhizobium; 3078.2527 2781.6106 1326.1562 2577.4633 2894.9315 3682.4026 3044.7834 4346.6201 3081.6446 3211.5602 2929.3679 3453.2874 37654996 linD Organic Remediation Pesticides related compound Sphingomonas paucimobilis superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingobium; 2430.9503 1296.2109 1651.86 2148.6211 1402.4937 1011.4788 1200.2332 1043.2672 1133.4648 1196.2282 2660.5086 1865.004 40742680 nagG Organic Remediation Aromatics Aromatic carboxylic acid Aspergillus nidulans FGSC A4 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans; 5194.6723 1993.0248 3315.2644 4340.6498 3223.9174 2424.9527 2388.1702 3024.4583 2255.1875 2754.8301 5778.3976 2422.6884 227882613 endochitinase Carbon cycling Carbon degradation Chitin Halogeometricum borinquense DSM 11551 superkingdom:Archaea;phylum:Euryarchaeota;class:Halobacteria;order:Halobacteriales;family:Halobacteriaceae;genus:Halogeometricum;species:Halogeometricum borinquense; 1118.04395 767.4714 1791.2792 1373.75215 996.2098 1025.5676 1844.91155 1238.588634 1459.1807 1502.16105 1925.644 1037.35535 209485931 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 1470.044 924.7527 1118.8861 1452.7869 1326.466 1215.7518 1197.2968 1296.3676 1068.8132 1695.3909 1044.9982 1091.708 241773352 ara Carbon cycling Carbon degradation Hemicellulose Asticcacaulis excentricus CB 48 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Asticcacaulis;species:Asticcacaulis excentricus; 2986.8862 2533.7297 4073.3823 2646.8823 3380.5421 2187.4319 2497.7224 5148.3344 2407.5206 2564.2746 4760.4271 3713.488 39648997 fnr Stress Oxygen stress Rhodopseudomonas palustris CGA009 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 4092.8881 2920.6574 2861.269 2927.572 3357.5442 3123.9697 2585.3434 3017.4741 2445.7175 2953.1797 4538.7041 3399.539 208008989 atzA Organic Remediation Herbicides related compound Aliivibrio salmonicida LFI1238 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Aliivibrio;species:Aliivibrio salmonicida; 681.9309 726.0772 645.2333 648.0025 808.4900652 980.0257 598.5853 738.288 608.7152 601.00065 608.5191236 729.8032161 145213691 CadA Metal Resistance Cadmium Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 3969.5259 8118.0908 6282.8461 5772.0822 3552.8843 7797.7598 6395.4204 6372.0522 7605.6721 7384.7081 2717.567 7811.5229 227841267 ppk Phosphorus Phosphorus utilization Oribacterium sinus F0268 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Lachnospiraceae;genus:Oribacterium;species:Oribacterium sinus; 665.9061 628.9903 836.0966 550.9108313 476.2553 607.096 514.4532484 71908744 sox Sulphur Sulphur oxidation Dechloromonas aromatica RCB superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Rhodocyclales;family:Rhodocyclaceae;genus:Dechloromonas;species:Dechloromonas aromatica; 2223.8108 1943.2269 2430.1151 1719.112128 2339.3223 2254.0621 1800.9978 1545.2314 2316.7288 2381.0555 3436.5033 2755.2309 225045070 sigma_24 Stress Sigma factors Clostridium asparagiforme DSM 15981 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Clostridiaceae;genus:Clostridium;species:Clostridium asparagiforme; 826.77805 683.1555742 1088.19325 966.0111 676.6172456 732.0355 867.6654 1088.0531 911.6924 708.07015 1223.2776 257486544 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas amygdali; 2323.68 1396.9154 1237.2811 2920.1753 1139.026 1122.5338 977.8921 1015.3562 1523.7514 838.2775 86158518 cytochrome Energy process Energy process Anaeromyxobacter dehalogenans 2CP-C superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Myxococcales;family:Myxococcaceae;genus:Anaeromyxobacter;species:Anaeromyxobacter dehalogenans; 2344.4597 2263.2944 1639.8795 1413.8037 1581.5097 966.6997 891.5464 3701.7286 961.0256 1841.2582 3308.7405 1526.2269 89951623 pimF Organic Remediation Aromatics Aromatic carboxylic acid Saccharophagus degradans 2-40 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Saccharophagus;species:Saccharophagus degradans; 756.2964256 913.6112 578.1698057 569.3729 527.6817 729.9979 95111185 catB Organic Remediation Aromatics BTEX and related aromatics Pseudomonas superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae; 2111.1676 2116.6149 2333.413 1797.9097 1613.9115 2109.2703 1904.2184 3003.3121 1715.7485 2105.0879 2640.4961 2223.4183 261376516 glnR Stress Nitrogen limitation Geobacillus sp. Y412MC61 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 483.7401104 876.0331 619.5364038 540.3864 629.5086 58270684 AceA Carbon cycling Carbon degradation Others Cryptococcus neoformans var. neoformans JEC21 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Tremellomycetes;order:Tremellales;family:Tremellaceae;genus:Filobasidiella;species:Cryptococcus neoformans; 2178.39625 3311.4524 2856.7908 2260.7491 2897.58585 2327.8415 1934.9758 2844.95795 2241.63975 2579.1986 2744.4986 2609.5307 187930012 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Ralstonia pickettii 12J superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia pickettii; 1147.3465 2611.3191 1078.673413 1710.136 1135.427726 2088.6356 2942.3657 937.9722 1998.6663 1306.0614 1181.0232 261354516 iro virulence Iron oxidation Verticillium albo-atrum VaMs.102 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Sordariomycetes;order:Glomerellales;family:Plectosphaerellaceae;genus:Verticilium;species:Verticillium albo-atrum; 2296.8926 4141.65115 4934.66505 3196.382475 5554.167525 4398.760175 3034.681 3545.132625 3813.477325 4557.896225 6376.097733 4356.422775 238719142 xylA Carbon cycling Carbon degradation Hemicellulose Yersinia mollaretii ATCC 43969 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia mollaretii; 1567.361 686.5052 954.0229 1407.5714 613.7566929 591.3705 590.6038 682.5790669 1405.2418 878.7718624 1322.1505 88702187 pstC Stress Phosphate limitation Congregibacter litoralis KT71 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;genus:Congregibacter;species:Congregibacter litoralis; 2229.4927 1725.788 1691.4074 2250.5307 1305.1744 1953.8147 1786.075 1889.2833 1645.8433 1751.1561 3299.6351 2664.8858 218531372 gyrB other category gyrB Methylobacterium chloromethanicum CM4 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium chloromethanicum; 1258.1764 1240.6152 1117.0687 1276.3217 1480.2657 1563.7248 1004.1267 1000.0671 1095.7223 1439.0092 1658.5145 1505.2027 118033149 rubisco Carbon cycling Carbon fixation Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 2153.842 2980.9552 3820.0172 2405.4086 1976.2472 3240.6537 2913.3919 2965.9462 3918.4809 3633.719 1103.5942 3830.3914 71039007 ZntA Metal Resistance Zinc Psychrobacter arcticus 273-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Moraxellaceae;genus:Psychrobacter;species:Psychrobacter arcticus; 1108.7555 705.4762622 729.5047778 659.2628 554.2304 456.6952065 580.3316 921.1752835 78196632 ppx Phosphorus Phosphorus utilization Synechococcus sp. CC9605 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Synechococcus; 4234.1288 3139.0648 3133.012 3697.4414 2079.406 3903.3967 2794.916 2669.2947 2852.7546 2769.1567 1649.1689 1374.3884 196202915 pstC Stress Phosphate limitation Cyanothece sp. PCC 7822 superkingdom:Bacteria;phylum:Cyanobacteria;order:Chroococcales;genus:Cyanothece; 2121.9537 1031.0893 1720.1811 1654.072 1218.8454 1326.189 1598.6859 1066.0596 1133.0804 1391.5183 1350.6152 1648.8019 89351557 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Xanthobacter autotrophicus Py2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Xanthobacteraceae;genus:Xanthobacter;species:Xanthobacter autotrophicus; 5988.4002 6085.1563 8322.736 4526.3334 3934.2553 7519.9916 5675.3539 8318.0803 7069.4715 7165.3655 4241.0392 8218.536 12667608 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium UMTRAdsr626-21 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria; 586.763 1599.5347 1189.4026 776.6771 1586.4581 1010.6861 1030.9899 1572.9018 1084.1549 1314.7936 1165.4095 73748096 ArsC Metal Resistance Arsenic Dehalococcoides sp. CBDB1 superkingdom:Bacteria;phylum:Chloroflexi;class:Dehalococcoidetes;genus:Dehalococcoides; 3740.653 3387.7103 3773.927 3223.5207 4906.6709 3569.0339 3059.4423 3240.4711 3240.4778 3321.9071 6680.4254 4137.8313 121554214 linB Organic Remediation Pesticides related compound Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 4365.0399 3656.3488 4588.778 3507.128 2508.0053 4531.3664 3187.0601 3222.4478 3375.7569 3347.1991 6170.5272 4091.0177 91800235 ChrA Metal Resistance Chromium Nitrobacter hamburgensis X14 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Nitrobacter;species:Nitrobacter hamburgensis; 852.0558249 628.8706 764.4716 1408.3521 617.8443 1091.828 482.1642559 744.3554 1443.8108 179346777 CopA Metal Resistance Copper Methylobacterium populi BJ001 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 3175.8182 3118.11605 3815.75715 2983.12915 3381.9451 3216.17025 2793.31585 2822.93425 3062.7442 2918.53585 4764.23505 3919.33585 5881927 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Streptomyces coelicolor A3(2) superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces coelicolor; 1342.4238 1432.4671 1340.875 1543.4919 2613.4013 947.3313 1681.9827 854.7432 1310.2258 1082.5091 1521.2859 1276.463 242214611 endochitinase_fungi Fungi function carbon degradation Postia placenta Mad-698-R superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Polyporales;family:Coriolaceae;genus:Postia;species:Postia placenta; 3589.3785 2972.3284 3645.4561 3512.5522 5530.4776 3588.2528 2139.381 3511.159 3405.9044 3335.3292 5319.5517 3697.7095 166859718 mauAB Organic Remediation Herbicides related compound Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 2123.3776 1624.2205 1631.1971 1124.0594 3101.1872 1281.8302 1769.412 197790482 alkK Organic Remediation Others Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans; 1494.378551 1711.6437 2336.4372 1652.579 1104.6963 1692.4535 1320.9229 1911.2177 1867.7785 2036.1091 68346783 vip virulence virulence protein Pseudomonas fluorescens Pf-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas fluorescens; 7920.0854 6389.9072 9578.1188 8614.3323 4262.9947 5663.0937 4415.9115 6901.2994 6146.8991 5961.9349 6221.7717 7440.5435 253984143 iro virulence Iron oxidation Methylotenera mobilis JLW8 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Methylophilales;family:Methylophilaceae;genus:Methylotenera;species:Methylotenera mobilis; 676.2356 1079.8806 576.7105761 751.4462 1040.725011 762.666 1656.0715 829.5208 624.0817 612.0349899 170141945 nitA Organic Remediation Aromatics Other aromatics Burkholderia graminis C4D1M superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia graminis; 6918.653539 6270.098245 6841.351886 5964.906994 6444.012589 6932.285902 7502.741392 7762.361557 7525.144155 7269.150457 11225.1836 7226.60359 139478509 mer Metal Resistance Mercury uncultured soil bacterium superkingdom:Bacteria; 2479.8304 2617.8306 4397.2348 1731.9972 3718.1166 2754.9034 2626.361 4298.6992 3887.9723 3412.6903 4226.5284 3474.1881 68250348 pheA Organic Remediation Aromatics Other aromatics Pseudomonas sp. M1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 2124.2372 2054.5332 2116.8429 1411.0066 1125.7598 1337.4056 15944.00533 1205.5601 1282.2881 2740.03 1497.3616 161504413 cda Carbon cycling Carbon degradation Starch "Salmonella enterica subsp. arizonae serovar 62:z4,z23:--" superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Salmonella;species:Salmonella enterica; 660.6004 2168.7956 908.2418 1978.0483 1090.104 1811.0801 956.4433 824.4302 631.3399 1122.0211 1075.6823 156081384 alkB Organic Remediation Other Hydrocarbons Geobacillus stearothermophilus superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus; 1091.7234 1462.5268 1873.5436 1044.9705 710.0144092 1649.2149 1461.9723 1506.9093 2165.3043 1395.6499 1329.9642 91686229 cymA Organic Remediation Burkholderia xenovorans LB400 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia xenovorans; 1895.6598 1615.0424 1657.9666 1612.6233 1819.1674 1589.4197 1206.6679 1239.0175 1341.806 1497.0077 2617.9851 1326.7234 87281036 nirK Nitrogen Denitrification denitrifying uncultured bacterium superkingdom:Bacteria; 1451.803 765.6109 927.4156 1271.1029 902.4549 874.9279 988.5616 1060.649 797.7541 1009.5587 1723.8854 1105.1519 66801927 narG Nitrogen Denitrification unidentified bacterium superkingdom:Bacteria; 1891.9928 2397.4353 2057.1191 2111.131 1596.7469 2511.8338 1880.9797 1798.8523 1824.934 1950.4996 1548.674 1523.7826 255009858 B_lactamase_C Antibiotic resistance Beta-lactamases Bacteroides fragilis 3_1_12 superkingdom:Bacteria;phylum:Bacteroidetes;class:Bacteroidia;order:Bacteroidales;family:Bacteroidaceae;genus:Bacteroides;species:Bacteroides fragilis; 600.37 660.2045 1125.1526 874.7634 773.2883 1010.5131 868.766 914.3312 773.925104 92113104 sigma_70 Stress Sigma factors Chromohalobacter salexigens DSM 3043 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Oceanospirillales;family:Halomonadaceae;genus:Chromohalobacter;species:Chromohalobacter salexigens; 1083.2476 1301.1678 1890.104 1163.7417 856.6866 1653.8663 1296.4225 1655.2714 1754.2483 1756.6612 1833.7766 284039939 obgE Stress Radiation stress Spirosoma linguale DSM 74 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Spirosoma;species:Spirosoma linguale; 984.6143 504.5427323 444.1536538 659.2345 627.4658 351.2308935 618.4976 598.1689 621.7736 607.7452 558.2612 211957185 mdlA Organic Remediation Aromatics Aromatic alpha hydroxy acid Pseudovibrio sp. JE062 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Pseudovibrio; 1515.7139 822.825 689.2152 1206.8204 1055.6859 808.6267 729.7244 802.2107 666.76765 724.1443 1064.9866 661.8855 209552028 proV Stress Osmotic stress Rhizobium leguminosarum bv. trifolii WSM2304 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium leguminosarum; 4075.5202 1915.5119 3961.7481 4556.0433 2193.1632 2893.9819 2978.8869 3008.0247 2596.9207 3607.329 2489.045 3338.1142 82735669 nmoA Organic Remediation Aromatics Nitoaromatics Pseudomonas putida F1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 16555.32795 23123.44591 19520.83515 18566.46029 56546.6633 19056.3474 22736.84935 31435.752 22679.84548 18353.08864 20345.78608 15653.09457 87135260 pimF Organic Remediation Aromatics Aromatic carboxylic acid Novosphingobium aromaticivorans DSM 12444 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Novosphingobium;species:Novosphingobium aromaticivorans; 641.0027 1437.6278 764.4571 785.5804 1004.9691 1253.995 863.8343 684.8355 1188.6225 1088.1817 1486.1285 189500176 pstA Stress Phosphate limitation Chlorobium phaeobacteroides BS1 superkingdom:Bacteria;phylum:Chlorobi;class:Chlorobia;order:Chlorobiales;family:Chlorobiaceae;genus:Chlorobium;species:Chlorobium phaeobacteroides; 2424.2207 1468.5795 12292.47725 2495.0589 2099.7496 2077.1592 1626.8912 1901.1213 1522.4927 1810.6956 3236.5946 2367.0037 255938524 rgh_fungi Fungi function carbon degradation Penicillium chrysogenum Wisconsin 54-1255 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium chrysogenum; 1929.392722 1527.92155 2448.8856 1805.9844 2834.5264 1475.21345 1657.7117 1661.247957 1705.78285 1526.676642 3941.8608 1872.44695 13470715 per_bac soil_benifit Mesorhizobium loti MAFF303099 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium loti; 1123.0744 3108.43805 2677.5626 1666.88605 1554.74825 2123.77795 2846.24525 2234.41845 2443.75465 2972.7043 1273.1839 2355.78435 251777427 hly virulence hemolysin Geobacter sp. M21 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfuromonadales;family:Geobacteraceae;genus:Geobacter; 3496.6285 1764.2832 2182.9729 3168.1279 2598.6887 1376.2776 1560.7539 1451.7501 1852.1576 1888.1461 3124.0633 1737.0048 114571544 hrcA Stress Heat shock Maricaulis maris MCS10 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Maricaulis;species:Maricaulis maris; 5852.3982 6745.6284 7231.693 5208.4017 8116.7668 5249.2532 6431.1846 3390.552 6972.0981 4607.9582 7123.2229 10622.6445 156233542 CadA Metal Resistance Cadmium Roseiflexus castenholzii DSM 13941 superkingdom:Bacteria;phylum:Chloroflexi;class:Chloroflexi;order:Chloroflexales;family:Chloroflexaceae;genus:Roseiflexus;species:Roseiflexus castenholzii; 1010.316064 904.7087 661.0552557 424.1701269 1502.2104 127511599 CysJ Sulphur sulfite reductase Shewanella loihica PV-4 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Shewanellaceae;genus:Shewanella;species:Shewanella loihica; 1523.6658 1459.0735 1686.9438 1478.1821 2514.8876 1407.9102 1406.9496 1169.539 1287.5336 1357.3489 2485.2732 1759.245273 160363924 iro virulence Iron oxidation Delftia acidovorans SPH-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Delftia;species:Delftia acidovorans; 2742.902 2969.8182 2881.3626 3014.0308 4168.2539 3287.7809 2133.8982 2589.6244 2505.6163 2881.3683 2898.8807 3015.5413 111026297 alkK Organic Remediation Others Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1399.8334 519.4503 554.6104859 1417.6801 775.8621 874.8082 1738.5653 1068.2505 706.8109 753.7242 915.3374 1216.3016 145590783 proO Organic Remediation Aromatics Other aromatics Pyrobaculum arsenaticum DSM 13514 superkingdom:Archaea;phylum:Crenarchaeota;class:Thermoprotei;order:Thermoproteales;family:Thermoproteaceae;genus:Pyrobaculum;species:Pyrobaculum arsenaticum; 1712.5373 1348.4937 1822.8444 1358.6438 1798.0844 1368.3508 1207.8609 1644.3775 1537.182 1508.3863 2332.0923 1497.2929 223934969 fnr Stress Oxygen stress bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3;genus:Pedosphaera;species:Pedosphaera parvula; 4992.8521 9788.6143 10546.4485 5271.6568 9294.9755 5170.5532 5484.4549 13806.2785 6565.4687 6726.2114 11745.941 11744.8108 229746441 fnr Stress Oxygen stress Stackebrandtia nassauensis DSM 44728 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Glycomycetaceae;genus:Stackebrandtia;species:Stackebrandtia nassauensis; 3250.9249 5059.954 5200.4396 11493.45259 1551.4778 6213.9387 5158.0352 2294.5464 5189.9623 4510.4193 4561.0469 3271.5261 169639106 sigma_24 Stress Sigma factors Candidatus Desulforudis audaxviator MP104C superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Peptococcaceae;genus:Candidatus Desulforudis;species:Candidatus Desulforudis audaxviator; 15255.7585 12757.91 13429.0905 12083.8606 16257.3278 14254.494 14537.8024 18064.9489 21779.0261 13675.8969 14468.4811 13822.6387 82618403 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1130.1666 598.3664003 1226.8127 1391.6959 753.848779 12146.83455 630.3421 592.9990098 567.0880139 651.0209967 160917625 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 2155.6621 1522.7481 1919.36475 1750.98885 1579.96445 1277.60355 1897.47965 1246.41935 1317.2792 3235.08235 1364.74165 1795.3398 187767670 amoA Nitrogen Nitrification Bacteria superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Escherichia;species:Escherichia coli; 3162.7016 2533.0671 2403.9876 3162.4024 2121.1739 3146.5637 3085.7321 2907.6641 2417.9697 2900.1168 2766.9936 2824.8814 238764149 AceB Carbon cycling Carbon degradation Others Yersinia kristensenii ATCC 33638 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Enterobacteriales;family:Enterobacteriaceae;genus:Yersinia;species:Yersinia kristensenii; 1621.7484 499.7642621 1072.3016 1440.1989 977.1537995 26355.32889 1233.4968 868.5663 874.0546 1211.0573 1254.252354 1199.3696 302534526 sid_bac soil_benifit Streptomyces sp. C superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 2163.2983 6077.1667 6203.9985 3262.5587 4260.8902 3784.913 3266.6979 5230.474 4008.6902 4429.7417 3121.0122 4238.7091 223896443 acetylglucosaminidase Carbon cycling Carbon degradation Chitin bacterium Ellin514 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Verrucomicrobiae;order:Verrucomicrobiales;family:Verrucomicrobia subdivision 3;genus:Pedosphaera;species:Pedosphaera parvula; 3675.4795 1552.9862 2224.3668 3261.4218 1894.4747 1661.165 1759.5215 1466.009 1394.2262 2107.4664 4569.936 1863.6308 189185264 pstB Stress Phosphate limitation Methylacidiphilum infernorum V4 superkingdom:Bacteria;phylum:Verrucomicrobia;order:Methylacidiphilales;family:Methylacidiphilaceae;genus:Methylacidiphilum;species:Methylacidiphilum infernorum; 541.4455922 497.7752 450.6964436 386.8860094 668.0570302 447.9076306 389.9199376 522.9651 314.0078048 413.2925386 118762970 vanA Carbon cycling Carbon degradation Others Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 2591.2513 3532.2745 3601.6051 3415.8888 2761.9683 3298.9533 4646.4286 2216.958 3210.9361 2504.3331 3859.8889 2825.7054 55978148 dsrB Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 1942.7938 2078.1706 2276.9998 1799.0329 2355.2104 1749.9306 1832.8736 2494.9205 2730.4641 2437.8593 1622.5496 2922.1888 116700066 pimF Organic Remediation Aromatics Aromatic carboxylic acid Syntrophobacter fumaroxidans MPOB superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Syntrophobacterales;family:Syntrophobacteraceae;genus:Syntrophobacter;species:Syntrophobacter fumaroxidans; 2621.0576 1271.5095 1878.3707 2483.3544 2535.0037 1808.2526 1945.19575 2653.66205 1510.84955 2024.4885 4666.9234 1854.7871 54309970 Arylest Organic Remediation Aromatics Other aromatics Photobacterium profundum SS9 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Photobacterium;species:Photobacterium profundum; 520.074684 2357.2345 848.8927651 978.9142408 504.1178869 474.1050093 1377.787 746.3918375 146283178 cytochrome Energy process Energy process Pseudomonas stutzeri A1501 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas stutzeri; 1585.0111 794.613 926.9067 1171.2206 1271.7677 1173.5601 847.3057 770.1585 969.8671 1100.1968 1552.9263 1140.2106 148520702 Catechol Organic Remediation Aromatics Other aromatics Methylobacterium sp. 4-46 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium; 6074.9311 4029.7566 5013.9707 4413.0823 3615.1284 2187.9853 3441.8483 5739.0714 4972.9193 3853.2961 7123.5352 3762.4438 99036678 pcaG Organic Remediation Aromatics Other aromatics Silicibacter sp. TM1040 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Ruegeria; 541.2544 523.7330683 950.577 536.9239515 785.5042 698.0666 622.9619319 1042.8943 877.3591 945.3898 46307984 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 779.6508 6817.485275 29607083 proX Stress Osmotic stress Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 5893.7562 2528.072 4510.6428 4896.783 2925.2099 2870.0817 3749.7551 3080.8037 3252.9538 4461.8341 3466.3178 2461.3175 159040116 fnr Stress Oxygen stress Salinispora arenicola CNS-205 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micromonosporaceae;genus:Salinispora;species:Salinispora arenicola; 1007.4357 1496.7023 850.9843264 831.2617 1989.6326 1279.5104 1241.7668 1427.59 1256.1631 1299.5737 738.1824 150034100 nifH Nitrogen Nitrogen fixation Methanococcus maripaludis C7 superkingdom:Archaea;phylum:Euryarchaeota;class:Methanococci;order:Methanococcales;family:Methanococcaceae;genus:Methanococcus;species:Methanococcus maripaludis; 5146.8534 2885.5644 4624.6469 3925.0805 1428.5947 4034.297 5825.8348 2552.5382 3872.748 1999.6398 1934.4073 157679411 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 2174.6621 616.7652 1094.9832 1405.6948 1437.5499 806.8618 892.0855 1335.9607 738.2047 853.3959 1014.174515 789.1843 77378693 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 594.6243636 996.162 1207.3589 760.8153 594.2837486 1219.6637 1358.3899 825.432 1369.2189 1046.6064 166408402 nahA Organic Remediation Aromatics Polycyclic aromatics uncultured bacterium superkingdom:Bacteria; 3131.1088 1830.3152 2513.3148 3361.9616 1219.1361 2970.9619 3492.0076 3466.6273 1979.7134 3570.2154 1616.9279 1378.0412 115351575 silC Metal Resistance Silver Burkholderia cepacia AMMD superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia ambifaria; 2863.2822 1770.4889 2170.8906 2840.3325 3124.1144 2292.7391 2715.1405 1862.8718 2272.7774 2801.4165 1943.6144 2915.0618 225679356 chitin_synthase Fungi function major biomolecule Paracoccidioides brasiliensis Pb03 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Paracoccidioides;species:Paracoccidioides brasiliensis; 708.3697127 1567.5382 783.471 1873.733 1164.691 1157.8736 1178.9306 1213.6479 1046.762 254941666 invertase_fungi Fungi function carbon degradation Capnodium sp. olrim506 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Capnodiales;family:Capnodiaceae;genus:Capnodium; 3150.1827 5438.4716 5551.9753 6252.4955 8658.5355 7604.4049 4586.9326 5129.4034 6110.4146 6624.7195 6997.8625 6871.7496 76667210 nifH Nitrogen Nitrogen fixation uncultured nitrogen-fixing bacterium superkingdom:Bacteria; 1628.152644 1598.117991 1426.8712 1281.43086 1783.317067 1284.445564 1676.876373 1415.60678 1351.678682 1387.191127 1481.621325 1379.956825 260220880 glnA Stress Nitrogen limitation Curvibacter putative symbiont of Hydra magnipapillata superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Curvibacter; 1997.7721 3844.0721 3327.0705 1950.4317 2618.5394 2510.2634 3230.5208 4536.1972 2743.7672 4004.434 1746.5406 3343.5522 219946374 Arylest Organic Remediation Aromatics Other aromatics Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 4184.050398 2544.758337 4567.688796 4604.395529 3033.2234 2964.60545 2593.287605 2147.775828 3112.668181 3280.8257 3862.302998 2874.857527 71157478 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Nocardioides sp. JS614 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 3324.8875 2661.5503 2557.9317 3302.2404 1867.0403 3416.7341 2802.8648 2552.1374 2045.4134 2114.4677 3186.191 2063.7523 39837158 Catechol Organic Remediation Aromatics Other aromatics Pseudomonas stutzeri superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 1111.6301 1853.0096 1035.5022 885.9833 2420.7725 1400.1179 1106.4182 1275.8145 1734.7247 1262.155 1158.9416 51534847 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 751.5908 817.1036 967.152 878.6962 1050.7185 1160.8921 866.266 913.9452 1022.4504 946.2449 1061.022487 932.2754 238496905 rgh_fungi Fungi function carbon degradation Aspergillus flavus NRRL3357 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus flavus; 1492.2342 1586.8049 1978.097 950.1836 870.2237 1498.7547 1365.5994 2000.7152 1685.4147 1761.3064 1667.8075 151562866 gyrB other category gyrB Ochrobactrum anthropi ATCC 49188 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Brucellaceae;genus:Ochrobactrum;species:Ochrobactrum anthropi; 1748.6568 1139.6559 1915.4609 1844.2074 2000.6481 1481.5699 1277.7604 1473.3321 1248.2767 1396.0072 3085.0714 2067.2403 221040357 endopolygalacturonase_fungi Fungi function carbon degradation Athelia rolfsii superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Atheliales;family:Atheliaceae;genus:Athelia; 902.8787 825.0978 581.4500228 368.295893 570.185 373.5802901 422.0136 669.2872 29160347 exoglucanase Carbon cycling Carbon degradation Cellulose Exidia glandulosa superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Auriculariales;family:Exidiaceae;genus:Exidia; 1744.7345 1664.6258 2964.572 1338.8646 1610.859 1070.3916 1090.93335 4474.7438 1233.02245 1245.69 2978.4983 1377.13485 73762986 nirK Nitrogen Denitrification nitrifying uncultured bacterium superkingdom:Bacteria; 634.2462 793.4025 927.7064 566.7753335 1013.2287 1485.8762 876.2404 872.482 680.7179 626.2492793 85361889 mcrA Carbon cycling Methane Methane production uncultured methanogenic archaeon superkingdom:Archaea;phylum:Euryarchaeota; 2351.74 1457.1876 1385.7874 2640.0062 2773.799 2081.9003 2977.7284 1326.592 1478.7393 1463.3185 1721.483 1181.4077 111018644 nmoA Organic Remediation Aromatics Nitoaromatics Rhodococcus sp. RHA1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardiaceae;genus:Rhodococcus;species:Rhodococcus jostii; 1032.8631 684.4918 684.0537 1351.3841 812.947 684.5044 608.335 636.5637 882.4535 863.8589 707.7647511 544.0482 281195015 sir Sulphur sulfite reductase Cylindrospermopsis raciborskii CS-505 superkingdom:Bacteria;phylum:Cyanobacteria;order:Nostocales;family:Nostocaceae;genus:Cylindrospermopsis;species:Cylindrospermopsis raciborskii; 3236.5523 2984.8799 3560.0657 3990.3766 2851.6279 3426.9043 3189.5377 3472.5221 2650.1447 3356.2104 3346.9636 3539.4991 62084128 nirS Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1691.8784 1455.735 1730.0825 1984.4426 609.9651145 1317.634 1208.2738 1245.0213 1342.4118 1002.7472 1226.6963 822.8286 311330699 phospholipase_D_fungi Fungi function carbon degradation Pyrenophora teres f. teres 0-1 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora teres; 492.2265 1033.9054 482.6979557 786.1283 652.7187927 969.1375 775.0318 596.4138 893.52 1092.5589 927.8811 219858049 ureC Nitrogen Ammonification Arthrobacter chlorophenolicus A6 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Micrococcaceae;genus:Arthrobacter;species:Arthrobacter chlorophenolicus; 1783.0569 892.5778 1241.8902 1064.7086 1413.3765 970.7827 1131.4691 1279.7242 1154.7125 1143.9693 14808.47588 980.7369 194344082 sigma_24 Stress Sigma factors Streptomyces sp. Mg1 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces; 5144.4154 4661.24585 3497.13885 5512.7264 2530.93685 4550.94415 3810.0598 3144.55085 3729.9894 4211.0189 3153.4935 2826.17225 297546720 sped_bac soil_benifit Ktedonobacter racemifer DSM 44963 superkingdom:Bacteria;phylum:Chloroflexi;class:Ktedonobacteria;order:Ktedonobacterales;family:Ktedonobacteraceae;genus:Ktedonobacter;species:Ktedonobacter racemifer; 3209.2445 1042.581478 1456.061531 1694.970276 1945.0588 1743.1404 1222.33055 1635.614 1064.4565 1344.3233 4549.7554 1427.040277 118617498 pimF Organic Remediation Aromatics Aromatic carboxylic acid Mycobacterium ulcerans Agy99 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium ulcerans; 3697.476057 3754.6576 4206.3677 3066.2663 2704.701 4259.491 3469.2736 4024.04527 4791.42885 4141.625 1787.46655 4853.8771 242787262 katE Stress Oxygen stress Talaromyces stipitatus ATCC 10500 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus; 2804.5696 1305.7934 2141.3027 3281.8174 1221.6387 1658.8318 1704.2694 1433.9447 2016.2794 2214.8764 1894.6283 1592.1285 34102804 acetylglucosaminidase Carbon cycling Carbon degradation Chitin Chromobacterium violaceum ATCC 12472 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Chromobacterium;species:Chromobacterium violaceum; 3219.1575 2407.0942 1881.2786 4087.5195 2491.5484 2597.7427 5578.224 1460.9252 2354.2655 1898.1959 1913.6798 1878.4068 83572402 sigma_38 Stress Sigma factors Moorella thermoacetica ATCC 39073 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Thermoanaerobacterales;family:Thermoanaerobacteraceae;genus:Moorella;species:Moorella thermoacetica; 3051.1195 6617.7314 4687.3848 5064.9749 4221.2268 3869.155873 5627.1904 4868.0721 7122.2645 4554.693258 2587.3056 7366.9381 46307866 dsrA Sulphur sulfite reductase uncultured sulfate-reducing bacterium superkingdom:Bacteria; 574.2441 573.4989 753.5481 700.9342 533.0638497 504.4149353 209401588 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 3152.4124 2832.6446 3382.9748 2311.923 3851.4211 2949.0061 3657.1559 2057.0848 2461.793 2459.9688 2576.0621 2930.9913 165931816 superoxide_dismutase_fungi Fungi function virulence Kluyveromyces marxianus superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Saccharomycetes;order:Saccharomycetales;family:Saccharomycetaceae;genus:Kluyveromyces; 1609.0952 807.9417 1244.4491 1768.4463 1303.2785 770.0694 1087.1252 1114.5251 758.1244 854.6354 1187.5121 1247.5839 167669118 Al Metal Resistance Aluminum Anaerotruncus colihominis DSM 17241 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Anaerotruncus;species:Anaerotruncus colihominis; 4450.8186 3705.637 4967.5461 3696.236 3375.8022 4808.0726 5043.0118 3474.7372 4027.7362 4206.0331 5252.8354 4204.5842 148555550 benD Organic Remediation Aromatics Aromatic carboxylic acid Sphingomonas wittichii RW1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Sphingomonadales;family:Sphingomonadaceae;genus:Sphingomonas;species:Sphingomonas wittichii; 1400.1961 893.7501 1030.7623 1774.6239 541.956 558.3822 1037.1667 812.1172 1086.0601 769.5079762 1336.6931 147919060 alkK Organic Remediation Others uncultured methanogenic archaeon RC-I superkingdom:Archaea;phylum:Euryarchaeota; 490.5637568 981.5973 713.949228 788.1817933 623.8624298 986.9654 1285.9502 618.3589 924.879 898.6424 1028.3744 15605964 fnr Stress Oxygen stress Aquifex aeolicus VF5 superkingdom:Bacteria;phylum:Aquificae;class:Aquificae;order:Aquificales;family:Aquificaceae;genus:Aquifex;species:Aquifex aeolicus; 1094.2621 522.2745645 915.4604 750.6256636 637.5669289 434.9292285 837.8260606 705.9372 527.9386 915.6496252 615.7747078 53756342 nifH Nitrogen Nitrogen fixation Methylococcus capsulatus str. Bath superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Methylococcales;family:Methylococcaceae;genus:Methylococcus;species:Methylococcus capsulatus; 1725.889 2329.1225 1694.577 1588.1321 2365.2589 2064.8501 2110.7742 1235.4105 2021.8709 2210.7114 1796.0264 116623185 sigma_24 Stress Sigma factors Solibacter usitatus Ellin6076 superkingdom:Bacteria;phylum:Acidobacteria;class:Solibacteres;order:Solibacterales;family:Solibacteraceae;genus:Candidatus Solibacter;species:Candidatus Solibacter usitatus; 3132.0356 2471.4059 3408.6225 3393.9453 3144.2304 2567.2618 2222.0469 2337.2261 2083.9015 2853.1954 4096.8676 2286.0653 82568129 gyrB other category gyrB Thermoactinomyces vulgaris superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Thermoactinomycetaceae;genus:Thermoactinomyces; 1314.2831 2433.7389 1004.6203 1255.5288 5827.5735 1785.8107 4222.3973 1112.8426 2818.7164 1755.0979 2168.1244 1027.111 238845584 sulfate_transporter Fungi function Sulfur Microsporum canis CBS 113480 superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Arthrodermataceae;genus:Arthroderma;species:Arthroderma otae; 2491.0464 14136.231 2702.9921 2396.2998 3292.6457 2120.6072 1931.3799 2401.3424 1797.792 2306.3967 3997.6219 2764.3904 221081731 Arylest Organic Remediation Aromatics Other aromatics Variovorax paradoxus S110 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Variovorax;species:Variovorax paradoxus; 5643.2036 6224.8147 7456.0663 6184.3366 8772.5771 5191.5818 5637.0778 3944.8671 5133.7095 4529.1789 8411.4461 5220.6544 218463634 nhh Organic Remediation Aromatics Nitoaromatics Rhizobium etli Kim 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Rhizobiaceae;genus:Rhizobium;species:Rhizobium etli; 683.1034159 1241.762 1677.4931 731.2823604 1040.0603 1151.2782 1450.225 1020.6449 1197.8809 826.8306746 1338.2311 115607477 alkB Organic Remediation Other Hydrocarbons uncultured bacterium superkingdom:Bacteria; 1042.2791 1330.3865 856.8846 923.0351 889.0695 1295.2444 1236.5479 985.2999 1118.9619 1495.6901 1149.6493 1028.7589 76803790 alkB Organic Remediation Other Hydrocarbons Ralstonia sp. PT11 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia; 4430.8582 1972.5221 1705.8888 2456.925 2733.6996 1749.2126 2353.7481 1701.5218 2598.9476 2626.7844 1692.1249 1619.2224 62433256 carA Organic Remediation Aromatics Heterocyclic aromatics Nocardioides sp. IC177 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Nocardioidaceae;genus:Nocardioides; 2234.8656 5417.4974 3829.4388 3769.2986 2342.4506 5320.0114 4656.6715 3744.8319 5807.4258 5997.9356 1670.5748 5080.2549 262403150 hly virulence hemolysin Vibrio sp. RC586 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Vibrionales;family:Vibrionaceae;genus:Vibrio; 2319.9189 908.9774 1304.5408 2537.5076 1534.8123 1314.4184 2133.577 712.7035042 1205.0359 1615.5731 32063.07251 1823.5735 91977212 czcA Metal Resistance "Cadmium,Cobalt,Zinc" Rhodopseudomonas palustris BisB5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1433.0381 2101.7953 2951.1666 1265.2952 2282.3894 2241.2481 3366.6582 2597.2235 2123.5014 3028.8617 111615430 ZntA Metal Resistance Zinc Verminephrobacter eiseniae EF01-2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Verminephrobacter;species:Verminephrobacter eiseniae; 2245.1682 1988.1062 2213.3459 2170.3591 3189.0887 2053.2291 1906.4092 1994.3847 1587.8083 1866.271 3855.9729 2325.2162 219952012 nhh Organic Remediation Aromatics Nitoaromatics Methylobacterium nodulans ORS 2060 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium nodulans; 6668.2356 2386.5787 4277.4149 5143.7767 3748.0537 3251.4671 3983.0595 4064.7358 3772.7294 4862.6873 4460.9845 2667.2982 167032310 SMR_antibiotics Antibiotic resistance transporter Pseudomonas putida GB-1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas putida; 965.5538 1028.9996 1120.9071 1599.6654 1071.0621 782.5927 922.3669 569.2518 1055.778 1202.4145 1270.7093 1007.9132 226721443 iro virulence Iron oxidation Azotobacter vinelandii DJ superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Azotobacter;species:Azotobacter vinelandii; 1383.0028 764.1838 839.1028 1525.8495 894.6057 20139.51123 1891.6355 956.6007 1069.7684 1129.8214 1019.9165 952.9563 209525543 grpE Stress Heat shock Arthrospira maxima CS-328 superkingdom:Bacteria;phylum:Cyanobacteria;order:Oscillatoriales;genus:Arthrospira;species:Arthrospira maxima; 531.9593 637.8389 459.0798959 395.9345332 328.0590482 689.5060542 383.831587 120595970 gyrB other category gyrB Polaromonas naphthalenivorans CJ2 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas;species:Polaromonas naphthalenivorans; 5760.884 8933.8182 6838.0218 6161.8955 4778.1822 7356.9083 11616.1289 7794.9457 7383.2706 6740.6831 6071.2335 4423.6564 255037838 obgE Stress Radiation stress Dyadobacter fermentans DSM 18053 superkingdom:Bacteria;phylum:Bacteroidetes;class:Cytophagia;order:Cytophagales;family:Cytophagaceae;genus:Dyadobacter;species:Dyadobacter fermentans; 922.1138 537.9779 854.1366 639.3215 769.4229 928.7487 553.5109 779.139 480.4932643 179347798 ureC Nitrogen Ammonification Methylobacterium populi BJ001 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 1557.5152 1075.3697 1235.8999 1725.08 1750.3443 1437.0151 1180.9517 2886.5301 1608.6599 1525.3928 1874.5754 23494621 GCoADH Organic Remediation Aromatics Aromatic carboxylic acid Corynebacterium efficiens YS-314 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium efficiens; 936.5938 1445.9869 1438.3622 1165.5361 1222.1317 1415.9018 6940.652887 1165.8593 1374.0037 1844.798 1001.1052 1361.631 2588997 exaA Organic Remediation Chlorinated solvents Hyphomicrobium methylovorum superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Hyphomicrobiaceae;genus:Hyphomicrobium; 788.946 604.0368516 616.0690919 740.0499 694.7345 1165.6619 861.0374 796.7639 518.4694 17544988 pcc Carbon cycling Carbon fixation Ralstonia solanacearum GMI1000 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 1139.2469 2661.614 2601.4338 1084.255 3208.4843 1547.9309 1870.668 2609.7659 2080.9893 2877.9737 2634.7983 145223409 CadA Metal Resistance Cadmium Mycobacterium gilvum PYR-GCK superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Mycobacteriaceae;genus:Mycobacterium;species:Mycobacterium gilvum; 976.7362 1029.178 1208.3039 1000.2344 660.0182011 1245.769 798.6949 1566.7528 666.02795 882.5348 1334.4226 1002.6537 48527114 mcrA Carbon cycling Methane Methane production uncultured Methanomicrobiales archaeon superkingdom:Archaea;phylum:Euryarchaeota;class:Methanomicrobia;order:Methanomicrobiales; 905.5166763 1635.3413 1361.4629 1223.8647 1244.3902 1720.3021 1528.6716 1069.6667 1355.046887 2000.2573 1677.086 88919495 nhh Organic Remediation Aromatics Nitoaromatics Acidiphilium cryptum JF-5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Acidiphilium;species:Acidiphilium cryptum; 18783.40296 2886.6348 3637.0669 4551.03 2519.7223 3782.1461 3742.0356 3789.5451 3710.8502 3760.9607 1861.5464 3747.1185 2370410 napA Nitrogen Dissimilatory N reduction Pseudomonas sp. superkingdom:Bacteria;phylum:Proteobacteria; 801.2097 815.7402 694.3275 1921.1318 471.7627352 1666.6011 374.0604007 456.3704 465.1608 622.3226 194359405 merF Metal Resistance Mercury Pseudomonas aeruginosa superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas; 3330.100608 8478.590351 3510.82775 3286.216201 6283.473002 5265.838593 9492.062582 3425.38805 6366.794805 4756.001965 7793.3892 3067.2093 6073782 chitin_synthase Fungi function major biomolecule Tuber magnatum superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Pezizomycetes;order:Pezizales;family:Tuberaceae;genus:Tuber; 1511.2812 780.5835 709.8613 1173.5765 1007.1305 809.9727 636.2535 1006.6034 753.127 583.7038 1516.6732 837.0004 121535083 pstA Stress Phosphate limitation Thermosinus carboxydivorans Nor1 superkingdom:Bacteria;phylum:Firmicutes;class:Negativicutes;order:Selenomonadales;family:Veillonellaceae;genus:Thermosinus;species:Thermosinus carboxydivorans; 493.0890432 895.8462 934.9325 595.7054 848.0301077 905.17695 868.28475 1145.1731 1104.7152 916.3021 1085.9601 888.44175 145555481 nagG Organic Remediation Aromatics Aromatic carboxylic acid Rhodobacter sphaeroides ATCC 17025 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Rhodobacter;species:Rhodobacter sphaeroides; 4313.0704 5338.8758 5718.9176 3817.1714 5743.1467 4515.1089 5199.3624 3465.4653 4868.9525 4176.3303 7280.1516 4597.4255 260587123 pstA Stress Phosphate limitation Blautia hansenii DSM 20583 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;genus:Blautia;species:Blautia hansenii; 443.7250662 656.1906 459.8272703 791.3471 834.0673 646.9667 509.3148 626.5942 757.4956756 116049493 ZntA Metal Resistance Zinc Pseudomonas aeruginosa UCBPP-PA14 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Pseudomonas;species:Pseudomonas aeruginosa; 7868.7203 8250.6644 12616.5223 4311.3507 4696.7826 5471.0998 6139.3132 11453.2805 7696.1144 6284.3215 7361.0905 11110.3626 254043608 ureC Nitrogen Ammonification Hirschia baltica ATCC 49814 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Hyphomonadaceae;genus:Hirschia;species:Hirschia baltica; 831.1368 689.424927 744.5234 823.1581466 1449.0568 584.5153 806.8403 697.1438 551.7776466 167348367 bphA Organic Remediation Aromatics Polycyclic aromatics Caulobacter sp. K31 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Caulobacterales;family:Caulobacteraceae;genus:Caulobacter; 2279.80335 1675.4867 1366.60985 2349.3926 1152.18045 2396.64795 1600.6416 1995.11095 1671.78545 1689.5508 1435.3379 2103.29455 158520779 arsM Metal Resistance Arsenic Desulfococcus oleovorans Hxd3 superkingdom:Bacteria;phylum:Proteobacteria;class:Deltaproteobacteria;order:Desulfobacterales;family:Desulfobacteraceae;genus:Desulfococcus;species:Desulfococcus oleovorans; 983.8419 932.33455 796.8074 1032.4235 1028.479 945.2224 1061.1222 837.9062 968.2712 800.1766 1003.1954 754.5788 29610878 nmoA Organic Remediation Aromatics Nitoaromatics Streptomyces avermitilis MA-4680 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Streptomycetaceae;genus:Streptomyces;species:Streptomyces avermitilis; 1250.0767 532.4617404 1111.3487 1025.18 783.4253 795.2309 632.9964292 648.0114 951.9509 823.2268 209544810 pstB Stress Phosphate limitation Gluconacetobacter diazotrophicus PAl 5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconacetobacter;species:Gluconacetobacter diazotrophicus; 1675.0209 1550.597575 1681.88916 1570.7027 1478.851964 1658.1361 1686.0162 1591.1748 1786.3528 1443.731891 86573243 CODH Carbon cycling Carbon fixation Rhodopseudomonas palustris HaA2 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Rhodopseudomonas;species:Rhodopseudomonas palustris; 1260.1241 1900.0552 1836.875 1228.9145 1167.1301 1911.7875 1579.9436 1443.6161 2179.7606 1840.0746 1108.3511 1713.1242 116695290 pimF Organic Remediation Aromatics Aromatic carboxylic acid Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 1887.9362 1449.7078 1291.8915 1603.9391 2314.2768 1342.7007 1594.8205 1781.9547 1698.9974 1787.5587 2157.5991 120865911 iro virulence Iron oxidation Neisseria meningitidis FAM18 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Neisseriales;family:Neisseriaceae;genus:Neisseria;species:Neisseria meningitidis; 18355.8521 9927.2024 14708.2793 17268.9627 12483.3754 13014.2737 12061.7243 14594.0085 12674.3223 14392.2805 11969.2496 14305.6054 88866357 dsrA Sulphur sulfite reductase bacterium LS2003 superkingdom:Bacteria; 1140.8677 717.0363 833.1561 1539.2183 674.7679 646.7488 817.111 759.1728 601.7376 453.3582346 56420884 pcc Carbon cycling Carbon fixation Geobacillus kaustophilus HTA426 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Geobacillus;species:Geobacillus kaustophilus; 1627.7258 2614.4155 2095.9105 1787.5407 5143.5893 1980.8556 2514.618 1314.4393 1907.9793 1506.8565 2740.0541 1605.0232 85712515 pilin virulence pilin Idiomarina baltica OS145 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Idiomarinaceae;genus:Idiomarina;species:Idiomarina baltica; 839.0753 1720.4871 1094.6343 1409.4205 846.5812 2212.3191 1254.9117 1094.3957 1487.4061 1469.7281 618.4412839 1633.7375 255321510 ppk Phosphorus Phosphorus utilization Campylobacter showae RM3277 superkingdom:Bacteria;phylum:Proteobacteria;class:Epsilonproteobacteria;order:Campylobacterales;family:Campylobacteraceae;genus:Campylobacter;species:Campylobacter showae; 933.7327 1066.1059 990.8369 1412.3527 1077.2266 1391.479893 864.233 1210.9885 981.1401 225563059 ureC Nitrogen Ammonification Ajellomyces capsulatus G186AR superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Ajellomycetaceae;genus:Ajellomyces;species:Ajellomyces capsulatus; 708.0701 678.3754 578.0027 643.6467 777.1879266 634.6701 498.1864 510.3283 501.2508 617.7205458 655.4313 62390048 Catechol Organic Remediation Aromatics Other aromatics Corynebacterium glutamicum ATCC 13032 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Corynebacteriaceae;genus:Corynebacterium;species:Corynebacterium glutamicum; 4808.5744 3030.9315 3420.0069 3390.7949 3505.9594 3075.3119 3382.1457 3059.488 3701.4495 3415.9733 4055.3771 3441.1206 58002723 sod_CuZn soil_benifit Gluconobacter oxydans 621H superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodospirillales;family:Acetobacteraceae;genus:Gluconobacter;species:Gluconobacter oxydans; 5530.923 1973.8983 3729.538 5226.8796 2798.0103 2958.593 3002.4812 3345.9114 2888.9479 4042.5674 2928.0946 3438.4153 56963059 cydA Stress Oxygen limitation Bacillus clausii KSM-K16 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Bacillales;family:Bacillaceae;genus:Bacillus;species:Bacillus clausii; 456.0291214 827.9827852 398.843798 627.8278763 516.4672 497.8897 556.5976847 260463469 hrcA Stress Heat shock Mesorhizobium opportunistum WSM2075 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Mesorhizobium;species:Mesorhizobium opportunistum; 765.1037 1678.5386 1976.1051 1079.4198 1105.3599 1330.975 1882.0694 2059.663 1884.2388 1952.409 1239.7897 1797.482 133911424 endochitinase Carbon cycling Carbon degradation Chitin Saccharopolyspora erythraea NRRL 2338 superkingdom:Bacteria;phylum:Actinobacteria;class:Actinobacteria;order:Actinomycetales;family:Pseudonocardiaceae;genus:Saccharopolyspora;species:Saccharopolyspora erythraea; 1856.9076 1645.5354 1876.844 1170.0974 1548.6717 1394.5692 1483.6166 2164.0261 1439.3076 1438.4509 1725.9515 2003.0278 149357992 pimF Organic Remediation Aromatics Aromatic carboxylic acid Marinobacter algicola DG893 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Alteromonadaceae;genus:Marinobacter;species:Marinobacter algicola; 1210.653 758.4751 841.8508 1340.3302 1301.1171 12310.90904 808.674 545.4306 1056.1508 1057.9318 1594.7772 1161.5644 87331960 arhA Organic Remediation Aromatics Heterocyclic aromatics uncultured bacterium superkingdom:Bacteria; 2272.1671 2158.6101 2117.1381 1910.005733 3405.941533 2387.706533 1836.6664 1979.222033 1911.7846 2165.234133 3026.131033 2464.6819 179346927 nhh Organic Remediation Aromatics Nitoaromatics Methylobacterium populi BJ001 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Methylobacteriaceae;genus:Methylobacterium;species:Methylobacterium populi; 4325.6699 3356.5037 4549.4341 3722.8229 2744.8857 3578.6807 3270.5175 6224.8763 4167.3021 3391.5411 3681.5543 4575.4949 161380716 ppx Phosphorus Phosphorus utilization Oceanibulbus indolifex HEL-45 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Oceanibulbus;species:Oceanibulbus indolifex; 2836.7937 3977.1681 2819.5697 2546.7397 3889.4729 2672.8831 2422.558 2811.8467 2936.4406 2240.1684 4316.3083 2854.2824 91788856 hmgB Organic Remediation Aromatics Aromatic carboxylic acid Polaromonas sp. JS666 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Comamonadaceae;genus:Polaromonas; 1882.8991 887.8246 1706.8075 1631.506 952.4762 827.554 634.9175 734.943 906.202 1031.32808 1311.7139 190686311 ppx Phosphorus Phosphorus utilization Cellvibrio japonicus Ueda107 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Pseudomonadales;family:Pseudomonadaceae;genus:Cellvibrio;species:Cellvibrio japonicus; 832.0234 502.3285757 401.2774415 207744735 endoglucanase Carbon cycling Carbon degradation Cellulose Ralstonia solanacearum IPO1609 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Ralstonia;species:Ralstonia solanacearum; 1929.0122 1806.5885 2126.0799 1874.6022 2545.5073 1694.4278 3302.4621 1709.789 1871.4948 1725.9758 1873.5587 1742.4977 301101483 glucanase_inhibitor_Oomycetes soil_borne_pathogen oomycete virulence Phytophthora infestans T30-4 superkingdom:Eukaryota;order:Peronosporales;genus:Phytophthora;species:Phytophthora infestans; 1860.9776 920.5269127 1713.0809 1258.967845 880.4617 1294.0023 1372.1282 1059.7503 1173.9847 1928.9114 1022.644567 113529862 pcpA Organic Remediation Aromatics Chlorinated aromatics Ralstonia eutropha H16 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus necator; 1212.47975 959.2022 1093.6892 1026.23225 1683.2086 1009.1531 981.8572 1589.4544 1059.2669 1041.7572 1358.8436 1026.18405 88783801 Arylest Organic Remediation Aromatics Other aromatics Robiginitalea biformata HTCC2501 superkingdom:Bacteria;phylum:Bacteroidetes;class:Flavobacteria;order:Flavobacteriales;family:Flavobacteriaceae;genus:Robiginitalea;species:Robiginitalea biformata; 1592.3048 906.4162 1065.9478 1229.9145 1102.5349 1049.6323 753.2384 1114.2951 721.803 880.1284 2016.8414 1315.4217 199593971 narG Nitrogen Denitrification uncultured bacterium superkingdom:Bacteria; 1302.2881 2068.1932 1459.7934 1108.1161 2943.5248 1876.2214 1788.1053 2337.4319 1800.2266 2367.2761 1141.529 1680.8395 85695040 AceB Carbon cycling Carbon degradation Others Idiomarina baltica OS145 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Alteromonadales;family:Idiomarinaceae;genus:Idiomarina;species:Idiomarina baltica; 390.4119709 522.5085 433.4986166 516.3171906 538.3666 493.9659868 505.35415 596.4503 120613947 pstC Stress Phosphate limitation Bartonella bacilliformis KC583 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bartonellaceae;genus:Bartonella;species:Bartonella bacilliformis; 582.8408 517.5261 639.9118 830.4809 651.7801 1817.3658 756.2722 628.5371 408.9891652 189209776 ABC_multidrug_fungi Fungi function metal resistance Pyrenophora tritici-repentis Pt-1C-BFP superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Pyrenophora;species:Pyrenophora tritici-repentis; 1868.849 1182.8022 1015.2777 2018.3029 944.6968 1467.167 3214.5886 1496.5238 1526.1272 1448.8357 1095.3057 1176.258 193089985 BpH Organic Remediation Aromatics Aromatic carboxylic acid Cochliobolus lunatus superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Dothideomycetes;order:Pleosporales;family:Pleosporaceae;genus:Cochliobolus; 26466.07654 4720.4923 3462.4331 2781.2824 3409.4933 2644.3913 2952.6889 4692.7296 1762.816705 3820.8575 5244.4989 3020.4026 291504302 cat_bac soil_benifit Ruminococcus albus 8 superkingdom:Bacteria;phylum:Firmicutes;class:Clostridia;order:Clostridiales;family:Ruminococcaceae;genus:Ruminococcus;species:Ruminococcus albus; 766.6349 1351.3862 1238.9677 855.2267 1435.34 1196.838 1125.891 1286.0659 914.3982 1394.2042 88643171 dsrB Sulphur sulfite reductase uncultured prokaryote 1115.4986 1279.3016 1450.3428 989.5229 1372.5187 965.907 975.1529 2171.8454 1704.3559 1034.0467 2477.345 1670.7187 72121142 CopA Metal Resistance Copper Ralstonia eutropha JMP134 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Cupriavidus;species:Cupriavidus pinatubonensis; 3035.1485 2660.6455 1742.3829 2831.3332 2382.8724 1873.9032 1652.8025 1467.3283 1922.2259 1929.9868 4843.4081 1938.4446 189426916 contractile_tail_sheath_protein Bacteria phage STRUCTURAL Ralstonia phage RSL1 superkingdom:Viruses;order:Caudovirales;family:Myoviridae; 2661.5291 1984.0668 1587.4501 2369.4389 2049.2983 1489.2125 1502.7489 2050.2701 1427.3209 1945.2513 2704.81 1877.061 177840701 grpE Stress Heat shock Opitutus terrae PB90-1 superkingdom:Bacteria;phylum:Verrucomicrobia;class:Opitutae;family:Opitutaceae;genus:Opitutus;species:Opitutus terrae; 1040.224 900.8374 1057.913048 629.9841465 747.8944609 559.9483665 110285974 cap virulence capsule Chelativorans sp. BNC1 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Phyllobacteriaceae;genus:Chelativorans; 654.3947 644.0215 501.2940184 650.0982 1095.463 711.6501 646.90365 973.3893 735.1061 727.7845 1002.6668 708.4862 148261202 glycosyl_transferase_EPS Bioleaching EPS Acidiphilium cryptum JF-5 1101.8245 1271.6306 1168.204 1134.8262 996.7010466 1011.1946 1513.3589 1827.9872 1171.7665 1784.4768 1270.3384 170100447 phenol_oxidase Carbon cycling Carbon degradation Lignin Laccaria bicolor S238N-H82 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Tricholomataceae;genus:Laccaria;species:Laccaria bicolor; 525.058095 861.5496 924.5834424 828.6232 848.143 710.424 743.1672 957.6794 897.1069 126728937 pcc Carbon cycling Carbon fixation Sagittula stellata E-37 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhodobacterales;family:Rhodobacteraceae;genus:Sagittula;species:Sagittula stellata; 1861.0314 1039.2318 1454.5592 1730.107 1727.7635 1075.0879 1289.7889 1214.9543 1049.3944 1505.1257 1840.4047 1799.9401 118660447 CopA Metal Resistance Copper Burkholderia multivorans ATCC 17616 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia multivorans; 3786.8064 2725.6453 1689.2265 2697.3029 3564.734 1813.076 3613.959 1695.9538 1757.7895 2475.9704 2590.1165 3013.7699 186472216 MFS_antibiotic Antibiotic resistance transporter Burkholderia phymatum STM815 superkingdom:Bacteria;phylum:Proteobacteria;class:Betaproteobacteria;order:Burkholderiales;family:Burkholderiaceae;genus:Burkholderia;species:Burkholderia phymatum; 10005.5168 10839.1233 17270.9751 7000.5995 7315.9918 12736.1017 10262.4815 14765.4574 14397.4679 12383.3916 5258.0968 13855.4316 121999080 sigma_32 Stress Sigma factors Halorhodospira halophila SL1 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Halorhodospira;species:Halorhodospira halophila; 1711.5836 3036.5509 2553.9188 1987.7574 4101.7059 2308.4133 2371.0452 2363.2866 2776.3842 2515.0753 2151.3552 2264.8625 148243938 NAD_dependent_epimerase_dehydratase_family_protein_EPS Bioleaching EPS Acidiphilium cryptum JF-5 1948.892 1329.915 1187.3889 1810.42925 776.1465 1183.2443 865.03295 733.72465 1228.94535 1293.1977 2368.5616 1017.91035 299739871 chitin_deacetylase_fungi Fungi function carbon degradation Coprinopsis cinerea okayama7#130 superkingdom:Eukaryota;kingdom:Fungi;phylum:Basidiomycota;class:Agaricomycetes;order:Agaricales;family:Psathyrellaceae;genus:Coprinopsis;species:Coprinopsis cinerea; 2081.5359 567.8975 1341.0785 1959.4583 1410.6463 1232.0242 1437.3572 1449.9708 1092.5188 1462.5146 1564.29 1280.2119 259168809 SMR_antibiotics Antibiotic resistance transporter Lactobacillus antri DSM 16041 superkingdom:Bacteria;phylum:Firmicutes;class:Bacilli;order:Lactobacillales;family:Lactobacillaceae;genus:Lactobacillus;species:Lactobacillus antri; 2632.48175 2090.71565 2735.248 2708.53485 2893.3199 2448.40415 1959.1321 1862.93835 1931.4519 2147.6991 4530.29545 2465.42345 56798867 catechol_B Organic Remediation Aromatics Other aromatics uncultured bacterium superkingdom:Bacteria; 1369.9197 1057.8232 1416.3785 1612.1302 3999.797702 1154.7301 2225.8436 1510.71 1223.2199 1093.2066 1082.7889 1270.4894 219996663 dsrA Sulphur sulfite reductase Thioalkalivibrio sp. HL-EbGR7 superkingdom:Bacteria;phylum:Proteobacteria;class:Gammaproteobacteria;order:Chromatiales;family:Ectothiorhodospiraceae;genus:Thioalkalivibrio;species:Thioalkalivibrio sulfidophilus; 1677.1835 1956.9889 1725.7933 2082.0238 3196.8621 1612.7216 1803.6359 1075.1136 2046.357 2129.5201 1717.1585 1915.0721 209871850 oxyR Stress Oxygen stress Oligotropha carboxidovorans OM5 superkingdom:Bacteria;phylum:Proteobacteria;class:Alphaproteobacteria;order:Rhizobiales;family:Bradyrhizobiaceae;genus:Oligotropha;species:Oligotropha carboxidovorans